Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:46:02 (3403267): wrapper (7.7.26015): starting
19:46:02 (3403267): wrapper: running run_atlas (--nthreads 4)
[2026-03-06 19:46:02] Arguments: --nthreads 4
[2026-03-06 19:46:02] Threads: 4
[2026-03-06 19:46:02] Checking for CVMFS
[2026-03-06 19:46:02] No cvmfs_config command found, will try listing directly
[2026-03-06 19:46:02] CVMFS is ok
[2026-03-06 19:46:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 19:46:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 19:46:02] Further information can be found at the LHC@home message board.
[2026-03-06 19:46:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 19:46:02] Checking for apptainer binary...
[2026-03-06 19:46:02] which: no apptainer in ((null))
[2026-03-06 19:46:02] apptainer is not installed, using version from CVMFS
[2026-03-06 19:46:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 19:46:02] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot96/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-06 19:46:02] apptainer works
[2026-03-06 19:46:02] Set ATHENA_PROC_NUMBER=4
[2026-03-06 19:46:02] Set ATHENA_CORE_NUMBER=4
[2026-03-06 19:46:02] Starting ATLAS job with PandaID=7043262558
[2026-03-06 19:46:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot96/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 22:52:40]  *** The last 200 lines of the pilot log: ***
[2026-03-06 22:52:40] 2026-03-06 21:51:47,932 | INFO     | extracted standard info from prmon json
[2026-03-06 22:52:40] 2026-03-06 21:51:47,932 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 22:52:40] 2026-03-06 21:51:47,932 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 22:52:40] 2026-03-06 21:51:47,933 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 22:52:40] 2026-03-06 21:51:47,933 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 22:52:40] 2026-03-06 21:51:47,935 | INFO     | fitting pss+swap vs Time
[2026-03-06 22:52:40] 2026-03-06 21:51:47,935 | INFO     | sum of square deviations: 1900284932.0
[2026-03-06 22:52:40] 2026-03-06 21:51:47,936 | INFO     | sum of deviations: 11951638561.000002
[2026-03-06 22:52:40] 2026-03-06 21:51:47,936 | INFO     | mean x: 1772828347.0
[2026-03-06 22:52:40] 2026-03-06 21:51:47,936 | INFO     | mean y: 2315877.7213114756
[2026-03-06 22:52:40] 2026-03-06 21:51:47,936 | INFO     | intersect: -11147698142.407272
[2026-03-06 22:52:40] 2026-03-06 21:51:47,936 | INFO     | chi2: 1.9206041621085528
[2026-03-06 22:52:40] 2026-03-06 21:51:47,936 | INFO     | sum of square deviations: 1748737904.5
[2026-03-06 22:52:40] 2026-03-06 21:51:47,937 | INFO     | sum of deviations: 22992334933.500004
[2026-03-06 22:52:40] 2026-03-06 21:51:47,937 | INFO     | mean x: 1772828194.5
[2026-03-06 22:52:40] 2026-03-06 21:51:47,937 | INFO     | mean y: 2326729.7471910114
[2026-03-06 22:52:40] 2026-03-06 21:51:47,937 | INFO     | intersect: -23306746358.109634
[2026-03-06 22:52:40] 2026-03-06 21:51:47,937 | INFO     | chi2: 1.1097485239485516
[2026-03-06 22:52:40] 2026-03-06 21:51:47,937 | INFO     | current chi2=1.1097485239485516 (change=42.21877959848822 %)
[2026-03-06 22:52:40] 2026-03-06 21:51:47,937 | INFO     | sum of square deviations: 1605470102.0
[2026-03-06 22:52:40] 2026-03-06 21:51:47,938 | INFO     | sum of deviations: 22241787426.0
[2026-03-06 22:52:40] 2026-03-06 21:51:47,938 | INFO     | mean x: 1772828042.0
[2026-03-06 22:52:40] 2026-03-06 21:51:47,938 | INFO     | mean y: 2325930.61849711
[2026-03-06 22:52:40] 2026-03-06 21:51:47,938 | INFO     | intersect: -24557997182.153988
[2026-03-06 22:52:40] 2026-03-06 21:51:47,938 | INFO     | chi2: 1.1102082447099815
[2026-03-06 22:52:40] 2026-03-06 21:51:47,938 | INFO     | current chi2=1.1102082447099815 (change=-0.04142567000622325 %)
[2026-03-06 22:52:40] 2026-03-06 21:51:47,938 | INFO     | right removable region: 172
[2026-03-06 22:52:40] 2026-03-06 21:51:47,938 | INFO     | sum of square deviations: 1748737904.5
[2026-03-06 22:52:40] 2026-03-06 21:51:47,939 | INFO     | sum of deviations: -6961212853.499999
[2026-03-06 22:52:40] 2026-03-06 21:51:47,939 | INFO     | mean x: 1772828499.5
[2026-03-06 22:52:40] 2026-03-06 21:51:47,939 | INFO     | mean y: 2334609.3314606743
[2026-03-06 22:52:40] 2026-03-06 21:51:47,939 | INFO     | intersect: 7059445057.96617
[2026-03-06 22:52:40] 2026-03-06 21:51:47,939 | INFO     | chi2: 0.8303159774725145
[2026-03-06 22:52:40] 2026-03-06 21:51:47,939 | INFO     | current chi2=0.8303159774725145 (change=56.767979896443386 %)
[2026-03-06 22:52:40] 2026-03-06 21:51:47,939 | INFO     | sum of square deviations: 1605470102.0
[2026-03-06 22:52:40] 2026-03-06 21:51:47,940 | INFO     | sum of deviations: -7824347451.0
[2026-03-06 22:52:40] 2026-03-06 21:51:47,940 | INFO     | mean x: 1772828652.0
[2026-03-06 22:52:40] 2026-03-06 21:51:47,940 | INFO     | mean y: 2335524.832369942
[2026-03-06 22:52:40] 2026-03-06 21:51:47,940 | INFO     | intersect: 8642314137.362127
[2026-03-06 22:52:40] 2026-03-06 21:51:47,940 | INFO     | chi2: 0.8296141685857362
[2026-03-06 22:52:40] 2026-03-06 21:51:47,940 | INFO     | current chi2=0.8296141685857362 (change=0.08452310997490343 %)
[2026-03-06 22:52:40] 2026-03-06 21:51:47,940 | INFO     | left removable region: 20
[2026-03-06 22:52:40] 2026-03-06 21:51:47,940 | INFO     | sum of square deviations: 1088905998.0
[2026-03-06 22:52:40] 2026-03-06 21:51:47,941 | INFO     | sum of deviations: 2137787944.0
[2026-03-06 22:52:40] 2026-03-06 21:51:47,941 | INFO     | mean x: 1772828621.5
[2026-03-06 22:52:40] 2026-03-06 21:51:47,941 | INFO     | mean y: 2348413.1842105263
[2026-03-06 22:52:40] 2026-03-06 21:51:47,941 | INFO     | intersect: -3478146377.717694
[2026-03-06 22:52:40] 2026-03-06 21:51:47,941 | INFO     | chi2: 0.00012146688379692092
[2026-03-06 22:52:40] 2026-03-06 21:51:47,941 | INFO     | current memory leak: 1.96 B/s (using 152 data points, chi2=0.00)
[2026-03-06 22:52:40] 2026-03-06 21:51:47,941 | INFO     | could have reported an average CPU frequency of 3596 MHz (10 samples)
[2026-03-06 22:52:40] 2026-03-06 21:51:47,941 | INFO     | ..............................
[2026-03-06 22:52:40] 2026-03-06 21:51:47,941 | INFO     | . Timing measurements:
[2026-03-06 22:52:40] 2026-03-06 21:51:47,941 | INFO     | . get job = 0 s
[2026-03-06 22:52:40] 2026-03-06 21:51:47,941 | INFO     | . initial setup = 5 s
[2026-03-06 22:52:40] 2026-03-06 21:51:47,941 | INFO     | . payload setup = 5 s
[2026-03-06 22:52:40] 2026-03-06 21:51:47,941 | INFO     | . stage-in = 0 s
[2026-03-06 22:52:40] 2026-03-06 21:51:47,941 | INFO     | . payload execution = 11112 s
[2026-03-06 22:52:40] 2026-03-06 21:51:47,941 | INFO     | . stage-out = 0 s
[2026-03-06 22:52:40] 2026-03-06 21:51:47,941 | INFO     | . log creation = 0 s
[2026-03-06 22:52:40] 2026-03-06 21:51:47,941 | INFO     | ..............................
[2026-03-06 22:52:40] 2026-03-06 21:51:48,070 | INFO     | 
[2026-03-06 22:52:40] 2026-03-06 21:51:48,070 | INFO     | job summary report
[2026-03-06 22:52:40] 2026-03-06 21:51:48,070 | INFO     | --------------------------------------------------
[2026-03-06 22:52:40] 2026-03-06 21:51:48,070 | INFO     | PanDA job id: 7043262558
[2026-03-06 22:52:40] 2026-03-06 21:51:48,070 | INFO     | task id: 48967059
[2026-03-06 22:52:40] 2026-03-06 21:51:48,070 | INFO     | errors: (none)
[2026-03-06 22:52:40] 2026-03-06 21:51:48,070 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 22:52:40] 2026-03-06 21:51:48,070 | INFO     | pilot state: finished 
[2026-03-06 22:52:40] 2026-03-06 21:51:48,070 | INFO     | transexitcode: 0
[2026-03-06 22:52:40] 2026-03-06 21:51:48,070 | INFO     | exeerrorcode: 0
[2026-03-06 22:52:40] 2026-03-06 21:51:48,070 | INFO     | exeerrordiag: 
[2026-03-06 22:52:40] 2026-03-06 21:51:48,070 | INFO     | exitcode: 0
[2026-03-06 22:52:40] 2026-03-06 21:51:48,071 | INFO     | exitmsg: OK
[2026-03-06 22:52:40] 2026-03-06 21:51:48,071 | INFO     | cpuconsumptiontime: 43106 s
[2026-03-06 22:52:40] 2026-03-06 21:51:48,071 | INFO     | nevents: 400
[2026-03-06 22:52:40] 2026-03-06 21:51:48,071 | INFO     | neventsw: 0
[2026-03-06 22:52:40] 2026-03-06 21:51:48,071 | INFO     | pid: 3428219
[2026-03-06 22:52:40] 2026-03-06 21:51:48,071 | INFO     | pgrp: 3428219
[2026-03-06 22:52:40] 2026-03-06 21:51:48,071 | INFO     | corecount: 4
[2026-03-06 22:52:40] 2026-03-06 21:51:48,071 | INFO     | event service: False
[2026-03-06 22:52:40] 2026-03-06 21:51:48,071 | INFO     | sizes: {0: 2295792, 11: 2295792, 11121: 2324988, 11122: 2334202}
[2026-03-06 22:52:40] 2026-03-06 21:51:48,071 | INFO     | --------------------------------------------------
[2026-03-06 22:52:40] 2026-03-06 21:51:48,071 | INFO     | 
[2026-03-06 22:52:40] 2026-03-06 21:51:48,071 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot96/slots/2
[2026-03-06 22:52:40] 2026-03-06 21:51:48,087 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 22:52:40] 2026-03-06 21:51:48,087 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 22:52:40] 2026-03-06 21:51:48,087 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 22:52:40] 2026-03-06 21:51:48,087 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 22:52:40] 2026-03-06 21:51:48,087 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 22:52:40] 2026-03-06 21:51:48,087 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 22:52:40] 2026-03-06 21:51:48,087 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 22:52:40] 2026-03-06 21:51:48,087 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 22:52:40] 2026-03-06 21:51:48,087 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 22:52:40] 2026-03-06 21:51:48,087 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 22:52:40] 2026-03-06 21:51:48,087 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 22:52:40] 2026-03-06 21:51:48,087 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 22:52:40] 2026-03-06 21:51:48,087 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 22:52:40] 2026-03-06 21:51:48,087 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 22:52:40] 2026-03-06 21:51:48,087 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 22:52:40] 2026-03-06 21:51:48,087 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 22:52:40] 2026-03-06 21:51:48,087 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 22:52:40] 2026-03-06 21:51:48,087 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 22:52:40] 2026-03-06 21:51:48,087 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 22:52:40] 2026-03-06 21:51:48,087 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 22:52:40] 2026-03-06 21:51:48,087 | INFO     | job 7043262558 has completed (purged errors)
[2026-03-06 22:52:40] 2026-03-06 21:51:48,088 | INFO     | overall cleanup function is called
[2026-03-06 22:52:40] 2026-03-06 21:51:49,094 | INFO     | --- collectZombieJob: --- 10, [3428219]
[2026-03-06 22:52:40] 2026-03-06 21:51:49,094 | INFO     | zombie collector waiting for pid 3428219
[2026-03-06 22:52:40] 2026-03-06 21:51:49,094 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 22:52:40] 2026-03-06 21:51:49,094 | INFO     | collected zombie processes
[2026-03-06 22:52:40] 2026-03-06 21:51:49,094 | INFO     | will attempt to kill all subprocesses of pid=3428219
[2026-03-06 22:52:40] 2026-03-06 21:51:49,616 | INFO     | process IDs to be killed: [3428219] (in reverse order)
[2026-03-06 22:52:40] 2026-03-06 21:51:49,857 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 22:52:40] 2026-03-06 21:51:49,857 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 22:52:40] 2026-03-06 21:51:49,889 | INFO     | did not find any defunct processes belonging to 3428219
[2026-03-06 22:52:40] 2026-03-06 21:51:49,921 | INFO     | did not find any defunct processes belonging to 3428219
[2026-03-06 22:52:40] 2026-03-06 21:51:49,922 | INFO     | ready for new job
[2026-03-06 22:52:40] 2026-03-06 21:51:49,922 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 22:52:40] 2026-03-06 21:51:49,923 | INFO     | **************************************
[2026-03-06 22:52:40] 2026-03-06 21:51:49,923 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 22:52:40] 2026-03-06 21:51:49,923 | INFO     | **************************************
[2026-03-06 22:52:40] 2026-03-06 21:51:49,923 | INFO     | 
[2026-03-06 22:52:40] 2026-03-06 21:51:49,929 | INFO     | architecture information:
[2026-03-06 22:52:40] 2026-03-06 21:51:49,929 | INFO     | executing command: cat /etc/os-release
[2026-03-06 22:52:40] 2026-03-06 21:51:49,943 | INFO     | cat /etc/os-release:
[2026-03-06 22:52:40] NAME="CentOS Linux"
[2026-03-06 22:52:40] VERSION="7 (Core)"
[2026-03-06 22:52:40] ID="centos"
[2026-03-06 22:52:40] ID_LIKE="rhel fedora"
[2026-03-06 22:52:40] VERSION_ID="7"
[2026-03-06 22:52:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 22:52:40] ANSI_COLOR="0;31"
[2026-03-06 22:52:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 22:52:40] HOME_URL="https://www.centos.org/"
[2026-03-06 22:52:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 22:52:40] 
[2026-03-06 22:52:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 22:52:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 22:52:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 22:52:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 22:52:40] 
[2026-03-06 22:52:40] 2026-03-06 21:51:49,943 | INFO     | **************************************
[2026-03-06 22:52:40] 2026-03-06 21:51:50,446 | INFO     | executing command: df -mP /var/lib/boinc/var/slot96/slots/2
[2026-03-06 22:52:40] 2026-03-06 21:51:50,465 | INFO     | sufficient remaining disk space (19795017728 B)
[2026-03-06 22:52:40] 2026-03-06 21:51:50,465 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 22:52:40] 2026-03-06 21:51:50,465 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 22:52:40] 2026-03-06 21:51:50,465 | INFO     | update_server=False
[2026-03-06 22:52:40] 2026-03-06 21:51:50,465 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 22:52:40] 2026-03-06 21:51:50,491 | INFO     | all payload control threads have been joined
[2026-03-06 22:52:40] 2026-03-06 21:51:50,855 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 22:52:40] 2026-03-06 21:51:51,391 | INFO     | all data control threads have been joined
[2026-03-06 22:52:40] 2026-03-06 21:51:51,470 | INFO     | [job] retrieve thread has finished
[2026-03-06 22:52:40] 2026-03-06 21:51:51,496 | INFO     | [payload] control thread has finished
[2026-03-06 22:52:40] 2026-03-06 21:51:51,581 | INFO     | all job control threads have been joined
[2026-03-06 22:52:40] 2026-03-06 21:51:52,012 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 22:52:40] 2026-03-06 21:51:52,029 | INFO     | [payload] failed_post thread has finished
[2026-03-06 22:52:40] 2026-03-06 21:51:52,141 | INFO     | [job] validate thread has finished
[2026-03-06 22:52:40] 2026-03-06 21:51:52,150 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 22:52:40] 2026-03-06 21:51:52,396 | INFO     | [data] control thread has finished
[2026-03-06 22:52:40] 2026-03-06 21:51:52,586 | INFO     | [job] control thread has finished
[2026-03-06 22:52:40] 2026-03-06 21:51:52,587 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 22:52:40] 2026-03-06 21:51:52,600 | WARNING  | process 3428219 can no longer be monitored (due to stat problems) - aborting
[2026-03-06 22:52:40] 2026-03-06 21:51:52,797 | INFO     | [data] copytool_in thread has finished
[2026-03-06 22:52:40] 2026-03-06 21:51:52,865 | INFO     | [data] copytool_out thread has finished
[2026-03-06 22:52:40] 2026-03-06 21:51:52,886 | INFO     | [payload] validate_post thread has finished
[2026-03-06 22:52:40] 2026-03-06 21:51:52,934 | INFO     | using path: /var/lib/boinc/var/slot96/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 22:52:40] 2026-03-06 21:51:52,949 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 22:52:40] 2026-03-06 21:51:53,001 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 22:52:40] 2026-03-06 21:51:53,447 | INFO     | number of running child processes to parent process 3428219: 1
[2026-03-06 22:52:40] 2026-03-06 21:51:53,448 | INFO     | maximum number of monitored processes: 6
[2026-03-06 22:52:40] 2026-03-06 21:51:53,448 | INFO     | aborting job monitoring since job object (job id=7043262558) has expired
[2026-03-06 22:52:40] 2026-03-06 21:51:53,448 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 22:52:40] 2026-03-06 21:51:53,448 | INFO     | will abort loop
[2026-03-06 22:52:40] 2026-03-06 21:51:53,916 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 22:52:40] 2026-03-06 21:51:54,006 | INFO     | [job] queue monitor thread has finished
[2026-03-06 22:52:40] 2026-03-06 21:51:54,453 | INFO     | [job] job monitor thread has finished
[2026-03-06 22:52:40] 2026-03-06 21:51:57,923 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 22:52:40] 2026-03-06 21:52:20,583 | INFO     | PID=3409207 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 22:52:40] 2026-03-06 21:52:20,583 | INFO     | .. there are 46 such processes running
[2026-03-06 22:52:40] 2026-03-06 21:52:20,583 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 22:52:40] 2026-03-06 21:52:20,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 22:52:40] 2026-03-06 21:52:20,583 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 22:52:40] 2026-03-06 21:52:33,144 | INFO     | [monitor] cgroup control has ended
[2026-03-06 22:52:40] 2026-03-06 21:52:35,157 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22778026223424)>', '<ExcThread(monitor, started 22777783654144)>']
[2026-03-06 22:52:40] 2026-03-06 21:52:35,658 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 22:52:40] 2026-03-06 21:52:35,658 | INFO     | [monitor] control thread has ended
[2026-03-06 22:52:40] 2026-03-06 21:52:40,172 | INFO     | all workflow threads have been joined
[2026-03-06 22:52:40] 2026-03-06 21:52:40,172 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 22:52:40] 2026-03-06 21:52:40,172 | INFO     | traces error code: 0
[2026-03-06 22:52:40] 2026-03-06 21:52:40,172 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 22:52:40] 2026-03-06 21:52:40,370 [wrapper] ==== pilot stdout END ====
[2026-03-06 22:52:40] 2026-03-06 21:52:40,372 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 22:52:40] 2026-03-06 21:52:40,375 [wrapper] pilotpid: 3409207
[2026-03-06 22:52:40] 2026-03-06 21:52:40,378 [wrapper] Pilot exit status: 0
[2026-03-06 22:52:40] 2026-03-06 21:52:40,387 [wrapper] pandaids: 7043262558
[2026-03-06 22:52:40] 2026-03-06 21:52:40,526 [wrapper] cleanup supervisor_pilot  752072 3409208
[2026-03-06 22:52:40] 2026-03-06 21:52:40,529 [wrapper] Test setup, not cleaning
[2026-03-06 22:52:40] 2026-03-06 21:52:40,532 [wrapper] apfmon messages muted
[2026-03-06 22:52:40] 2026-03-06 21:52:40,535 [wrapper] ==== wrapper stdout END ====
[2026-03-06 22:52:40] 2026-03-06 21:52:40,537 [wrapper] ==== wrapper stderr END ====
[2026-03-06 22:52:40]  *** Error codes and diagnostics ***
[2026-03-06 22:52:40]     "exeErrorCode": 0,
[2026-03-06 22:52:40]     "exeErrorDiag": "",
[2026-03-06 22:52:40]     "pilotErrorCode": 0,
[2026-03-06 22:52:40]     "pilotErrorDiag": "",
[2026-03-06 22:52:40]  *** Listing of results directory ***
[2026-03-06 22:52:40] total 490492
[2026-03-06 22:52:40] -rw-r--r--. 1 boinc boinc    584627 Mar  6 14:23 pilot3.tar.gz
[2026-03-06 22:52:40] -rwx------. 1 boinc boinc     36322 Mar  6 14:52 runpilot2-wrapper.sh
[2026-03-06 22:52:40] -rw-r--r--. 1 boinc boinc      5111 Mar  6 14:52 queuedata.json
[2026-03-06 22:52:40] -rw-r--r--. 1 boinc boinc       100 Mar  6 19:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 22:52:40] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 19:45 run_atlas
[2026-03-06 22:52:40] -rw-r--r--. 1 boinc boinc       105 Mar  6 19:45 job.xml
[2026-03-06 22:52:40] -rw-r--r--. 1 boinc boinc      6705 Mar  6 19:46 init_data.xml
[2026-03-06 22:52:40] -rw-r--r--. 2 boinc boinc 229827451 Mar  6 19:46 EVNT.48967057._000005.pool.root.1
[2026-03-06 22:52:40] -rw-r--r--. 2 boinc boinc     15845 Mar  6 19:46 start_atlas.sh
[2026-03-06 22:52:40] drwxrwx--x. 2 boinc boinc      4096 Mar  6 19:46 shared
[2026-03-06 22:52:40] -rw-r--r--. 2 boinc boinc    597936 Mar  6 19:46 input.tar.gz
[2026-03-06 22:52:40] -rw-r--r--. 1 boinc boinc         0 Mar  6 19:46 boinc_lockfile
[2026-03-06 22:52:40] -rw-r--r--. 1 boinc boinc      2545 Mar  6 19:46 pandaJob.out
[2026-03-06 22:52:40] -rw-------. 1 boinc boinc    999496 Mar  6 19:46 agis_schedconf.cvmfs.json
[2026-03-06 22:52:40] -rw-------. 1 boinc boinc       440 Mar  6 19:46 workernode_map.json
[2026-03-06 22:52:40] drwx------. 5 boinc boinc      4096 Mar  6 19:46 pilot3
[2026-03-06 22:52:40] -rw-r--r--. 1 boinc boinc       529 Mar  6 22:51 boinc_task_state.xml
[2026-03-06 22:52:40] -rw-------. 1 boinc boinc 264609957 Mar  6 22:51 HITS.48967059._000069.pool.root.1
[2026-03-06 22:52:40] -rw-------. 1 boinc boinc        95 Mar  6 22:51 pilot_heartbeat.json
[2026-03-06 22:52:40] -rw-------. 1 boinc boinc      1033 Mar  6 22:51 memory_monitor_summary.json
[2026-03-06 22:52:40] -rw-------. 1 boinc boinc   1521291 Mar  6 22:51 agis_ddmendpoints.agis.ALL.json
[2026-03-06 22:52:40] -rw-------. 1 boinc boinc    368697 Mar  6 22:51 log.48967059._000069.job.log.tgz.1
[2026-03-06 22:52:40] -rw-------. 1 boinc boinc      6348 Mar  6 22:51 heartbeat.json
[2026-03-06 22:52:40] -rw-r--r--. 1 boinc boinc        27 Mar  6 22:52 wrapper_checkpoint.txt
[2026-03-06 22:52:40] -rw-r--r--. 1 boinc boinc      8192 Mar  6 22:52 boinc_mmap_file
[2026-03-06 22:52:40] -rw-------. 1 boinc boinc      5361 Mar  6 22:52 pilotlog.txt
[2026-03-06 22:52:40] -rw-------. 1 boinc boinc   1569431 Mar  6 22:52 log.48967059._000069.job.log.1
[2026-03-06 22:52:40] -rw-------. 1 boinc boinc       357 Mar  6 22:52 output.list
[2026-03-06 22:52:40] -rw-r--r--. 1 boinc boinc       620 Mar  6 22:52 runtime_log
[2026-03-06 22:52:40] -rw-------. 1 boinc boinc   1955840 Mar  6 22:52 result.tar.gz
[2026-03-06 22:52:40] -rw-r--r--. 1 boinc boinc      9205 Mar  6 22:52 runtime_log.err
[2026-03-06 22:52:40] -rw-------. 1 boinc boinc       665 Mar  6 22:52 91ENDmTmkI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm7KSLDmVRhu7n.diag
[2026-03-06 22:52:40] -rw-r--r--. 1 boinc boinc     20827 Mar  6 22:52 stderr.txt
[2026-03-06 22:52:40] HITS file was successfully produced:
[2026-03-06 22:52:40] -rw-------. 1 boinc boinc 264609957 Mar  6 22:51 shared/HITS.pool.root.1
[2026-03-06 22:52:40]  *** Contents of shared directory: ***
[2026-03-06 22:52:40] total 485376
[2026-03-06 22:52:40] -rw-r--r--. 2 boinc boinc 229827451 Mar  6 19:46 ATLAS.root_0
[2026-03-06 22:52:40] -rw-r--r--. 2 boinc boinc     15845 Mar  6 19:46 start_atlas.sh
[2026-03-06 22:52:40] -rw-r--r--. 2 boinc boinc    597936 Mar  6 19:46 input.tar.gz
[2026-03-06 22:52:40] -rw-------. 1 boinc boinc 264609957 Mar  6 22:51 HITS.pool.root.1
[2026-03-06 22:52:40] -rw-------. 1 boinc boinc   1955840 Mar  6 22:52 result.tar.gz
22:52:42 (3403267): run_atlas exited; CPU time 43658.362603
22:52:42 (3403267): called boinc_finish(0)

</stderr_txt>
]]>

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