Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:40:30 (2687201): wrapper (7.7.26015): starting
11:40:30 (2687201): wrapper: running run_atlas (--nthreads 12)
[2026-03-06 11:40:30] Arguments: --nthreads 12
[2026-03-06 11:40:30] Threads: 12
[2026-03-06 11:40:30] Checking for CVMFS
[2026-03-06 11:40:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 11:40:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 11:40:30] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 11:40:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 11:40:31] 2.11.5.0 3817131 172518 251820 156969 1 825 33294465 45568000 22965 130560 0 1521692595 99.806 889571989 21954 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-03-06 11:40:31] CVMFS is ok
[2026-03-06 11:40:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 11:40:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 11:40:31] Further information can be found at the LHC@home message board.
[2026-03-06 11:40:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 11:40:31] Checking for apptainer binary...
[2026-03-06 11:40:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-06 11:40:31] Running /usr/bin/apptainer --version
[2026-03-06 11:40:31] apptainer version 1.4.1-1.el9
[2026-03-06 11:40:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 11:40:31] wns0035.triumf.lcg
[2026-03-06 11:40:31] apptainer works
[2026-03-06 11:40:31] Set ATHENA_PROC_NUMBER=12
[2026-03-06 11:40:31] Set ATHENA_CORE_NUMBER=12
[2026-03-06 11:40:31] Starting ATLAS job with PandaID=7043370092
[2026-03-06 11:40:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 11:45:17]  *** The last 200 lines of the pilot log: ***
[2026-03-06 11:45:17] 2026-03-06 19:44:22,881 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 11:45:17] 2026-03-06 19:44:22,882 | WARNING  | wrong length of table data, x=[1772826120.0], y=[922.0] (must be same and length>=4)
[2026-03-06 11:45:17] 2026-03-06 19:44:22,882 | INFO     | could have reported an average CPU frequency of 2765 MHz (4 samples)
[2026-03-06 11:45:17] 2026-03-06 19:44:22,883 | INFO     | ..............................
[2026-03-06 11:45:17] 2026-03-06 19:44:22,883 | INFO     | . Timing measurements:
[2026-03-06 11:45:17] 2026-03-06 19:44:22,883 | INFO     | . get job = 0 s
[2026-03-06 11:45:17] 2026-03-06 19:44:22,883 | INFO     | . initial setup = 20 s
[2026-03-06 11:45:17] 2026-03-06 19:44:22,883 | INFO     | . payload setup = 19 s
[2026-03-06 11:45:17] 2026-03-06 19:44:22,884 | INFO     | . stage-in = 0 s
[2026-03-06 11:45:17] 2026-03-06 19:44:22,884 | INFO     | . payload execution = 36 s
[2026-03-06 11:45:17] 2026-03-06 19:44:22,884 | INFO     | . stage-out = 0 s
[2026-03-06 11:45:17] 2026-03-06 19:44:22,884 | INFO     | . log creation = 0 s
[2026-03-06 11:45:17] 2026-03-06 19:44:22,884 | INFO     | ..............................
[2026-03-06 11:45:17] 2026-03-06 19:44:22,884 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 11:45:17] 2026-03-06 19:44:22,884 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043370092/pilotlog.txt
[2026-03-06 11:45:17] 2026-03-06 19:44:22,955 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-06 11:45:17] - Log from pilotlog.txt -
[2026-03-06 11:45:17] 2026-03-06 19:44:22,878 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7043370092/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 11:45:17] 2026-03-06 19:44:22,879 | INFO     | extracted standard info from prmon json
[2026-03-06 11:45:17] 2026-03-06 19:44:22,879 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 11:45:17] 2026-03-06 19:44:22,880 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 11:45:17] 2026-03-06 19:44:22,881 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 11:45:17] 2026-03-06 19:44:22,881 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 11:45:17] 2026-03-06 19:44:22,882 | WARNING  | wrong length of table data, x=[1772826120.0], y=[922.0] (must be same and length>=4)
[2026-03-06 11:45:17] 2026-03-06 19:44:22,882 | INFO     | could have reported an average CPU frequency of 2765 MHz (4 samples)
[2026-03-06 11:45:17] 2026-03-06 19:44:22,883 | INFO     | ..............................
[2026-03-06 11:45:17] 2026-03-06 19:44:22,883 | INFO     | . Timing measurements:
[2026-03-06 11:45:17] 2026-03-06 19:44:22,883 | INFO     | . get job = 0 s
[2026-03-06 11:45:17] 2026-03-06 19:44:22,883 | INFO     | . initial setup = 20 s
[2026-03-06 11:45:17] 2026-03-06 19:44:22,883 | INFO     | . payload setup = 19 s
[2026-03-06 11:45:17] 2026-03-06 19:44:22,884 | INFO     | . stage-in = 0 s
[2026-03-06 11:45:17] 2026-03-06 19:44:22,884 | INFO     | . payload execution = 36 s
[2026-03-06 11:45:17] 2026-03-06 19:44:22,884 | INFO     | . stage-out = 0 s
[2026-03-06 11:45:17] 2026-03-06 19:44:22,884 | INFO     | . log creation = 0 s
[2026-03-06 11:45:17] 2026-03-06 19:44:22,884 | INFO     | ..............................
[2026-03-06 11:45:17] 2026-03-06 19:44:22,884 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 11:45:17] 2026-03-06 19:44:22,884 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043370092/pilotlog.txt
[2026-03-06 11:45:17] 2026-03-06 19:44:22,956 | WARNING  | 
[2026-03-06 11:45:17] [begin log extracts]
[2026-03-06 11:45:17] - Log from pilotlog.txt -
[2026-03-06 11:45:17] 2026-03-06 19:44:22,878 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7043370092/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 11:45:17] 2026-03-06 19:44:22,879 | INFO     | extracted standard info from prmon json
[2026-03-06 11:45:17] 2026-03-06 19:44:22,879 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 11:45:17] 2026-03-06 19:44:22,880 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 11:45:17] 2026-03-06 19:44:22,881 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 11:45:17] 2026-03-06 19:44:22,881 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 11:45:17] 2026-03-06 19:44:22,882 | WARNING  | wrong length of table data, x=[1772826120.0], y=[922.0] (must be same and length>=4)
[2026-03-06 11:45:17] 2026-03-06 19:44:22,882 | INFO     | could have reported an average CPU frequency of 2765 MHz (4 samples)
[2026-03-06 11:45:17] 2026-03-06 19:44:22,883 | INFO     | ..............................
[2026-03-06 11:45:17] 2026-03-06 19:44:22,883 | INFO     | . Timing measurements:
[2026-03-06 11:45:17] 2026-03-06 19:44:22,883 | INFO     | . get job = 0 s
[2026-03-06 11:45:17] 2026-03-06 19:44:22,883 | INFO     | . initial setup = 20 s
[2026-03-06 11:45:17] 2026-03-06 19:44:22,883 | INFO     | . payload setup = 19 s
[2026-03-06 11:45:17] 2026-03-06 19:44:22,884 | INFO     | . stage-in = 0 s
[2026-03-06 11:45:17] 2026-03-06 19:44:22,884 | INFO     | . payload execution = 36 s
[2026-03-06 11:45:17] 2026-03-06 19:44:22,884 | INFO     | . stage-out = 0 s
[2026-03-06 11:45:17] 2026-03-06 19:44:22,884 | INFO     | . log creation = 0 s
[2026-03-06 11:45:17] 2026-03-06 19:44:22,884 | INFO     | ..............................
[2026-03-06 11:45:17] 2026-03-06 19:44:22,884 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 11:45:17] 2026-03-06 19:44:22,884 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043370092/pilotlog.txt
[2026-03-06 11:45:17] [end log extracts]
[2026-03-06 11:45:17] 2026-03-06 19:44:22,956 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-06 11:45:17] 2026-03-06 19:44:22,957 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-06 11:45:17] 2026-03-06 19:44:23,309 | INFO     | 
[2026-03-06 11:45:17] 2026-03-06 19:44:23,309 | INFO     | job summary report
[2026-03-06 11:45:17] 2026-03-06 19:44:23,309 | INFO     | --------------------------------------------------
[2026-03-06 11:45:17] 2026-03-06 19:44:23,309 | INFO     | PanDA job id: 7043370092
[2026-03-06 11:45:17] 2026-03-06 19:44:23,309 | INFO     | task id: 48967059
[2026-03-06 11:45:17] 2026-03-06 19:44:23,309 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-06 11:42:15,862 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-06 11:45:17] 2026-03-06 19:44:23,310 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 11:45:17] 2026-03-06 19:44:23,310 | INFO     | pilot state: failed 
[2026-03-06 11:45:17] 2026-03-06 19:44:23,310 | INFO     | transexitcode: 65
[2026-03-06 11:45:17] 2026-03-06 19:44:23,310 | INFO     | exeerrorcode: 65
[2026-03-06 11:45:17] 2026-03-06 19:44:23,310 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-06 11:45:17] 2026-03-06 19:44:23,310 | INFO     | exitcode: 65
[2026-03-06 11:45:17] 2026-03-06 19:44:23,310 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-06 11:45:17] 2026-03-06 19:44:23,310 | INFO     | cpuconsumptiontime: 13 s
[2026-03-06 11:45:17] 2026-03-06 19:44:23,310 | INFO     | nevents: 0
[2026-03-06 11:45:17] 2026-03-06 19:44:23,310 | INFO     | neventsw: 0
[2026-03-06 11:45:17] 2026-03-06 19:44:23,310 | INFO     | pid: 2706085
[2026-03-06 11:45:17] 2026-03-06 19:44:23,310 | INFO     | pgrp: 2706085
[2026-03-06 11:45:17] 2026-03-06 19:44:23,310 | INFO     | corecount: 12
[2026-03-06 11:45:17] 2026-03-06 19:44:23,310 | INFO     | event service: False
[2026-03-06 11:45:17] 2026-03-06 19:44:23,310 | INFO     | sizes: {0: 2295345, 1: 2295806, 12: 2295806, 60: 2319228, 62: 2323608, 179: 2323746}
[2026-03-06 11:45:17] 2026-03-06 19:44:23,310 | INFO     | --------------------------------------------------
[2026-03-06 11:45:17] 2026-03-06 19:44:23,310 | INFO     | 
[2026-03-06 11:45:17] 2026-03-06 19:44:23,310 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-06 11:45:17] 2026-03-06 19:44:23,406 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 11:45:17] 2026-03-06 19:44:23,406 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 11:45:17] 2026-03-06 19:44:23,406 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 11:45:17] 2026-03-06 19:44:23,407 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 11:45:17] 2026-03-06 19:44:23,407 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 11:45:17] 2026-03-06 19:44:23,407 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 11:45:17] 2026-03-06 19:44:23,407 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 11:45:17] 2026-03-06 19:44:23,407 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 11:45:17] 2026-03-06 19:44:23,407 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 11:45:17] 2026-03-06 19:44:23,407 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 11:45:17] 2026-03-06 19:44:23,407 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 11:45:17] 2026-03-06 19:44:23,407 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 11:45:17] 2026-03-06 19:44:23,407 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 11:45:17] 2026-03-06 19:44:23,407 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 11:45:17] 2026-03-06 19:44:23,407 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 11:45:17] 2026-03-06 19:44:23,407 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 11:45:17] 2026-03-06 19:44:23,407 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 11:45:17] 2026-03-06 19:44:23,407 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 11:45:17] 2026-03-06 19:44:23,407 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 11:45:17] 2026-03-06 19:44:23,407 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 11:45:17] 2026-03-06 19:44:23,407 | INFO     | job 7043370092 has completed (purged errors)
[2026-03-06 11:45:17] 2026-03-06 19:44:23,408 | INFO     | overall cleanup function is called
[2026-03-06 11:45:17] 2026-03-06 19:44:24,413 | INFO     | --- collectZombieJob: --- 10, [2706085]
[2026-03-06 11:45:17] 2026-03-06 19:44:24,415 | INFO     | zombie collector waiting for pid 2706085
[2026-03-06 11:45:17] 2026-03-06 19:44:24,416 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 11:45:17] 2026-03-06 19:44:24,416 | INFO     | collected zombie processes
[2026-03-06 11:45:17] 2026-03-06 19:44:24,416 | INFO     | will attempt to kill all subprocesses of pid=2706085
[2026-03-06 11:45:17] 2026-03-06 19:44:24,678 | INFO     | process IDs to be killed: [2706085] (in reverse order)
[2026-03-06 11:45:17] 2026-03-06 19:44:24,909 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 11:45:17] 2026-03-06 19:44:24,910 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 11:45:17] 2026-03-06 19:44:24,921 | INFO     | did not find any defunct processes belonging to 2706085
[2026-03-06 11:45:17] 2026-03-06 19:44:24,930 | INFO     | did not find any defunct processes belonging to 2706085
[2026-03-06 11:45:17] 2026-03-06 19:44:24,932 | INFO     | ready for new job
[2026-03-06 11:45:17] 2026-03-06 19:44:24,932 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 11:45:17] 2026-03-06 19:44:24,934 | INFO     | **************************************
[2026-03-06 11:45:17] 2026-03-06 19:44:24,934 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 11:45:17] 2026-03-06 19:44:24,934 | INFO     | **************************************
[2026-03-06 11:45:17] 2026-03-06 19:44:24,934 | INFO     | 
[2026-03-06 11:45:17] 2026-03-06 19:44:24,936 | INFO     | architecture information:
[2026-03-06 11:45:17] 2026-03-06 19:44:24,936 | INFO     | executing command: cat /etc/os-release
[2026-03-06 11:45:17] 2026-03-06 19:44:24,983 | INFO     | cat /etc/os-release:
[2026-03-06 11:45:17] NAME="CentOS Linux"
[2026-03-06 11:45:17] VERSION="7 (Core)"
[2026-03-06 11:45:17] ID="centos"
[2026-03-06 11:45:17] ID_LIKE="rhel fedora"
[2026-03-06 11:45:17] VERSION_ID="7"
[2026-03-06 11:45:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 11:45:17] ANSI_COLOR="0;31"
[2026-03-06 11:45:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 11:45:17] HOME_URL="https://www.centos.org/"
[2026-03-06 11:45:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 11:45:17] 
[2026-03-06 11:45:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 11:45:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 11:45:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 11:45:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 11:45:17] 
[2026-03-06 11:45:17] 2026-03-06 19:44:24,983 | INFO     | **************************************
[2026-03-06 11:45:17] 2026-03-06 19:44:25,492 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-06 11:45:17] 2026-03-06 19:44:25,532 | INFO     | sufficient remaining disk space (2185211412480 B)
[2026-03-06 11:45:17] 2026-03-06 19:44:25,532 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 11:45:17] 2026-03-06 19:44:25,533 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 11:45:17] 2026-03-06 19:44:25,533 | INFO     | update_server=False
[2026-03-06 11:45:17] 2026-03-06 19:44:25,533 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 11:45:17] 2026-03-06 19:44:25,541 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 11:45:17] 2026-03-06 19:44:25,543 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-06 11:45:17] 2026-03-06 19:44:25,543 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-06 11:45:17] 2026-03-06 19:44:25,543 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 11:45:17] 2026-03-06 19:44:25,544 | INFO     | will abort loop
[2026-03-06 11:45:17] 2026-03-06 19:44:25,974 | INFO     | all data control threads have been joined
[2026-03-06 11:45:17] 2026-03-06 19:44:26,549 | INFO     | [job] retrieve thread has finished
[2026-03-06 11:45:17] 2026-03-06 19:44:26,551 | INFO     | [job] job monitor thread has finished
[2026-03-06 11:45:17] 2026-03-06 19:44:26,569 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 11:45:17] 2026-03-06 19:44:26,691 | INFO     | [payload] validate_post thread has finished
[2026-03-06 11:45:17] 2026-03-06 19:44:26,816 | INFO     | all payload control threads have been joined
[2026-03-06 11:45:17] 2026-03-06 19:44:26,980 | INFO     | [data] control thread has finished
[2026-03-06 11:45:17] 2026-03-06 19:44:27,102 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 11:45:17] 2026-03-06 19:44:27,225 | INFO     | all job control threads have been joined
[2026-03-06 11:45:17] 2026-03-06 19:44:27,310 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 11:45:17] 2026-03-06 19:44:27,310 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 11:45:17] 2026-03-06 19:44:27,352 | INFO     | [job] validate thread has finished
[2026-03-06 11:45:17] 2026-03-06 19:44:27,416 | INFO     | [data] copytool_in thread has finished
[2026-03-06 11:45:17] 2026-03-06 19:44:27,457 | INFO     | [payload] failed_post thread has finished
[2026-03-06 11:45:17] 2026-03-06 19:44:27,609 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 11:45:17] 2026-03-06 19:44:27,822 | INFO     | [payload] control thread has finished
[2026-03-06 11:45:17] 2026-03-06 19:44:28,231 | INFO     | [job] control thread has finished
[2026-03-06 11:45:17] 2026-03-06 19:44:28,251 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 11:45:17] 2026-03-06 19:44:28,576 | INFO     | [data] copytool_out thread has finished
[2026-03-06 11:45:17] 2026-03-06 19:44:29,257 | INFO     | [job] queue monitor thread has finished
[2026-03-06 11:45:17] 2026-03-06 19:44:29,557 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 11:45:17] 2026-03-06 19:44:55,125 | INFO     | PID=2693814 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 11:45:17] 2026-03-06 19:44:55,125 | INFO     | .. there are 35 such processes running
[2026-03-06 11:45:17] 2026-03-06 19:44:55,126 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 11:45:17] 2026-03-06 19:44:55,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 11:45:17] 2026-03-06 19:44:55,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 11:45:17] 2026-03-06 19:45:10,922 | INFO     | [monitor] cgroup control has ended
[2026-03-06 11:45:17] 2026-03-06 19:45:11,452 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139701902653248)>', '<ExcThread(monitor, started 139700958377728)>']
[2026-03-06 11:45:17] 2026-03-06 19:45:12,232 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 11:45:17] 2026-03-06 19:45:12,232 | INFO     | [monitor] control thread has ended
[2026-03-06 11:45:17] 2026-03-06 19:45:16,478 | INFO     | all workflow threads have been joined
[2026-03-06 11:45:17] 2026-03-06 19:45:16,478 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 11:45:17] 2026-03-06 19:45:16,479 | INFO     | traces error code: 0
[2026-03-06 11:45:17] 2026-03-06 19:45:16,479 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 11:45:17] 2026-03-06 19:45:16,583 [wrapper] ==== pilot stdout END ====
[2026-03-06 11:45:17] 2026-03-06 19:45:16,585 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 11:45:17] 2026-03-06 19:45:16,586 [wrapper] pilotpid: 2693814
[2026-03-06 11:45:17] 2026-03-06 19:45:16,588 [wrapper] Pilot exit status: 0
[2026-03-06 11:45:17] 2026-03-06 19:45:16,635 [wrapper] pandaids: 7043370092
[2026-03-06 11:45:17] 2026-03-06 19:45:16,682 [wrapper] cleanup supervisor_pilot 2693820 2693815
[2026-03-06 11:45:17] 2026-03-06 19:45:16,684 [wrapper] Test setup, not cleaning
[2026-03-06 11:45:17] 2026-03-06 19:45:16,686 [wrapper] apfmon messages muted
[2026-03-06 11:45:17] 2026-03-06 19:45:16,688 [wrapper] ==== wrapper stdout END ====
[2026-03-06 11:45:17] 2026-03-06 19:45:16,690 [wrapper] ==== wrapper stderr END ====
[2026-03-06 11:45:17]  *** Error codes and diagnostics ***
[2026-03-06 11:45:17]     "exeErrorCode": 65,
[2026-03-06 11:45:17]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-06 11:45:17]     "pilotErrorCode": 1305,
[2026-03-06 11:45:17]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-06 11:45:17]  *** Listing of results directory ***
[2026-03-06 11:45:17] total 225460
[2026-03-06 11:45:17] -rw-r--r--. 1 boinc boinc    584627 Mar  6 08:14 pilot3.tar.gz
[2026-03-06 11:45:17] -rw-r--r--. 1 boinc boinc      5111 Mar  6 08:44 queuedata.json
[2026-03-06 11:45:17] -rwx------. 1 boinc boinc     36322 Mar  6 08:44 runpilot2-wrapper.sh
[2026-03-06 11:45:17] -rw-r--r--. 1 boinc boinc       100 Mar  6 11:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 11:45:17] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 11:40 run_atlas
[2026-03-06 11:45:17] -rw-r--r--. 1 boinc boinc       105 Mar  6 11:40 job.xml
[2026-03-06 11:45:17] -rw-r--r--. 1 boinc boinc      6594 Mar  6 11:40 init_data.xml
[2026-03-06 11:45:17] -rw-r--r--. 2 boinc boinc 226727203 Mar  6 11:40 EVNT.48967057._000026.pool.root.1
[2026-03-06 11:45:17] -rw-r--r--. 2 boinc boinc     15845 Mar  6 11:40 start_atlas.sh
[2026-03-06 11:45:17] drwxrwx--x. 2 boinc boinc      4096 Mar  6 11:40 shared
[2026-03-06 11:45:17] -rw-r--r--. 2 boinc boinc    597939 Mar  6 11:40 input.tar.gz
[2026-03-06 11:45:17] -rw-r--r--. 1 boinc boinc         0 Mar  6 11:40 boinc_lockfile
[2026-03-06 11:45:17] -rw-r--r--. 1 boinc boinc      2545 Mar  6 11:40 pandaJob.out
[2026-03-06 11:45:17] -rw-------. 1 boinc boinc    999504 Mar  6 11:40 agis_schedconf.cvmfs.json
[2026-03-06 11:45:17] -rw-------. 1 boinc boinc   1521291 Mar  6 11:40 agis_ddmendpoints.agis.ALL.json
[2026-03-06 11:45:17] -rw-------. 1 boinc boinc       444 Mar  6 11:41 workernode_map.json
[2026-03-06 11:45:17] drwx------. 5 boinc boinc      4096 Mar  6 11:41 pilot3
[2026-03-06 11:45:17] -rw-r--r--. 1 boinc boinc       523 Mar  6 11:42 boinc_task_state.xml
[2026-03-06 11:45:17] -rw-------. 1 boinc boinc       967 Mar  6 11:42 memory_monitor_summary.json
[2026-03-06 11:45:17] -rw-------. 1 boinc boinc     21232 Mar  6 11:42 log.48967059._000951.job.log.tgz.1
[2026-03-06 11:45:17] -rw-------. 1 boinc boinc      7046 Mar  6 11:44 heartbeat.json
[2026-03-06 11:45:17] -rw-------. 1 boinc boinc        95 Mar  6 11:44 pilot_heartbeat.json
[2026-03-06 11:45:17] -rw-r--r--. 1 boinc boinc      8192 Mar  6 11:45 boinc_mmap_file
[2026-03-06 11:45:17] -rw-r--r--. 1 boinc boinc        22 Mar  6 11:45 wrapper_checkpoint.txt
[2026-03-06 11:45:17] -rw-------. 1 boinc boinc      5005 Mar  6 11:45 pilotlog.txt
[2026-03-06 11:45:17] -rw-------. 1 boinc boinc     85640 Mar  6 11:45 log.48967059._000951.job.log.1
[2026-03-06 11:45:17] -rw-------. 1 boinc boinc       188 Mar  6 11:45 output.list
[2026-03-06 11:45:17] -rw-r--r--. 1 boinc boinc       620 Mar  6 11:45 runtime_log
[2026-03-06 11:45:17] -rw-------. 1 boinc boinc    122880 Mar  6 11:45 result.tar.gz
[2026-03-06 11:45:17] -rw-r--r--. 1 boinc boinc      8635 Mar  6 11:45 runtime_log.err
[2026-03-06 11:45:17] -rw-------. 1 boinc boinc       644 Mar  6 11:45 j1nLDmpSnI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmRgQLDmWxv3Vm.diag
[2026-03-06 11:45:17] -rw-r--r--. 1 boinc boinc     21795 Mar  6 11:45 stderr.txt
[2026-03-06 11:45:17] No HITS result produced
[2026-03-06 11:45:17]  *** Contents of shared directory: ***
[2026-03-06 11:45:17] total 222136
[2026-03-06 11:45:17] -rw-r--r--. 2 boinc boinc 226727203 Mar  6 11:40 ATLAS.root_0
[2026-03-06 11:45:17] -rw-r--r--. 2 boinc boinc     15845 Mar  6 11:40 start_atlas.sh
[2026-03-06 11:45:17] -rw-r--r--. 2 boinc boinc    597939 Mar  6 11:40 input.tar.gz
[2026-03-06 11:45:17] -rw-------. 1 boinc boinc    122880 Mar  6 11:45 result.tar.gz
11:45:19 (2687201): run_atlas exited; CPU time 20.089230
11:45:19 (2687201): called boinc_finish(0)

</stderr_txt>
]]>

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