Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:34:20 (748162): wrapper (7.7.26015): starting
14:34:20 (748162): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 14:34:20] Arguments: --nthreads 4
[2026-03-09 14:34:20] Threads: 4
[2026-03-09 14:34:20] Checking for CVMFS
[2026-03-09 14:34:20] No cvmfs_config command found, will try listing directly
[2026-03-09 14:34:20] CVMFS is ok
[2026-03-09 14:34:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 14:34:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 14:34:20] Further information can be found at the LHC@home message board.
[2026-03-09 14:34:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 14:34:20] Checking for apptainer binary...
[2026-03-09 14:34:20] which: no apptainer in ((null))
[2026-03-09 14:34:20] apptainer is not installed, using version from CVMFS
[2026-03-09 14:34:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 14:34:20] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-03-09 14:34:20] apptainer works
[2026-03-09 14:34:20] Set ATHENA_PROC_NUMBER=4
[2026-03-09 14:34:20] Set ATHENA_CORE_NUMBER=4
[2026-03-09 14:34:20] Starting ATLAS job with PandaID=7043285069
[2026-03-09 14:34:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 16:16:50]  *** The last 200 lines of the pilot log: ***
[2026-03-09 16:16:50] 2026-03-09 15:16:12,281 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 16:16:50] 2026-03-09 15:16:12,281 | INFO     | log transfer has been attempted: DONE
[2026-03-09 16:16:50] 2026-03-09 15:16:12,281 | INFO     | job 7043285069 has finished - writing final server update
[2026-03-09 16:16:50] 2026-03-09 15:16:12,281 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_13075/.job.ad'
[2026-03-09 16:16:50] 2026-03-09 15:16:12,281 | INFO     | total number of processed events: 400 (read)
[2026-03-09 16:16:50] 2026-03-09 15:16:12,300 | INFO     | using path: /var/lib/boinc/var/slot76/slots/0/PanDA_Pilot-7043285069/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 16:16:50] 2026-03-09 15:16:12,300 | INFO     | extracted standard info from prmon json
[2026-03-09 16:16:50] 2026-03-09 15:16:12,300 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 16:16:50] 2026-03-09 15:16:12,300 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 16:16:50] 2026-03-09 15:16:12,300 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 16:16:50] 2026-03-09 15:16:12,300 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 16:16:50] 2026-03-09 15:16:12,302 | INFO     | fitting pss+swap vs Time
[2026-03-09 16:16:50] 2026-03-09 15:16:12,302 | INFO     | sum of square deviations: 310052325.0
[2026-03-09 16:16:50] 2026-03-09 15:16:12,302 | INFO     | sum of deviations: 10457116418.0
[2026-03-09 16:16:50] 2026-03-09 15:16:12,302 | INFO     | mean x: 1773066314.5
[2026-03-09 16:16:50] 2026-03-09 15:16:12,302 | INFO     | mean y: 2301614.06
[2026-03-09 16:16:50] 2026-03-09 15:16:12,303 | INFO     | intersect: -59797801054.29027
[2026-03-09 16:16:50] 2026-03-09 15:16:12,303 | INFO     | chi2: 1.1127057724220826
[2026-03-09 16:16:50] 2026-03-09 15:16:12,303 | INFO     | sum of square deviations: 265828240.0
[2026-03-09 16:16:50] 2026-03-09 15:16:12,303 | INFO     | sum of deviations: 9793961566.999998
[2026-03-09 16:16:50] 2026-03-09 15:16:12,303 | INFO     | mean x: 1773066162.0
[2026-03-09 16:16:50] 2026-03-09 15:16:12,303 | INFO     | mean y: 2299324.7578947367
[2026-03-09 16:16:50] 2026-03-09 15:16:12,303 | INFO     | intersect: -65323122257.14849
[2026-03-09 16:16:50] 2026-03-09 15:16:12,303 | INFO     | chi2: 1.1148028914194783
[2026-03-09 16:16:50] 2026-03-09 15:16:12,303 | INFO     | current chi2=1.1148028914194783 (change=-0.18847021821688104 %)
[2026-03-09 16:16:50] 2026-03-09 15:16:12,303 | INFO     | right removable region: 94
[2026-03-09 16:16:50] 2026-03-09 15:16:12,303 | INFO     | sum of square deviations: 265828240.0
[2026-03-09 16:16:50] 2026-03-09 15:16:12,304 | INFO     | sum of deviations: 743105599.0
[2026-03-09 16:16:50] 2026-03-09 15:16:12,304 | INFO     | mean x: 1773066467.0
[2026-03-09 16:16:50] 2026-03-09 15:16:12,304 | INFO     | mean y: 2334063.052631579
[2026-03-09 16:16:50] 2026-03-09 15:16:12,304 | INFO     | intersect: -4954158215.671589
[2026-03-09 16:16:50] 2026-03-09 15:16:12,304 | INFO     | chi2: 0.0008407703089950915
[2026-03-09 16:16:50] 2026-03-09 15:16:12,304 | INFO     | current chi2=0.0008407703089950915 (change=99.9244391168058 %)
[2026-03-09 16:16:50] 2026-03-09 15:16:12,304 | INFO     | sum of square deviations: 226022842.5
[2026-03-09 16:16:50] 2026-03-09 15:16:12,304 | INFO     | sum of deviations: 483218514.99999994
[2026-03-09 16:16:50] 2026-03-09 15:16:12,304 | INFO     | mean x: 1773066619.5
[2026-03-09 16:16:50] 2026-03-09 15:16:12,304 | INFO     | mean y: 2335050.488888889
[2026-03-09 16:16:50] 2026-03-09 15:16:12,304 | INFO     | intersect: -3788337650.527425
[2026-03-09 16:16:50] 2026-03-09 15:16:12,305 | INFO     | chi2: 0.0006943612456138553
[2026-03-09 16:16:50] 2026-03-09 15:16:12,305 | INFO     | current chi2=0.0006943612456138553 (change=17.41368145554851 %)
[2026-03-09 16:16:50] 2026-03-09 15:16:12,305 | INFO     | left removable region: 20
[2026-03-09 16:16:50] 2026-03-09 15:16:12,305 | INFO     | sum of square deviations: 125630262.5
[2026-03-09 16:16:50] 2026-03-09 15:16:12,305 | INFO     | sum of deviations: 364850607.5
[2026-03-09 16:16:50] 2026-03-09 15:16:12,305 | INFO     | mean x: 1773066741.5
[2026-03-09 16:16:50] 2026-03-09 15:16:12,305 | INFO     | mean y: 2334036.2297297297
[2026-03-09 16:16:50] 2026-03-09 15:16:12,305 | INFO     | intersect: -5146938638.213026
[2026-03-09 16:16:50] 2026-03-09 15:16:12,305 | INFO     | chi2: 0.00047577630121105525
[2026-03-09 16:16:50] 2026-03-09 15:16:12,305 | INFO     | current memory leak: 2.90 B/s (using 74 data points, chi2=0.00)
[2026-03-09 16:16:50] 2026-03-09 15:16:12,305 | INFO     | could have reported an average CPU frequency of 3575 MHz (7 samples)
[2026-03-09 16:16:50] 2026-03-09 15:16:12,305 | INFO     | ..............................
[2026-03-09 16:16:50] 2026-03-09 15:16:12,306 | INFO     | . Timing measurements:
[2026-03-09 16:16:50] 2026-03-09 15:16:12,306 | INFO     | . get job = 0 s
[2026-03-09 16:16:50] 2026-03-09 15:16:12,306 | INFO     | . initial setup = 5 s
[2026-03-09 16:16:50] 2026-03-09 15:16:12,306 | INFO     | . payload setup = 5 s
[2026-03-09 16:16:50] 2026-03-09 15:16:12,306 | INFO     | . stage-in = 0 s
[2026-03-09 16:16:50] 2026-03-09 15:16:12,306 | INFO     | . payload execution = 6076 s
[2026-03-09 16:16:50] 2026-03-09 15:16:12,306 | INFO     | . stage-out = 0 s
[2026-03-09 16:16:50] 2026-03-09 15:16:12,306 | INFO     | . log creation = 0 s
[2026-03-09 16:16:50] 2026-03-09 15:16:12,306 | INFO     | ..............................
[2026-03-09 16:16:50] 2026-03-09 15:16:12,354 | INFO     | 
[2026-03-09 16:16:50] 2026-03-09 15:16:12,354 | INFO     | job summary report
[2026-03-09 16:16:50] 2026-03-09 15:16:12,354 | INFO     | --------------------------------------------------
[2026-03-09 16:16:50] 2026-03-09 15:16:12,354 | INFO     | PanDA job id: 7043285069
[2026-03-09 16:16:50] 2026-03-09 15:16:12,354 | INFO     | task id: 48966988
[2026-03-09 16:16:50] 2026-03-09 15:16:12,354 | INFO     | errors: (none)
[2026-03-09 16:16:50] 2026-03-09 15:16:12,354 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 16:16:50] 2026-03-09 15:16:12,354 | INFO     | pilot state: finished 
[2026-03-09 16:16:50] 2026-03-09 15:16:12,354 | INFO     | transexitcode: 0
[2026-03-09 16:16:50] 2026-03-09 15:16:12,354 | INFO     | exeerrorcode: 0
[2026-03-09 16:16:50] 2026-03-09 15:16:12,354 | INFO     | exeerrordiag: 
[2026-03-09 16:16:50] 2026-03-09 15:16:12,354 | INFO     | exitcode: 0
[2026-03-09 16:16:50] 2026-03-09 15:16:12,354 | INFO     | exitmsg: OK
[2026-03-09 16:16:50] 2026-03-09 15:16:12,354 | INFO     | cpuconsumptiontime: 22914 s
[2026-03-09 16:16:50] 2026-03-09 15:16:12,355 | INFO     | nevents: 400
[2026-03-09 16:16:50] 2026-03-09 15:16:12,355 | INFO     | neventsw: 0
[2026-03-09 16:16:50] 2026-03-09 15:16:12,355 | INFO     | pid: 763441
[2026-03-09 16:16:50] 2026-03-09 15:16:12,355 | INFO     | pgrp: 763441
[2026-03-09 16:16:50] 2026-03-09 15:16:12,355 | INFO     | corecount: 4
[2026-03-09 16:16:50] 2026-03-09 15:16:12,355 | INFO     | event service: False
[2026-03-09 16:16:50] 2026-03-09 15:16:12,355 | INFO     | sizes: {0: 2279175, 1: 2280304, 11: 2280304, 6086: 2307441, 6087: 2316461, 6088: 2316839}
[2026-03-09 16:16:50] 2026-03-09 15:16:12,355 | INFO     | --------------------------------------------------
[2026-03-09 16:16:50] 2026-03-09 15:16:12,355 | INFO     | 
[2026-03-09 16:16:50] 2026-03-09 15:16:12,355 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot76/slots/0
[2026-03-09 16:16:50] 2026-03-09 15:16:12,377 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 16:16:50] 2026-03-09 15:16:12,378 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 16:16:50] 2026-03-09 15:16:12,378 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 16:16:50] 2026-03-09 15:16:12,378 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 16:16:50] 2026-03-09 15:16:12,378 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 16:16:50] 2026-03-09 15:16:12,378 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 16:16:50] 2026-03-09 15:16:12,378 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 16:16:50] 2026-03-09 15:16:12,378 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 16:16:50] 2026-03-09 15:16:12,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 16:16:50] 2026-03-09 15:16:12,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 16:16:50] 2026-03-09 15:16:12,378 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 16:16:50] 2026-03-09 15:16:12,378 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 16:16:50] 2026-03-09 15:16:12,378 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 16:16:50] 2026-03-09 15:16:12,378 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 16:16:50] 2026-03-09 15:16:12,378 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 16:16:50] 2026-03-09 15:16:12,378 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 16:16:50] 2026-03-09 15:16:12,378 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 16:16:50] 2026-03-09 15:16:12,378 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 16:16:50] 2026-03-09 15:16:12,378 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 16:16:50] 2026-03-09 15:16:12,378 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 16:16:50] 2026-03-09 15:16:12,379 | INFO     | job 7043285069 has completed (purged errors)
[2026-03-09 16:16:50] 2026-03-09 15:16:12,379 | INFO     | overall cleanup function is called
[2026-03-09 16:16:50] 2026-03-09 15:16:13,386 | INFO     | --- collectZombieJob: --- 10, [763441]
[2026-03-09 16:16:50] 2026-03-09 15:16:13,386 | INFO     | zombie collector waiting for pid 763441
[2026-03-09 16:16:50] 2026-03-09 15:16:13,386 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 16:16:50] 2026-03-09 15:16:13,387 | INFO     | collected zombie processes
[2026-03-09 16:16:50] 2026-03-09 15:16:13,387 | INFO     | will attempt to kill all subprocesses of pid=763441
[2026-03-09 16:16:50] 2026-03-09 15:16:13,904 | INFO     | process IDs to be killed: [763441] (in reverse order)
[2026-03-09 16:16:50] 2026-03-09 15:16:14,161 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 16:16:50] 2026-03-09 15:16:14,162 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 16:16:50] 2026-03-09 15:16:14,195 | INFO     | did not find any defunct processes belonging to 763441
[2026-03-09 16:16:50] 2026-03-09 15:16:14,227 | INFO     | did not find any defunct processes belonging to 763441
[2026-03-09 16:16:50] 2026-03-09 15:16:14,228 | INFO     | ready for new job
[2026-03-09 16:16:50] 2026-03-09 15:16:14,228 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 16:16:50] 2026-03-09 15:16:14,229 | INFO     | **************************************
[2026-03-09 16:16:50] 2026-03-09 15:16:14,229 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 16:16:50] 2026-03-09 15:16:14,229 | INFO     | **************************************
[2026-03-09 16:16:50] 2026-03-09 15:16:14,229 | INFO     | 
[2026-03-09 16:16:50] 2026-03-09 15:16:14,235 | INFO     | architecture information:
[2026-03-09 16:16:50] 2026-03-09 15:16:14,235 | INFO     | executing command: cat /etc/os-release
[2026-03-09 16:16:50] 2026-03-09 15:16:14,250 | INFO     | cat /etc/os-release:
[2026-03-09 16:16:50] NAME="CentOS Linux"
[2026-03-09 16:16:50] VERSION="7 (Core)"
[2026-03-09 16:16:50] ID="centos"
[2026-03-09 16:16:50] ID_LIKE="rhel fedora"
[2026-03-09 16:16:50] VERSION_ID="7"
[2026-03-09 16:16:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 16:16:50] ANSI_COLOR="0;31"
[2026-03-09 16:16:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 16:16:50] HOME_URL="https://www.centos.org/"
[2026-03-09 16:16:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 16:16:50] 
[2026-03-09 16:16:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 16:16:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 16:16:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 16:16:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 16:16:50] 
[2026-03-09 16:16:50] 2026-03-09 15:16:14,250 | INFO     | **************************************
[2026-03-09 16:16:50] 2026-03-09 15:16:14,755 | INFO     | executing command: df -mP /var/lib/boinc/var/slot76/slots/0
[2026-03-09 16:16:50] 2026-03-09 15:16:14,783 | INFO     | sufficient remaining disk space (20586692608 B)
[2026-03-09 16:16:50] 2026-03-09 15:16:14,783 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 16:16:50] 2026-03-09 15:16:14,784 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 16:16:50] 2026-03-09 15:16:14,784 | INFO     | update_server=False
[2026-03-09 16:16:50] 2026-03-09 15:16:14,784 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 16:16:50] 2026-03-09 15:16:14,784 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 16:16:50] 2026-03-09 15:16:15,066 | INFO     | all payload control threads have been joined
[2026-03-09 16:16:50] 2026-03-09 15:16:15,085 | INFO     | all data control threads have been joined
[2026-03-09 16:16:50] 2026-03-09 15:16:15,568 | WARNING  | process 763441 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 16:16:50] 2026-03-09 15:16:15,788 | INFO     | [job] retrieve thread has finished
[2026-03-09 16:16:50] 2026-03-09 15:16:15,917 | INFO     | using path: /var/lib/boinc/var/slot76/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 16:16:50] 2026-03-09 15:16:15,998 | INFO     | [payload] validate_post thread has finished
[2026-03-09 16:16:50] 2026-03-09 15:16:16,071 | INFO     | [payload] control thread has finished
[2026-03-09 16:16:50] 2026-03-09 15:16:16,090 | INFO     | [data] control thread has finished
[2026-03-09 16:16:50] 2026-03-09 15:16:16,325 | INFO     | [data] copytool_in thread has finished
[2026-03-09 16:16:50] 2026-03-09 15:16:16,396 | INFO     | number of running child processes to parent process 763441: 1
[2026-03-09 16:16:50] 2026-03-09 15:16:16,397 | INFO     | maximum number of monitored processes: 6
[2026-03-09 16:16:50] 2026-03-09 15:16:16,397 | INFO     | aborting job monitoring since job object (job id=7043285069) has expired
[2026-03-09 16:16:50] 2026-03-09 15:16:16,397 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 16:16:50] 2026-03-09 15:16:16,397 | INFO     | will abort loop
[2026-03-09 16:16:50] 2026-03-09 15:16:16,486 | INFO     | all job control threads have been joined
[2026-03-09 16:16:50] 2026-03-09 15:16:16,524 | INFO     | [job] validate thread has finished
[2026-03-09 16:16:50] 2026-03-09 15:16:16,640 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 16:16:50] 2026-03-09 15:16:16,789 | INFO     | [data] copytool_out thread has finished
[2026-03-09 16:16:50] 2026-03-09 15:16:16,966 | INFO     | [payload] failed_post thread has finished
[2026-03-09 16:16:50] 2026-03-09 15:16:17,143 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 16:16:50] 2026-03-09 15:16:17,156 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 16:16:50] 2026-03-09 15:16:17,363 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 16:16:50] 2026-03-09 15:16:17,401 | INFO     | [job] job monitor thread has finished
[2026-03-09 16:16:50] 2026-03-09 15:16:17,491 | INFO     | [job] control thread has finished
[2026-03-09 16:16:50] 2026-03-09 15:16:18,282 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 16:16:50] 2026-03-09 15:16:18,368 | INFO     | [job] queue monitor thread has finished
[2026-03-09 16:16:50] 2026-03-09 15:16:22,288 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 16:16:50] 2026-03-09 15:16:25,123 | INFO     | job.realtimelogging is not enabled
[2026-03-09 16:16:50] 2026-03-09 15:16:26,128 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 16:16:50] 2026-03-09 15:16:43,446 | INFO     | [monitor] cgroup control has ended
[2026-03-09 16:16:50] 2026-03-09 15:16:44,944 | INFO     | PID=752732 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-09 16:16:50] 2026-03-09 15:16:44,945 | INFO     | .. there are 58 such processes running
[2026-03-09 16:16:50] 2026-03-09 15:16:44,945 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 16:16:50] 2026-03-09 15:16:44,945 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 16:16:50] 2026-03-09 15:16:44,945 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 16:16:50] 2026-03-09 15:16:45,420 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22604326389568)>', '<ExcThread(monitor, started 22604084942592)>']
[2026-03-09 16:16:50] 2026-03-09 15:16:45,951 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 16:16:50] 2026-03-09 15:16:45,951 | INFO     | [monitor] control thread has ended
[2026-03-09 16:16:50] 2026-03-09 15:16:50,445 | INFO     | all workflow threads have been joined
[2026-03-09 16:16:50] 2026-03-09 15:16:50,445 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 16:16:50] 2026-03-09 15:16:50,446 | INFO     | traces error code: 0
[2026-03-09 16:16:50] 2026-03-09 15:16:50,446 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 16:16:50] 2026-03-09 15:16:50,580 [wrapper] ==== pilot stdout END ====
[2026-03-09 16:16:50] 2026-03-09 15:16:50,582 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 16:16:50] 2026-03-09 15:16:50,585 [wrapper] pilotpid: 752732
[2026-03-09 16:16:50] 2026-03-09 15:16:50,587 [wrapper] Pilot exit status: 0
[2026-03-09 16:16:50] 2026-03-09 15:16:50,594 [wrapper] pandaids: 7043285069
[2026-03-09 16:16:50] 2026-03-09 15:16:50,726 [wrapper] cleanup supervisor_pilot 1684802 752733
[2026-03-09 16:16:50] 2026-03-09 15:16:50,729 [wrapper] Test setup, not cleaning
[2026-03-09 16:16:50] 2026-03-09 15:16:50,732 [wrapper] apfmon messages muted
[2026-03-09 16:16:50] 2026-03-09 15:16:50,735 [wrapper] ==== wrapper stdout END ====
[2026-03-09 16:16:50] 2026-03-09 15:16:50,738 [wrapper] ==== wrapper stderr END ====
[2026-03-09 16:16:50]  *** Error codes and diagnostics ***
[2026-03-09 16:16:50]     "exeErrorCode": 0,
[2026-03-09 16:16:50]     "exeErrorDiag": "",
[2026-03-09 16:16:50]     "pilotErrorCode": 0,
[2026-03-09 16:16:50]     "pilotErrorDiag": "",
[2026-03-09 16:16:50]  *** Listing of results directory ***
[2026-03-09 16:16:50] total 402053
[2026-03-09 16:16:50] -rw-r--r--. 1 boinc boinc      5111 Mar  6 15:31 queuedata.json
[2026-03-09 16:16:50] -rw-r--r--. 1 boinc boinc    584627 Mar  6 15:31 pilot3.tar.gz
[2026-03-09 16:16:50] -rwx------. 1 boinc boinc     36322 Mar  6 15:31 runpilot2-wrapper.sh
[2026-03-09 16:16:50] -rw-r--r--. 1 boinc boinc       100 Mar  9 14:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 16:16:50] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 14:34 run_atlas
[2026-03-09 16:16:50] -rw-r--r--. 1 boinc boinc       105 Mar  9 14:34 job.xml
[2026-03-09 16:16:50] -rw-r--r--. 2 boinc boinc 214486237 Mar  9 14:34 EVNT.48966985._000067.pool.root.1
[2026-03-09 16:16:50] drwxrwx--x. 2 boinc boinc         5 Mar  9 14:34 shared
[2026-03-09 16:16:50] -rw-r--r--. 2 boinc boinc    597968 Mar  9 14:34 input.tar.gz
[2026-03-09 16:16:50] -rw-r--r--. 1 boinc boinc      6705 Mar  9 14:34 init_data.xml
[2026-03-09 16:16:50] -rw-r--r--. 2 boinc boinc     15845 Mar  9 14:34 start_atlas.sh
[2026-03-09 16:16:50] -rw-r--r--. 1 boinc boinc         0 Mar  9 14:34 boinc_lockfile
[2026-03-09 16:16:50] -rw-r--r--. 1 boinc boinc      2589 Mar  9 14:34 pandaJob.out
[2026-03-09 16:16:50] -rw-------. 1 boinc boinc    990728 Mar  9 14:34 agis_schedconf.cvmfs.json
[2026-03-09 16:16:50] -rw-------. 1 boinc boinc   1511578 Mar  9 14:34 agis_ddmendpoints.agis.ALL.json
[2026-03-09 16:16:50] -rw-------. 1 boinc boinc       443 Mar  9 14:34 workernode_map.json
[2026-03-09 16:16:50] drwx------. 5 boinc boinc        22 Mar  9 14:34 pilot3
[2026-03-09 16:16:50] -rw-r--r--. 1 boinc boinc       529 Mar  9 16:15 boinc_task_state.xml
[2026-03-09 16:16:50] -rw-------. 1 boinc boinc 194749725 Mar  9 16:15 HITS.48966988._008949.pool.root.1
[2026-03-09 16:16:50] -rw-------. 1 boinc boinc        95 Mar  9 16:15 pilot_heartbeat.json
[2026-03-09 16:16:50] -rw-------. 1 boinc boinc      1044 Mar  9 16:16 memory_monitor_summary.json
[2026-03-09 16:16:50] -rw-------. 1 boinc boinc    289703 Mar  9 16:16 log.48966988._008949.job.log.tgz.1
[2026-03-09 16:16:50] -rw-------. 1 boinc boinc      6377 Mar  9 16:16 heartbeat.json
[2026-03-09 16:16:50] -rw-r--r--. 1 boinc boinc      8192 Mar  9 16:16 boinc_mmap_file
[2026-03-09 16:16:50] -rw-r--r--. 1 boinc boinc        27 Mar  9 16:16 wrapper_checkpoint.txt
[2026-03-09 16:16:50] -rw-------. 1 boinc boinc      5430 Mar  9 16:16 pilotlog.txt
[2026-03-09 16:16:50] -rw-------. 1 boinc boinc    873313 Mar  9 16:16 log.48966988._008949.job.log.1
[2026-03-09 16:16:50] -rw-------. 1 boinc boinc       357 Mar  9 16:16 output.list
[2026-03-09 16:16:50] -rw-r--r--. 1 boinc boinc       620 Mar  9 16:16 runtime_log
[2026-03-09 16:16:50] -rw-------. 1 boinc boinc   1177600 Mar  9 16:16 result.tar.gz
[2026-03-09 16:16:50] -rw-------. 1 boinc boinc       669 Mar  9 16:16 fAaKDmjOlI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmiAQLDmjby8In.diag
[2026-03-09 16:16:50] -rw-r--r--. 1 boinc boinc      9204 Mar  9 16:16 runtime_log.err
[2026-03-09 16:16:50] -rw-r--r--. 1 boinc boinc     21070 Mar  9 16:16 stderr.txt
[2026-03-09 16:16:50] HITS file was successfully produced:
[2026-03-09 16:16:50] -rw-------. 1 boinc boinc 194749725 Mar  9 16:15 shared/HITS.pool.root.1
[2026-03-09 16:16:50]  *** Contents of shared directory: ***
[2026-03-09 16:16:50] total 400539
[2026-03-09 16:16:50] -rw-r--r--. 2 boinc boinc 214486237 Mar  9 14:34 ATLAS.root_0
[2026-03-09 16:16:50] -rw-r--r--. 2 boinc boinc    597968 Mar  9 14:34 input.tar.gz
[2026-03-09 16:16:50] -rw-r--r--. 2 boinc boinc     15845 Mar  9 14:34 start_atlas.sh
[2026-03-09 16:16:50] -rw-------. 1 boinc boinc 194749725 Mar  9 16:15 HITS.pool.root.1
[2026-03-09 16:16:50] -rw-------. 1 boinc boinc   1177600 Mar  9 16:16 result.tar.gz
16:16:51 (748162): run_atlas exited; CPU time 23231.758860
16:16:51 (748162): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN