Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-06 22:25:21 (18472): vboxwrapper version 26210
2026-03-06 22:25:21 (18472): BOINC client version: 8.2.8
2026-03-06 22:25:21 (18472): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2026-03-06 22:25:22 (18472): Successfully copied 'init_data.xml' to the shared directory.
2026-03-06 22:25:22 (18472): Create VM. (boinc_69ca90c22e78b81b, slot#3)
2026-03-06 22:25:23 (18472): Setting Memory Size for VM. (4500MB)
2026-03-06 22:25:23 (18472): Setting CPU Count for VM. (5)
2026-03-06 22:25:23 (18472): Setting Chipset Options for VM.
2026-03-06 22:25:23 (18472): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-06 22:25:24 (18472): Setting Boot Options for VM.
2026-03-06 22:25:24 (18472): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-06 22:25:24 (18472): Enabling VM Network Access.
2026-03-06 22:25:25 (18472): Disabling USB Support for VM.
2026-03-06 22:25:25 (18472): Disabling COM Port Support for VM.
2026-03-06 22:25:25 (18472): Disabling LPT Port Support for VM.
2026-03-06 22:25:26 (18472): Disabling Audio Support for VM.
2026-03-06 22:25:26 (18472): Disabling Clipboard Support for VM.
2026-03-06 22:25:26 (18472): Disabling Drag and Drop Support for VM.
2026-03-06 22:25:26 (18472): Adding storage controller(s) to VM.
2026-03-06 22:25:27 (18472): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-06 22:25:28 (18472): Adding VirtualBox Guest Additions to VM.
2026-03-06 22:25:28 (18472): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-06 22:25:28 (18472): forwarding host port 61632 to guest port 80
2026-03-06 22:25:29 (18472): Enabling remote desktop for VM.
2026-03-06 22:25:29 (18472): Required extension pack not installed, remote desktop not enabled.
2026-03-06 22:25:29 (18472): Enabling shared directory for VM.
2026-03-06 22:25:29 (18472): Starting VM using VBoxManage interface. (boinc_69ca90c22e78b81b, slot#3)
2026-03-06 22:25:34 (18472): Successfully started VM. (PID = '12560')
2026-03-06 22:25:34 (18472): Reporting VM Process ID to BOINC.
2026-03-06 22:25:34 (18472): Guest Log: BIOS: VirtualBox 6.1.12
2026-03-06 22:25:34 (18472): Guest Log: CPUID EDX: 0x178bfbff
2026-03-06 22:25:34 (18472): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-06 22:25:34 (18472): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-06 22:25:34 (18472): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-06 22:25:34 (18472): Detected: Web Application Enabled (http://localhost:61632)
2026-03-06 22:25:34 (18472): Preference change detected
2026-03-06 22:25:34 (18472): Setting CPU throttle for VM. (70%)
2026-03-06 22:25:35 (18472): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-06 22:25:36 (18472): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-06 22:25:36 (18472): Guest Log: BIOS: Booting from Hard Disk...
2026-03-06 22:25:39 (18472): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-06 22:25:39 (18472): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-06 22:25:39 (18472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-06 22:25:49 (18472): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-06 22:25:49 (18472): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-06 22:26:01 (18472): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-06 22:26:01 (18472): Guest Log: 00:00:00.000255 main     Log opened 2026-03-06T22:25:59.905448000Z
2026-03-06 22:26:01 (18472): Guest Log: 00:00:00.000433 main     OS Product: Linux
2026-03-06 22:26:01 (18472): Guest Log: 00:00:00.000578 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-06 22:26:01 (18472): Guest Log: 00:00:00.000647 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-06 22:26:01 (18472): Guest Log: 00:00:00.000728 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-06 22:26:01 (18472): Guest Log: 00:00:00.000730 main     Process ID: 1325
2026-03-06 22:26:01 (18472): Guest Log: 00:00:00.000731 main     Package type: LINUX_64BITS_GENERIC
2026-03-06 22:26:01 (18472): Guest Log: 00:00:00.002435 main     5.2.32 r132073 started. Verbose level = 0
2026-03-06 22:26:02 (18472): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-06 22:26:02 (18472): Guest Log: [INFO] Mounting shared directory
2026-03-06 22:26:02 (18472): Guest Log: [INFO] Checking for init_data.xml
2026-03-06 22:26:07 (18472): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-06 22:26:07 (18472): Guest Log: [INFO] Detected branch: prod
2026-03-06 22:26:07 (18472): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-06 22:26:07 (18472): Guest Log: Copying input files
2026-03-06 22:26:11 (18472): Guest Log: 00:00:10.009823 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 694 676 000ns (GuestNow=1 772 853 971 604 791 000 ns GuestLast=1 772 835 959 910 115 000 ns fSetTimeLastLoop=true )
2026-03-06 22:26:13 (18472): Guest Log: Copied input files into RunAtlas.
2026-03-06 22:26:13 (18472): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-06 22:26:13 (18472): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-06 22:26:13 (18472): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-06 22:26:13 (18472): Guest Log: Further information can be found at the LHC@home message board.
2026-03-06 22:26:23 (18472): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-06 22:26:23 (18472): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-06 22:26:23 (18472): Guest Log: 2.6.3.0 1621 0 32192 156982 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-06 22:26:24 (18472): Guest Log: copied the webapp to /var/www
2026-03-06 22:26:24 (18472): Guest Log: ATHENA_PROC_NUMBER=5
2026-03-06 22:26:24 (18472): Guest Log: ATHENA_CORE_NUMBER=5
2026-03-06 22:26:25 (18472): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-06 22:26:25 (18472): Guest Log:  *** Starting ATLAS job. (PandaID=7043407562 taskID=48996069) ***
2026-03-06 23:50:30 (18472): VM state change detected. (old = 'running', new = 'paused')
2026-03-06 23:50:31 (18472): VM state change detected. (old = 'paused', new = 'running')
2026-03-07 00:05:41 (18472): Status Report: Elapsed Time: '6000.222435'
2026-03-07 00:05:41 (18472): Status Report: CPU Time: '20101.578125'
2026-03-07 01:45:47 (18472): Status Report: Elapsed Time: '12000.222435'
2026-03-07 01:45:47 (18472): Status Report: CPU Time: '42761.421875'
2026-03-07 01:54:46 (18472): Guest Log:  *** Job finished ***
2026-03-07 01:54:46 (18472): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-07 01:54:46 (18472): Guest Log: 2026-03-07 06:54:10,206 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-07 01:54:46 (18472): Guest Log: 2026-03-07 06:54:10,206 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-07 01:54:46 (18472): Guest Log: 2026-03-07 06:54:30,064 | INFO     | [monitor] cgroup control has ended
2026-03-07 01:54:46 (18472): Guest Log: 2026-03-07 06:54:30,237 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139875190380352)>', '<ExcThread(monitor, started 139874459969280)>']
2026-03-07 01:54:46 (18472): Guest Log: 2026-03-07 06:54:30,337 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-07 01:54:46 (18472): Guest Log: 2026-03-07 06:54:30,337 | INFO     | [monitor] control thread has ended
2026-03-07 01:54:46 (18472): Guest Log: 2026-03-07 06:54:35,322 | INFO     | all workflow threads have been joined
2026-03-07 01:54:46 (18472): Guest Log: 2026-03-07 06:54:35,323 | INFO     | end of generic workflow (traces error code: 0)
2026-03-07 01:54:46 (18472): Guest Log: 2026-03-07 06:54:35,323 | INFO     | traces error code: 0
2026-03-07 01:54:46 (18472): Guest Log: 2026-03-07 06:54:35,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-07 01:54:46 (18472): Guest Log: 2026-03-07 06:54:35,490 [wrapper] ==== pilot stdout END ====
2026-03-07 01:54:46 (18472): Guest Log: 2026-03-07 06:54:35,502 [wrapper] ==== wrapper stdout RESUME ====
2026-03-07 01:54:46 (18472): Guest Log: 2026-03-07 06:54:35,514 [wrapper] pilotpid: 6030
2026-03-07 01:54:46 (18472): Guest Log: 2026-03-07 06:54:35,525 [wrapper] Pilot exit status: 0
2026-03-07 01:54:46 (18472): Guest Log: 2026-03-07 06:54:35,651 [wrapper] pandaids: 7043407562
2026-03-07 01:54:46 (18472): Guest Log: 2026-03-07 06:54:35,727 [wrapper] cleanup supervisor_pilot 27694 6031
2026-03-07 01:54:46 (18472): Guest Log: 2026-03-07 06:54:35,738 [wrapper] Test setup, not cleaning
2026-03-07 01:54:46 (18472): Guest Log: 2026-03-07 06:54:35,747 [wrapper] apfmon messages muted
2026-03-07 01:54:46 (18472): Guest Log: 2026-03-07 06:54:35,757 [wrapper] ==== wrapper stdout END ====
2026-03-07 01:54:46 (18472): Guest Log: 2026-03-07 06:54:35,766 [wrapper] ==== wrapper stderr END ====
2026-03-07 01:54:46 (18472): Guest Log:  *** Error codes and diagnostics ***
2026-03-07 01:54:46 (18472): Guest Log:     "exeErrorCode": 0,
2026-03-07 01:54:46 (18472): Guest Log:     "exeErrorDiag": "",
2026-03-07 01:54:46 (18472): Guest Log:     "pilotErrorCode": 0,
2026-03-07 01:54:46 (18472): Guest Log:     "pilotErrorDiag": "",
2026-03-07 01:54:46 (18472): Guest Log:  *** Listing of results directory ***
2026-03-07 01:54:46 (18472): Guest Log: total 200184
2026-03-07 01:54:46 (18472): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  6 17:40 runpilot2-wrapper.sh
2026-03-07 01:54:46 (18472): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  6 17:41 queuedata.json
2026-03-07 01:54:46 (18472): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  6 17:41 pilot3.tar.gz
2026-03-07 01:54:46 (18472): Guest Log: -rwxr-xr-x. 1 atlas atlas      8459 Mar  7 03:26 init_data.xml
2026-03-07 01:54:46 (18472): Guest Log: -rwxr-xr-x. 1 atlas atlas    597938 Mar  7 03:26 input.tar.gz
2026-03-07 01:54:46 (18472): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  7 03:26 start_atlas.sh
2026-03-07 01:54:46 (18472): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  7 03:26 EVNT.48329618._000028.pool.root.1 -> /data/./ATLAS.root_0
2026-03-07 01:54:46 (18472): Guest Log: -rw-r--r--. 1 atlas atlas      2500 Mar  7 03:26 pandaJob.out
2026-03-07 01:54:46 (18472): Guest Log: -rw-------. 1 atlas atlas    999186 Mar  7 03:27 agis_schedconf.cvmfs.json
2026-03-07 01:54:46 (18472): Guest Log: -rw-------. 1 atlas atlas       428 Mar  7 03:28 workernode_map.json
2026-03-07 01:54:46 (18472): Guest Log: drwx------. 5 atlas atlas      4096 Mar  7 03:28 pilot3
2026-03-07 01:54:46 (18472): Guest Log: -rw-------. 1 atlas atlas 196962054 Mar  7 06:52 HITS.48996069._001361.pool.root.1
2026-03-07 01:54:46 (18472): Guest Log: -rw-------. 1 atlas atlas      1033 Mar  7 06:53 memory_monitor_summary.json
2026-03-07 01:54:46 (18472): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  7 06:53 agis_ddmendpoints.agis.ALL.json
2026-03-07 01:54:46 (18472): Guest Log: -rw-------. 1 atlas atlas    384884 Mar  7 06:53 log.48996069._001361.job.log.tgz.1
2026-03-07 01:54:46 (18472): Guest Log: -rw-------. 1 atlas atlas      6382 Mar  7 06:53 heartbeat.json
2026-03-07 01:54:46 (18472): Guest Log: -rw-------. 1 atlas atlas        95 Mar  7 06:54 pilot_heartbeat.json
2026-03-07 01:54:46 (18472): Guest Log: -rw-------. 1 atlas atlas      5059 Mar  7 06:54 pilotlog.txt
2026-03-07 01:54:46 (18472): Guest Log: -rw-------. 1 atlas atlas   1695358 Mar  7 06:54 log.48996069._001361.job.log.1
2026-03-07 01:54:46 (18472): Guest Log: -rw-------. 1 atlas atlas       357 Mar  7 06:54 output.list
2026-03-07 01:54:46 (18472): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  7 06:54 runtime_log
2026-03-07 01:54:46 (18472): Guest Log: -rw-------. 1 atlas atlas   2099200 Mar  7 06:54 result.tar.gz
2026-03-07 01:54:46 (18472): Guest Log: -rw-r--r--. 1 atlas atlas      8782 Mar  7 06:54 runtime_log.err
2026-03-07 01:54:46 (18472): Guest Log: -rw-------. 1 atlas atlas       667 Mar  7 06:54 Pt9KDmgLoI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmDATLDmBmzZWm.diag
2026-03-07 01:54:46 (18472): Guest Log: Looking for outputfile HITS.48996069._001361.pool.root.1
2026-03-07 01:54:46 (18472): Guest Log: HITS file was successfully produced
2026-03-07 01:54:46 (18472): Guest Log: -rw-------. 1 atlas atlas 196962054 Mar  7 06:52 /home/atlas/RunAtlas/HITS.48996069._001361.pool.root.1
2026-03-07 01:54:48 (18472): Guest Log: Successfully finished the ATLAS job!
2026-03-07 01:54:48 (18472): Guest Log: Copying the results back to the shared directory!
2026-03-07 01:54:48 (18472): Guest Log:  *** Contents of shared directory: ***
2026-03-07 01:54:48 (18472): Guest Log: total 717196
2026-03-07 01:54:48 (18472): Guest Log: -rwxrwxrwx. 1 root root 534715578 Mar  7 03:25 ATLAS.root_0
2026-03-07 01:54:48 (18472): Guest Log: -rwxrwxrwx. 1 root root 196962054 Mar  7  2026 HITS.pool.root.1
2026-03-07 01:54:48 (18472): Guest Log: -rwxrwxrwx. 1 root root      8459 Mar  7 03:25 init_data.xml
2026-03-07 01:54:48 (18472): Guest Log: -rwxrwxrwx. 1 root root    597938 Mar  6 21:16 input.tar.gz
2026-03-07 01:54:48 (18472): Guest Log: -rwxrwxrwx. 1 root root   2099200 Mar  7  2026 result.tar.gz
2026-03-07 01:54:48 (18472): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  6 21:16 start_atlas.sh
2026-03-07 01:54:48 (18472): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-07 01:54:48 (18472): VM Completion File Detected.
2026-03-07 01:54:48 (18472): Powering off VM.
2026-03-07 01:54:49 (18472): Successfully stopped VM.
2026-03-07 01:54:49 (18472): Deregistering VM. (boinc_69ca90c22e78b81b, slot#3)
2026-03-07 01:54:49 (18472): Removing network bandwidth throttle group from VM.
2026-03-07 01:54:49 (18472): Removing VM from VirtualBox.
2026-03-07 01:54:55 (18472): called boinc_finish(0)

</stderr_txt>
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