Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:56:44 (1142887): wrapper (7.7.26015): starting
07:56:44 (1142887): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 07:56:44] Arguments: --nthreads 4
[2026-03-09 07:56:44] Threads: 4
[2026-03-09 07:56:44] Checking for CVMFS
[2026-03-09 07:56:44] No cvmfs_config command found, will try listing directly
[2026-03-09 07:56:44] CVMFS is ok
[2026-03-09 07:56:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 07:56:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 07:56:44] Further information can be found at the LHC@home message board.
[2026-03-09 07:56:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 07:56:44] Checking for apptainer binary...
[2026-03-09 07:56:44] which: no apptainer in ((null))
[2026-03-09 07:56:44] apptainer is not installed, using version from CVMFS
[2026-03-09 07:56:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 07:56:44] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-03-09 07:56:44] apptainer works
[2026-03-09 07:56:44] Set ATHENA_PROC_NUMBER=4
[2026-03-09 07:56:44] Set ATHENA_CORE_NUMBER=4
[2026-03-09 07:56:44] Starting ATLAS job with PandaID=7043051371
[2026-03-09 07:56:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 11:21:36]  *** The last 200 lines of the pilot log: ***
[2026-03-09 11:21:36] 2026-03-09 10:20:52,139 | INFO     | mean y: 2336884.0315789473
[2026-03-09 11:21:36] 2026-03-09 10:20:52,139 | INFO     | intersect: -3012696154.085527
[2026-03-09 11:21:36] 2026-03-09 10:20:52,140 | INFO     | chi2: 0.0015399134191864262
[2026-03-09 11:21:36] 2026-03-09 10:20:52,140 | INFO     | current chi2=0.0015399134191864262 (change=91.08301557676639 %)
[2026-03-09 11:21:36] 2026-03-09 10:20:52,140 | INFO     | sum of square deviations: 1963274020.0
[2026-03-09 11:21:36] 2026-03-09 10:20:52,141 | INFO     | sum of deviations: 2762709336.9999995
[2026-03-09 11:21:36] 2026-03-09 10:20:52,141 | INFO     | mean x: 1773045988.0
[2026-03-09 11:21:36] 2026-03-09 10:20:52,141 | INFO     | mean y: 2337679.4054054054
[2026-03-09 11:21:36] 2026-03-09 10:20:52,141 | INFO     | intersect: -2492683726.7139444
[2026-03-09 11:21:36] 2026-03-09 10:20:52,142 | INFO     | chi2: 0.0011260104620512477
[2026-03-09 11:21:36] 2026-03-09 10:20:52,142 | INFO     | current chi2=0.0011260104620512477 (change=26.87832653304973 %)
[2026-03-09 11:21:36] 2026-03-09 10:20:52,142 | INFO     | sum of square deviations: 1808350185.0
[2026-03-09 11:21:36] 2026-03-09 10:20:52,143 | INFO     | sum of deviations: 2046601422.9999998
[2026-03-09 11:21:36] 2026-03-09 10:20:52,143 | INFO     | mean x: 1773046140.5
[2026-03-09 11:21:36] 2026-03-09 10:20:52,143 | INFO     | mean y: 2338384.4444444445
[2026-03-09 11:21:36] 2026-03-09 10:20:52,143 | INFO     | intersect: -2004307664.6956217
[2026-03-09 11:21:36] 2026-03-09 10:20:52,149 | INFO     | chi2: 0.000801774546871914
[2026-03-09 11:21:36] 2026-03-09 10:20:52,149 | INFO     | current chi2=0.000801774546871914 (change=28.79510680466279 %)
[2026-03-09 11:21:36] 2026-03-09 10:20:52,149 | INFO     | sum of square deviations: 1661798600.0
[2026-03-09 11:21:36] 2026-03-09 10:20:52,150 | INFO     | sum of deviations: 1489833988.0
[2026-03-09 11:21:36] 2026-03-09 10:20:52,150 | INFO     | mean x: 1773046293.0
[2026-03-09 11:21:36] 2026-03-09 10:20:52,151 | INFO     | mean y: 2338963.902857143
[2026-03-09 11:21:36] 2026-03-09 10:20:52,151 | INFO     | intersect: -1587230692.4976277
[2026-03-09 11:21:36] 2026-03-09 10:20:52,151 | INFO     | chi2: 0.0005929355629548719
[2026-03-09 11:21:36] 2026-03-09 10:20:52,151 | INFO     | current chi2=0.0005929355629548719 (change=26.047095749274856 %)
[2026-03-09 11:21:36] 2026-03-09 10:20:52,151 | INFO     | sum of square deviations: 1523386702.5
[2026-03-09 11:21:36] 2026-03-09 10:20:52,152 | INFO     | sum of deviations: 934513808.5000001
[2026-03-09 11:21:36] 2026-03-09 10:20:52,153 | INFO     | mean x: 1773046445.5
[2026-03-09 11:21:36] 2026-03-09 10:20:52,153 | INFO     | mean y: 2339575.911764706
[2026-03-09 11:21:36] 2026-03-09 10:20:52,153 | INFO     | intersect: -1085326729.506569
[2026-03-09 11:21:36] 2026-03-09 10:20:52,153 | INFO     | chi2: 0.000323724418753988
[2026-03-09 11:21:36] 2026-03-09 10:20:52,153 | INFO     | current chi2=0.000323724418753988 (change=45.40310297113575 %)
[2026-03-09 11:21:36] 2026-03-09 10:20:52,153 | INFO     | sum of square deviations: 1392881930.0
[2026-03-09 11:21:36] 2026-03-09 10:20:52,154 | INFO     | sum of deviations: 635728458.0000001
[2026-03-09 11:21:36] 2026-03-09 10:20:52,155 | INFO     | mean x: 1773046598.0
[2026-03-09 11:21:36] 2026-03-09 10:20:52,155 | INFO     | mean y: 2339923.5272727273
[2026-03-09 11:21:36] 2026-03-09 10:20:52,155 | INFO     | intersect: -806900368.4396753
[2026-03-09 11:21:36] 2026-03-09 10:20:52,155 | INFO     | chi2: 0.00023255334804230795
[2026-03-09 11:21:36] 2026-03-09 10:20:52,155 | INFO     | current chi2=0.00023255334804230795 (change=28.163173807708592 %)
[2026-03-09 11:21:36] 2026-03-09 10:20:52,155 | INFO     | sum of square deviations: 1270051720.0
[2026-03-09 11:21:36] 2026-03-09 10:20:52,156 | INFO     | sum of deviations: 396619346.5
[2026-03-09 11:21:36] 2026-03-09 10:20:52,156 | INFO     | mean x: 1773046750.5
[2026-03-09 11:21:36] 2026-03-09 10:20:52,156 | INFO     | mean y: 2340220.49375
[2026-03-09 11:21:36] 2026-03-09 10:20:52,157 | INFO     | intersect: -551357422.2268618
[2026-03-09 11:21:36] 2026-03-09 10:20:52,157 | INFO     | chi2: 0.00017768655323738177
[2026-03-09 11:21:36] 2026-03-09 10:20:52,157 | INFO     | current chi2=0.00017768655323738177 (change=23.593207866843688 %)
[2026-03-09 11:21:36] 2026-03-09 10:20:52,157 | INFO     | left removable region: 80
[2026-03-09 11:21:36] 2026-03-09 10:20:52,157 | INFO     | sum of square deviations: 459366752.5
[2026-03-09 11:21:36] 2026-03-09 10:20:52,158 | INFO     | sum of deviations: -4816590.5
[2026-03-09 11:21:36] 2026-03-09 10:20:52,158 | INFO     | mean x: 1773047787.5
[2026-03-09 11:21:36] 2026-03-09 10:20:52,158 | INFO     | mean y: 2340742.9210526315
[2026-03-09 11:21:36] 2026-03-09 10:20:52,158 | INFO     | intersect: 20931651.12858234
[2026-03-09 11:21:36] 2026-03-09 10:20:52,158 | INFO     | chi2: 9.754835570677099e-07
[2026-03-09 11:21:36] 2026-03-09 10:20:52,159 | INFO     | current memory leak: -0.01 B/s (using 114 data points, chi2=0.00)
[2026-03-09 11:21:36] 2026-03-09 10:20:52,159 | INFO     | could have reported an average CPU frequency of 2656 MHz (10 samples)
[2026-03-09 11:21:36] 2026-03-09 10:20:52,159 | INFO     | ..............................
[2026-03-09 11:21:36] 2026-03-09 10:20:52,159 | INFO     | . Timing measurements:
[2026-03-09 11:21:36] 2026-03-09 10:20:52,159 | INFO     | . get job = 0 s
[2026-03-09 11:21:36] 2026-03-09 10:20:52,159 | INFO     | . initial setup = 9 s
[2026-03-09 11:21:36] 2026-03-09 10:20:52,159 | INFO     | . payload setup = 10 s
[2026-03-09 11:21:36] 2026-03-09 10:20:52,160 | INFO     | . stage-in = 0 s
[2026-03-09 11:21:36] 2026-03-09 10:20:52,160 | INFO     | . payload execution = 12191 s
[2026-03-09 11:21:36] 2026-03-09 10:20:52,160 | INFO     | . stage-out = 1 s
[2026-03-09 11:21:36] 2026-03-09 10:20:52,160 | INFO     | . log creation = 0 s
[2026-03-09 11:21:36] 2026-03-09 10:20:52,160 | INFO     | ..............................
[2026-03-09 11:21:36] 2026-03-09 10:20:52,265 | INFO     | 
[2026-03-09 11:21:36] 2026-03-09 10:20:52,266 | INFO     | job summary report
[2026-03-09 11:21:36] 2026-03-09 10:20:52,266 | INFO     | --------------------------------------------------
[2026-03-09 11:21:36] 2026-03-09 10:20:52,266 | INFO     | PanDA job id: 7043051371
[2026-03-09 11:21:36] 2026-03-09 10:20:52,266 | INFO     | task id: 48966988
[2026-03-09 11:21:36] 2026-03-09 10:20:52,266 | INFO     | errors: (none)
[2026-03-09 11:21:36] 2026-03-09 10:20:52,266 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 11:21:36] 2026-03-09 10:20:52,266 | INFO     | pilot state: finished 
[2026-03-09 11:21:36] 2026-03-09 10:20:52,266 | INFO     | transexitcode: 0
[2026-03-09 11:21:36] 2026-03-09 10:20:52,266 | INFO     | exeerrorcode: 0
[2026-03-09 11:21:36] 2026-03-09 10:20:52,267 | INFO     | exeerrordiag: 
[2026-03-09 11:21:36] 2026-03-09 10:20:52,267 | INFO     | exitcode: 0
[2026-03-09 11:21:36] 2026-03-09 10:20:52,267 | INFO     | exitmsg: OK
[2026-03-09 11:21:36] 2026-03-09 10:20:52,267 | INFO     | cpuconsumptiontime: 45235 s
[2026-03-09 11:21:36] 2026-03-09 10:20:52,267 | INFO     | nevents: 400
[2026-03-09 11:21:36] 2026-03-09 10:20:52,267 | INFO     | neventsw: 0
[2026-03-09 11:21:36] 2026-03-09 10:20:52,267 | INFO     | pid: 1159205
[2026-03-09 11:21:36] 2026-03-09 10:20:52,267 | INFO     | pgrp: 1159205
[2026-03-09 11:21:36] 2026-03-09 10:20:52,267 | INFO     | corecount: 4
[2026-03-09 11:21:36] 2026-03-09 10:20:52,267 | INFO     | event service: False
[2026-03-09 11:21:36] 2026-03-09 10:20:52,267 | INFO     | sizes: {0: 2279846, 1: 2280307, 11: 2280307, 12206: 2310320, 12208: 2319342, 12210: 2319398, 12211: 2319720}
[2026-03-09 11:21:36] 2026-03-09 10:20:52,267 | INFO     | --------------------------------------------------
[2026-03-09 11:21:36] 2026-03-09 10:20:52,268 | INFO     | 
[2026-03-09 11:21:36] 2026-03-09 10:20:52,268 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot100/slots/0
[2026-03-09 11:21:36] 2026-03-09 10:20:52,299 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 11:21:36] 2026-03-09 10:20:52,299 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 11:21:36] 2026-03-09 10:20:52,299 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 11:21:36] 2026-03-09 10:20:52,299 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 11:21:36] 2026-03-09 10:20:52,299 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 11:21:36] 2026-03-09 10:20:52,299 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 11:21:36] 2026-03-09 10:20:52,299 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 11:21:36] 2026-03-09 10:20:52,299 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 11:21:36] 2026-03-09 10:20:52,300 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 11:21:36] 2026-03-09 10:20:52,300 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 11:21:36] 2026-03-09 10:20:52,300 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 11:21:36] 2026-03-09 10:20:52,300 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 11:21:36] 2026-03-09 10:20:52,300 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 11:21:36] 2026-03-09 10:20:52,300 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 11:21:36] 2026-03-09 10:20:52,300 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 11:21:36] 2026-03-09 10:20:52,300 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 11:21:36] 2026-03-09 10:20:52,300 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 11:21:36] 2026-03-09 10:20:52,300 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 11:21:36] 2026-03-09 10:20:52,300 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 11:21:36] 2026-03-09 10:20:52,301 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 11:21:36] 2026-03-09 10:20:52,301 | INFO     | job 7043051371 has completed (purged errors)
[2026-03-09 11:21:36] 2026-03-09 10:20:52,301 | INFO     | overall cleanup function is called
[2026-03-09 11:21:36] 2026-03-09 10:20:53,310 | INFO     | --- collectZombieJob: --- 10, [1159205]
[2026-03-09 11:21:36] 2026-03-09 10:20:53,310 | INFO     | zombie collector waiting for pid 1159205
[2026-03-09 11:21:36] 2026-03-09 10:20:53,310 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 11:21:36] 2026-03-09 10:20:53,310 | INFO     | collected zombie processes
[2026-03-09 11:21:36] 2026-03-09 10:20:53,310 | INFO     | will attempt to kill all subprocesses of pid=1159205
[2026-03-09 11:21:36] 2026-03-09 10:20:54,182 | INFO     | process IDs to be killed: [1159205] (in reverse order)
[2026-03-09 11:21:36] 2026-03-09 10:20:54,609 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 11:21:36] 2026-03-09 10:20:54,609 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 11:21:36] 2026-03-09 10:20:54,641 | INFO     | did not find any defunct processes belonging to 1159205
[2026-03-09 11:21:36] 2026-03-09 10:20:54,670 | INFO     | did not find any defunct processes belonging to 1159205
[2026-03-09 11:21:36] 2026-03-09 10:20:54,670 | INFO     | ready for new job
[2026-03-09 11:21:36] 2026-03-09 10:20:54,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 11:21:36] 2026-03-09 10:20:54,672 | INFO     | **************************************
[2026-03-09 11:21:36] 2026-03-09 10:20:54,673 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 11:21:36] 2026-03-09 10:20:54,673 | INFO     | **************************************
[2026-03-09 11:21:36] 2026-03-09 10:20:54,673 | INFO     | 
[2026-03-09 11:21:36] 2026-03-09 10:20:54,681 | INFO     | architecture information:
[2026-03-09 11:21:36] 2026-03-09 10:20:54,681 | INFO     | executing command: cat /etc/os-release
[2026-03-09 11:21:36] 2026-03-09 10:20:54,709 | INFO     | cat /etc/os-release:
[2026-03-09 11:21:36] NAME="CentOS Linux"
[2026-03-09 11:21:36] VERSION="7 (Core)"
[2026-03-09 11:21:36] ID="centos"
[2026-03-09 11:21:36] ID_LIKE="rhel fedora"
[2026-03-09 11:21:36] VERSION_ID="7"
[2026-03-09 11:21:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 11:21:36] ANSI_COLOR="0;31"
[2026-03-09 11:21:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 11:21:36] HOME_URL="https://www.centos.org/"
[2026-03-09 11:21:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 11:21:36] 
[2026-03-09 11:21:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 11:21:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 11:21:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 11:21:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 11:21:36] 
[2026-03-09 11:21:36] 2026-03-09 10:20:54,709 | INFO     | **************************************
[2026-03-09 11:21:36] 2026-03-09 10:20:55,212 | INFO     | executing command: df -mP /var/lib/boinc/var/slot100/slots/0
[2026-03-09 11:21:36] 2026-03-09 10:20:55,237 | INFO     | sufficient remaining disk space (54858350592 B)
[2026-03-09 11:21:36] 2026-03-09 10:20:55,238 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 11:21:36] 2026-03-09 10:20:55,238 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 11:21:36] 2026-03-09 10:20:55,238 | INFO     | update_server=False
[2026-03-09 11:21:36] 2026-03-09 10:20:55,238 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 11:21:36] 2026-03-09 10:20:55,238 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 11:21:36] 2026-03-09 10:20:55,673 | INFO     | all data control threads have been joined
[2026-03-09 11:21:36] 2026-03-09 10:20:55,968 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 11:21:36] 2026-03-09 10:20:55,968 | INFO     | aborting loop
[2026-03-09 11:21:36] 2026-03-09 10:20:56,243 | INFO     | [job] retrieve thread has finished
[2026-03-09 11:21:36] 2026-03-09 10:20:56,424 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 11:21:36] 2026-03-09 10:20:56,538 | INFO     | all payload control threads have been joined
[2026-03-09 11:21:36] 2026-03-09 10:20:56,542 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 11:21:36] 2026-03-09 10:20:56,640 | INFO     | [payload] failed_post thread has finished
[2026-03-09 11:21:36] 2026-03-09 10:20:56,678 | INFO     | [data] control thread has finished
[2026-03-09 11:21:36] 2026-03-09 10:20:56,826 | INFO     | all job control threads have been joined
[2026-03-09 11:21:36] 2026-03-09 10:20:56,876 | INFO     | [job] validate thread has finished
[2026-03-09 11:21:36] 2026-03-09 10:20:56,973 | INFO     | [job] job monitor thread has finished
[2026-03-09 11:21:36] 2026-03-09 10:20:57,121 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 11:21:36] 2026-03-09 10:20:57,237 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 11:21:36] 2026-03-09 10:20:57,238 | INFO     | [payload] validate_post thread has finished
[2026-03-09 11:21:36] 2026-03-09 10:20:57,244 | INFO     | [data] copytool_out thread has finished
[2026-03-09 11:21:36] 2026-03-09 10:20:57,275 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 11:21:36] 2026-03-09 10:20:57,300 | INFO     | [data] copytool_in thread has finished
[2026-03-09 11:21:36] 2026-03-09 10:20:57,315 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 11:21:36] 2026-03-09 10:20:57,543 | INFO     | [payload] control thread has finished
[2026-03-09 11:21:36] 2026-03-09 10:20:57,831 | INFO     | [job] control thread has finished
[2026-03-09 11:21:36] 2026-03-09 10:20:58,280 | INFO     | [job] queue monitor thread has finished
[2026-03-09 11:21:36] 2026-03-09 10:21:01,320 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 11:21:36] 2026-03-09 10:21:24,907 | INFO     | PID=1147316 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 11:21:36] 2026-03-09 10:21:24,909 | INFO     | .. there are 26 such processes running
[2026-03-09 11:21:36] 2026-03-09 10:21:24,910 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 11:21:36] 2026-03-09 10:21:24,910 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 11:21:36] 2026-03-09 10:21:24,910 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 11:21:36] 2026-03-09 10:21:29,920 | INFO     | [monitor] cgroup control has ended
[2026-03-09 11:21:36] 2026-03-09 10:21:30,575 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22616272955200)>', '<ExcThread(monitor, started 22616030320384)>']
[2026-03-09 11:21:36] 2026-03-09 10:21:30,940 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 11:21:36] 2026-03-09 10:21:30,940 | INFO     | [monitor] control thread has ended
[2026-03-09 11:21:36] 2026-03-09 10:21:35,600 | INFO     | all workflow threads have been joined
[2026-03-09 11:21:36] 2026-03-09 10:21:35,600 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 11:21:36] 2026-03-09 10:21:35,600 | INFO     | traces error code: 0
[2026-03-09 11:21:36] 2026-03-09 10:21:35,600 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 11:21:36] 2026-03-09 10:21:35,776 [wrapper] ==== pilot stdout END ====
[2026-03-09 11:21:36] 2026-03-09 10:21:35,783 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 11:21:36] 2026-03-09 10:21:35,787 [wrapper] pilotpid: 1147316
[2026-03-09 11:21:36] 2026-03-09 10:21:35,790 [wrapper] Pilot exit status: 0
[2026-03-09 11:21:36] 2026-03-09 10:21:35,809 [wrapper] pandaids: 7043051371
[2026-03-09 11:21:36] 2026-03-09 10:21:36,012 [wrapper] cleanup supervisor_pilot 1614404 1147317
[2026-03-09 11:21:36] 2026-03-09 10:21:36,016 [wrapper] Test setup, not cleaning
[2026-03-09 11:21:36] 2026-03-09 10:21:36,020 [wrapper] apfmon messages muted
[2026-03-09 11:21:36] 2026-03-09 10:21:36,024 [wrapper] ==== wrapper stdout END ====
[2026-03-09 11:21:36] 2026-03-09 10:21:36,028 [wrapper] ==== wrapper stderr END ====
[2026-03-09 11:21:36]  *** Error codes and diagnostics ***
[2026-03-09 11:21:36]     "exeErrorCode": 0,
[2026-03-09 11:21:36]     "exeErrorDiag": "",
[2026-03-09 11:21:36]     "pilotErrorCode": 0,
[2026-03-09 11:21:36]     "pilotErrorDiag": "",
[2026-03-09 11:21:36]  *** Listing of results directory ***
[2026-03-09 11:21:36] total 407728
[2026-03-09 11:21:36] -rw-r--r--. 1 boinc boinc    584627 Mar  6 10:22 pilot3.tar.gz
[2026-03-09 11:21:36] -rwx------. 1 boinc boinc     36322 Mar  6 10:24 runpilot2-wrapper.sh
[2026-03-09 11:21:36] -rw-r--r--. 1 boinc boinc      5111 Mar  6 10:24 queuedata.json
[2026-03-09 11:21:36] -rw-r--r--. 1 boinc boinc       100 Mar  9 07:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 11:21:36] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 07:56 run_atlas
[2026-03-09 11:21:36] -rw-r--r--. 1 boinc boinc       105 Mar  9 07:56 job.xml
[2026-03-09 11:21:36] -rw-r--r--. 2 boinc boinc 214927884 Mar  9 07:56 EVNT.48966985._000303.pool.root.1
[2026-03-09 11:21:36] -rw-r--r--. 1 boinc boinc      6620 Mar  9 07:56 init_data.xml
[2026-03-09 11:21:36] -rw-r--r--. 2 boinc boinc     15845 Mar  9 07:56 start_atlas.sh
[2026-03-09 11:21:36] drwxrwx--x. 2 boinc boinc      4096 Mar  9 07:56 shared
[2026-03-09 11:21:36] -rw-r--r--. 2 boinc boinc    597969 Mar  9 07:56 input.tar.gz
[2026-03-09 11:21:36] -rw-r--r--. 1 boinc boinc         0 Mar  9 07:56 boinc_lockfile
[2026-03-09 11:21:36] -rw-r--r--. 1 boinc boinc      2590 Mar  9 07:56 pandaJob.out
[2026-03-09 11:21:36] -rw-------. 1 boinc boinc    999108 Mar  9 07:57 agis_schedconf.cvmfs.json
[2026-03-09 11:21:36] -rw-------. 1 boinc boinc       444 Mar  9 07:57 workernode_map.json
[2026-03-09 11:21:36] drwx------. 5 boinc boinc      4096 Mar  9 07:57 pilot3
[2026-03-09 11:21:36] -rw-------. 1 boinc boinc 194589333 Mar  9 11:20 HITS.48966988._005060.pool.root.1
[2026-03-09 11:21:36] -rw-r--r--. 1 boinc boinc       531 Mar  9 11:20 boinc_task_state.xml
[2026-03-09 11:21:36] -rw-------. 1 boinc boinc        95 Mar  9 11:20 pilot_heartbeat.json
[2026-03-09 11:21:36] -rw-------. 1 boinc boinc      1027 Mar  9 11:20 memory_monitor_summary.json
[2026-03-09 11:21:36] -rw-------. 1 boinc boinc   1511578 Mar  9 11:20 agis_ddmendpoints.agis.ALL.json
[2026-03-09 11:21:36] -rw-------. 1 boinc boinc    365942 Mar  9 11:20 log.48966988._005060.job.log.tgz.1
[2026-03-09 11:21:36] -rw-------. 1 boinc boinc      6349 Mar  9 11:20 heartbeat.json
[2026-03-09 11:21:36] -rw-r--r--. 1 boinc boinc      8192 Mar  9 11:21 boinc_mmap_file
[2026-03-09 11:21:36] -rw-r--r--. 1 boinc boinc        28 Mar  9 11:21 wrapper_checkpoint.txt
[2026-03-09 11:21:36] -rw-------. 1 boinc boinc      4830 Mar  9 11:21 pilotlog.txt
[2026-03-09 11:21:36] -rw-------. 1 boinc boinc   1668135 Mar  9 11:21 log.48966988._005060.job.log.1
[2026-03-09 11:21:36] -rw-------. 1 boinc boinc       357 Mar  9 11:21 output.list
[2026-03-09 11:21:36] -rw-r--r--. 1 boinc boinc       620 Mar  9 11:21 runtime_log
[2026-03-09 11:21:36] -rw-------. 1 boinc boinc   2048000 Mar  9 11:21 result.tar.gz
[2026-03-09 11:21:36] -rw-r--r--. 1 boinc boinc      9222 Mar  9 11:21 runtime_log.err
[2026-03-09 11:21:36] -rw-------. 1 boinc boinc       666 Mar  9 11:21 9ulMDmqagI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmxMRLDmNW7sLn.diag
[2026-03-09 11:21:36] -rw-r--r--. 1 boinc boinc     20737 Mar  9 11:21 stderr.txt
[2026-03-09 11:21:36] HITS file was successfully produced:
[2026-03-09 11:21:36] -rw-------. 1 boinc boinc 194589333 Mar  9 11:20 shared/HITS.pool.root.1
[2026-03-09 11:21:36]  *** Contents of shared directory: ***
[2026-03-09 11:21:36] total 402532
[2026-03-09 11:21:36] -rw-r--r--. 2 boinc boinc 214927884 Mar  9 07:56 ATLAS.root_0
[2026-03-09 11:21:36] -rw-r--r--. 2 boinc boinc     15845 Mar  9 07:56 start_atlas.sh
[2026-03-09 11:21:36] -rw-r--r--. 2 boinc boinc    597969 Mar  9 07:56 input.tar.gz
[2026-03-09 11:21:36] -rw-------. 1 boinc boinc 194589333 Mar  9 11:20 HITS.pool.root.1
[2026-03-09 11:21:36] -rw-------. 1 boinc boinc   2048000 Mar  9 11:21 result.tar.gz
11:21:37 (1142887): run_atlas exited; CPU time 46000.862874
11:21:37 (1142887): called boinc_finish(0)

</stderr_txt>
]]>

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