Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:45:35 (1382247): wrapper (7.7.26015): starting
14:45:35 (1382247): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 14:45:35] Arguments: --nthreads 4
[2026-03-07 14:45:35] Threads: 4
[2026-03-07 14:45:35] Checking for CVMFS
[2026-03-07 14:45:35] No cvmfs_config command found, will try listing directly
[2026-03-07 14:45:35] CVMFS is ok
[2026-03-07 14:45:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 14:45:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 14:45:35] Further information can be found at the LHC@home message board.
[2026-03-07 14:45:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 14:45:35] Checking for apptainer binary...
[2026-03-07 14:45:35] which: no apptainer in ((null))
[2026-03-07 14:45:35] apptainer is not installed, using version from CVMFS
[2026-03-07 14:45:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 14:45:35] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2026-03-07 14:45:35] apptainer works
[2026-03-07 14:45:35] Set ATHENA_PROC_NUMBER=4
[2026-03-07 14:45:35] Set ATHENA_CORE_NUMBER=4
[2026-03-07 14:45:35] Starting ATLAS job with PandaID=7043067130
[2026-03-07 14:45:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 18:47:20]  *** The last 200 lines of the pilot log: ***
[2026-03-07 18:47:20] 2026-03-07 17:46:18,483 | INFO     | extracted standard info from prmon json
[2026-03-07 18:47:20] 2026-03-07 17:46:18,483 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 18:47:20] 2026-03-07 17:46:18,484 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 18:47:20] 2026-03-07 17:46:18,484 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 18:47:20] 2026-03-07 17:46:18,484 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 18:47:20] 2026-03-07 17:46:18,488 | INFO     | fitting pss+swap vs Time
[2026-03-07 18:47:20] 2026-03-07 17:46:18,489 | INFO     | sum of square deviations: 4127772278.0
[2026-03-07 18:47:20] 2026-03-07 17:46:18,490 | INFO     | sum of deviations: -6976587141.000002
[2026-03-07 18:47:20] 2026-03-07 17:46:18,490 | INFO     | mean x: 1772898372.0
[2026-03-07 18:47:20] 2026-03-07 17:46:18,490 | INFO     | mean y: 2324141.835443038
[2026-03-07 18:47:20] 2026-03-07 17:46:18,490 | INFO     | intersect: 2998802423.9145103
[2026-03-07 18:47:20] 2026-03-07 17:46:18,491 | INFO     | chi2: 2.333245351761178
[2026-03-07 18:47:20] 2026-03-07 17:46:18,491 | INFO     | sum of square deviations: 3871990738.0
[2026-03-07 18:47:20] 2026-03-07 17:46:18,493 | INFO     | sum of deviations: 9550506632.500002
[2026-03-07 18:47:20] 2026-03-07 17:46:18,493 | INFO     | mean x: 1772898219.5
[2026-03-07 18:47:20] 2026-03-07 17:46:18,493 | INFO     | mean y: 2333826.4353448274
[2026-03-07 18:47:20] 2026-03-07 17:46:18,493 | INFO     | intersect: -4370630198.997248
[2026-03-07 18:47:20] 2026-03-07 17:46:18,493 | INFO     | chi2: 1.338508236921714
[2026-03-07 18:47:20] 2026-03-07 17:46:18,497 | INFO     | current chi2=1.338508236921714 (change=42.633198179892126 %)
[2026-03-07 18:47:20] 2026-03-07 17:46:18,497 | INFO     | sum of square deviations: 3627000098.0
[2026-03-07 18:47:20] 2026-03-07 17:46:18,499 | INFO     | sum of deviations: 9219497788.000002
[2026-03-07 18:47:20] 2026-03-07 17:46:18,499 | INFO     | mean x: 1772898067.0
[2026-03-07 18:47:20] 2026-03-07 17:46:18,499 | INFO     | mean y: 2333620.387665198
[2026-03-07 18:47:20] 2026-03-07 17:46:18,499 | INFO     | intersect: -4504208801.838644
[2026-03-07 18:47:20] 2026-03-07 17:46:18,499 | INFO     | chi2: 1.3388417199388913
[2026-03-07 18:47:20] 2026-03-07 17:46:18,499 | INFO     | current chi2=1.3388417199388913 (change=-0.02491452857579893 %)
[2026-03-07 18:47:20] 2026-03-07 17:46:18,500 | INFO     | right removable region: 226
[2026-03-07 18:47:20] 2026-03-07 17:46:18,500 | INFO     | sum of square deviations: 3871990738.0
[2026-03-07 18:47:20] 2026-03-07 17:46:18,501 | INFO     | sum of deviations: -33905321950.0
[2026-03-07 18:47:20] 2026-03-07 17:46:18,501 | INFO     | mean x: 1772898524.5
[2026-03-07 18:47:20] 2026-03-07 17:46:18,502 | INFO     | mean y: 2339993.7155172415
[2026-03-07 18:47:20] 2026-03-07 17:46:18,502 | INFO     | intersect: 15526833548.909672
[2026-03-07 18:47:20] 2026-03-07 17:46:18,502 | INFO     | chi2: 1.0966913522540127
[2026-03-07 18:47:20] 2026-03-07 17:46:18,502 | INFO     | current chi2=1.0966913522540127 (change=52.99716973929856 %)
[2026-03-07 18:47:20] 2026-03-07 17:46:18,502 | INFO     | sum of square deviations: 3627000098.0
[2026-03-07 18:47:20] 2026-03-07 17:46:18,504 | INFO     | sum of deviations: -28589167985.0
[2026-03-07 18:47:20] 2026-03-07 17:46:18,504 | INFO     | mean x: 1772898677.0
[2026-03-07 18:47:20] 2026-03-07 17:46:18,504 | INFO     | mean y: 2336680.845814978
[2026-03-07 18:47:20] 2026-03-07 17:46:18,504 | INFO     | intersect: 13976887749.947346
[2026-03-07 18:47:20] 2026-03-07 17:46:18,505 | INFO     | chi2: 1.0856317638333655
[2026-03-07 18:47:20] 2026-03-07 17:46:18,505 | INFO     | current chi2=1.0856317638333655 (change=1.0084504083958215 %)
[2026-03-07 18:47:20] 2026-03-07 17:46:18,505 | INFO     | left removable region: 20
[2026-03-07 18:47:20] 2026-03-07 17:46:18,505 | INFO     | sum of square deviations: 2710627567.5
[2026-03-07 18:47:20] 2026-03-07 17:46:18,506 | INFO     | sum of deviations: -1133237839.500001
[2026-03-07 18:47:20] 2026-03-07 17:46:18,506 | INFO     | mean x: 1772898646.5
[2026-03-07 18:47:20] 2026-03-07 17:46:18,506 | INFO     | mean y: 2339065.150485437
[2026-03-07 18:47:20] 2026-03-07 17:46:18,507 | INFO     | intersect: 743538577.7287238
[2026-03-07 18:47:20] 2026-03-07 17:46:18,507 | INFO     | chi2: 0.02364359249007301
[2026-03-07 18:47:20] 2026-03-07 17:46:18,507 | INFO     | current memory leak: -0.42 B/s (using 206 data points, chi2=0.02)
[2026-03-07 18:47:20] 2026-03-07 17:46:18,507 | INFO     | could have reported an average CPU frequency of 2583 MHz (11 samples)
[2026-03-07 18:47:20] 2026-03-07 17:46:18,508 | INFO     | ..............................
[2026-03-07 18:47:20] 2026-03-07 17:46:18,508 | INFO     | . Timing measurements:
[2026-03-07 18:47:20] 2026-03-07 17:46:18,508 | INFO     | . get job = 0 s
[2026-03-07 18:47:20] 2026-03-07 17:46:18,508 | INFO     | . initial setup = 6 s
[2026-03-07 18:47:20] 2026-03-07 17:46:18,508 | INFO     | . payload setup = 6 s
[2026-03-07 18:47:20] 2026-03-07 17:46:18,508 | INFO     | . stage-in = 0 s
[2026-03-07 18:47:20] 2026-03-07 17:46:18,508 | INFO     | . payload execution = 14400 s
[2026-03-07 18:47:20] 2026-03-07 17:46:18,508 | INFO     | . stage-out = 1 s
[2026-03-07 18:47:20] 2026-03-07 17:46:18,508 | INFO     | . log creation = 0 s
[2026-03-07 18:47:20] 2026-03-07 17:46:18,508 | INFO     | ..............................
[2026-03-07 18:47:20] 2026-03-07 17:46:18,604 | INFO     | 
[2026-03-07 18:47:20] 2026-03-07 17:46:18,604 | INFO     | job summary report
[2026-03-07 18:47:20] 2026-03-07 17:46:18,604 | INFO     | --------------------------------------------------
[2026-03-07 18:47:20] 2026-03-07 17:46:18,604 | INFO     | PanDA job id: 7043067130
[2026-03-07 18:47:20] 2026-03-07 17:46:18,605 | INFO     | task id: 48966988
[2026-03-07 18:47:20] 2026-03-07 17:46:18,605 | INFO     | errors: (none)
[2026-03-07 18:47:20] 2026-03-07 17:46:18,605 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 18:47:20] 2026-03-07 17:46:18,605 | INFO     | pilot state: finished 
[2026-03-07 18:47:20] 2026-03-07 17:46:18,605 | INFO     | transexitcode: 0
[2026-03-07 18:47:20] 2026-03-07 17:46:18,605 | INFO     | exeerrorcode: 0
[2026-03-07 18:47:20] 2026-03-07 17:46:18,605 | INFO     | exeerrordiag: 
[2026-03-07 18:47:20] 2026-03-07 17:46:18,605 | INFO     | exitcode: 0
[2026-03-07 18:47:20] 2026-03-07 17:46:18,605 | INFO     | exitmsg: OK
[2026-03-07 18:47:20] 2026-03-07 17:46:18,605 | INFO     | cpuconsumptiontime: 53863 s
[2026-03-07 18:47:20] 2026-03-07 17:46:18,605 | INFO     | nevents: 400
[2026-03-07 18:47:20] 2026-03-07 17:46:18,605 | INFO     | neventsw: 0
[2026-03-07 18:47:20] 2026-03-07 17:46:18,605 | INFO     | pid: 1391238
[2026-03-07 18:47:20] 2026-03-07 17:46:18,605 | INFO     | pgrp: 1391238
[2026-03-07 18:47:20] 2026-03-07 17:46:18,606 | INFO     | corecount: 4
[2026-03-07 18:47:20] 2026-03-07 17:46:18,606 | INFO     | event service: False
[2026-03-07 18:47:20] 2026-03-07 17:46:18,606 | INFO     | sizes: {0: 2295853, 11: 2295853, 14410: 2326672, 14413: 2335692, 14414: 2335748, 14415: 2335942}
[2026-03-07 18:47:20] 2026-03-07 17:46:18,606 | INFO     | --------------------------------------------------
[2026-03-07 18:47:20] 2026-03-07 17:46:18,606 | INFO     | 
[2026-03-07 18:47:20] 2026-03-07 17:46:18,606 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot40/slots/0
[2026-03-07 18:47:20] 2026-03-07 17:46:18,634 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 18:47:20] 2026-03-07 17:46:18,634 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 18:47:20] 2026-03-07 17:46:18,634 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 18:47:20] 2026-03-07 17:46:18,634 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 18:47:20] 2026-03-07 17:46:18,635 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 18:47:20] 2026-03-07 17:46:18,635 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 18:47:20] 2026-03-07 17:46:18,635 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 18:47:20] 2026-03-07 17:46:18,635 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 18:47:20] 2026-03-07 17:46:18,635 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 18:47:20] 2026-03-07 17:46:18,635 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 18:47:20] 2026-03-07 17:46:18,635 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 18:47:20] 2026-03-07 17:46:18,635 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 18:47:20] 2026-03-07 17:46:18,635 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 18:47:20] 2026-03-07 17:46:18,635 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 18:47:20] 2026-03-07 17:46:18,635 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 18:47:20] 2026-03-07 17:46:18,635 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 18:47:20] 2026-03-07 17:46:18,635 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 18:47:20] 2026-03-07 17:46:18,636 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 18:47:20] 2026-03-07 17:46:18,636 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 18:47:20] 2026-03-07 17:46:18,636 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 18:47:20] 2026-03-07 17:46:18,636 | INFO     | job 7043067130 has completed (purged errors)
[2026-03-07 18:47:20] 2026-03-07 17:46:18,636 | INFO     | overall cleanup function is called
[2026-03-07 18:47:20] 2026-03-07 17:46:19,643 | INFO     | --- collectZombieJob: --- 10, [1391238]
[2026-03-07 18:47:20] 2026-03-07 17:46:19,643 | INFO     | zombie collector waiting for pid 1391238
[2026-03-07 18:47:20] 2026-03-07 17:46:19,643 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 18:47:20] 2026-03-07 17:46:19,643 | INFO     | collected zombie processes
[2026-03-07 18:47:20] 2026-03-07 17:46:19,643 | INFO     | will attempt to kill all subprocesses of pid=1391238
[2026-03-07 18:47:20] 2026-03-07 17:46:20,447 | WARNING  | process 1391238 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 18:47:20] 2026-03-07 17:46:20,622 | INFO     | process IDs to be killed: [1391238] (in reverse order)
[2026-03-07 18:47:20] 2026-03-07 17:46:20,843 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 18:47:20] 2026-03-07 17:46:20,844 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 18:47:20] 2026-03-07 17:46:20,872 | INFO     | did not find any defunct processes belonging to 1391238
[2026-03-07 18:47:20] 2026-03-07 17:46:20,907 | INFO     | did not find any defunct processes belonging to 1391238
[2026-03-07 18:47:20] 2026-03-07 17:46:20,907 | INFO     | ready for new job
[2026-03-07 18:47:20] 2026-03-07 17:46:20,907 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 18:47:20] 2026-03-07 17:46:20,909 | INFO     | **************************************
[2026-03-07 18:47:20] 2026-03-07 17:46:20,913 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 18:47:20] 2026-03-07 17:46:20,913 | INFO     | **************************************
[2026-03-07 18:47:20] 2026-03-07 17:46:20,913 | INFO     | 
[2026-03-07 18:47:20] 2026-03-07 17:46:20,921 | INFO     | architecture information:
[2026-03-07 18:47:20] 2026-03-07 17:46:20,922 | INFO     | executing command: cat /etc/os-release
[2026-03-07 18:47:20] 2026-03-07 17:46:20,940 | INFO     | using path: /var/lib/boinc/var/slot40/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 18:47:20] 2026-03-07 17:46:20,943 | INFO     | cat /etc/os-release:
[2026-03-07 18:47:20] NAME="CentOS Linux"
[2026-03-07 18:47:20] VERSION="7 (Core)"
[2026-03-07 18:47:20] ID="centos"
[2026-03-07 18:47:20] ID_LIKE="rhel fedora"
[2026-03-07 18:47:20] VERSION_ID="7"
[2026-03-07 18:47:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 18:47:20] ANSI_COLOR="0;31"
[2026-03-07 18:47:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 18:47:20] HOME_URL="https://www.centos.org/"
[2026-03-07 18:47:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 18:47:20] 
[2026-03-07 18:47:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 18:47:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 18:47:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 18:47:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 18:47:20] 
[2026-03-07 18:47:20] 2026-03-07 17:46:20,944 | INFO     | **************************************
[2026-03-07 18:47:20] 2026-03-07 17:46:21,409 | INFO     | number of running child processes to parent process 1391238: 1
[2026-03-07 18:47:20] 2026-03-07 17:46:21,409 | INFO     | maximum number of monitored processes: 6
[2026-03-07 18:47:20] 2026-03-07 17:46:21,409 | INFO     | aborting job monitoring since job object (job id=7043067130) has expired
[2026-03-07 18:47:20] 2026-03-07 17:46:21,446 | INFO     | executing command: df -mP /var/lib/boinc/var/slot40/slots/0
[2026-03-07 18:47:20] 2026-03-07 17:46:21,466 | INFO     | sufficient remaining disk space (20874002432 B)
[2026-03-07 18:47:20] 2026-03-07 17:46:21,466 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 18:47:20] 2026-03-07 17:46:21,466 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 18:47:20] 2026-03-07 17:46:21,467 | INFO     | update_server=False
[2026-03-07 18:47:20] 2026-03-07 17:46:21,467 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 18:47:20] 2026-03-07 17:46:21,467 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 18:47:20] 2026-03-07 17:46:21,467 | INFO     | will abort loop
[2026-03-07 18:47:20] 2026-03-07 17:46:21,474 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 18:47:20] 2026-03-07 17:46:22,071 | INFO     | all payload control threads have been joined
[2026-03-07 18:47:20] 2026-03-07 17:46:22,131 | INFO     | all data control threads have been joined
[2026-03-07 18:47:20] 2026-03-07 17:46:22,472 | INFO     | [job] job monitor thread has finished
[2026-03-07 18:47:20] 2026-03-07 17:46:22,473 | INFO     | [job] retrieve thread has finished
[2026-03-07 18:47:20] 2026-03-07 17:46:22,478 | INFO     | [payload] validate_post thread has finished
[2026-03-07 18:47:20] 2026-03-07 17:46:22,813 | INFO     | [job] validate thread has finished
[2026-03-07 18:47:20] 2026-03-07 17:46:22,956 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 18:47:20] 2026-03-07 17:46:22,977 | INFO     | [data] copytool_in thread has finished
[2026-03-07 18:47:20] 2026-03-07 17:46:23,034 | INFO     | all job control threads have been joined
[2026-03-07 18:47:20] 2026-03-07 17:46:23,070 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 18:47:20] 2026-03-07 17:46:23,076 | INFO     | [payload] control thread has finished
[2026-03-07 18:47:20] 2026-03-07 17:46:23,136 | INFO     | [data] control thread has finished
[2026-03-07 18:47:20] 2026-03-07 17:46:23,263 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 18:47:20] 2026-03-07 17:46:23,362 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 18:47:20] 2026-03-07 17:46:23,479 | INFO     | [data] copytool_out thread has finished
[2026-03-07 18:47:20] 2026-03-07 17:46:23,487 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 18:47:20] 2026-03-07 17:46:23,488 | INFO     | [payload] failed_post thread has finished
[2026-03-07 18:47:20] 2026-03-07 17:46:23,614 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 18:47:20] 2026-03-07 17:46:24,039 | INFO     | [job] control thread has finished
[2026-03-07 18:47:20] 2026-03-07 17:46:24,619 | INFO     | [job] queue monitor thread has finished
[2026-03-07 18:47:20] 2026-03-07 17:46:26,961 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 18:47:20] 2026-03-07 17:46:50,991 | INFO     | PID=1386341 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 18:47:20] 2026-03-07 17:46:50,991 | INFO     | .. there are 14 such processes running
[2026-03-07 18:47:20] 2026-03-07 17:46:50,992 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 18:47:20] 2026-03-07 17:46:50,992 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 18:47:20] 2026-03-07 17:46:50,992 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 18:47:20] 2026-03-07 17:47:14,962 | INFO     | [monitor] cgroup control has ended
[2026-03-07 18:47:20] 2026-03-07 17:47:15,070 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22446766884672)>', '<ExcThread(monitor, started 22446528018176)>']
[2026-03-07 18:47:20] 2026-03-07 17:47:15,117 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 18:47:20] 2026-03-07 17:47:15,117 | INFO     | [monitor] control thread has ended
[2026-03-07 18:47:20] 2026-03-07 17:47:20,095 | INFO     | all workflow threads have been joined
[2026-03-07 18:47:20] 2026-03-07 17:47:20,096 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 18:47:20] 2026-03-07 17:47:20,096 | INFO     | traces error code: 0
[2026-03-07 18:47:20] 2026-03-07 17:47:20,097 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 18:47:20] 2026-03-07 17:47:20,235 [wrapper] ==== pilot stdout END ====
[2026-03-07 18:47:20] 2026-03-07 17:47:20,247 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 18:47:20] 2026-03-07 17:47:20,277 [wrapper] pilotpid: 1386341
[2026-03-07 18:47:20] 2026-03-07 17:47:20,294 [wrapper] Pilot exit status: 0
[2026-03-07 18:47:20] 2026-03-07 17:47:20,397 [wrapper] pandaids: 7043067130
[2026-03-07 18:47:20] 2026-03-07 17:47:20,486 [wrapper] cleanup supervisor_pilot 1753485 1386342
[2026-03-07 18:47:20] 2026-03-07 17:47:20,490 [wrapper] Test setup, not cleaning
[2026-03-07 18:47:20] 2026-03-07 17:47:20,494 [wrapper] apfmon messages muted
[2026-03-07 18:47:20] 2026-03-07 17:47:20,499 [wrapper] ==== wrapper stdout END ====
[2026-03-07 18:47:20] 2026-03-07 17:47:20,502 [wrapper] ==== wrapper stderr END ====
[2026-03-07 18:47:20]  *** Error codes and diagnostics ***
[2026-03-07 18:47:20]     "exeErrorCode": 0,
[2026-03-07 18:47:20]     "exeErrorDiag": "",
[2026-03-07 18:47:20]     "pilotErrorCode": 0,
[2026-03-07 18:47:20]     "pilotErrorDiag": "",
[2026-03-07 18:47:20]  *** Listing of results directory ***
[2026-03-07 18:47:20] total 411188
[2026-03-07 18:47:20] -rwx------. 1 boinc boinc     36322 Mar  6 12:02 runpilot2-wrapper.sh
[2026-03-07 18:47:20] -rw-r--r--. 1 boinc boinc    584627 Mar  6 12:03 pilot3.tar.gz
[2026-03-07 18:47:20] -rw-r--r--. 1 boinc boinc      5111 Mar  6 12:03 queuedata.json
[2026-03-07 18:47:20] -rw-r--r--. 1 boinc boinc       100 Mar  7 14:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 18:47:20] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 14:45 run_atlas
[2026-03-07 18:47:20] -rw-r--r--. 1 boinc boinc       105 Mar  7 14:45 job.xml
[2026-03-07 18:47:20] -rw-r--r--. 2 boinc boinc 210456130 Mar  7 14:45 EVNT.48966985._000380.pool.root.1
[2026-03-07 18:47:20] -rw-r--r--. 1 boinc boinc      6560 Mar  7 14:45 init_data.xml
[2026-03-07 18:47:20] -rw-r--r--. 2 boinc boinc     15845 Mar  7 14:45 start_atlas.sh
[2026-03-07 18:47:20] drwxrwx--x. 2 boinc boinc      4096 Mar  7 14:45 shared
[2026-03-07 18:47:20] -rw-r--r--. 2 boinc boinc    597962 Mar  7 14:45 input.tar.gz
[2026-03-07 18:47:20] -rw-r--r--. 1 boinc boinc         0 Mar  7 14:45 boinc_lockfile
[2026-03-07 18:47:20] -rw-r--r--. 1 boinc boinc      2590 Mar  7 14:45 pandaJob.out
[2026-03-07 18:47:20] -rw-------. 1 boinc boinc    999177 Mar  7 14:45 agis_schedconf.cvmfs.json
[2026-03-07 18:47:20] -rw-------. 1 boinc boinc       451 Mar  7 14:45 workernode_map.json
[2026-03-07 18:47:20] drwx------. 5 boinc boinc      4096 Mar  7 14:45 pilot3
[2026-03-07 18:47:20] -rw-r--r--. 1 boinc boinc       530 Mar  7 18:45 boinc_task_state.xml
[2026-03-07 18:47:20] -rw-------. 1 boinc boinc 201819199 Mar  7 18:45 HITS.48966988._005763.pool.root.1
[2026-03-07 18:47:20] -rw-------. 1 boinc boinc      1033 Mar  7 18:46 memory_monitor_summary.json
[2026-03-07 18:47:20] -rw-------. 1 boinc boinc   1521291 Mar  7 18:46 agis_ddmendpoints.agis.ALL.json
[2026-03-07 18:47:20] -rw-------. 1 boinc boinc    403767 Mar  7 18:46 log.48966988._005763.job.log.tgz.1
[2026-03-07 18:47:20] -rw-------. 1 boinc boinc      6412 Mar  7 18:46 heartbeat.json
[2026-03-07 18:47:20] -rw-r--r--. 1 boinc boinc        28 Mar  7 18:46 wrapper_checkpoint.txt
[2026-03-07 18:47:20] -rw-r--r--. 1 boinc boinc      8192 Mar  7 18:46 boinc_mmap_file
[2026-03-07 18:47:20] -rw-------. 1 boinc boinc        95 Mar  7 18:46 pilot_heartbeat.json
[2026-03-07 18:47:20] -rw-------. 1 boinc boinc      5247 Mar  7 18:47 pilotlog.txt
[2026-03-07 18:47:20] -rw-------. 1 boinc boinc   2020203 Mar  7 18:47 log.48966988._005763.job.log.1
[2026-03-07 18:47:20] -rw-------. 1 boinc boinc       357 Mar  7 18:47 output.list
[2026-03-07 18:47:20] -rw-r--r--. 1 boinc boinc       620 Mar  7 18:47 runtime_log
[2026-03-07 18:47:20] -rw-------. 1 boinc boinc   2437120 Mar  7 18:47 result.tar.gz
[2026-03-07 18:47:20] -rw-------. 1 boinc boinc       665 Mar  7 18:47 zACODmC8hI9n9Rq4apOajLDm4fhM0noT9bVooX4SDm4PPLDm0dcetm.diag
[2026-03-07 18:47:20] -rw-r--r--. 1 boinc boinc      9205 Mar  7 18:47 runtime_log.err
[2026-03-07 18:47:20] -rw-r--r--. 1 boinc boinc     20857 Mar  7 18:47 stderr.txt
[2026-03-07 18:47:20] HITS file was successfully produced:
[2026-03-07 18:47:20] -rw-------. 1 boinc boinc 201819199 Mar  7 18:45 shared/HITS.pool.root.1
[2026-03-07 18:47:20]  *** Contents of shared directory: ***
[2026-03-07 18:47:20] total 405604
[2026-03-07 18:47:20] -rw-r--r--. 2 boinc boinc 210456130 Mar  7 14:45 ATLAS.root_0
[2026-03-07 18:47:20] -rw-r--r--. 2 boinc boinc     15845 Mar  7 14:45 start_atlas.sh
[2026-03-07 18:47:20] -rw-r--r--. 2 boinc boinc    597962 Mar  7 14:45 input.tar.gz
[2026-03-07 18:47:20] -rw-------. 1 boinc boinc 201819199 Mar  7 18:45 HITS.pool.root.1
[2026-03-07 18:47:20] -rw-------. 1 boinc boinc   2437120 Mar  7 18:47 result.tar.gz
18:47:21 (1382247): run_atlas exited; CPU time 54450.997935
18:47:21 (1382247): called boinc_finish(0)

</stderr_txt>
]]>

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