Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:20:03 (1108267): wrapper (7.7.26015): starting
23:20:03 (1108267): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 23:20:03] Arguments: --nthreads 4
[2026-03-08 23:20:03] Threads: 4
[2026-03-08 23:20:03] Checking for CVMFS
[2026-03-08 23:20:03] No cvmfs_config command found, will try listing directly
[2026-03-08 23:20:03] CVMFS is ok
[2026-03-08 23:20:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 23:20:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 23:20:03] Further information can be found at the LHC@home message board.
[2026-03-08 23:20:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 23:20:03] Checking for apptainer binary...
[2026-03-08 23:20:03] which: no apptainer in ((null))
[2026-03-08 23:20:03] apptainer is not installed, using version from CVMFS
[2026-03-08 23:20:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 23:20:03] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot72/slots/6/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-08 23:20:03] apptainer works
[2026-03-08 23:20:03] Set ATHENA_PROC_NUMBER=4
[2026-03-08 23:20:03] Set ATHENA_CORE_NUMBER=4
[2026-03-08 23:20:03] Starting ATLAS job with PandaID=7043213481
[2026-03-08 23:20:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot72/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 02:22:41]  *** The last 200 lines of the pilot log: ***
[2026-03-09 02:22:41] 2026-03-09 01:21:41,605 | INFO     | time since job start (10884s) is within the limit (349056.0s)
[2026-03-09 02:22:41] 2026-03-09 01:21:41,884 | INFO     | job 7043213481 has state=finished
[2026-03-09 02:22:41] 2026-03-09 01:21:41,885 | INFO     | preparing for final server update for job 7043213481 in state='finished'
[2026-03-09 02:22:41] 2026-03-09 01:21:41,885 | INFO     | reading metadata from: /var/lib/boinc/var/slot72/slots/6/PanDA_Pilot-7043213481/jobReport.json
[2026-03-09 02:22:41] 2026-03-09 01:21:41,886 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot72/slots/6/workernode_map.json
[2026-03-09 02:22:41] 2026-03-09 01:21:41,887 | INFO     | this job has now completed (state=finished)
[2026-03-09 02:22:41] 2026-03-09 01:21:41,887 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 02:22:41] 2026-03-09 01:21:41,887 | INFO     | log transfer has been attempted: DONE
[2026-03-09 02:22:41] 2026-03-09 01:21:41,887 | INFO     | job 7043213481 has finished - writing final server update
[2026-03-09 02:22:41] 2026-03-09 01:21:41,887 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3825321/.job.ad'
[2026-03-09 02:22:41] 2026-03-09 01:21:41,887 | INFO     | total number of processed events: 400 (read)
[2026-03-09 02:22:41] 2026-03-09 01:21:41,906 | INFO     | using path: /var/lib/boinc/var/slot72/slots/6/PanDA_Pilot-7043213481/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 02:22:41] 2026-03-09 01:21:41,906 | INFO     | extracted standard info from prmon json
[2026-03-09 02:22:41] 2026-03-09 01:21:41,906 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 02:22:41] 2026-03-09 01:21:41,906 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 02:22:41] 2026-03-09 01:21:41,906 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 02:22:41] 2026-03-09 01:21:41,906 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 02:22:41] 2026-03-09 01:21:41,908 | INFO     | fitting pss+swap vs Time
[2026-03-09 02:22:41] 2026-03-09 01:21:41,909 | INFO     | sum of square deviations: 1748737904.5
[2026-03-09 02:22:41] 2026-03-09 01:21:41,909 | INFO     | sum of deviations: 14801406854.0
[2026-03-09 02:22:41] 2026-03-09 01:21:41,909 | INFO     | mean x: 1773013836.5
[2026-03-09 02:22:41] 2026-03-09 01:21:41,909 | INFO     | mean y: 2327461.7303370787
[2026-03-09 02:22:41] 2026-03-09 01:21:41,909 | INFO     | intersect: -15004552119.410425
[2026-03-09 02:22:41] 2026-03-09 01:21:41,910 | INFO     | chi2: 1.064677050845604
[2026-03-09 02:22:41] 2026-03-09 01:21:41,910 | INFO     | sum of square deviations: 1605470102.0
[2026-03-09 02:22:41] 2026-03-09 01:21:41,910 | INFO     | sum of deviations: 14275272765.0
[2026-03-09 02:22:41] 2026-03-09 01:21:41,910 | INFO     | mean x: 1773013684.0
[2026-03-09 02:22:41] 2026-03-09 01:21:41,910 | INFO     | mean y: 2326901.612716763
[2026-03-09 02:22:41] 2026-03-09 01:21:41,910 | INFO     | intersect: -15762684183.705841
[2026-03-09 02:22:41] 2026-03-09 01:21:41,911 | INFO     | chi2: 1.0653755396090103
[2026-03-09 02:22:41] 2026-03-09 01:21:41,911 | INFO     | current chi2=1.0653755396090103 (change=-0.06560569356233567 %)
[2026-03-09 02:22:41] 2026-03-09 01:21:41,911 | INFO     | right removable region: 172
[2026-03-09 02:22:41] 2026-03-09 01:21:41,911 | INFO     | sum of square deviations: 1605470102.0
[2026-03-09 02:22:41] 2026-03-09 01:21:41,911 | INFO     | sum of deviations: -827924635.0
[2026-03-09 02:22:41] 2026-03-09 01:21:41,911 | INFO     | mean x: 1773013989.0
[2026-03-09 02:22:41] 2026-03-09 01:21:41,911 | INFO     | mean y: 2343768.5028901733
[2026-03-09 02:22:41] 2026-03-09 01:21:41,911 | INFO     | intersect: 916669085.3456446
[2026-03-09 02:22:41] 2026-03-09 01:21:41,912 | INFO     | chi2: 0.0034526918854118943
[2026-03-09 02:22:41] 2026-03-09 01:21:41,912 | INFO     | current chi2=0.0034526918854118943 (change=99.67570524013178 %)
[2026-03-09 02:22:41] 2026-03-09 01:21:41,912 | INFO     | sum of square deviations: 1470248962.0
[2026-03-09 02:22:41] 2026-03-09 01:21:41,912 | INFO     | sum of deviations: -102508426.00000003
[2026-03-09 02:22:41] 2026-03-09 01:21:41,912 | INFO     | mean x: 1773014141.5
[2026-03-09 02:22:41] 2026-03-09 01:21:41,912 | INFO     | mean y: 2342950.1666666665
[2026-03-09 02:22:41] 2026-03-09 01:21:41,912 | INFO     | intersect: 125960713.97292082
[2026-03-09 02:22:41] 2026-03-09 01:21:41,912 | INFO     | chi2: 0.0027921860243814195
[2026-03-09 02:22:41] 2026-03-09 01:21:41,912 | INFO     | current chi2=0.0027921860243814195 (change=19.130170978221496 %)
[2026-03-09 02:22:41] 2026-03-09 01:21:41,912 | INFO     | left removable region: 20
[2026-03-09 02:22:41] 2026-03-09 01:21:41,913 | INFO     | sum of square deviations: 1088905998.0
[2026-03-09 02:22:41] 2026-03-09 01:21:41,913 | INFO     | sum of deviations: 722713756.5000001
[2026-03-09 02:22:41] 2026-03-09 01:21:41,913 | INFO     | mean x: 1773014263.5
[2026-03-09 02:22:41] 2026-03-09 01:21:41,913 | INFO     | mean y: 2341556.7565789474
[2026-03-09 02:22:41] 2026-03-09 01:21:41,913 | INFO     | intersect: -1174419156.3404996
[2026-03-09 02:22:41] 2026-03-09 01:21:41,913 | INFO     | chi2: 0.001943954321767104
[2026-03-09 02:22:41] 2026-03-09 01:21:41,913 | INFO     | current memory leak: 0.66 B/s (using 152 data points, chi2=0.00)
[2026-03-09 02:22:41] 2026-03-09 01:21:41,914 | INFO     | could have reported an average CPU frequency of 3600 MHz (10 samples)
[2026-03-09 02:22:41] 2026-03-09 01:21:41,914 | INFO     | ..............................
[2026-03-09 02:22:41] 2026-03-09 01:21:41,914 | INFO     | . Timing measurements:
[2026-03-09 02:22:41] 2026-03-09 01:21:41,914 | INFO     | . get job = 0 s
[2026-03-09 02:22:41] 2026-03-09 01:21:41,914 | INFO     | . initial setup = 5 s
[2026-03-09 02:22:41] 2026-03-09 01:21:41,914 | INFO     | . payload setup = 5 s
[2026-03-09 02:22:41] 2026-03-09 01:21:41,914 | INFO     | . stage-in = 0 s
[2026-03-09 02:22:41] 2026-03-09 01:21:41,917 | INFO     | . payload execution = 10859 s
[2026-03-09 02:22:41] 2026-03-09 01:21:41,917 | INFO     | . stage-out = 0 s
[2026-03-09 02:22:41] 2026-03-09 01:21:41,917 | INFO     | . log creation = 0 s
[2026-03-09 02:22:41] 2026-03-09 01:21:41,917 | INFO     | ..............................
[2026-03-09 02:22:41] 2026-03-09 01:21:41,963 | INFO     | 
[2026-03-09 02:22:41] 2026-03-09 01:21:41,963 | INFO     | job summary report
[2026-03-09 02:22:41] 2026-03-09 01:21:41,963 | INFO     | --------------------------------------------------
[2026-03-09 02:22:41] 2026-03-09 01:21:41,964 | INFO     | PanDA job id: 7043213481
[2026-03-09 02:22:41] 2026-03-09 01:21:41,964 | INFO     | task id: 48966932
[2026-03-09 02:22:41] 2026-03-09 01:21:41,964 | INFO     | errors: (none)
[2026-03-09 02:22:41] 2026-03-09 01:21:41,964 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 02:22:41] 2026-03-09 01:21:41,964 | INFO     | pilot state: finished 
[2026-03-09 02:22:41] 2026-03-09 01:21:41,964 | INFO     | transexitcode: 0
[2026-03-09 02:22:41] 2026-03-09 01:21:41,964 | INFO     | exeerrorcode: 0
[2026-03-09 02:22:41] 2026-03-09 01:21:41,964 | INFO     | exeerrordiag: 
[2026-03-09 02:22:41] 2026-03-09 01:21:41,964 | INFO     | exitcode: 0
[2026-03-09 02:22:41] 2026-03-09 01:21:41,964 | INFO     | exitmsg: OK
[2026-03-09 02:22:41] 2026-03-09 01:21:41,964 | INFO     | cpuconsumptiontime: 41852 s
[2026-03-09 02:22:41] 2026-03-09 01:21:41,964 | INFO     | nevents: 400
[2026-03-09 02:22:41] 2026-03-09 01:21:41,964 | INFO     | neventsw: 0
[2026-03-09 02:22:41] 2026-03-09 01:21:41,964 | INFO     | pid: 1118731
[2026-03-09 02:22:41] 2026-03-09 01:21:41,964 | INFO     | pgrp: 1118731
[2026-03-09 02:22:41] 2026-03-09 01:21:41,964 | INFO     | corecount: 4
[2026-03-09 02:22:41] 2026-03-09 01:21:41,964 | INFO     | event service: False
[2026-03-09 02:22:41] 2026-03-09 01:21:41,964 | INFO     | sizes: {0: 2280191, 11: 2280191, 10868: 2309420, 10870: 2318440, 10873: 2318496, 10874: 2318690}
[2026-03-09 02:22:41] 2026-03-09 01:21:41,964 | INFO     | --------------------------------------------------
[2026-03-09 02:22:41] 2026-03-09 01:21:41,964 | INFO     | 
[2026-03-09 02:22:41] 2026-03-09 01:21:41,964 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot72/slots/6
[2026-03-09 02:22:41] 2026-03-09 01:21:41,987 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 02:22:41] 2026-03-09 01:21:41,987 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 02:22:41] 2026-03-09 01:21:41,987 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 02:22:41] 2026-03-09 01:21:41,987 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 02:22:41] 2026-03-09 01:21:41,987 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 02:22:41] 2026-03-09 01:21:41,987 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 02:22:41] 2026-03-09 01:21:41,988 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 02:22:41] 2026-03-09 01:21:41,988 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 02:22:41] 2026-03-09 01:21:41,988 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 02:22:41] 2026-03-09 01:21:41,988 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 02:22:41] 2026-03-09 01:21:41,988 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 02:22:41] 2026-03-09 01:21:41,988 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 02:22:41] 2026-03-09 01:21:41,988 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 02:22:41] 2026-03-09 01:21:41,988 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 02:22:41] 2026-03-09 01:21:41,988 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 02:22:41] 2026-03-09 01:21:41,988 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 02:22:41] 2026-03-09 01:21:41,988 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 02:22:41] 2026-03-09 01:21:41,988 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 02:22:41] 2026-03-09 01:21:41,988 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 02:22:41] 2026-03-09 01:21:41,988 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 02:22:41] 2026-03-09 01:21:41,988 | INFO     | job 7043213481 has completed (purged errors)
[2026-03-09 02:22:41] 2026-03-09 01:21:41,988 | INFO     | overall cleanup function is called
[2026-03-09 02:22:41] 2026-03-09 01:21:42,996 | INFO     | --- collectZombieJob: --- 10, [1118731]
[2026-03-09 02:22:41] 2026-03-09 01:21:42,996 | INFO     | zombie collector waiting for pid 1118731
[2026-03-09 02:22:41] 2026-03-09 01:21:42,996 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 02:22:41] 2026-03-09 01:21:42,996 | INFO     | collected zombie processes
[2026-03-09 02:22:41] 2026-03-09 01:21:42,996 | INFO     | will attempt to kill all subprocesses of pid=1118731
[2026-03-09 02:22:41] 2026-03-09 01:21:43,488 | INFO     | process IDs to be killed: [1118731] (in reverse order)
[2026-03-09 02:22:41] 2026-03-09 01:21:43,850 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 02:22:41] 2026-03-09 01:21:43,850 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 02:22:41] 2026-03-09 01:21:43,881 | INFO     | did not find any defunct processes belonging to 1118731
[2026-03-09 02:22:41] 2026-03-09 01:21:43,909 | INFO     | did not find any defunct processes belonging to 1118731
[2026-03-09 02:22:41] 2026-03-09 01:21:43,910 | INFO     | ready for new job
[2026-03-09 02:22:41] 2026-03-09 01:21:43,910 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 02:22:41] 2026-03-09 01:21:43,911 | INFO     | **************************************
[2026-03-09 02:22:41] 2026-03-09 01:21:43,911 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 02:22:41] 2026-03-09 01:21:43,911 | INFO     | **************************************
[2026-03-09 02:22:41] 2026-03-09 01:21:43,911 | INFO     | 
[2026-03-09 02:22:41] 2026-03-09 01:21:43,917 | INFO     | architecture information:
[2026-03-09 02:22:41] 2026-03-09 01:21:43,917 | INFO     | executing command: cat /etc/os-release
[2026-03-09 02:22:41] 2026-03-09 01:21:43,938 | INFO     | cat /etc/os-release:
[2026-03-09 02:22:41] NAME="CentOS Linux"
[2026-03-09 02:22:41] VERSION="7 (Core)"
[2026-03-09 02:22:41] ID="centos"
[2026-03-09 02:22:41] ID_LIKE="rhel fedora"
[2026-03-09 02:22:41] VERSION_ID="7"
[2026-03-09 02:22:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 02:22:41] ANSI_COLOR="0;31"
[2026-03-09 02:22:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 02:22:41] HOME_URL="https://www.centos.org/"
[2026-03-09 02:22:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 02:22:41] 
[2026-03-09 02:22:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 02:22:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 02:22:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 02:22:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 02:22:41] 
[2026-03-09 02:22:41] 2026-03-09 01:21:43,938 | INFO     | **************************************
[2026-03-09 02:22:41] 2026-03-09 01:21:44,441 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/6
[2026-03-09 02:22:41] 2026-03-09 01:21:44,458 | INFO     | sufficient remaining disk space (21411921920 B)
[2026-03-09 02:22:41] 2026-03-09 01:21:44,458 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 02:22:41] 2026-03-09 01:21:44,458 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 02:22:41] 2026-03-09 01:21:44,458 | INFO     | update_server=False
[2026-03-09 02:22:41] 2026-03-09 01:21:44,458 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 02:22:41] 2026-03-09 01:21:44,458 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 02:22:41] 2026-03-09 01:21:44,603 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 02:22:41] 2026-03-09 01:21:44,603 | INFO     | aborting loop
[2026-03-09 02:22:41] 2026-03-09 01:21:44,643 | INFO     | all job control threads have been joined
[2026-03-09 02:22:41] 2026-03-09 01:21:45,107 | INFO     | all payload control threads have been joined
[2026-03-09 02:22:41] 2026-03-09 01:21:45,170 | INFO     | all data control threads have been joined
[2026-03-09 02:22:41] 2026-03-09 01:21:45,463 | INFO     | [job] retrieve thread has finished
[2026-03-09 02:22:41] 2026-03-09 01:21:45,545 | INFO     | [payload] validate_post thread has finished
[2026-03-09 02:22:41] 2026-03-09 01:21:45,566 | INFO     | [data] copytool_in thread has finished
[2026-03-09 02:22:41] 2026-03-09 01:21:45,608 | INFO     | [job] job monitor thread has finished
[2026-03-09 02:22:41] 2026-03-09 01:21:45,648 | INFO     | [job] control thread has finished
[2026-03-09 02:22:41] 2026-03-09 01:21:45,892 | INFO     | [payload] failed_post thread has finished
[2026-03-09 02:22:41] 2026-03-09 01:21:46,112 | INFO     | [payload] control thread has finished
[2026-03-09 02:22:41] 2026-03-09 01:21:46,175 | INFO     | [data] control thread has finished
[2026-03-09 02:22:41] 2026-03-09 01:21:46,275 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 02:22:41] 2026-03-09 01:21:46,275 | INFO     | [job] validate thread has finished
[2026-03-09 02:22:41] 2026-03-09 01:21:46,321 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 02:22:41] 2026-03-09 01:21:46,464 | INFO     | [data] copytool_out thread has finished
[2026-03-09 02:22:41] 2026-03-09 01:21:46,601 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 02:22:41] 2026-03-09 01:21:46,826 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 02:22:41] 2026-03-09 01:21:46,975 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 02:22:41] 2026-03-09 01:21:47,573 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 02:22:41] 2026-03-09 01:21:47,979 | INFO     | [job] queue monitor thread has finished
[2026-03-09 02:22:41] 2026-03-09 01:21:51,579 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 02:22:41] 2026-03-09 01:22:15,298 | INFO     | PID=1112866 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 02:22:41] 2026-03-09 01:22:15,298 | INFO     | .. there are 50 such processes running
[2026-03-09 02:22:41] 2026-03-09 01:22:15,298 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 02:22:41] 2026-03-09 01:22:15,298 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 02:22:41] 2026-03-09 01:22:15,299 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 02:22:41] 2026-03-09 01:22:34,961 | INFO     | [monitor] cgroup control has ended
[2026-03-09 02:22:41] 2026-03-09 01:22:35,866 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22572642838336)>', '<ExcThread(monitor, started 22572405372672)>']
[2026-03-09 02:22:41] 2026-03-09 01:22:36,407 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 02:22:41] 2026-03-09 01:22:36,407 | INFO     | [monitor] control thread has ended
[2026-03-09 02:22:41] 2026-03-09 01:22:40,891 | INFO     | all workflow threads have been joined
[2026-03-09 02:22:41] 2026-03-09 01:22:40,891 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 02:22:41] 2026-03-09 01:22:40,891 | INFO     | traces error code: 0
[2026-03-09 02:22:41] 2026-03-09 01:22:40,892 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 02:22:41] 2026-03-09 01:22:41,024 [wrapper] ==== pilot stdout END ====
[2026-03-09 02:22:41] 2026-03-09 01:22:41,027 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 02:22:41] 2026-03-09 01:22:41,030 [wrapper] pilotpid: 1112866
[2026-03-09 02:22:41] 2026-03-09 01:22:41,033 [wrapper] Pilot exit status: 0
[2026-03-09 02:22:41] 2026-03-09 01:22:41,043 [wrapper] pandaids: 7043213481
[2026-03-09 02:22:41] 2026-03-09 01:22:41,171 [wrapper] cleanup supervisor_pilot 2811050 1112867
[2026-03-09 02:22:41] 2026-03-09 01:22:41,174 [wrapper] Test setup, not cleaning
[2026-03-09 02:22:41] 2026-03-09 01:22:41,176 [wrapper] apfmon messages muted
[2026-03-09 02:22:41] 2026-03-09 01:22:41,177 [wrapper] ==== wrapper stdout END ====
[2026-03-09 02:22:41] 2026-03-09 01:22:41,178 [wrapper] ==== wrapper stderr END ====
[2026-03-09 02:22:41]  *** Error codes and diagnostics ***
[2026-03-09 02:22:41]     "exeErrorCode": 0,
[2026-03-09 02:22:41]     "exeErrorDiag": "",
[2026-03-09 02:22:41]     "pilotErrorCode": 0,
[2026-03-09 02:22:41]     "pilotErrorDiag": "",
[2026-03-09 02:22:41]  *** Listing of results directory ***
[2026-03-09 02:22:41] total 483448
[2026-03-09 02:22:41] -rw-r--r--. 1 boinc boinc    584627 Mar  6 14:23 pilot3.tar.gz
[2026-03-09 02:22:41] -rwx------. 1 boinc boinc     36322 Mar  6 14:55 runpilot2-wrapper.sh
[2026-03-09 02:22:41] -rw-r--r--. 1 boinc boinc      5111 Mar  6 14:55 queuedata.json
[2026-03-09 02:22:41] -rw-r--r--. 1 boinc boinc       100 Mar  8 23:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 02:22:41] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 23:19 run_atlas
[2026-03-09 02:22:41] -rw-r--r--. 1 boinc boinc       105 Mar  8 23:19 job.xml
[2026-03-09 02:22:41] -rw-r--r--. 1 boinc boinc      6707 Mar  8 23:20 init_data.xml
[2026-03-09 02:22:41] -rw-r--r--. 2 boinc boinc 227224355 Mar  8 23:20 EVNT.48966930._000071.pool.root.1
[2026-03-09 02:22:41] -rw-r--r--. 2 boinc boinc     15845 Mar  8 23:20 start_atlas.sh
[2026-03-09 02:22:41] drwxrwx--x. 2 boinc boinc      4096 Mar  8 23:20 shared
[2026-03-09 02:22:41] -rw-r--r--. 2 boinc boinc    597957 Mar  8 23:20 input.tar.gz
[2026-03-09 02:22:41] -rw-r--r--. 1 boinc boinc         0 Mar  8 23:20 boinc_lockfile
[2026-03-09 02:22:41] -rw-r--r--. 1 boinc boinc      2564 Mar  8 23:20 pandaJob.out
[2026-03-09 02:22:41] -rw-------. 1 boinc boinc    999108 Mar  8 23:20 agis_schedconf.cvmfs.json
[2026-03-09 02:22:41] -rw-------. 1 boinc boinc       444 Mar  8 23:20 workernode_map.json
[2026-03-09 02:22:41] drwx------. 5 boinc boinc      4096 Mar  8 23:20 pilot3
[2026-03-09 02:22:41] -rw-------. 1 boinc boinc 260103098 Mar  9 02:21 HITS.48966932._001671.pool.root.1
[2026-03-09 02:22:41] -rw-r--r--. 1 boinc boinc       530 Mar  9 02:21 boinc_task_state.xml
[2026-03-09 02:22:41] -rw-------. 1 boinc boinc      1034 Mar  9 02:21 memory_monitor_summary.json
[2026-03-09 02:22:41] -rw-------. 1 boinc boinc   1511578 Mar  9 02:21 agis_ddmendpoints.agis.ALL.json
[2026-03-09 02:22:41] -rw-------. 1 boinc boinc    367238 Mar  9 02:21 log.48966932._001671.job.log.tgz.1
[2026-03-09 02:22:41] -rw-------. 1 boinc boinc      6359 Mar  9 02:21 heartbeat.json
[2026-03-09 02:22:41] -rw-------. 1 boinc boinc        95 Mar  9 02:22 pilot_heartbeat.json
[2026-03-09 02:22:41] -rw-r--r--. 1 boinc boinc        28 Mar  9 02:22 wrapper_checkpoint.txt
[2026-03-09 02:22:41] -rw-r--r--. 1 boinc boinc      8192 Mar  9 02:22 boinc_mmap_file
[2026-03-09 02:22:41] -rw-------. 1 boinc boinc      4829 Mar  9 02:22 pilotlog.txt
[2026-03-09 02:22:41] -rw-------. 1 boinc boinc   1531106 Mar  9 02:22 log.48966932._001671.job.log.1
[2026-03-09 02:22:41] -rw-------. 1 boinc boinc       357 Mar  9 02:22 output.list
[2026-03-09 02:22:41] -rw-r--r--. 1 boinc boinc       620 Mar  9 02:22 runtime_log
[2026-03-09 02:22:41] -rw-------. 1 boinc boinc   1914880 Mar  9 02:22 result.tar.gz
[2026-03-09 02:22:41] -rw-------. 1 boinc boinc       665 Mar  9 02:22 weLMDmGpkI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmxNSLDmtGyFin.diag
[2026-03-09 02:22:41] -rw-r--r--. 1 boinc boinc      9205 Mar  9 02:22 runtime_log.err
[2026-03-09 02:22:41] -rw-r--r--. 1 boinc boinc     21131 Mar  9 02:22 stderr.txt
[2026-03-09 02:22:41] HITS file was successfully produced:
[2026-03-09 02:22:41] -rw-------. 1 boinc boinc 260103098 Mar  9 02:21 shared/HITS.pool.root.1
[2026-03-09 02:22:41]  *** Contents of shared directory: ***
[2026-03-09 02:22:41] total 478388
[2026-03-09 02:22:41] -rw-r--r--. 2 boinc boinc 227224355 Mar  8 23:20 ATLAS.root_0
[2026-03-09 02:22:41] -rw-r--r--. 2 boinc boinc     15845 Mar  8 23:20 start_atlas.sh
[2026-03-09 02:22:41] -rw-r--r--. 2 boinc boinc    597957 Mar  8 23:20 input.tar.gz
[2026-03-09 02:22:41] -rw-------. 1 boinc boinc 260103098 Mar  9 02:21 HITS.pool.root.1
[2026-03-09 02:22:41] -rw-------. 1 boinc boinc   1914880 Mar  9 02:22 result.tar.gz
02:22:42 (1108267): run_atlas exited; CPU time 42361.154788
02:22:42 (1108267): called boinc_finish(0)

</stderr_txt>
]]>

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