Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:37:38 (943818): wrapper (7.7.26015): starting
15:37:38 (943818): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 15:37:38] Arguments: --nthreads 4
[2026-03-07 15:37:38] Threads: 4
[2026-03-07 15:37:38] Checking for CVMFS
[2026-03-07 15:37:38] No cvmfs_config command found, will try listing directly
[2026-03-07 15:37:38] CVMFS is ok
[2026-03-07 15:37:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 15:37:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 15:37:38] Further information can be found at the LHC@home message board.
[2026-03-07 15:37:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 15:37:38] Checking for apptainer binary...
[2026-03-07 15:37:38] which: no apptainer in ((null))
[2026-03-07 15:37:38] apptainer is not installed, using version from CVMFS
[2026-03-07 15:37:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 15:37:38] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot92/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-07 15:37:38] apptainer works
[2026-03-07 15:37:38] Set ATHENA_PROC_NUMBER=4
[2026-03-07 15:37:38] Set ATHENA_CORE_NUMBER=4
[2026-03-07 15:37:38] Starting ATLAS job with PandaID=7043122189
[2026-03-07 15:37:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot92/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 17:20:05]  *** The last 200 lines of the pilot log: ***
[2026-03-07 17:20:05] 2026-03-07 16:19:28,405 | INFO     | log transfer has been attempted: DONE
[2026-03-07 17:20:05] 2026-03-07 16:19:28,405 | INFO     | job 7043122189 has finished - writing final server update
[2026-03-07 17:20:05] 2026-03-07 16:19:28,406 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3086922/.job.ad'
[2026-03-07 17:20:05] 2026-03-07 16:19:28,406 | INFO     | total number of processed events: 400 (read)
[2026-03-07 17:20:05] 2026-03-07 16:19:28,423 | INFO     | using path: /var/lib/boinc/var/slot92/slots/1/PanDA_Pilot-7043122189/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 17:20:05] 2026-03-07 16:19:28,424 | INFO     | extracted standard info from prmon json
[2026-03-07 17:20:05] 2026-03-07 16:19:28,424 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 17:20:05] 2026-03-07 16:19:28,424 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 17:20:05] 2026-03-07 16:19:28,424 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 17:20:05] 2026-03-07 16:19:28,424 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 17:20:05] 2026-03-07 16:19:28,425 | INFO     | fitting pss+swap vs Time
[2026-03-07 17:20:05] 2026-03-07 16:19:28,425 | INFO     | sum of square deviations: 310052325.0
[2026-03-07 17:20:05] 2026-03-07 16:19:28,426 | INFO     | sum of deviations: 9716324305.000002
[2026-03-07 17:20:05] 2026-03-07 16:19:28,426 | INFO     | mean x: 1772897308.5
[2026-03-07 17:20:05] 2026-03-07 16:19:28,426 | INFO     | mean y: 2299263.46
[2026-03-07 17:20:05] 2026-03-07 16:19:28,426 | INFO     | intersect: -55556210768.185905
[2026-03-07 17:20:05] 2026-03-07 16:19:28,426 | INFO     | chi2: 1.1105811890351256
[2026-03-07 17:20:05] 2026-03-07 16:19:28,426 | INFO     | sum of square deviations: 265828240.0
[2026-03-07 17:20:05] 2026-03-07 16:19:28,426 | INFO     | sum of deviations: 9167212492.000004
[2026-03-07 17:20:05] 2026-03-07 16:19:28,426 | INFO     | mean x: 1772897156.0
[2026-03-07 17:20:05] 2026-03-07 16:19:28,426 | INFO     | mean y: 2297370.3789473684
[2026-03-07 17:20:05] 2026-03-07 16:19:28,426 | INFO     | intersect: -61136898959.98264
[2026-03-07 17:20:05] 2026-03-07 16:19:28,426 | INFO     | chi2: 1.1126354909159029
[2026-03-07 17:20:05] 2026-03-07 16:19:28,426 | INFO     | current chi2=1.1126354909159029 (change=-0.18497538955815065 %)
[2026-03-07 17:20:05] 2026-03-07 16:19:28,427 | INFO     | right removable region: 94
[2026-03-07 17:20:05] 2026-03-07 16:19:28,427 | INFO     | sum of square deviations: 265828240.0
[2026-03-07 17:20:05] 2026-03-07 16:19:28,427 | INFO     | sum of deviations: 258417410.99999997
[2026-03-07 17:20:05] 2026-03-07 16:19:28,427 | INFO     | mean x: 1772897461.0
[2026-03-07 17:20:05] 2026-03-07 16:19:28,427 | INFO     | mean y: 2330814.0210526315
[2026-03-07 17:20:05] 2026-03-07 16:19:28,427 | INFO     | intersect: -1721141349.2077053
[2026-03-07 17:20:05] 2026-03-07 16:19:28,427 | INFO     | chi2: 0.00017224546336175903
[2026-03-07 17:20:05] 2026-03-07 16:19:28,427 | INFO     | current chi2=0.00017224546336175903 (change=99.98449051135907 %)
[2026-03-07 17:20:05] 2026-03-07 16:19:28,427 | INFO     | sum of square deviations: 226022842.5
[2026-03-07 17:20:05] 2026-03-07 16:19:28,427 | INFO     | sum of deviations: 107101695.5
[2026-03-07 17:20:05] 2026-03-07 16:19:28,427 | INFO     | mean x: 1772897613.5
[2026-03-07 17:20:05] 2026-03-07 16:19:28,427 | INFO     | mean y: 2331385.811111111
[2026-03-07 17:20:05] 2026-03-07 16:19:28,428 | INFO     | intersect: -837762200.5429039
[2026-03-07 17:20:05] 2026-03-07 16:19:28,428 | INFO     | chi2: 7.876014758334914e-05
[2026-03-07 17:20:05] 2026-03-07 16:19:28,428 | INFO     | current chi2=7.876014758334914e-05 (change=54.27447199701688 %)
[2026-03-07 17:20:05] 2026-03-07 16:19:28,428 | INFO     | sum of square deviations: 190403570.0
[2026-03-07 17:20:05] 2026-03-07 16:19:28,428 | INFO     | sum of deviations: 93307552.0
[2026-03-07 17:20:05] 2026-03-07 16:19:28,428 | INFO     | mean x: 1772897766.0
[2026-03-07 17:20:05] 2026-03-07 16:19:28,428 | INFO     | mean y: 2331446.223529412
[2026-03-07 17:20:05] 2026-03-07 16:19:28,428 | INFO     | intersect: -866479734.6368338
[2026-03-07 17:20:05] 2026-03-07 16:19:28,428 | INFO     | chi2: 7.801213845379441e-05
[2026-03-07 17:20:05] 2026-03-07 16:19:28,428 | INFO     | current chi2=7.801213845379441e-05 (change=0.9497304823650129 %)
[2026-03-07 17:20:05] 2026-03-07 16:19:28,428 | INFO     | left removable region: 30
[2026-03-07 17:20:05] 2026-03-07 16:19:28,428 | INFO     | sum of square deviations: 81266640.0
[2026-03-07 17:20:05] 2026-03-07 16:19:28,428 | INFO     | sum of deviations: 56211896.5
[2026-03-07 17:20:05] 2026-03-07 16:19:28,428 | INFO     | mean x: 1772898040.5
[2026-03-07 17:20:05] 2026-03-07 16:19:28,428 | INFO     | mean y: 2331018.890625
[2026-03-07 17:20:05] 2026-03-07 16:19:28,428 | INFO     | intersect: -1223977355.0945528
[2026-03-07 17:20:05] 2026-03-07 16:19:28,429 | INFO     | chi2: 2.7726083784136155e-06
[2026-03-07 17:20:05] 2026-03-07 16:19:28,429 | INFO     | current memory leak: 0.69 B/s (using 64 data points, chi2=0.00)
[2026-03-07 17:20:05] 2026-03-07 16:19:28,429 | INFO     | could have reported an average CPU frequency of 3625 MHz (7 samples)
[2026-03-07 17:20:05] 2026-03-07 16:19:28,429 | INFO     | ..............................
[2026-03-07 17:20:05] 2026-03-07 16:19:28,429 | INFO     | . Timing measurements:
[2026-03-07 17:20:05] 2026-03-07 16:19:28,429 | INFO     | . get job = 0 s
[2026-03-07 17:20:05] 2026-03-07 16:19:28,429 | INFO     | . initial setup = 4 s
[2026-03-07 17:20:05] 2026-03-07 16:19:28,429 | INFO     | . payload setup = 4 s
[2026-03-07 17:20:05] 2026-03-07 16:19:28,429 | INFO     | . stage-in = 0 s
[2026-03-07 17:20:05] 2026-03-07 16:19:28,429 | INFO     | . payload execution = 6076 s
[2026-03-07 17:20:05] 2026-03-07 16:19:28,429 | INFO     | . stage-out = 0 s
[2026-03-07 17:20:05] 2026-03-07 16:19:28,429 | INFO     | . log creation = 0 s
[2026-03-07 17:20:05] 2026-03-07 16:19:28,429 | INFO     | ..............................
[2026-03-07 17:20:05] 2026-03-07 16:19:28,478 | INFO     | 
[2026-03-07 17:20:05] 2026-03-07 16:19:28,478 | INFO     | job summary report
[2026-03-07 17:20:05] 2026-03-07 16:19:28,478 | INFO     | --------------------------------------------------
[2026-03-07 17:20:05] 2026-03-07 16:19:28,478 | INFO     | PanDA job id: 7043122189
[2026-03-07 17:20:05] 2026-03-07 16:19:28,478 | INFO     | task id: 48966988
[2026-03-07 17:20:05] 2026-03-07 16:19:28,478 | INFO     | errors: (none)
[2026-03-07 17:20:05] 2026-03-07 16:19:28,478 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 17:20:05] 2026-03-07 16:19:28,478 | INFO     | pilot state: finished 
[2026-03-07 17:20:05] 2026-03-07 16:19:28,478 | INFO     | transexitcode: 0
[2026-03-07 17:20:05] 2026-03-07 16:19:28,478 | INFO     | exeerrorcode: 0
[2026-03-07 17:20:05] 2026-03-07 16:19:28,478 | INFO     | exeerrordiag: 
[2026-03-07 17:20:05] 2026-03-07 16:19:28,478 | INFO     | exitcode: 0
[2026-03-07 17:20:05] 2026-03-07 16:19:28,478 | INFO     | exitmsg: OK
[2026-03-07 17:20:05] 2026-03-07 16:19:28,478 | INFO     | cpuconsumptiontime: 23344 s
[2026-03-07 17:20:05] 2026-03-07 16:19:28,478 | INFO     | nevents: 400
[2026-03-07 17:20:05] 2026-03-07 16:19:28,479 | INFO     | neventsw: 0
[2026-03-07 17:20:05] 2026-03-07 16:19:28,479 | INFO     | pid: 960531
[2026-03-07 17:20:05] 2026-03-07 16:19:28,479 | INFO     | pgrp: 960531
[2026-03-07 17:20:05] 2026-03-07 16:19:28,479 | INFO     | corecount: 4
[2026-03-07 17:20:05] 2026-03-07 16:19:28,479 | INFO     | event service: False
[2026-03-07 17:20:05] 2026-03-07 16:19:28,479 | INFO     | sizes: {0: 2295591, 1: 2295853, 11: 2295881, 6085: 2322695, 6087: 2331715, 6088: 2332093}
[2026-03-07 17:20:05] 2026-03-07 16:19:28,479 | INFO     | --------------------------------------------------
[2026-03-07 17:20:05] 2026-03-07 16:19:28,479 | INFO     | 
[2026-03-07 17:20:05] 2026-03-07 16:19:28,479 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot92/slots/1
[2026-03-07 17:20:05] 2026-03-07 16:19:28,546 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 17:20:05] 2026-03-07 16:19:28,546 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 17:20:05] 2026-03-07 16:19:28,546 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 17:20:05] 2026-03-07 16:19:28,546 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 17:20:05] 2026-03-07 16:19:28,546 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 17:20:05] 2026-03-07 16:19:28,546 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 17:20:05] 2026-03-07 16:19:28,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 17:20:05] 2026-03-07 16:19:28,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 17:20:05] 2026-03-07 16:19:28,547 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 17:20:05] 2026-03-07 16:19:28,547 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 17:20:05] 2026-03-07 16:19:28,547 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 17:20:05] 2026-03-07 16:19:28,547 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 17:20:05] 2026-03-07 16:19:28,547 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 17:20:05] 2026-03-07 16:19:28,547 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 17:20:05] 2026-03-07 16:19:28,547 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 17:20:05] 2026-03-07 16:19:28,547 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 17:20:05] 2026-03-07 16:19:28,547 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 17:20:05] 2026-03-07 16:19:28,547 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 17:20:05] 2026-03-07 16:19:28,547 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 17:20:05] 2026-03-07 16:19:28,547 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 17:20:05] 2026-03-07 16:19:28,547 | INFO     | job 7043122189 has completed (purged errors)
[2026-03-07 17:20:05] 2026-03-07 16:19:28,547 | INFO     | overall cleanup function is called
[2026-03-07 17:20:05] 2026-03-07 16:19:29,553 | INFO     | --- collectZombieJob: --- 10, [960531]
[2026-03-07 17:20:05] 2026-03-07 16:19:29,553 | INFO     | zombie collector waiting for pid 960531
[2026-03-07 17:20:05] 2026-03-07 16:19:29,554 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 17:20:05] 2026-03-07 16:19:29,554 | INFO     | collected zombie processes
[2026-03-07 17:20:05] 2026-03-07 16:19:29,554 | INFO     | will attempt to kill all subprocesses of pid=960531
[2026-03-07 17:20:05] 2026-03-07 16:19:30,018 | INFO     | process IDs to be killed: [960531] (in reverse order)
[2026-03-07 17:20:05] 2026-03-07 16:19:30,246 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 17:20:05] 2026-03-07 16:19:30,246 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 17:20:05] 2026-03-07 16:19:30,274 | INFO     | did not find any defunct processes belonging to 960531
[2026-03-07 17:20:05] 2026-03-07 16:19:30,301 | INFO     | did not find any defunct processes belonging to 960531
[2026-03-07 17:20:05] 2026-03-07 16:19:30,301 | INFO     | ready for new job
[2026-03-07 17:20:05] 2026-03-07 16:19:30,301 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 17:20:05] 2026-03-07 16:19:30,302 | INFO     | **************************************
[2026-03-07 17:20:05] 2026-03-07 16:19:30,303 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 17:20:05] 2026-03-07 16:19:30,303 | INFO     | **************************************
[2026-03-07 17:20:05] 2026-03-07 16:19:30,303 | INFO     | 
[2026-03-07 17:20:05] 2026-03-07 16:19:30,309 | INFO     | architecture information:
[2026-03-07 17:20:05] 2026-03-07 16:19:30,309 | INFO     | executing command: cat /etc/os-release
[2026-03-07 17:20:05] 2026-03-07 16:19:30,324 | INFO     | cat /etc/os-release:
[2026-03-07 17:20:05] NAME="CentOS Linux"
[2026-03-07 17:20:05] VERSION="7 (Core)"
[2026-03-07 17:20:05] ID="centos"
[2026-03-07 17:20:05] ID_LIKE="rhel fedora"
[2026-03-07 17:20:05] VERSION_ID="7"
[2026-03-07 17:20:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 17:20:05] ANSI_COLOR="0;31"
[2026-03-07 17:20:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 17:20:05] HOME_URL="https://www.centos.org/"
[2026-03-07 17:20:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 17:20:05] 
[2026-03-07 17:20:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 17:20:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 17:20:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 17:20:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 17:20:05] 
[2026-03-07 17:20:05] 2026-03-07 16:19:30,324 | INFO     | **************************************
[2026-03-07 17:20:05] 2026-03-07 16:19:30,827 | INFO     | executing command: df -mP /var/lib/boinc/var/slot92/slots/1
[2026-03-07 17:20:05] 2026-03-07 16:19:30,851 | INFO     | sufficient remaining disk space (20086521856 B)
[2026-03-07 17:20:05] 2026-03-07 16:19:30,851 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 17:20:05] 2026-03-07 16:19:30,851 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 17:20:05] 2026-03-07 16:19:30,851 | INFO     | update_server=False
[2026-03-07 17:20:05] 2026-03-07 16:19:30,851 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 17:20:05] 2026-03-07 16:19:30,852 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 17:20:05] 2026-03-07 16:19:30,852 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 17:20:05] 2026-03-07 16:19:31,203 | INFO     | all job control threads have been joined
[2026-03-07 17:20:05] 2026-03-07 16:19:31,393 | INFO     | all data control threads have been joined
[2026-03-07 17:20:05] 2026-03-07 16:19:31,417 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 17:20:05] 2026-03-07 16:19:31,417 | INFO     | aborting loop
[2026-03-07 17:20:05] 2026-03-07 16:19:31,856 | INFO     | [job] retrieve thread has finished
[2026-03-07 17:20:05] 2026-03-07 16:19:32,125 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 17:20:05] 2026-03-07 16:19:32,199 | INFO     | [job] validate thread has finished
[2026-03-07 17:20:05] 2026-03-07 16:19:32,207 | INFO     | all payload control threads have been joined
[2026-03-07 17:20:05] 2026-03-07 16:19:32,209 | INFO     | [job] control thread has finished
[2026-03-07 17:20:05] 2026-03-07 16:19:32,234 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 17:20:05] 2026-03-07 16:19:32,398 | INFO     | [data] control thread has finished
[2026-03-07 17:20:05] 2026-03-07 16:19:32,423 | INFO     | [job] job monitor thread has finished
[2026-03-07 17:20:05] 2026-03-07 16:19:32,496 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 17:20:05] 2026-03-07 16:19:32,581 | INFO     | [payload] validate_post thread has finished
[2026-03-07 17:20:05] 2026-03-07 16:19:32,856 | INFO     | [data] copytool_out thread has finished
[2026-03-07 17:20:05] 2026-03-07 16:19:32,863 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 17:20:05] 2026-03-07 16:19:32,890 | INFO     | [payload] failed_post thread has finished
[2026-03-07 17:20:05] 2026-03-07 16:19:32,990 | INFO     | [data] copytool_in thread has finished
[2026-03-07 17:20:05] 2026-03-07 16:19:33,213 | INFO     | [payload] control thread has finished
[2026-03-07 17:20:05] 2026-03-07 16:19:33,492 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 17:20:05] 2026-03-07 16:19:34,498 | INFO     | [job] queue monitor thread has finished
[2026-03-07 17:20:05] 2026-03-07 16:19:34,861 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 17:20:05] 2026-03-07 16:19:59,053 | INFO     | [monitor] cgroup control has ended
[2026-03-07 17:20:05] 2026-03-07 16:20:00,403 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23023961499456)>', '<ExcThread(monitor, started 23023722968832)>']
[2026-03-07 17:20:05] 2026-03-07 16:20:00,869 | INFO     | PID=948530 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-07 17:20:05] 2026-03-07 16:20:00,869 | INFO     | .. there are 54 such processes running
[2026-03-07 17:20:05] 2026-03-07 16:20:00,870 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 17:20:05] 2026-03-07 16:20:00,870 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 17:20:05] 2026-03-07 16:20:00,870 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 17:20:05] 2026-03-07 16:20:00,870 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 17:20:05] 2026-03-07 16:20:00,870 | INFO     | [monitor] control thread has ended
[2026-03-07 17:20:05] 2026-03-07 16:20:05,432 | INFO     | all workflow threads have been joined
[2026-03-07 17:20:05] 2026-03-07 16:20:05,432 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 17:20:05] 2026-03-07 16:20:05,432 | INFO     | traces error code: 0
[2026-03-07 17:20:05] 2026-03-07 16:20:05,432 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 17:20:05] 2026-03-07 16:20:05,567 [wrapper] ==== pilot stdout END ====
[2026-03-07 17:20:05] 2026-03-07 16:20:05,570 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 17:20:05] 2026-03-07 16:20:05,573 [wrapper] pilotpid: 948530
[2026-03-07 17:20:05] 2026-03-07 16:20:05,575 [wrapper] Pilot exit status: 0
[2026-03-07 17:20:05] 2026-03-07 16:20:05,583 [wrapper] pandaids: 7043122189
[2026-03-07 17:20:05] 2026-03-07 16:20:05,696 [wrapper] cleanup supervisor_pilot 1980493 948531
[2026-03-07 17:20:05] 2026-03-07 16:20:05,698 [wrapper] Test setup, not cleaning
[2026-03-07 17:20:05] 2026-03-07 16:20:05,700 [wrapper] apfmon messages muted
[2026-03-07 17:20:05] 2026-03-07 16:20:05,703 [wrapper] ==== wrapper stdout END ====
[2026-03-07 17:20:05] 2026-03-07 16:20:05,704 [wrapper] ==== wrapper stderr END ====
[2026-03-07 17:20:05]  *** Error codes and diagnostics ***
[2026-03-07 17:20:05]     "exeErrorCode": 0,
[2026-03-07 17:20:05]     "exeErrorDiag": "",
[2026-03-07 17:20:05]     "pilotErrorCode": 0,
[2026-03-07 17:20:05]     "pilotErrorDiag": "",
[2026-03-07 17:20:05]  *** Listing of results directory ***
[2026-03-07 17:20:05] total 405420
[2026-03-07 17:20:05] -rw-r--r--. 1 boinc boinc    584627 Mar  6 12:48 pilot3.tar.gz
[2026-03-07 17:20:05] -rw-r--r--. 1 boinc boinc      5111 Mar  6 13:20 queuedata.json
[2026-03-07 17:20:05] -rwx------. 1 boinc boinc     36322 Mar  6 13:21 runpilot2-wrapper.sh
[2026-03-07 17:20:05] -rw-r--r--. 1 boinc boinc       100 Mar  7 15:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 17:20:05] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 15:37 run_atlas
[2026-03-07 17:20:05] -rw-r--r--. 1 boinc boinc       105 Mar  7 15:37 job.xml
[2026-03-07 17:20:05] -rw-r--r--. 1 boinc boinc      6707 Mar  7 15:37 init_data.xml
[2026-03-07 17:20:05] -rw-r--r--. 2 boinc boinc 211166452 Mar  7 15:37 EVNT.48966985._000391.pool.root.1
[2026-03-07 17:20:05] -rw-r--r--. 2 boinc boinc     15845 Mar  7 15:37 start_atlas.sh
[2026-03-07 17:20:05] drwxrwx--x. 2 boinc boinc      4096 Mar  7 15:37 shared
[2026-03-07 17:20:05] -rw-r--r--. 2 boinc boinc    597969 Mar  7 15:37 input.tar.gz
[2026-03-07 17:20:05] -rw-r--r--. 1 boinc boinc         0 Mar  7 15:37 boinc_lockfile
[2026-03-07 17:20:05] -rw-r--r--. 1 boinc boinc      2590 Mar  7 15:37 pandaJob.out
[2026-03-07 17:20:05] -rw-------. 1 boinc boinc    999177 Mar  7 15:37 agis_schedconf.cvmfs.json
[2026-03-07 17:20:05] -rw-------. 1 boinc boinc   1521291 Mar  7 15:37 agis_ddmendpoints.agis.ALL.json
[2026-03-07 17:20:05] -rw-------. 1 boinc boinc       444 Mar  7 15:37 workernode_map.json
[2026-03-07 17:20:05] drwx------. 5 boinc boinc      4096 Mar  7 15:37 pilot3
[2026-03-07 17:20:05] -rw-------. 1 boinc boinc 197703136 Mar  7 17:18 HITS.48966988._007268.pool.root.1
[2026-03-07 17:20:05] -rw-r--r--. 1 boinc boinc       530 Mar  7 17:19 boinc_task_state.xml
[2026-03-07 17:20:05] -rw-------. 1 boinc boinc      1030 Mar  7 17:19 memory_monitor_summary.json
[2026-03-07 17:20:05] -rw-------. 1 boinc boinc    289203 Mar  7 17:19 log.48966988._007268.job.log.tgz.1
[2026-03-07 17:20:05] -rw-------. 1 boinc boinc      6349 Mar  7 17:19 heartbeat.json
[2026-03-07 17:20:05] -rw-r--r--. 1 boinc boinc      8192 Mar  7 17:19 boinc_mmap_file
[2026-03-07 17:20:05] -rw-r--r--. 1 boinc boinc        27 Mar  7 17:19 wrapper_checkpoint.txt
[2026-03-07 17:20:05] -rw-------. 1 boinc boinc        95 Mar  7 17:20 pilot_heartbeat.json
[2026-03-07 17:20:05] -rw-------. 1 boinc boinc      4828 Mar  7 17:20 pilotlog.txt
[2026-03-07 17:20:05] -rw-------. 1 boinc boinc    881708 Mar  7 17:20 log.48966988._007268.job.log.1
[2026-03-07 17:20:05] -rw-------. 1 boinc boinc       357 Mar  7 17:20 output.list
[2026-03-07 17:20:05] -rw-r--r--. 1 boinc boinc       620 Mar  7 17:20 runtime_log
[2026-03-07 17:20:05] -rw-------. 1 boinc boinc   1187840 Mar  7 17:20 result.tar.gz
[2026-03-07 17:20:05] -rw-r--r--. 1 boinc boinc      9204 Mar  7 17:20 runtime_log.err
[2026-03-07 17:20:05] -rw-------. 1 boinc boinc       663 Mar  7 17:20 mR4LDmMMjI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmQpPLDmo6toCn.diag
[2026-03-07 17:20:05] -rw-r--r--. 1 boinc boinc     20858 Mar  7 17:20 stderr.txt
[2026-03-07 17:20:05] HITS file was successfully produced:
[2026-03-07 17:20:05] -rw-------. 1 boinc boinc 197703136 Mar  7 17:18 shared/HITS.pool.root.1
[2026-03-07 17:20:05]  *** Contents of shared directory: ***
[2026-03-07 17:20:05] total 401060
[2026-03-07 17:20:05] -rw-r--r--. 2 boinc boinc 211166452 Mar  7 15:37 ATLAS.root_0
[2026-03-07 17:20:05] -rw-r--r--. 2 boinc boinc     15845 Mar  7 15:37 start_atlas.sh
[2026-03-07 17:20:05] -rw-r--r--. 2 boinc boinc    597969 Mar  7 15:37 input.tar.gz
[2026-03-07 17:20:05] -rw-------. 1 boinc boinc 197703136 Mar  7 17:18 HITS.pool.root.1
[2026-03-07 17:20:05] -rw-------. 1 boinc boinc   1187840 Mar  7 17:20 result.tar.gz
17:20:07 (943818): run_atlas exited; CPU time 23612.696853
17:20:07 (943818): called boinc_finish(0)

</stderr_txt>
]]>

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