Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:42:33 (72713): wrapper (7.7.26015): starting
11:42:33 (72713): wrapper: running run_atlas (--nthreads 12)
[2026-03-06 11:42:33] Arguments: --nthreads 12
[2026-03-06 11:42:33] Threads: 12
[2026-03-06 11:42:33] Checking for CVMFS
[2026-03-06 11:42:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 11:42:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 11:42:33] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 11:42:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 11:42:33] 2.11.5.0 1748072 137641 241564 156969 3 746 33357263 45568000 23399 130560 0 1235824038 99.826 652304357 21591 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-06 11:42:33] CVMFS is ok
[2026-03-06 11:42:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 11:42:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 11:42:33] Further information can be found at the LHC@home message board.
[2026-03-06 11:42:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 11:42:33] Checking for apptainer binary...
[2026-03-06 11:42:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-06 11:42:33] Running /usr/bin/apptainer --version
[2026-03-06 11:42:33] apptainer version 1.4.1-1.el9
[2026-03-06 11:42:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 11:42:34] wns0025.triumf.lcg
[2026-03-06 11:42:34] apptainer works
[2026-03-06 11:42:34] Set ATHENA_PROC_NUMBER=12
[2026-03-06 11:42:34] Set ATHENA_CORE_NUMBER=12
[2026-03-06 11:42:34] Starting ATLAS job with PandaID=7043370122
[2026-03-06 11:42:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 11:47:30]  *** The last 200 lines of the pilot log: ***
[2026-03-06 11:47:30] 2026-03-06 19:46:26,852 | INFO     | will not add max space = 0 B to job metrics
[2026-03-06 11:47:30] 2026-03-06 19:46:26,853 | WARNING  | wrong length of table data, x=[1772826242.0], y=[927.0] (must be same and length>=4)
[2026-03-06 11:47:30] 2026-03-06 19:46:26,853 | INFO     | could have reported an average CPU frequency of 2658 MHz (4 samples)
[2026-03-06 11:47:30] 2026-03-06 19:46:26,853 | INFO     | ..............................
[2026-03-06 11:47:30] 2026-03-06 19:46:26,853 | INFO     | . Timing measurements:
[2026-03-06 11:47:30] 2026-03-06 19:46:26,853 | INFO     | . get job = 0 s
[2026-03-06 11:47:30] 2026-03-06 19:46:26,853 | INFO     | . initial setup = 23 s
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | . payload setup = 13 s
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | . stage-in = 0 s
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | . payload execution = 31 s
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | . stage-out = 0 s
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | . log creation = 0 s
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | ..............................
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043370122/pilotlog.txt
[2026-03-06 11:47:30] 2026-03-06 19:46:26,869 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-06 11:47:30] - Log from pilotlog.txt -
[2026-03-06 11:47:30] 2026-03-06 19:46:26,851 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 11:47:30] 2026-03-06 19:46:26,852 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 11:47:30] 2026-03-06 19:46:26,852 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 11:47:30] 2026-03-06 19:46:26,852 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 11:47:30] 2026-03-06 19:46:26,852 | WARNING  | found no stored workdir sizes
[2026-03-06 11:47:30] 2026-03-06 19:46:26,852 | INFO     | will not add max space = 0 B to job metrics
[2026-03-06 11:47:30] 2026-03-06 19:46:26,853 | WARNING  | wrong length of table data, x=[1772826242.0], y=[927.0] (must be same and length>=4)
[2026-03-06 11:47:30] 2026-03-06 19:46:26,853 | INFO     | could have reported an average CPU frequency of 2658 MHz (4 samples)
[2026-03-06 11:47:30] 2026-03-06 19:46:26,853 | INFO     | ..............................
[2026-03-06 11:47:30] 2026-03-06 19:46:26,853 | INFO     | . Timing measurements:
[2026-03-06 11:47:30] 2026-03-06 19:46:26,853 | INFO     | . get job = 0 s
[2026-03-06 11:47:30] 2026-03-06 19:46:26,853 | INFO     | . initial setup = 23 s
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | . payload setup = 13 s
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | . stage-in = 0 s
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | . payload execution = 31 s
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | . stage-out = 0 s
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | . log creation = 0 s
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | ..............................
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043370122/pilotlog.txt
[2026-03-06 11:47:30] 2026-03-06 19:46:26,870 | WARNING  | 
[2026-03-06 11:47:30] [begin log extracts]
[2026-03-06 11:47:30] - Log from pilotlog.txt -
[2026-03-06 11:47:30] 2026-03-06 19:46:26,851 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 11:47:30] 2026-03-06 19:46:26,852 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 11:47:30] 2026-03-06 19:46:26,852 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 11:47:30] 2026-03-06 19:46:26,852 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 11:47:30] 2026-03-06 19:46:26,852 | WARNING  | found no stored workdir sizes
[2026-03-06 11:47:30] 2026-03-06 19:46:26,852 | INFO     | will not add max space = 0 B to job metrics
[2026-03-06 11:47:30] 2026-03-06 19:46:26,853 | WARNING  | wrong length of table data, x=[1772826242.0], y=[927.0] (must be same and length>=4)
[2026-03-06 11:47:30] 2026-03-06 19:46:26,853 | INFO     | could have reported an average CPU frequency of 2658 MHz (4 samples)
[2026-03-06 11:47:30] 2026-03-06 19:46:26,853 | INFO     | ..............................
[2026-03-06 11:47:30] 2026-03-06 19:46:26,853 | INFO     | . Timing measurements:
[2026-03-06 11:47:30] 2026-03-06 19:46:26,853 | INFO     | . get job = 0 s
[2026-03-06 11:47:30] 2026-03-06 19:46:26,853 | INFO     | . initial setup = 23 s
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | . payload setup = 13 s
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | . stage-in = 0 s
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | . payload execution = 31 s
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | . stage-out = 0 s
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | . log creation = 0 s
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | ..............................
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 11:47:30] 2026-03-06 19:46:26,854 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043370122/pilotlog.txt
[2026-03-06 11:47:30] [end log extracts]
[2026-03-06 11:47:30] 2026-03-06 19:46:26,870 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-06 11:47:30] 2026-03-06 19:46:26,871 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-06 11:47:30] 2026-03-06 19:46:26,937 | INFO     | 
[2026-03-06 11:47:30] 2026-03-06 19:46:26,937 | INFO     | job summary report
[2026-03-06 11:47:30] 2026-03-06 19:46:26,937 | INFO     | --------------------------------------------------
[2026-03-06 11:47:30] 2026-03-06 19:46:26,937 | INFO     | PanDA job id: 7043370122
[2026-03-06 11:47:30] 2026-03-06 19:46:26,937 | INFO     | task id: 48967059
[2026-03-06 11:47:30] 2026-03-06 19:46:26,937 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-06 11:44:16,229 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-06 11:47:30] 2026-03-06 19:46:26,937 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 11:47:30] 2026-03-06 19:46:26,937 | INFO     | pilot state: failed 
[2026-03-06 11:47:30] 2026-03-06 19:46:26,937 | INFO     | transexitcode: 65
[2026-03-06 11:47:30] 2026-03-06 19:46:26,937 | INFO     | exeerrorcode: 65
[2026-03-06 11:47:30] 2026-03-06 19:46:26,938 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-06 11:47:30] 2026-03-06 19:46:26,938 | INFO     | exitcode: 65
[2026-03-06 11:47:30] 2026-03-06 19:46:26,938 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-06 11:47:30] 2026-03-06 19:46:26,938 | INFO     | cpuconsumptiontime: 13 s
[2026-03-06 11:47:30] 2026-03-06 19:46:26,938 | INFO     | nevents: 0
[2026-03-06 11:47:30] 2026-03-06 19:46:26,938 | INFO     | neventsw: 0
[2026-03-06 11:47:30] 2026-03-06 19:46:26,938 | INFO     | pid: 81098
[2026-03-06 11:47:30] 2026-03-06 19:46:26,938 | INFO     | pgrp: 81098
[2026-03-06 11:47:30] 2026-03-06 19:46:26,938 | INFO     | corecount: 12
[2026-03-06 11:47:30] 2026-03-06 19:46:26,938 | INFO     | event service: False
[2026-03-06 11:47:30] 2026-03-06 19:46:26,938 | INFO     | sizes: {0: 2295578, 1: 2295784, 11: 2295812, 48: 2319031, 49: 2319007, 50: 2323327, 54: 2323483, 172: 2323649}
[2026-03-06 11:47:30] 2026-03-06 19:46:26,938 | INFO     | --------------------------------------------------
[2026-03-06 11:47:30] 2026-03-06 19:46:26,938 | INFO     | 
[2026-03-06 11:47:30] 2026-03-06 19:46:26,938 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-06 11:47:30] 2026-03-06 19:46:26,953 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 11:47:30] 2026-03-06 19:46:26,953 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 11:47:30] 2026-03-06 19:46:26,953 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 11:47:30] 2026-03-06 19:46:26,953 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 11:47:30] 2026-03-06 19:46:26,954 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 11:47:30] 2026-03-06 19:46:26,954 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 11:47:30] 2026-03-06 19:46:26,954 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 11:47:30] 2026-03-06 19:46:26,954 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 11:47:30] 2026-03-06 19:46:26,954 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 11:47:30] 2026-03-06 19:46:26,954 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 11:47:30] 2026-03-06 19:46:26,954 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 11:47:30] 2026-03-06 19:46:26,954 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 11:47:30] 2026-03-06 19:46:26,954 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 11:47:30] 2026-03-06 19:46:26,954 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 11:47:30] 2026-03-06 19:46:26,954 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 11:47:30] 2026-03-06 19:46:26,954 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 11:47:30] 2026-03-06 19:46:26,954 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 11:47:30] 2026-03-06 19:46:26,954 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 11:47:30] 2026-03-06 19:46:26,954 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 11:47:30] 2026-03-06 19:46:26,954 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 11:47:30] 2026-03-06 19:46:26,954 | INFO     | job 7043370122 has completed (purged errors)
[2026-03-06 11:47:30] 2026-03-06 19:46:26,955 | INFO     | overall cleanup function is called
[2026-03-06 11:47:30] 2026-03-06 19:46:27,961 | INFO     | --- collectZombieJob: --- 10, [81098]
[2026-03-06 11:47:30] 2026-03-06 19:46:27,962 | INFO     | zombie collector waiting for pid 81098
[2026-03-06 11:47:30] 2026-03-06 19:46:27,962 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 11:47:30] 2026-03-06 19:46:27,963 | INFO     | collected zombie processes
[2026-03-06 11:47:30] 2026-03-06 19:46:27,963 | INFO     | will attempt to kill all subprocesses of pid=81098
[2026-03-06 11:47:30] 2026-03-06 19:46:28,533 | INFO     | process IDs to be killed: [81098] (in reverse order)
[2026-03-06 11:47:30] 2026-03-06 19:46:29,033 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 11:47:30] 2026-03-06 19:46:29,033 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 11:47:30] 2026-03-06 19:46:29,076 | INFO     | did not find any defunct processes belonging to 81098
[2026-03-06 11:47:30] 2026-03-06 19:46:29,108 | INFO     | did not find any defunct processes belonging to 81098
[2026-03-06 11:47:30] 2026-03-06 19:46:29,108 | INFO     | ready for new job
[2026-03-06 11:47:30] 2026-03-06 19:46:29,109 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 11:47:30] 2026-03-06 19:46:29,110 | INFO     | **************************************
[2026-03-06 11:47:30] 2026-03-06 19:46:29,111 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 11:47:30] 2026-03-06 19:46:29,111 | INFO     | **************************************
[2026-03-06 11:47:30] 2026-03-06 19:46:29,111 | INFO     | 
[2026-03-06 11:47:30] 2026-03-06 19:46:29,130 | INFO     | architecture information:
[2026-03-06 11:47:30] 2026-03-06 19:46:29,138 | INFO     | executing command: cat /etc/os-release
[2026-03-06 11:47:30] 2026-03-06 19:46:29,195 | INFO     | cat /etc/os-release:
[2026-03-06 11:47:30] NAME="CentOS Linux"
[2026-03-06 11:47:30] VERSION="7 (Core)"
[2026-03-06 11:47:30] ID="centos"
[2026-03-06 11:47:30] ID_LIKE="rhel fedora"
[2026-03-06 11:47:30] VERSION_ID="7"
[2026-03-06 11:47:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 11:47:30] ANSI_COLOR="0;31"
[2026-03-06 11:47:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 11:47:30] HOME_URL="https://www.centos.org/"
[2026-03-06 11:47:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 11:47:30] 
[2026-03-06 11:47:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 11:47:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 11:47:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 11:47:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 11:47:30] 
[2026-03-06 11:47:30] 2026-03-06 19:46:29,195 | INFO     | **************************************
[2026-03-06 11:47:30] 2026-03-06 19:46:29,699 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-06 11:47:30] 2026-03-06 19:46:29,774 | INFO     | sufficient remaining disk space (2053190451200 B)
[2026-03-06 11:47:30] 2026-03-06 19:46:29,774 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 11:47:30] 2026-03-06 19:46:29,774 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 11:47:30] 2026-03-06 19:46:29,774 | INFO     | update_server=False
[2026-03-06 11:47:30] 2026-03-06 19:46:29,774 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 11:47:30] 2026-03-06 19:46:29,835 | INFO     | all data control threads have been joined
[2026-03-06 11:47:30] 2026-03-06 19:46:30,172 | INFO     | all job control threads have been joined
[2026-03-06 11:47:30] 2026-03-06 19:46:30,266 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-06 11:47:30] 2026-03-06 19:46:30,267 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-06 11:47:30] 2026-03-06 19:46:30,267 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 11:47:30] 2026-03-06 19:46:30,267 | INFO     | will abort loop
[2026-03-06 11:47:30] 2026-03-06 19:46:30,781 | INFO     | [job] retrieve thread has finished
[2026-03-06 11:47:30] 2026-03-06 19:46:30,822 | INFO     | [payload] validate_post thread has finished
[2026-03-06 11:47:30] 2026-03-06 19:46:30,841 | INFO     | [data] control thread has finished
[2026-03-06 11:47:30] 2026-03-06 19:46:30,887 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 11:47:30] 2026-03-06 19:46:31,088 | INFO     | [data] copytool_in thread has finished
[2026-03-06 11:47:30] 2026-03-06 19:46:31,185 | INFO     | [job] control thread has finished
[2026-03-06 11:47:30] 2026-03-06 19:46:31,209 | INFO     | all payload control threads have been joined
[2026-03-06 11:47:30] 2026-03-06 19:46:31,259 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 11:47:30] 2026-03-06 19:46:31,273 | INFO     | [job] job monitor thread has finished
[2026-03-06 11:47:30] 2026-03-06 19:46:31,619 | INFO     | [payload] failed_post thread has finished
[2026-03-06 11:47:30] 2026-03-06 19:46:31,638 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 11:47:30] 2026-03-06 19:46:31,902 | INFO     | [job] validate thread has finished
[2026-03-06 11:47:30] 2026-03-06 19:46:31,957 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 11:47:30] 2026-03-06 19:46:31,979 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 11:47:30] 2026-03-06 19:46:32,106 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 11:47:30] 2026-03-06 19:46:32,215 | INFO     | [payload] control thread has finished
[2026-03-06 11:47:30] 2026-03-06 19:46:32,217 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 11:47:30] 2026-03-06 19:46:32,963 | INFO     | [job] queue monitor thread has finished
[2026-03-06 11:47:30] 2026-03-06 19:46:33,266 | INFO     | [data] copytool_out thread has finished
[2026-03-06 11:47:30] 2026-03-06 19:46:36,226 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 11:47:30] 2026-03-06 19:46:59,511 | INFO     | PID=76444 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-06 11:47:30] 2026-03-06 19:46:59,511 | INFO     | .. there are 35 such processes running
[2026-03-06 11:47:30] 2026-03-06 19:46:59,511 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 11:47:30] 2026-03-06 19:46:59,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 11:47:30] 2026-03-06 19:46:59,512 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 11:47:30] 2026-03-06 19:47:23,480 | INFO     | [monitor] cgroup control has ended
[2026-03-06 11:47:30] 2026-03-06 19:47:24,570 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140089784280896)>', '<ExcThread(monitor, started 140089392875264)>']
[2026-03-06 11:47:30] 2026-03-06 19:47:24,660 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 11:47:30] 2026-03-06 19:47:24,661 | INFO     | [monitor] control thread has ended
[2026-03-06 11:47:30] 2026-03-06 19:47:29,596 | INFO     | all workflow threads have been joined
[2026-03-06 11:47:30] 2026-03-06 19:47:29,597 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 11:47:30] 2026-03-06 19:47:29,597 | INFO     | traces error code: 0
[2026-03-06 11:47:30] 2026-03-06 19:47:29,597 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 11:47:30] 2026-03-06 19:47:29,906 [wrapper] ==== pilot stdout END ====
[2026-03-06 11:47:30] 2026-03-06 19:47:29,933 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 11:47:30] 2026-03-06 19:47:29,973 [wrapper] pilotpid: 76444
[2026-03-06 11:47:30] 2026-03-06 19:47:29,996 [wrapper] Pilot exit status: 0
[2026-03-06 11:47:30] 2026-03-06 19:47:30,073 [wrapper] pandaids: 7043370122
[2026-03-06 11:47:30] 2026-03-06 19:47:30,195 [wrapper] cleanup supervisor_pilot   76450 76445
[2026-03-06 11:47:30] 2026-03-06 19:47:30,197 [wrapper] Test setup, not cleaning
[2026-03-06 11:47:30] 2026-03-06 19:47:30,216 [wrapper] apfmon messages muted
[2026-03-06 11:47:30] 2026-03-06 19:47:30,226 [wrapper] ==== wrapper stdout END ====
[2026-03-06 11:47:30] 2026-03-06 19:47:30,249 [wrapper] ==== wrapper stderr END ====
[2026-03-06 11:47:30]  *** Error codes and diagnostics ***
[2026-03-06 11:47:30]     "exeErrorCode": 65,
[2026-03-06 11:47:30]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-06 11:47:30]     "pilotErrorCode": 1305,
[2026-03-06 11:47:30]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-06 11:47:30]  *** Listing of results directory ***
[2026-03-06 11:47:30] total 227800
[2026-03-06 11:47:30] -rw-r--r--. 1 boinc boinc    584627 Mar  6 08:14 pilot3.tar.gz
[2026-03-06 11:47:30] -rw-r--r--. 1 boinc boinc      5111 Mar  6 08:44 queuedata.json
[2026-03-06 11:47:30] -rwx------. 1 boinc boinc     36322 Mar  6 08:44 runpilot2-wrapper.sh
[2026-03-06 11:47:30] -rw-r--r--. 1 boinc boinc       100 Mar  6 11:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 11:47:30] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 11:42 run_atlas
[2026-03-06 11:47:30] -rw-r--r--. 1 boinc boinc       105 Mar  6 11:42 job.xml
[2026-03-06 11:47:30] -rw-r--r--. 1 boinc boinc      6593 Mar  6 11:42 init_data.xml
[2026-03-06 11:47:30] -rw-r--r--. 2 boinc boinc 229119264 Mar  6 11:42 EVNT.48967057._000027.pool.root.1
[2026-03-06 11:47:30] -rw-r--r--. 2 boinc boinc     15845 Mar  6 11:42 start_atlas.sh
[2026-03-06 11:47:30] drwxrwx--x. 2 boinc boinc      4096 Mar  6 11:42 shared
[2026-03-06 11:47:30] -rw-r--r--. 2 boinc boinc    597942 Mar  6 11:42 input.tar.gz
[2026-03-06 11:47:30] -rw-r--r--. 1 boinc boinc         0 Mar  6 11:42 boinc_lockfile
[2026-03-06 11:47:30] -rw-r--r--. 1 boinc boinc      2548 Mar  6 11:42 pandaJob.out
[2026-03-06 11:47:30] -rw-------. 1 boinc boinc    999504 Mar  6 11:43 agis_schedconf.cvmfs.json
[2026-03-06 11:47:30] -rw-------. 1 boinc boinc   1521291 Mar  6 11:43 agis_ddmendpoints.agis.ALL.json
[2026-03-06 11:47:30] -rw-------. 1 boinc boinc       439 Mar  6 11:43 workernode_map.json
[2026-03-06 11:47:30] drwx------. 5 boinc boinc      4096 Mar  6 11:43 pilot3
[2026-03-06 11:47:30] -rw-r--r--. 1 boinc boinc       523 Mar  6 11:44 boinc_task_state.xml
[2026-03-06 11:47:30] -rw-------. 1 boinc boinc       967 Mar  6 11:44 memory_monitor_summary.json
[2026-03-06 11:47:30] -rw-------. 1 boinc boinc     21035 Mar  6 11:44 log.48967059._000981.job.log.tgz.1
[2026-03-06 11:47:30] -rw-------. 1 boinc boinc        95 Mar  6 11:46 pilot_heartbeat.json
[2026-03-06 11:47:30] -rw-------. 1 boinc boinc      7002 Mar  6 11:46 heartbeat.json
[2026-03-06 11:47:30] -rw-r--r--. 1 boinc boinc      8192 Mar  6 11:47 boinc_mmap_file
[2026-03-06 11:47:30] -rw-r--r--. 1 boinc boinc        22 Mar  6 11:47 wrapper_checkpoint.txt
[2026-03-06 11:47:30] -rw-------. 1 boinc boinc      5003 Mar  6 11:47 pilotlog.txt
[2026-03-06 11:47:30] -rw-------. 1 boinc boinc     82932 Mar  6 11:47 log.48967059._000981.job.log.1
[2026-03-06 11:47:30] -rw-------. 1 boinc boinc       188 Mar  6 11:47 output.list
[2026-03-06 11:47:30] -rw-r--r--. 1 boinc boinc       620 Mar  6 11:47 runtime_log
[2026-03-06 11:47:30] -rw-------. 1 boinc boinc    122880 Mar  6 11:47 result.tar.gz
[2026-03-06 11:47:30] -rw-------. 1 boinc boinc       643 Mar  6 11:47 TkjMDmpSnI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmkgQLDmXW30xm.diag
[2026-03-06 11:47:30] -rw-r--r--. 1 boinc boinc      8635 Mar  6 11:47 runtime_log.err
[2026-03-06 11:47:30] -rw-r--r--. 1 boinc boinc     21667 Mar  6 11:47 stderr.txt
[2026-03-06 11:47:30] No HITS result produced
[2026-03-06 11:47:30]  *** Contents of shared directory: ***
[2026-03-06 11:47:30] total 224476
[2026-03-06 11:47:30] -rw-r--r--. 2 boinc boinc 229119264 Mar  6 11:42 ATLAS.root_0
[2026-03-06 11:47:30] -rw-r--r--. 2 boinc boinc     15845 Mar  6 11:42 start_atlas.sh
[2026-03-06 11:47:30] -rw-r--r--. 2 boinc boinc    597942 Mar  6 11:42 input.tar.gz
[2026-03-06 11:47:30] -rw-------. 1 boinc boinc    122880 Mar  6 11:47 result.tar.gz
11:47:32 (72713): run_atlas exited; CPU time 19.545944
11:47:32 (72713): called boinc_finish(0)

</stderr_txt>
]]>

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