Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:28:29 (1058840): wrapper (7.7.26015): starting
09:28:29 (1058840): wrapper: running run_atlas (--nthreads 12)
[2026-03-06 09:28:29] Arguments: --nthreads 12
[2026-03-06 09:28:29] Threads: 12
[2026-03-06 09:28:29] Checking for CVMFS
[2026-03-06 09:28:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 09:28:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 09:28:29] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 09:28:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 09:28:30] 2.11.5.0 2492782 137490 257288 156965 1 441 34100337 45568001 16358 130560 0 1209164611 99.821 648986147 19163 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-06 09:28:30] CVMFS is ok
[2026-03-06 09:28:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 09:28:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 09:28:30] Further information can be found at the LHC@home message board.
[2026-03-06 09:28:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 09:28:30] Checking for apptainer binary...
[2026-03-06 09:28:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-06 09:28:30] Running /usr/bin/apptainer --version
[2026-03-06 09:28:30] apptainer version 1.4.1-1.el9
[2026-03-06 09:28:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 09:28:30] wns0092.triumf.lcg
[2026-03-06 09:28:30] apptainer works
[2026-03-06 09:28:30] Set ATHENA_PROC_NUMBER=12
[2026-03-06 09:28:30] Set ATHENA_CORE_NUMBER=12
[2026-03-06 09:28:30] Starting ATLAS job with PandaID=7043315889
[2026-03-06 09:28:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 09:31:53]  *** The last 200 lines of the pilot log: ***
[2026-03-06 09:31:53] 2026-03-06 17:31:19,920 | INFO     | could have reported an average CPU frequency of 2665 MHz (4 samples)
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | ..............................
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . Timing measurements:
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . get job = 0 s
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . initial setup = 7 s
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . payload setup = 5 s
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . stage-in = 0 s
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . payload execution = 17 s
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . stage-out = 0 s
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . log creation = 0 s
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | ..............................
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043315889/pilotlog.txt
[2026-03-06 09:31:53] 2026-03-06 17:31:19,933 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-06 09:31:53] - Log from pilotlog.txt -
[2026-03-06 09:31:53] 2026-03-06 17:31:19,916 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 09:31:53] 2026-03-06 17:31:19,919 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 09:31:53] 2026-03-06 17:31:19,920 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 09:31:53] 2026-03-06 17:31:19,920 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 09:31:53] 2026-03-06 17:31:19,920 | WARNING  | found no stored workdir sizes
[2026-03-06 09:31:53] 2026-03-06 17:31:19,920 | INFO     | will not add max space = 0 B to job metrics
[2026-03-06 09:31:53] 2026-03-06 17:31:19,920 | WARNING  | wrong length of table data, x=[1772818147.0], y=[2571.0] (must be same and length>=4)
[2026-03-06 09:31:53] 2026-03-06 17:31:19,920 | INFO     | could have reported an average CPU frequency of 2665 MHz (4 samples)
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | ..............................
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . Timing measurements:
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . get job = 0 s
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . initial setup = 7 s
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . payload setup = 5 s
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . stage-in = 0 s
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . payload execution = 17 s
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . stage-out = 0 s
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . log creation = 0 s
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | ..............................
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043315889/pilotlog.txt
[2026-03-06 09:31:53] 2026-03-06 17:31:19,934 | WARNING  | 
[2026-03-06 09:31:53] [begin log extracts]
[2026-03-06 09:31:53] - Log from pilotlog.txt -
[2026-03-06 09:31:53] 2026-03-06 17:31:19,916 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 09:31:53] 2026-03-06 17:31:19,919 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 09:31:53] 2026-03-06 17:31:19,920 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 09:31:53] 2026-03-06 17:31:19,920 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 09:31:53] 2026-03-06 17:31:19,920 | WARNING  | found no stored workdir sizes
[2026-03-06 09:31:53] 2026-03-06 17:31:19,920 | INFO     | will not add max space = 0 B to job metrics
[2026-03-06 09:31:53] 2026-03-06 17:31:19,920 | WARNING  | wrong length of table data, x=[1772818147.0], y=[2571.0] (must be same and length>=4)
[2026-03-06 09:31:53] 2026-03-06 17:31:19,920 | INFO     | could have reported an average CPU frequency of 2665 MHz (4 samples)
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | ..............................
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . Timing measurements:
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . get job = 0 s
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . initial setup = 7 s
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . payload setup = 5 s
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . stage-in = 0 s
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . payload execution = 17 s
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . stage-out = 0 s
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | . log creation = 0 s
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | ..............................
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 09:31:53] 2026-03-06 17:31:19,921 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043315889/pilotlog.txt
[2026-03-06 09:31:53] [end log extracts]
[2026-03-06 09:31:53] 2026-03-06 17:31:19,934 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-06 09:31:53] 2026-03-06 17:31:19,935 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-06 09:31:53] 2026-03-06 17:31:20,334 | INFO     | 
[2026-03-06 09:31:53] 2026-03-06 17:31:20,334 | INFO     | job summary report
[2026-03-06 09:31:53] 2026-03-06 17:31:20,334 | INFO     | --------------------------------------------------
[2026-03-06 09:31:53] 2026-03-06 17:31:20,334 | INFO     | PanDA job id: 7043315889
[2026-03-06 09:31:53] 2026-03-06 17:31:20,334 | INFO     | task id: 48967030
[2026-03-06 09:31:53] 2026-03-06 17:31:20,334 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-06 09:29:15,381 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-06 09:31:53] 2026-03-06 17:31:20,334 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 09:31:53] 2026-03-06 17:31:20,334 | INFO     | pilot state: failed 
[2026-03-06 09:31:53] 2026-03-06 17:31:20,334 | INFO     | transexitcode: 65
[2026-03-06 09:31:53] 2026-03-06 17:31:20,335 | INFO     | exeerrorcode: 65
[2026-03-06 09:31:53] 2026-03-06 17:31:20,335 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-06 09:31:53] 2026-03-06 17:31:20,335 | INFO     | exitcode: 65
[2026-03-06 09:31:53] 2026-03-06 17:31:20,335 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-06 09:31:53] 2026-03-06 17:31:20,335 | INFO     | cpuconsumptiontime: 13 s
[2026-03-06 09:31:53] 2026-03-06 17:31:20,335 | INFO     | nevents: 0
[2026-03-06 09:31:53] 2026-03-06 17:31:20,335 | INFO     | neventsw: 0
[2026-03-06 09:31:53] 2026-03-06 17:31:20,335 | INFO     | pid: 1066991
[2026-03-06 09:31:53] 2026-03-06 17:31:20,335 | INFO     | pgrp: 1066991
[2026-03-06 09:31:53] 2026-03-06 17:31:20,335 | INFO     | corecount: 12
[2026-03-06 09:31:53] 2026-03-06 17:31:20,335 | INFO     | event service: False
[2026-03-06 09:31:53] 2026-03-06 17:31:20,335 | INFO     | sizes: {0: 2295381, 1: 2295842, 11: 2295842, 26: 2319202, 28: 2323522, 144: 2323660}
[2026-03-06 09:31:53] 2026-03-06 17:31:20,335 | INFO     | --------------------------------------------------
[2026-03-06 09:31:53] 2026-03-06 17:31:20,335 | INFO     | 
[2026-03-06 09:31:53] 2026-03-06 17:31:20,335 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-06 09:31:53] 2026-03-06 17:31:20,350 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 09:31:53] 2026-03-06 17:31:20,351 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 09:31:53] 2026-03-06 17:31:20,351 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 09:31:53] 2026-03-06 17:31:20,351 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 09:31:53] 2026-03-06 17:31:20,351 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 09:31:53] 2026-03-06 17:31:20,351 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 09:31:53] 2026-03-06 17:31:20,351 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 09:31:53] 2026-03-06 17:31:20,351 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 09:31:53] 2026-03-06 17:31:20,351 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 09:31:53] 2026-03-06 17:31:20,351 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 09:31:53] 2026-03-06 17:31:20,351 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 09:31:53] 2026-03-06 17:31:20,351 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 09:31:53] 2026-03-06 17:31:20,351 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 09:31:53] 2026-03-06 17:31:20,351 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 09:31:53] 2026-03-06 17:31:20,351 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 09:31:53] 2026-03-06 17:31:20,351 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 09:31:53] 2026-03-06 17:31:20,351 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 09:31:53] 2026-03-06 17:31:20,352 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 09:31:53] 2026-03-06 17:31:20,352 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 09:31:53] 2026-03-06 17:31:20,352 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 09:31:53] 2026-03-06 17:31:20,352 | INFO     | job 7043315889 has completed (purged errors)
[2026-03-06 09:31:53] 2026-03-06 17:31:20,352 | INFO     | overall cleanup function is called
[2026-03-06 09:31:53] 2026-03-06 17:31:20,978 | INFO     | PID=1062496 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 09:31:53] 2026-03-06 17:31:20,978 | INFO     | .. there are 28 such processes running
[2026-03-06 09:31:53] 2026-03-06 17:31:21,358 | INFO     | --- collectZombieJob: --- 10, [1066991]
[2026-03-06 09:31:53] 2026-03-06 17:31:21,358 | INFO     | zombie collector waiting for pid 1066991
[2026-03-06 09:31:53] 2026-03-06 17:31:21,358 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 09:31:53] 2026-03-06 17:31:21,358 | INFO     | collected zombie processes
[2026-03-06 09:31:53] 2026-03-06 17:31:21,358 | INFO     | will attempt to kill all subprocesses of pid=1066991
[2026-03-06 09:31:53] 2026-03-06 17:31:21,541 | INFO     | process IDs to be killed: [1066991] (in reverse order)
[2026-03-06 09:31:53] 2026-03-06 17:31:21,620 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 09:31:53] 2026-03-06 17:31:21,620 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 09:31:53] 2026-03-06 17:31:21,627 | INFO     | did not find any defunct processes belonging to 1066991
[2026-03-06 09:31:53] 2026-03-06 17:31:21,634 | INFO     | did not find any defunct processes belonging to 1066991
[2026-03-06 09:31:53] 2026-03-06 17:31:21,634 | INFO     | ready for new job
[2026-03-06 09:31:53] 2026-03-06 17:31:21,634 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 09:31:53] 2026-03-06 17:31:21,635 | INFO     | **************************************
[2026-03-06 09:31:53] 2026-03-06 17:31:21,636 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 09:31:53] 2026-03-06 17:31:21,636 | INFO     | **************************************
[2026-03-06 09:31:53] 2026-03-06 17:31:21,636 | INFO     | 
[2026-03-06 09:31:53] 2026-03-06 17:31:21,637 | INFO     | architecture information:
[2026-03-06 09:31:53] 2026-03-06 17:31:21,638 | INFO     | executing command: cat /etc/os-release
[2026-03-06 09:31:53] 2026-03-06 17:31:21,649 | INFO     | cat /etc/os-release:
[2026-03-06 09:31:53] NAME="CentOS Linux"
[2026-03-06 09:31:53] VERSION="7 (Core)"
[2026-03-06 09:31:53] ID="centos"
[2026-03-06 09:31:53] ID_LIKE="rhel fedora"
[2026-03-06 09:31:53] VERSION_ID="7"
[2026-03-06 09:31:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 09:31:53] ANSI_COLOR="0;31"
[2026-03-06 09:31:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 09:31:53] HOME_URL="https://www.centos.org/"
[2026-03-06 09:31:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 09:31:53] 
[2026-03-06 09:31:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 09:31:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 09:31:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 09:31:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 09:31:53] 
[2026-03-06 09:31:53] 2026-03-06 17:31:21,649 | INFO     | **************************************
[2026-03-06 09:31:53] 2026-03-06 17:31:22,153 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-06 09:31:53] 2026-03-06 17:31:22,165 | INFO     | sufficient remaining disk space (2003196444672 B)
[2026-03-06 09:31:53] 2026-03-06 17:31:22,165 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 09:31:53] 2026-03-06 17:31:22,165 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 09:31:53] 2026-03-06 17:31:22,165 | INFO     | update_server=False
[2026-03-06 09:31:53] 2026-03-06 17:31:22,165 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 09:31:53] 2026-03-06 17:31:22,257 | INFO     | all payload control threads have been joined
[2026-03-06 09:31:53] 2026-03-06 17:31:22,381 | INFO     | all data control threads have been joined
[2026-03-06 09:31:53] 2026-03-06 17:31:22,389 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 09:31:53] 2026-03-06 17:31:22,567 | INFO     | all job control threads have been joined
[2026-03-06 09:31:53] 2026-03-06 17:31:22,630 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-06 09:31:53] 2026-03-06 17:31:22,630 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-06 09:31:53] 2026-03-06 17:31:22,630 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 09:31:53] 2026-03-06 17:31:22,630 | INFO     | will abort loop
[2026-03-06 09:31:53] 2026-03-06 17:31:22,895 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 09:31:53] 2026-03-06 17:31:23,172 | INFO     | [job] retrieve thread has finished
[2026-03-06 09:31:53] 2026-03-06 17:31:23,246 | INFO     | [data] copytool_in thread has finished
[2026-03-06 09:31:53] 2026-03-06 17:31:23,262 | INFO     | [payload] control thread has finished
[2026-03-06 09:31:53] 2026-03-06 17:31:23,386 | INFO     | [data] control thread has finished
[2026-03-06 09:31:53] 2026-03-06 17:31:23,572 | INFO     | [job] control thread has finished
[2026-03-06 09:31:53] 2026-03-06 17:31:23,604 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 09:31:53] 2026-03-06 17:31:23,636 | INFO     | [job] job monitor thread has finished
[2026-03-06 09:31:53] 2026-03-06 17:31:23,804 | INFO     | [payload] failed_post thread has finished
[2026-03-06 09:31:53] 2026-03-06 17:31:24,126 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 09:31:53] 2026-03-06 17:31:24,309 | INFO     | [job] validate thread has finished
[2026-03-06 09:31:53] 2026-03-06 17:31:24,394 | INFO     | [data] copytool_out thread has finished
[2026-03-06 09:31:53] 2026-03-06 17:31:24,444 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 09:31:53] 2026-03-06 17:31:24,583 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 09:31:53] 2026-03-06 17:31:24,668 | INFO     | [payload] validate_post thread has finished
[2026-03-06 09:31:53] 2026-03-06 17:31:25,002 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 09:31:53] 2026-03-06 17:31:26,007 | INFO     | [job] queue monitor thread has finished
[2026-03-06 09:31:53] 2026-03-06 17:31:26,901 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 09:31:53] 2026-03-06 17:31:45,030 | INFO     | [monitor] cgroup control has ended
[2026-03-06 09:31:53] 2026-03-06 17:31:46,615 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139747520792384)>', '<ExcThread(monitor, started 139747112490752)>']
[2026-03-06 09:31:53] 2026-03-06 17:31:51,640 | INFO     | all workflow threads have been joined
[2026-03-06 09:31:53] 2026-03-06 17:31:51,640 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 09:31:53] 2026-03-06 17:31:51,640 | INFO     | traces error code: 0
[2026-03-06 09:31:53] 2026-03-06 17:31:51,641 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 09:31:53] 2026-03-06 17:31:53,266 | INFO     | PID=1062496 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 09:31:53] 2026-03-06 17:31:53,267 | INFO     | .. there are 28 such processes running
[2026-03-06 09:31:53] 2026-03-06 17:31:53,267 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 09:31:53] 2026-03-06 17:31:53,267 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 09:31:53] 2026-03-06 17:31:53,267 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 09:31:53] 2026-03-06 17:31:53,267 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 09:31:53] 2026-03-06 17:31:53,267 | INFO     | [monitor] control thread has ended
[2026-03-06 09:31:53] 2026-03-06 17:31:53,373 [wrapper] ==== pilot stdout END ====
[2026-03-06 09:31:53] 2026-03-06 17:31:53,375 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 09:31:53] 2026-03-06 17:31:53,376 [wrapper] pilotpid: 1062496
[2026-03-06 09:31:53] 2026-03-06 17:31:53,379 [wrapper] Pilot exit status: 0
[2026-03-06 09:31:53] 2026-03-06 17:31:53,387 [wrapper] pandaids: 7043315889
[2026-03-06 09:31:53] 2026-03-06 17:31:53,427 [wrapper] cleanup supervisor_pilot 1062502 1062497
[2026-03-06 09:31:53] 2026-03-06 17:31:53,430 [wrapper] Test setup, not cleaning
[2026-03-06 09:31:53] 2026-03-06 17:31:53,432 [wrapper] apfmon messages muted
[2026-03-06 09:31:53] 2026-03-06 17:31:53,434 [wrapper] ==== wrapper stdout END ====
[2026-03-06 09:31:53] 2026-03-06 17:31:53,436 [wrapper] ==== wrapper stderr END ====
[2026-03-06 09:31:53]  *** Error codes and diagnostics ***
[2026-03-06 09:31:53]     "exeErrorCode": 65,
[2026-03-06 09:31:53]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-06 09:31:53]     "pilotErrorCode": 1305,
[2026-03-06 09:31:53]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-06 09:31:53]  *** Listing of results directory ***
[2026-03-06 09:31:53] total 212944
[2026-03-06 09:31:53] -rw-r--r--. 1 boinc boinc    584627 Mar  6 06:31 pilot3.tar.gz
[2026-03-06 09:31:53] -rwx------. 1 boinc boinc     36322 Mar  6 07:02 runpilot2-wrapper.sh
[2026-03-06 09:31:53] -rw-r--r--. 1 boinc boinc      5111 Mar  6 07:02 queuedata.json
[2026-03-06 09:31:53] -rw-r--r--. 1 boinc boinc       100 Mar  6 09:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 09:31:53] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 09:28 run_atlas
[2026-03-06 09:31:53] -rw-r--r--. 1 boinc boinc       105 Mar  6 09:28 job.xml
[2026-03-06 09:31:53] -rw-r--r--. 1 boinc boinc      6594 Mar  6 09:28 init_data.xml
[2026-03-06 09:31:53] -rw-r--r--. 2 boinc boinc 213917013 Mar  6 09:28 EVNT.48967027._000048.pool.root.1
[2026-03-06 09:31:53] -rw-r--r--. 2 boinc boinc     15845 Mar  6 09:28 start_atlas.sh
[2026-03-06 09:31:53] drwxrwx--x. 2 boinc boinc      4096 Mar  6 09:28 shared
[2026-03-06 09:31:53] -rw-r--r--. 2 boinc boinc    597945 Mar  6 09:28 input.tar.gz
[2026-03-06 09:31:53] -rw-r--r--. 1 boinc boinc         0 Mar  6 09:28 boinc_lockfile
[2026-03-06 09:31:53] -rw-r--r--. 1 boinc boinc      2566 Mar  6 09:28 pandaJob.out
[2026-03-06 09:31:53] -rw-------. 1 boinc boinc    999496 Mar  6 09:28 agis_schedconf.cvmfs.json
[2026-03-06 09:31:53] -rw-------. 1 boinc boinc   1521291 Mar  6 09:28 agis_ddmendpoints.agis.ALL.json
[2026-03-06 09:31:53] -rw-------. 1 boinc boinc       444 Mar  6 09:28 workernode_map.json
[2026-03-06 09:31:53] drwx------. 5 boinc boinc      4096 Mar  6 09:28 pilot3
[2026-03-06 09:31:53] -rw-r--r--. 1 boinc boinc       522 Mar  6 09:29 boinc_task_state.xml
[2026-03-06 09:31:53] -rw-------. 1 boinc boinc       990 Mar  6 09:29 memory_monitor_summary.json
[2026-03-06 09:31:53] -rw-------. 1 boinc boinc     20693 Mar  6 09:29 log.48967030._001561.job.log.tgz.1
[2026-03-06 09:31:53] -rw-------. 1 boinc boinc      7046 Mar  6 09:31 heartbeat.json
[2026-03-06 09:31:53] -rw-r--r--. 1 boinc boinc        22 Mar  6 09:31 wrapper_checkpoint.txt
[2026-03-06 09:31:53] -rw-r--r--. 1 boinc boinc      8192 Mar  6 09:31 boinc_mmap_file
[2026-03-06 09:31:53] -rw-------. 1 boinc boinc       823 Mar  6 09:31 pilotlog.txt
[2026-03-06 09:31:53] -rw-------. 1 boinc boinc        95 Mar  6 09:31 pilot_heartbeat.json
[2026-03-06 09:31:53] -rw-------. 1 boinc boinc     80533 Mar  6 09:31 log.48967030._001561.job.log.1
[2026-03-06 09:31:53] -rw-------. 1 boinc boinc       188 Mar  6 09:31 output.list
[2026-03-06 09:31:53] -rw-r--r--. 1 boinc boinc       620 Mar  6 09:31 runtime_log
[2026-03-06 09:31:53] -rw-------. 1 boinc boinc    122880 Mar  6 09:31 result.tar.gz
[2026-03-06 09:31:53] -rw-r--r--. 1 boinc boinc      8635 Mar  6 09:31 runtime_log.err
[2026-03-06 09:31:53] -rw-------. 1 boinc boinc       645 Mar  6 09:31 ENEMDmislI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmDIQLDmHq0Vgm.diag
[2026-03-06 09:31:53] -rw-r--r--. 1 boinc boinc     21736 Mar  6 09:31 stderr.txt
[2026-03-06 09:31:53] No HITS result produced
[2026-03-06 09:31:53]  *** Contents of shared directory: ***
[2026-03-06 09:31:53] total 209628
[2026-03-06 09:31:53] -rw-r--r--. 2 boinc boinc 213917013 Mar  6 09:28 ATLAS.root_0
[2026-03-06 09:31:53] -rw-r--r--. 2 boinc boinc     15845 Mar  6 09:28 start_atlas.sh
[2026-03-06 09:31:53] -rw-r--r--. 2 boinc boinc    597945 Mar  6 09:28 input.tar.gz
[2026-03-06 09:31:53] -rw-------. 1 boinc boinc    122880 Mar  6 09:31 result.tar.gz
09:31:54 (1058840): run_atlas exited; CPU time 16.681636
09:31:54 (1058840): called boinc_finish(0)

</stderr_txt>
]]>

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