Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:52:20 (2885603): wrapper (7.7.26015): starting
17:52:20 (2885603): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 17:52:20] Arguments: --nthreads 4
[2026-03-07 17:52:20] Threads: 4
[2026-03-07 17:52:20] Checking for CVMFS
[2026-03-07 17:52:20] No cvmfs_config command found, will try listing directly
[2026-03-07 17:52:20] CVMFS is ok
[2026-03-07 17:52:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 17:52:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 17:52:20] Further information can be found at the LHC@home message board.
[2026-03-07 17:52:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 17:52:20] Checking for apptainer binary...
[2026-03-07 17:52:20] which: no apptainer in ((null))
[2026-03-07 17:52:20] apptainer is not installed, using version from CVMFS
[2026-03-07 17:52:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 17:52:21] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot212/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-07 17:52:21] apptainer works
[2026-03-07 17:52:21] Set ATHENA_PROC_NUMBER=4
[2026-03-07 17:52:21] Set ATHENA_CORE_NUMBER=4
[2026-03-07 17:52:21] Starting ATLAS job with PandaID=7043172394
[2026-03-07 17:52:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot212/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 19:40:30]  *** The last 200 lines of the pilot log: ***
[2026-03-07 19:40:30] 2026-03-07 18:39:38,275 | INFO     | mean y: 2329795.4545454546
[2026-03-07 19:40:30] 2026-03-07 18:39:38,275 | INFO     | intersect: -6306734235.161063
[2026-03-07 19:40:30] 2026-03-07 18:39:38,275 | INFO     | chi2: 0.00032540789609629547
[2026-03-07 19:40:30] 2026-03-07 18:39:38,275 | INFO     | current chi2=0.00032540789609629547 (change=99.97028197260167 %)
[2026-03-07 19:40:30] 2026-03-07 18:39:38,275 | INFO     | sum of square deviations: 257521107.5
[2026-03-07 19:40:30] 2026-03-07 18:39:38,276 | INFO     | sum of deviations: 737503023.5000002
[2026-03-07 19:40:30] 2026-03-07 18:39:38,276 | INFO     | mean x: 1772905896.5
[2026-03-07 19:40:30] 2026-03-07 18:39:38,276 | INFO     | mean y: 2330961.64893617
[2026-03-07 19:40:30] 2026-03-07 18:39:38,276 | INFO     | intersect: -5075013849.978703
[2026-03-07 19:40:30] 2026-03-07 18:39:38,276 | INFO     | chi2: 0.0001477284037721309
[2026-03-07 19:40:30] 2026-03-07 18:39:38,276 | INFO     | current chi2=0.0001477284037721309 (change=54.602083863258564 %)
[2026-03-07 19:40:30] 2026-03-07 18:39:38,276 | INFO     | sum of square deviations: 218571540.0
[2026-03-07 19:40:30] 2026-03-07 18:39:38,276 | INFO     | sum of deviations: 527085750.0
[2026-03-07 19:40:30] 2026-03-07 18:39:38,276 | INFO     | mean x: 1772906049.0
[2026-03-07 19:40:30] 2026-03-07 18:39:38,276 | INFO     | mean y: 2331788.9101123596
[2026-03-07 19:40:30] 2026-03-07 18:39:38,276 | INFO     | intersect: -4273035052.1557546
[2026-03-07 19:40:30] 2026-03-07 18:39:38,276 | INFO     | chi2: 8.47469253379936e-05
[2026-03-07 19:40:30] 2026-03-07 18:39:38,276 | INFO     | current chi2=8.47469253379936e-05 (change=42.633289757388425 %)
[2026-03-07 19:40:30] 2026-03-07 18:39:38,276 | INFO     | sum of square deviations: 183761585.0
[2026-03-07 19:40:30] 2026-03-07 18:39:38,277 | INFO     | sum of deviations: 354602790.5
[2026-03-07 19:40:30] 2026-03-07 18:39:38,277 | INFO     | mean x: 1772906201.5
[2026-03-07 19:40:30] 2026-03-07 18:39:38,277 | INFO     | mean y: 2332536.3928571427
[2026-03-07 19:40:30] 2026-03-07 18:39:38,277 | INFO     | intersect: -3418825843.0728803
[2026-03-07 19:40:30] 2026-03-07 18:39:38,277 | INFO     | chi2: 1.1746937872376917e-05
[2026-03-07 19:40:30] 2026-03-07 18:39:38,277 | INFO     | current chi2=1.1746937872376917e-05 (change=86.13880347218856 %)
[2026-03-07 19:40:30] 2026-03-07 18:39:38,277 | INFO     | sum of square deviations: 152858680.0
[2026-03-07 19:40:30] 2026-03-07 18:39:38,277 | INFO     | sum of deviations: 307441098.0
[2026-03-07 19:40:30] 2026-03-07 18:39:38,277 | INFO     | mean x: 1772906354.0
[2026-03-07 19:40:30] 2026-03-07 18:39:38,277 | INFO     | mean y: 2332769.4683544305
[2026-03-07 19:40:30] 2026-03-07 18:39:38,277 | INFO     | intersect: -3563472431.2892127
[2026-03-07 19:40:30] 2026-03-07 18:39:38,277 | INFO     | chi2: 1.060323415970596e-05
[2026-03-07 19:40:30] 2026-03-07 18:39:38,277 | INFO     | current chi2=1.060323415970596e-05 (change=9.736185932849716 %)
[2026-03-07 19:40:30] 2026-03-07 18:39:38,277 | INFO     | left removable region: 50
[2026-03-07 19:40:30] 2026-03-07 18:39:38,277 | INFO     | sum of square deviations: 34277852.0
[2026-03-07 19:40:30] 2026-03-07 18:39:38,277 | INFO     | sum of deviations: 63161657.000000015
[2026-03-07 19:40:30] 2026-03-07 18:39:38,277 | INFO     | mean x: 1772906933.5
[2026-03-07 19:40:30] 2026-03-07 18:39:38,278 | INFO     | mean y: 2334142.6666666665
[2026-03-07 19:40:30] 2026-03-07 18:39:38,278 | INFO     | intersect: -3264490733.8351874
[2026-03-07 19:40:30] 2026-03-07 18:39:38,278 | INFO     | chi2: 6.618748413886461e-06
[2026-03-07 19:40:30] 2026-03-07 18:39:38,278 | INFO     | current memory leak: 1.84 B/s (using 48 data points, chi2=0.00)
[2026-03-07 19:40:30] 2026-03-07 18:39:38,278 | INFO     | could have reported an average CPU frequency of 3565 MHz (7 samples)
[2026-03-07 19:40:30] 2026-03-07 18:39:38,278 | INFO     | ..............................
[2026-03-07 19:40:30] 2026-03-07 18:39:38,278 | INFO     | . Timing measurements:
[2026-03-07 19:40:30] 2026-03-07 18:39:38,278 | INFO     | . get job = 0 s
[2026-03-07 19:40:30] 2026-03-07 18:39:38,278 | INFO     | . initial setup = 19 s
[2026-03-07 19:40:30] 2026-03-07 18:39:38,278 | INFO     | . payload setup = 22 s
[2026-03-07 19:40:30] 2026-03-07 18:39:38,278 | INFO     | . stage-in = 0 s
[2026-03-07 19:40:30] 2026-03-07 18:39:38,278 | INFO     | . payload execution = 6343 s
[2026-03-07 19:40:30] 2026-03-07 18:39:38,278 | INFO     | . stage-out = 0 s
[2026-03-07 19:40:30] 2026-03-07 18:39:38,278 | INFO     | . log creation = 0 s
[2026-03-07 19:40:30] 2026-03-07 18:39:38,278 | INFO     | ..............................
[2026-03-07 19:40:30] 2026-03-07 18:39:38,331 | INFO     | 
[2026-03-07 19:40:30] 2026-03-07 18:39:38,331 | INFO     | job summary report
[2026-03-07 19:40:30] 2026-03-07 18:39:38,331 | INFO     | --------------------------------------------------
[2026-03-07 19:40:30] 2026-03-07 18:39:38,331 | INFO     | PanDA job id: 7043172394
[2026-03-07 19:40:30] 2026-03-07 18:39:38,331 | INFO     | task id: 48966988
[2026-03-07 19:40:30] 2026-03-07 18:39:38,331 | INFO     | errors: (none)
[2026-03-07 19:40:30] 2026-03-07 18:39:38,331 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 19:40:30] 2026-03-07 18:39:38,331 | INFO     | pilot state: finished 
[2026-03-07 19:40:30] 2026-03-07 18:39:38,331 | INFO     | transexitcode: 0
[2026-03-07 19:40:30] 2026-03-07 18:39:38,331 | INFO     | exeerrorcode: 0
[2026-03-07 19:40:30] 2026-03-07 18:39:38,331 | INFO     | exeerrordiag: 
[2026-03-07 19:40:30] 2026-03-07 18:39:38,331 | INFO     | exitcode: 0
[2026-03-07 19:40:30] 2026-03-07 18:39:38,331 | INFO     | exitmsg: OK
[2026-03-07 19:40:30] 2026-03-07 18:39:38,331 | INFO     | cpuconsumptiontime: 23885 s
[2026-03-07 19:40:30] 2026-03-07 18:39:38,331 | INFO     | nevents: 400
[2026-03-07 19:40:30] 2026-03-07 18:39:38,331 | INFO     | neventsw: 0
[2026-03-07 19:40:30] 2026-03-07 18:39:38,331 | INFO     | pid: 2907952
[2026-03-07 19:40:30] 2026-03-07 18:39:38,331 | INFO     | pgrp: 2907952
[2026-03-07 19:40:30] 2026-03-07 18:39:38,331 | INFO     | corecount: 4
[2026-03-07 19:40:30] 2026-03-07 18:39:38,331 | INFO     | event service: False
[2026-03-07 19:40:30] 2026-03-07 18:39:38,331 | INFO     | sizes: {0: 2295854, 11: 2295854, 6369: 2322879, 6370: 2322878, 6371: 2332012, 6372: 2332150}
[2026-03-07 19:40:30] 2026-03-07 18:39:38,332 | INFO     | --------------------------------------------------
[2026-03-07 19:40:30] 2026-03-07 18:39:38,332 | INFO     | 
[2026-03-07 19:40:30] 2026-03-07 18:39:38,332 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot212/slots/0
[2026-03-07 19:40:30] 2026-03-07 18:39:38,353 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 19:40:30] 2026-03-07 18:39:38,353 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 19:40:30] 2026-03-07 18:39:38,353 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 19:40:30] 2026-03-07 18:39:38,353 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 19:40:30] 2026-03-07 18:39:38,353 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 19:40:30] 2026-03-07 18:39:38,353 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 19:40:30] 2026-03-07 18:39:38,353 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 19:40:30] 2026-03-07 18:39:38,353 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 19:40:30] 2026-03-07 18:39:38,354 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 19:40:30] 2026-03-07 18:39:38,354 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 19:40:30] 2026-03-07 18:39:38,354 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 19:40:30] 2026-03-07 18:39:38,354 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 19:40:30] 2026-03-07 18:39:38,354 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 19:40:30] 2026-03-07 18:39:38,354 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 19:40:30] 2026-03-07 18:39:38,354 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 19:40:30] 2026-03-07 18:39:38,354 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 19:40:30] 2026-03-07 18:39:38,354 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 19:40:30] 2026-03-07 18:39:38,354 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 19:40:30] 2026-03-07 18:39:38,354 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 19:40:30] 2026-03-07 18:39:38,354 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 19:40:30] 2026-03-07 18:39:38,354 | INFO     | job 7043172394 has completed (purged errors)
[2026-03-07 19:40:30] 2026-03-07 18:39:38,354 | INFO     | overall cleanup function is called
[2026-03-07 19:40:30] 2026-03-07 18:39:38,805 | WARNING  | process 2907952 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 19:40:30] 2026-03-07 18:39:39,115 | INFO     | using path: /var/lib/boinc/var/slot212/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 19:40:30] 2026-03-07 18:39:39,115 | INFO     | using path: /var/lib/boinc/var/slot212/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 19:40:30] 2026-03-07 18:39:39,115 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-07 19:40:30] 2026-03-07 18:39:39,115 | WARNING  | maxPSS not found in memory monitor output
[2026-03-07 19:40:30] 2026-03-07 18:39:39,116 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7043172394/payload.stdout) since it has not been created yet
[2026-03-07 19:40:30] 2026-03-07 18:39:39,116 | INFO     | executing command: df -mP /var/lib/boinc/var/slot212/slots/0
[2026-03-07 19:40:30] 2026-03-07 18:39:39,134 | INFO     | sufficient remaining disk space (21231566848 B)
[2026-03-07 19:40:30] 2026-03-07 18:39:39,134 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-07 19:40:30] 2026-03-07 18:39:39,134 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7043172394/HITS.48966988._008232.pool.root.1 since it does not exist
[2026-03-07 19:40:30] 2026-03-07 18:39:39,360 | INFO     | --- collectZombieJob: --- 10, [2907952]
[2026-03-07 19:40:30] 2026-03-07 18:39:39,361 | INFO     | zombie collector waiting for pid 2907952
[2026-03-07 19:40:30] 2026-03-07 18:39:39,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 19:40:30] 2026-03-07 18:39:39,361 | INFO     | collected zombie processes
[2026-03-07 19:40:30] 2026-03-07 18:39:39,361 | INFO     | will attempt to kill all subprocesses of pid=2907952
[2026-03-07 19:40:30] 2026-03-07 18:39:40,016 | INFO     | number of running child processes to parent process 2907952: 1
[2026-03-07 19:40:30] 2026-03-07 18:39:40,017 | INFO     | maximum number of monitored processes: 6
[2026-03-07 19:40:30] 2026-03-07 18:39:40,017 | INFO     | aborting job monitoring since job object (job id=7043172394) has expired
[2026-03-07 19:40:30] 2026-03-07 18:39:40,192 | INFO     | process IDs to be killed: [2907952] (in reverse order)
[2026-03-07 19:40:30] 2026-03-07 18:39:40,404 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 19:40:30] 2026-03-07 18:39:40,404 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 19:40:30] 2026-03-07 18:39:40,432 | INFO     | did not find any defunct processes belonging to 2907952
[2026-03-07 19:40:30] 2026-03-07 18:39:40,458 | INFO     | did not find any defunct processes belonging to 2907952
[2026-03-07 19:40:30] 2026-03-07 18:39:40,459 | INFO     | ready for new job
[2026-03-07 19:40:30] 2026-03-07 18:39:40,459 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 19:40:30] 2026-03-07 18:39:40,460 | INFO     | **************************************
[2026-03-07 19:40:30] 2026-03-07 18:39:40,460 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 19:40:30] 2026-03-07 18:39:40,460 | INFO     | **************************************
[2026-03-07 19:40:30] 2026-03-07 18:39:40,460 | INFO     | 
[2026-03-07 19:40:30] 2026-03-07 18:39:40,466 | INFO     | architecture information:
[2026-03-07 19:40:30] 2026-03-07 18:39:40,467 | INFO     | executing command: cat /etc/os-release
[2026-03-07 19:40:30] 2026-03-07 18:39:40,481 | INFO     | cat /etc/os-release:
[2026-03-07 19:40:30] NAME="CentOS Linux"
[2026-03-07 19:40:30] VERSION="7 (Core)"
[2026-03-07 19:40:30] ID="centos"
[2026-03-07 19:40:30] ID_LIKE="rhel fedora"
[2026-03-07 19:40:30] VERSION_ID="7"
[2026-03-07 19:40:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 19:40:30] ANSI_COLOR="0;31"
[2026-03-07 19:40:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 19:40:30] HOME_URL="https://www.centos.org/"
[2026-03-07 19:40:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 19:40:30] 
[2026-03-07 19:40:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 19:40:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 19:40:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 19:40:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 19:40:30] 
[2026-03-07 19:40:30] 2026-03-07 18:39:40,482 | INFO     | **************************************
[2026-03-07 19:40:30] 2026-03-07 18:39:40,984 | INFO     | executing command: df -mP /var/lib/boinc/var/slot212/slots/0
[2026-03-07 19:40:30] 2026-03-07 18:39:41,000 | INFO     | sufficient remaining disk space (21231566848 B)
[2026-03-07 19:40:30] 2026-03-07 18:39:41,000 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 19:40:30] 2026-03-07 18:39:41,000 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 19:40:30] 2026-03-07 18:39:41,000 | INFO     | update_server=False
[2026-03-07 19:40:30] 2026-03-07 18:39:41,000 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 19:40:30] 2026-03-07 18:39:41,000 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 19:40:30] 2026-03-07 18:39:41,001 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 19:40:30] 2026-03-07 18:39:41,001 | INFO     | will abort loop
[2026-03-07 19:40:30] 2026-03-07 18:39:41,037 | INFO     | all payload control threads have been joined
[2026-03-07 19:40:30] 2026-03-07 18:39:41,216 | INFO     | all job control threads have been joined
[2026-03-07 19:40:30] 2026-03-07 18:39:41,649 | INFO     | all data control threads have been joined
[2026-03-07 19:40:30] 2026-03-07 18:39:41,855 | INFO     | job.realtimelogging is not enabled
[2026-03-07 19:40:30] 2026-03-07 18:39:42,005 | INFO     | [job] retrieve thread has finished
[2026-03-07 19:40:30] 2026-03-07 18:39:42,006 | INFO     | [job] job monitor thread has finished
[2026-03-07 19:40:30] 2026-03-07 18:39:42,043 | INFO     | [payload] control thread has finished
[2026-03-07 19:40:30] 2026-03-07 18:39:42,221 | INFO     | [job] control thread has finished
[2026-03-07 19:40:30] 2026-03-07 18:39:42,410 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 19:40:30] 2026-03-07 18:39:42,654 | INFO     | [data] control thread has finished
[2026-03-07 19:40:30] 2026-03-07 18:39:42,746 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 19:40:30] 2026-03-07 18:39:42,807 | INFO     | [payload] failed_post thread has finished
[2026-03-07 19:40:30] 2026-03-07 18:39:42,861 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 19:40:30] 2026-03-07 18:39:42,979 | INFO     | [job] validate thread has finished
[2026-03-07 19:40:30] 2026-03-07 18:39:43,006 | INFO     | [data] copytool_out thread has finished
[2026-03-07 19:40:30] 2026-03-07 18:39:43,231 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 19:40:30] 2026-03-07 18:39:43,260 | INFO     | [payload] validate_post thread has finished
[2026-03-07 19:40:30] 2026-03-07 18:39:43,342 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 19:40:30] 2026-03-07 18:39:43,387 | INFO     | [data] copytool_in thread has finished
[2026-03-07 19:40:30] 2026-03-07 18:39:43,595 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 19:40:30] 2026-03-07 18:39:44,347 | INFO     | [job] queue monitor thread has finished
[2026-03-07 19:40:30] 2026-03-07 18:39:47,602 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 19:40:30] 2026-03-07 18:40:11,573 | INFO     | PID=2895645 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 19:40:30] 2026-03-07 18:40:11,573 | INFO     | .. there are 58 such processes running
[2026-03-07 19:40:30] 2026-03-07 18:40:11,573 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 19:40:30] 2026-03-07 18:40:11,573 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 19:40:30] 2026-03-07 18:40:11,573 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 19:40:30] 2026-03-07 18:40:25,201 | INFO     | [monitor] cgroup control has ended
[2026-03-07 19:40:30] 2026-03-07 18:40:25,543 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22810798991168)>', '<ExcThread(monitor, started 22810555848448)>']
[2026-03-07 19:40:30] 2026-03-07 18:40:25,644 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 19:40:30] 2026-03-07 18:40:25,644 | INFO     | [monitor] control thread has ended
[2026-03-07 19:40:30] 2026-03-07 18:40:30,561 | INFO     | all workflow threads have been joined
[2026-03-07 19:40:30] 2026-03-07 18:40:30,562 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 19:40:30] 2026-03-07 18:40:30,562 | INFO     | traces error code: 0
[2026-03-07 19:40:30] 2026-03-07 18:40:30,562 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 19:40:30] 2026-03-07 18:40:30,690 [wrapper] ==== pilot stdout END ====
[2026-03-07 19:40:30] 2026-03-07 18:40:30,692 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 19:40:30] 2026-03-07 18:40:30,695 [wrapper] pilotpid: 2895645
[2026-03-07 19:40:30] 2026-03-07 18:40:30,697 [wrapper] Pilot exit status: 0
[2026-03-07 19:40:30] 2026-03-07 18:40:30,705 [wrapper] pandaids: 7043172394
[2026-03-07 19:40:30] 2026-03-07 18:40:30,821 [wrapper] cleanup supervisor_pilot 3946441 2895646
[2026-03-07 19:40:30] 2026-03-07 18:40:30,828 [wrapper] Test setup, not cleaning
[2026-03-07 19:40:30] 2026-03-07 18:40:30,830 [wrapper] apfmon messages muted
[2026-03-07 19:40:30] 2026-03-07 18:40:30,831 [wrapper] ==== wrapper stdout END ====
[2026-03-07 19:40:30] 2026-03-07 18:40:30,833 [wrapper] ==== wrapper stderr END ====
[2026-03-07 19:40:30]  *** Error codes and diagnostics ***
[2026-03-07 19:40:30]     "exeErrorCode": 0,
[2026-03-07 19:40:30]     "exeErrorDiag": "",
[2026-03-07 19:40:30]     "pilotErrorCode": 0,
[2026-03-07 19:40:30]     "pilotErrorDiag": "",
[2026-03-07 19:40:30]  *** Listing of results directory ***
[2026-03-07 19:40:30] total 404208
[2026-03-07 19:40:30] -rw-r--r--. 1 boinc boinc    584627 Mar  6 14:23 pilot3.tar.gz
[2026-03-07 19:40:30] -rwx------. 1 boinc boinc     36322 Mar  6 14:26 runpilot2-wrapper.sh
[2026-03-07 19:40:30] -rw-r--r--. 1 boinc boinc      5111 Mar  6 14:26 queuedata.json
[2026-03-07 19:40:30] -rw-r--r--. 1 boinc boinc       100 Mar  7 17:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 19:40:30] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 17:52 run_atlas
[2026-03-07 19:40:30] -rw-r--r--. 1 boinc boinc       105 Mar  7 17:52 job.xml
[2026-03-07 19:40:30] -rw-r--r--. 1 boinc boinc      6708 Mar  7 17:52 init_data.xml
[2026-03-07 19:40:30] -rw-r--r--. 2 boinc boinc 208981252 Mar  7 17:52 EVNT.48966985._000429.pool.root.1
[2026-03-07 19:40:30] -rw-r--r--. 2 boinc boinc     15845 Mar  7 17:52 start_atlas.sh
[2026-03-07 19:40:30] drwxrwx--x. 2 boinc boinc      4096 Mar  7 17:52 shared
[2026-03-07 19:40:30] -rw-r--r--. 2 boinc boinc    597975 Mar  7 17:52 input.tar.gz
[2026-03-07 19:40:30] -rw-r--r--. 1 boinc boinc         0 Mar  7 17:52 boinc_lockfile
[2026-03-07 19:40:30] -rw-r--r--. 1 boinc boinc      2590 Mar  7 17:52 pandaJob.out
[2026-03-07 19:40:30] -rw-------. 1 boinc boinc    999185 Mar  7 17:52 agis_schedconf.cvmfs.json
[2026-03-07 19:40:30] -rw-------. 1 boinc boinc   1521291 Mar  7 17:52 agis_ddmendpoints.agis.ALL.json
[2026-03-07 19:40:30] -rw-------. 1 boinc boinc       444 Mar  7 17:53 workernode_map.json
[2026-03-07 19:40:30] drwx------. 5 boinc boinc      4096 Mar  7 17:53 pilot3
[2026-03-07 19:40:30] -rw-------. 1 boinc boinc 198533577 Mar  7 19:39 HITS.48966988._008232.pool.root.1
[2026-03-07 19:40:30] -rw-r--r--. 1 boinc boinc       529 Mar  7 19:39 boinc_task_state.xml
[2026-03-07 19:40:30] -rw-------. 1 boinc boinc      1032 Mar  7 19:39 memory_monitor_summary.json
[2026-03-07 19:40:30] -rw-------. 1 boinc boinc        95 Mar  7 19:39 pilot_heartbeat.json
[2026-03-07 19:40:30] -rw-------. 1 boinc boinc    306951 Mar  7 19:39 log.48966988._008232.job.log.tgz.1
[2026-03-07 19:40:30] -rw-------. 1 boinc boinc      6353 Mar  7 19:39 heartbeat.json
[2026-03-07 19:40:30] -rw-r--r--. 1 boinc boinc      8192 Mar  7 19:40 boinc_mmap_file
[2026-03-07 19:40:30] -rw-r--r--. 1 boinc boinc        27 Mar  7 19:40 wrapper_checkpoint.txt
[2026-03-07 19:40:30] -rw-------. 1 boinc boinc      4904 Mar  7 19:40 pilotlog.txt
[2026-03-07 19:40:30] -rw-------. 1 boinc boinc    919885 Mar  7 19:40 log.48966988._008232.job.log.1
[2026-03-07 19:40:30] -rw-------. 1 boinc boinc       357 Mar  7 19:40 output.list
[2026-03-07 19:40:30] -rw-r--r--. 1 boinc boinc       620 Mar  7 19:40 runtime_log
[2026-03-07 19:40:30] -rw-------. 1 boinc boinc   1249280 Mar  7 19:40 result.tar.gz
[2026-03-07 19:40:30] -rw-r--r--. 1 boinc boinc      9221 Mar  7 19:40 runtime_log.err
[2026-03-07 19:40:30] -rw-------. 1 boinc boinc       662 Mar  7 19:40 lfjNDm7MkI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmmGSLDmbCk0Ln.diag
[2026-03-07 19:40:30] -rw-r--r--. 1 boinc boinc     21327 Mar  7 19:40 stderr.txt
[2026-03-07 19:40:30] HITS file was successfully produced:
[2026-03-07 19:40:30] -rw-------. 1 boinc boinc 198533577 Mar  7 19:39 shared/HITS.pool.root.1
[2026-03-07 19:40:30]  *** Contents of shared directory: ***
[2026-03-07 19:40:30] total 399796
[2026-03-07 19:40:30] -rw-r--r--. 2 boinc boinc 208981252 Mar  7 17:52 ATLAS.root_0
[2026-03-07 19:40:30] -rw-r--r--. 2 boinc boinc     15845 Mar  7 17:52 start_atlas.sh
[2026-03-07 19:40:30] -rw-r--r--. 2 boinc boinc    597975 Mar  7 17:52 input.tar.gz
[2026-03-07 19:40:30] -rw-------. 1 boinc boinc 198533577 Mar  7 19:39 HITS.pool.root.1
[2026-03-07 19:40:30] -rw-------. 1 boinc boinc   1249280 Mar  7 19:40 result.tar.gz
19:40:32 (2885603): run_atlas exited; CPU time 24165.418461
19:40:32 (2885603): called boinc_finish(0)

</stderr_txt>
]]>

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