Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:25:53 (1484492): wrapper (7.7.26015): starting
13:25:53 (1484492): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 13:25:53] Arguments: --nthreads 4
[2026-03-07 13:25:53] Threads: 4
[2026-03-07 13:25:53] Checking for CVMFS
[2026-03-07 13:25:53] No cvmfs_config command found, will try listing directly
[2026-03-07 13:25:53] CVMFS is ok
[2026-03-07 13:25:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 13:25:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 13:25:53] Further information can be found at the LHC@home message board.
[2026-03-07 13:25:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 13:25:53] Checking for apptainer binary...
[2026-03-07 13:25:53] which: no apptainer in ((null))
[2026-03-07 13:25:53] apptainer is not installed, using version from CVMFS
[2026-03-07 13:25:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 13:25:53] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-03-07 13:25:53] apptainer works
[2026-03-07 13:25:53] Set ATHENA_PROC_NUMBER=4
[2026-03-07 13:25:53] Set ATHENA_CORE_NUMBER=4
[2026-03-07 13:25:53] Starting ATLAS job with PandaID=7043122726
[2026-03-07 13:25:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 16:59:33]  *** The last 200 lines of the pilot log: ***
[2026-03-07 16:59:33] 2026-03-07 15:58:30,230 | INFO     | total number of processed events: 400 (read)
[2026-03-07 16:59:33] 2026-03-07 15:58:30,241 | INFO     | using path: /var/lib/boinc/var/slot32/slots/0/PanDA_Pilot-7043122726/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 16:59:33] 2026-03-07 15:58:30,241 | INFO     | extracted standard info from prmon json
[2026-03-07 16:59:33] 2026-03-07 15:58:30,242 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 16:59:33] 2026-03-07 15:58:30,242 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 16:59:33] 2026-03-07 15:58:30,242 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 16:59:33] 2026-03-07 15:58:30,242 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 16:59:33] 2026-03-07 15:58:30,246 | INFO     | fitting pss+swap vs Time
[2026-03-07 16:59:33] 2026-03-07 15:58:30,246 | INFO     | sum of square deviations: 2830787960.0
[2026-03-07 16:59:33] 2026-03-07 15:58:30,247 | INFO     | sum of deviations: 21626468775.0
[2026-03-07 16:59:33] 2026-03-07 15:58:30,248 | INFO     | mean x: 1772892734.0
[2026-03-07 16:59:33] 2026-03-07 15:58:30,248 | INFO     | mean y: 2293979.04784689
[2026-03-07 16:59:33] 2026-03-07 15:58:30,248 | INFO     | intersect: -13542136015.375113
[2026-03-07 16:59:33] 2026-03-07 15:58:30,248 | INFO     | chi2: 2.187277301814678
[2026-03-07 16:59:33] 2026-03-07 15:58:30,248 | INFO     | sum of square deviations: 2632440055.0
[2026-03-07 16:59:33] 2026-03-07 15:58:30,250 | INFO     | sum of deviations: 34018057727.500004
[2026-03-07 16:59:33] 2026-03-07 15:58:30,250 | INFO     | mean x: 1772892581.5
[2026-03-07 16:59:33] 2026-03-07 15:58:30,250 | INFO     | mean y: 2303309.848039216
[2026-03-07 16:59:33] 2026-03-07 15:58:30,250 | INFO     | intersect: -22908137544.28321
[2026-03-07 16:59:33] 2026-03-07 15:58:30,250 | INFO     | chi2: 1.3744231781509877
[2026-03-07 16:59:33] 2026-03-07 15:58:30,250 | INFO     | current chi2=1.3744231781509877 (change=37.16282901072053 %)
[2026-03-07 16:59:33] 2026-03-07 15:58:30,251 | INFO     | sum of square deviations: 2443580700.0
[2026-03-07 16:59:33] 2026-03-07 15:58:30,252 | INFO     | sum of deviations: 33029039016.0
[2026-03-07 16:59:33] 2026-03-07 15:58:30,252 | INFO     | mean x: 1772892429.0
[2026-03-07 16:59:33] 2026-03-07 15:58:30,252 | INFO     | mean y: 2302511.110552764
[2026-03-07 16:59:33] 2026-03-07 15:58:30,252 | INFO     | intersect: -23961274058.557068
[2026-03-07 16:59:33] 2026-03-07 15:58:30,252 | INFO     | chi2: 1.3748425200803698
[2026-03-07 16:59:33] 2026-03-07 15:58:30,253 | INFO     | current chi2=1.3748425200803698 (change=-0.03051039418196001 %)
[2026-03-07 16:59:33] 2026-03-07 15:58:30,253 | INFO     | right removable region: 198
[2026-03-07 16:59:33] 2026-03-07 15:58:30,253 | INFO     | sum of square deviations: 2632440055.0
[2026-03-07 16:59:33] 2026-03-07 15:58:30,254 | INFO     | sum of deviations: -6804044889.499999
[2026-03-07 16:59:33] 2026-03-07 15:58:30,254 | INFO     | mean x: 1772892886.5
[2026-03-07 16:59:33] 2026-03-07 15:58:30,254 | INFO     | mean y: 2315594.9852941176
[2026-03-07 16:59:33] 2026-03-07 15:58:30,254 | INFO     | intersect: 4584696402.1415
[2026-03-07 16:59:33] 2026-03-07 15:58:30,255 | INFO     | chi2: 0.8338933071801793
[2026-03-07 16:59:33] 2026-03-07 15:58:30,255 | INFO     | current chi2=0.8338933071801793 (change=61.87528181779519 %)
[2026-03-07 16:59:33] 2026-03-07 15:58:30,255 | INFO     | sum of square deviations: 2443580700.0
[2026-03-07 16:59:33] 2026-03-07 15:58:30,256 | INFO     | sum of deviations: -7332140463.999999
[2026-03-07 16:59:33] 2026-03-07 15:58:30,256 | INFO     | mean x: 1772893039.0
[2026-03-07 16:59:33] 2026-03-07 15:58:30,256 | INFO     | mean y: 2316026.2613065327
[2026-03-07 16:59:33] 2026-03-07 15:58:30,257 | INFO     | intersect: 5322009699.400822
[2026-03-07 16:59:33] 2026-03-07 15:58:30,257 | INFO     | chi2: 0.833537733654366
[2026-03-07 16:59:33] 2026-03-07 15:58:30,257 | INFO     | current chi2=0.833537733654366 (change=0.04264017024140127 %)
[2026-03-07 16:59:33] 2026-03-07 15:58:30,257 | INFO     | left removable region: 20
[2026-03-07 16:59:33] 2026-03-07 15:58:30,257 | INFO     | sum of square deviations: 1748737904.5
[2026-03-07 16:59:33] 2026-03-07 15:58:30,258 | INFO     | sum of deviations: 2982284204.999999
[2026-03-07 16:59:33] 2026-03-07 15:58:30,258 | INFO     | mean x: 1772893008.5
[2026-03-07 16:59:33] 2026-03-07 15:58:30,258 | INFO     | mean y: 2327936.033707865
[2026-03-07 16:59:33] 2026-03-07 15:58:30,259 | INFO     | intersect: -3021150197.995884
[2026-03-07 16:59:33] 2026-03-07 15:58:30,259 | INFO     | chi2: 0.00038323052718615056
[2026-03-07 16:59:33] 2026-03-07 15:58:30,259 | INFO     | current memory leak: 1.71 B/s (using 178 data points, chi2=0.00)
[2026-03-07 16:59:33] 2026-03-07 15:58:30,260 | INFO     | could have reported an average CPU frequency of 2550 MHz (11 samples)
[2026-03-07 16:59:33] 2026-03-07 15:58:30,260 | INFO     | ..............................
[2026-03-07 16:59:33] 2026-03-07 15:58:30,260 | INFO     | . Timing measurements:
[2026-03-07 16:59:33] 2026-03-07 15:58:30,260 | INFO     | . get job = 0 s
[2026-03-07 16:59:33] 2026-03-07 15:58:30,260 | INFO     | . initial setup = 5 s
[2026-03-07 16:59:33] 2026-03-07 15:58:30,260 | INFO     | . payload setup = 6 s
[2026-03-07 16:59:33] 2026-03-07 15:58:30,260 | INFO     | . stage-in = 0 s
[2026-03-07 16:59:33] 2026-03-07 15:58:30,260 | INFO     | . payload execution = 12714 s
[2026-03-07 16:59:33] 2026-03-07 15:58:30,260 | INFO     | . stage-out = 1 s
[2026-03-07 16:59:33] 2026-03-07 15:58:30,260 | INFO     | . log creation = 0 s
[2026-03-07 16:59:33] 2026-03-07 15:58:30,260 | INFO     | ..............................
[2026-03-07 16:59:33] 2026-03-07 15:58:30,350 | INFO     | 
[2026-03-07 16:59:33] 2026-03-07 15:58:30,351 | INFO     | job summary report
[2026-03-07 16:59:33] 2026-03-07 15:58:30,351 | INFO     | --------------------------------------------------
[2026-03-07 16:59:33] 2026-03-07 15:58:30,351 | INFO     | PanDA job id: 7043122726
[2026-03-07 16:59:33] 2026-03-07 15:58:30,351 | INFO     | task id: 48967030
[2026-03-07 16:59:33] 2026-03-07 15:58:30,351 | INFO     | errors: (none)
[2026-03-07 16:59:33] 2026-03-07 15:58:30,351 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 16:59:33] 2026-03-07 15:58:30,351 | INFO     | pilot state: finished 
[2026-03-07 16:59:33] 2026-03-07 15:58:30,351 | INFO     | transexitcode: 0
[2026-03-07 16:59:33] 2026-03-07 15:58:30,351 | INFO     | exeerrorcode: 0
[2026-03-07 16:59:33] 2026-03-07 15:58:30,351 | INFO     | exeerrordiag: 
[2026-03-07 16:59:33] 2026-03-07 15:58:30,351 | INFO     | exitcode: 0
[2026-03-07 16:59:33] 2026-03-07 15:58:30,352 | INFO     | exitmsg: OK
[2026-03-07 16:59:33] 2026-03-07 15:58:30,352 | INFO     | cpuconsumptiontime: 48531 s
[2026-03-07 16:59:33] 2026-03-07 15:58:30,352 | INFO     | nevents: 400
[2026-03-07 16:59:33] 2026-03-07 15:58:30,352 | INFO     | neventsw: 0
[2026-03-07 16:59:33] 2026-03-07 15:58:30,352 | INFO     | pid: 1493428
[2026-03-07 16:59:33] 2026-03-07 15:58:30,352 | INFO     | pgrp: 1493428
[2026-03-07 16:59:33] 2026-03-07 15:58:30,352 | INFO     | corecount: 4
[2026-03-07 16:59:33] 2026-03-07 15:58:30,352 | INFO     | event service: False
[2026-03-07 16:59:33] 2026-03-07 15:58:30,352 | INFO     | sizes: {0: 2295446, 1: 2295850, 11: 2295850, 12724: 2325932, 12725: 2325931, 12726: 2335007, 12728: 2335191, 12731: 2335385}
[2026-03-07 16:59:33] 2026-03-07 15:58:30,352 | INFO     | --------------------------------------------------
[2026-03-07 16:59:33] 2026-03-07 15:58:30,352 | INFO     | 
[2026-03-07 16:59:33] 2026-03-07 15:58:30,353 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/0
[2026-03-07 16:59:33] 2026-03-07 15:58:30,373 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 16:59:33] 2026-03-07 15:58:30,373 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 16:59:33] 2026-03-07 15:58:30,373 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 16:59:33] 2026-03-07 15:58:30,373 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 16:59:33] 2026-03-07 15:58:30,374 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 16:59:33] 2026-03-07 15:58:30,374 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 16:59:33] 2026-03-07 15:58:30,374 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 16:59:33] 2026-03-07 15:58:30,374 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 16:59:33] 2026-03-07 15:58:30,374 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 16:59:33] 2026-03-07 15:58:30,374 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 16:59:33] 2026-03-07 15:58:30,374 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 16:59:33] 2026-03-07 15:58:30,374 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 16:59:33] 2026-03-07 15:58:30,374 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 16:59:33] 2026-03-07 15:58:30,374 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 16:59:33] 2026-03-07 15:58:30,374 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 16:59:33] 2026-03-07 15:58:30,375 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 16:59:33] 2026-03-07 15:58:30,375 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 16:59:33] 2026-03-07 15:58:30,375 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 16:59:33] 2026-03-07 15:58:30,375 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 16:59:33] 2026-03-07 15:58:30,375 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 16:59:33] 2026-03-07 15:58:30,375 | INFO     | job 7043122726 has completed (purged errors)
[2026-03-07 16:59:33] 2026-03-07 15:58:30,375 | INFO     | overall cleanup function is called
[2026-03-07 16:59:33] 2026-03-07 15:58:31,383 | INFO     | --- collectZombieJob: --- 10, [1493428]
[2026-03-07 16:59:33] 2026-03-07 15:58:31,384 | INFO     | zombie collector waiting for pid 1493428
[2026-03-07 16:59:33] 2026-03-07 15:58:31,384 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 16:59:33] 2026-03-07 15:58:31,384 | INFO     | collected zombie processes
[2026-03-07 16:59:33] 2026-03-07 15:58:31,384 | INFO     | will attempt to kill all subprocesses of pid=1493428
[2026-03-07 16:59:33] 2026-03-07 15:58:31,748 | INFO     | process IDs to be killed: [1493428] (in reverse order)
[2026-03-07 16:59:33] 2026-03-07 15:58:31,845 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 16:59:33] 2026-03-07 15:58:31,845 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 16:59:33] 2026-03-07 15:58:31,859 | INFO     | did not find any defunct processes belonging to 1493428
[2026-03-07 16:59:33] 2026-03-07 15:58:31,871 | INFO     | did not find any defunct processes belonging to 1493428
[2026-03-07 16:59:33] 2026-03-07 15:58:31,871 | INFO     | ready for new job
[2026-03-07 16:59:33] 2026-03-07 15:58:31,871 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 16:59:33] 2026-03-07 15:58:31,874 | INFO     | **************************************
[2026-03-07 16:59:33] 2026-03-07 15:58:31,874 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 16:59:33] 2026-03-07 15:58:31,874 | INFO     | **************************************
[2026-03-07 16:59:33] 2026-03-07 15:58:31,874 | INFO     | 
[2026-03-07 16:59:33] 2026-03-07 15:58:31,878 | INFO     | architecture information:
[2026-03-07 16:59:33] 2026-03-07 15:58:31,878 | INFO     | executing command: cat /etc/os-release
[2026-03-07 16:59:33] 2026-03-07 15:58:31,894 | INFO     | cat /etc/os-release:
[2026-03-07 16:59:33] NAME="CentOS Linux"
[2026-03-07 16:59:33] VERSION="7 (Core)"
[2026-03-07 16:59:33] ID="centos"
[2026-03-07 16:59:33] ID_LIKE="rhel fedora"
[2026-03-07 16:59:33] VERSION_ID="7"
[2026-03-07 16:59:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 16:59:33] ANSI_COLOR="0;31"
[2026-03-07 16:59:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 16:59:33] HOME_URL="https://www.centos.org/"
[2026-03-07 16:59:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 16:59:33] 
[2026-03-07 16:59:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 16:59:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 16:59:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 16:59:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 16:59:33] 
[2026-03-07 16:59:33] 2026-03-07 15:58:31,894 | INFO     | **************************************
[2026-03-07 16:59:33] 2026-03-07 15:58:32,397 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/0
[2026-03-07 16:59:33] 2026-03-07 15:58:32,422 | INFO     | sufficient remaining disk space (21173895168 B)
[2026-03-07 16:59:33] 2026-03-07 15:58:32,422 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 16:59:33] 2026-03-07 15:58:32,423 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 16:59:33] 2026-03-07 15:58:32,423 | INFO     | update_server=False
[2026-03-07 16:59:33] 2026-03-07 15:58:32,423 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 16:59:33] 2026-03-07 15:58:32,489 | INFO     | all payload control threads have been joined
[2026-03-07 16:59:33] 2026-03-07 15:58:32,532 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-07 16:59:33] 2026-03-07 15:58:32,533 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-07 16:59:33] 2026-03-07 15:58:32,533 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 16:59:33] 2026-03-07 15:58:32,533 | INFO     | will abort loop
[2026-03-07 16:59:33] 2026-03-07 15:58:32,599 | INFO     | all data control threads have been joined
[2026-03-07 16:59:33] 2026-03-07 15:58:32,791 | INFO     | all job control threads have been joined
[2026-03-07 16:59:33] 2026-03-07 15:58:33,273 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 16:59:33] 2026-03-07 15:58:33,369 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 16:59:33] 2026-03-07 15:58:33,428 | INFO     | [job] retrieve thread has finished
[2026-03-07 16:59:33] 2026-03-07 15:58:33,495 | INFO     | [payload] control thread has finished
[2026-03-07 16:59:33] 2026-03-07 15:58:33,538 | INFO     | [job] job monitor thread has finished
[2026-03-07 16:59:33] 2026-03-07 15:58:33,605 | INFO     | [data] control thread has finished
[2026-03-07 16:59:33] 2026-03-07 15:58:33,631 | INFO     | [job] validate thread has finished
[2026-03-07 16:59:33] 2026-03-07 15:58:33,797 | INFO     | [job] control thread has finished
[2026-03-07 16:59:33] 2026-03-07 15:58:33,916 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 16:59:33] 2026-03-07 15:58:34,170 | INFO     | [payload] failed_post thread has finished
[2026-03-07 16:59:33] 2026-03-07 15:58:34,202 | INFO     | [data] copytool_in thread has finished
[2026-03-07 16:59:33] 2026-03-07 15:58:34,215 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 16:59:33] 2026-03-07 15:58:34,314 | INFO     | [payload] validate_post thread has finished
[2026-03-07 16:59:33] 2026-03-07 15:58:34,889 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 16:59:33] 2026-03-07 15:58:35,278 | INFO     | [data] copytool_out thread has finished
[2026-03-07 16:59:33] 2026-03-07 15:58:35,359 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 16:59:33] 2026-03-07 15:58:36,364 | INFO     | [job] queue monitor thread has finished
[2026-03-07 16:59:33] 2026-03-07 15:58:37,375 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 16:59:33] 2026-03-07 15:58:43,208 | INFO     | job.realtimelogging is not enabled
[2026-03-07 16:59:33] 2026-03-07 15:58:44,213 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 16:59:33] 2026-03-07 15:59:03,610 | INFO     | PID=1488284 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 16:59:33] 2026-03-07 15:59:03,610 | INFO     | .. there are 12 such processes running
[2026-03-07 16:59:33] 2026-03-07 15:59:03,610 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 16:59:33] 2026-03-07 15:59:03,610 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 16:59:33] 2026-03-07 15:59:03,610 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 16:59:33] 2026-03-07 15:59:28,433 | INFO     | [monitor] cgroup control has ended
[2026-03-07 16:59:33] 2026-03-07 15:59:28,476 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22856067417920)>', '<ExcThread(monitor, started 22855829174016)>']
[2026-03-07 16:59:33] 2026-03-07 15:59:28,730 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 16:59:33] 2026-03-07 15:59:28,731 | INFO     | [monitor] control thread has ended
[2026-03-07 16:59:33] 2026-03-07 15:59:33,501 | INFO     | all workflow threads have been joined
[2026-03-07 16:59:33] 2026-03-07 15:59:33,502 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 16:59:33] 2026-03-07 15:59:33,502 | INFO     | traces error code: 0
[2026-03-07 16:59:33] 2026-03-07 15:59:33,502 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 16:59:33] 2026-03-07 15:59:33,675 [wrapper] ==== pilot stdout END ====
[2026-03-07 16:59:33] 2026-03-07 15:59:33,678 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 16:59:33] 2026-03-07 15:59:33,681 [wrapper] pilotpid: 1488284
[2026-03-07 16:59:33] 2026-03-07 15:59:33,684 [wrapper] Pilot exit status: 0
[2026-03-07 16:59:33] 2026-03-07 15:59:33,695 [wrapper] pandaids: 7043122726
[2026-03-07 16:59:33] 2026-03-07 15:59:33,768 [wrapper] cleanup supervisor_pilot 1795463 1488285
[2026-03-07 16:59:33] 2026-03-07 15:59:33,771 [wrapper] Test setup, not cleaning
[2026-03-07 16:59:33] 2026-03-07 15:59:33,774 [wrapper] apfmon messages muted
[2026-03-07 16:59:33] 2026-03-07 15:59:33,776 [wrapper] ==== wrapper stdout END ====
[2026-03-07 16:59:33] 2026-03-07 15:59:33,778 [wrapper] ==== wrapper stderr END ====
[2026-03-07 16:59:33]  *** Error codes and diagnostics ***
[2026-03-07 16:59:33]     "exeErrorCode": 0,
[2026-03-07 16:59:33]     "exeErrorDiag": "",
[2026-03-07 16:59:33]     "pilotErrorCode": 0,
[2026-03-07 16:59:33]     "pilotErrorDiag": "",
[2026-03-07 16:59:33]  *** Listing of results directory ***
[2026-03-07 16:59:33] total 405944
[2026-03-07 16:59:33] -rw-r--r--. 1 boinc boinc    584627 Mar  6 12:48 pilot3.tar.gz
[2026-03-07 16:59:33] -rwx------. 1 boinc boinc     36322 Mar  6 13:49 runpilot2-wrapper.sh
[2026-03-07 16:59:33] -rw-r--r--. 1 boinc boinc      5111 Mar  6 13:50 queuedata.json
[2026-03-07 16:59:33] -rw-r--r--. 1 boinc boinc       100 Mar  7 13:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 16:59:33] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 13:25 run_atlas
[2026-03-07 16:59:33] -rw-r--r--. 1 boinc boinc       105 Mar  7 13:25 job.xml
[2026-03-07 16:59:33] -rw-r--r--. 1 boinc boinc      6560 Mar  7 13:25 init_data.xml
[2026-03-07 16:59:33] -rw-r--r--. 2 boinc boinc 214042432 Mar  7 13:25 EVNT.48967027._000089.pool.root.1
[2026-03-07 16:59:33] -rw-r--r--. 2 boinc boinc     15845 Mar  7 13:25 start_atlas.sh
[2026-03-07 16:59:33] drwxrwx--x. 2 boinc boinc      4096 Mar  7 13:25 shared
[2026-03-07 16:59:33] -rw-r--r--. 2 boinc boinc    597948 Mar  7 13:25 input.tar.gz
[2026-03-07 16:59:33] -rw-r--r--. 1 boinc boinc         0 Mar  7 13:25 boinc_lockfile
[2026-03-07 16:59:33] -rw-r--r--. 1 boinc boinc      2563 Mar  7 13:25 pandaJob.out
[2026-03-07 16:59:33] -rw-------. 1 boinc boinc    999177 Mar  7 13:26 agis_schedconf.cvmfs.json
[2026-03-07 16:59:33] -rw-------. 1 boinc boinc       452 Mar  7 13:26 workernode_map.json
[2026-03-07 16:59:33] drwx------. 5 boinc boinc      4096 Mar  7 13:26 pilot3
[2026-03-07 16:59:33] -rw-------. 1 boinc boinc 193353136 Mar  7 16:57 HITS.48967030._001076.pool.root.1
[2026-03-07 16:59:33] -rw-r--r--. 1 boinc boinc       530 Mar  7 16:58 boinc_task_state.xml
[2026-03-07 16:59:33] -rw-------. 1 boinc boinc      1047 Mar  7 16:58 memory_monitor_summary.json
[2026-03-07 16:59:33] -rw-------. 1 boinc boinc   1521291 Mar  7 16:58 agis_ddmendpoints.agis.ALL.json
[2026-03-07 16:59:33] -rw-------. 1 boinc boinc    369578 Mar  7 16:58 log.48967030._001076.job.log.tgz.1
[2026-03-07 16:59:33] -rw-------. 1 boinc boinc      6398 Mar  7 16:58 heartbeat.json
[2026-03-07 16:59:33] -rw-------. 1 boinc boinc        95 Mar  7 16:58 pilot_heartbeat.json
[2026-03-07 16:59:33] -rw-r--r--. 1 boinc boinc        28 Mar  7 16:59 wrapper_checkpoint.txt
[2026-03-07 16:59:33] -rw-r--r--. 1 boinc boinc      8192 Mar  7 16:59 boinc_mmap_file
[2026-03-07 16:59:33] -rw-------. 1 boinc boinc      5087 Mar  7 16:59 pilotlog.txt
[2026-03-07 16:59:33] -rw-------. 1 boinc boinc   1809293 Mar  7 16:59 log.48967030._001076.job.log.1
[2026-03-07 16:59:33] -rw-------. 1 boinc boinc       357 Mar  7 16:59 output.list
[2026-03-07 16:59:33] -rw-r--r--. 1 boinc boinc       620 Mar  7 16:59 runtime_log
[2026-03-07 16:59:33] -rw-------. 1 boinc boinc   2191360 Mar  7 16:59 result.tar.gz
[2026-03-07 16:59:33] -rw-r--r--. 1 boinc boinc      9205 Mar  7 16:59 runtime_log.err
[2026-03-07 16:59:33] -rw-------. 1 boinc boinc       665 Mar  7 16:59 YB3LDmfnjI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm67RLDmLFlFYn.diag
[2026-03-07 16:59:33] -rw-r--r--. 1 boinc boinc     20843 Mar  7 16:59 stderr.txt
[2026-03-07 16:59:33] HITS file was successfully produced:
[2026-03-07 16:59:33] -rw-------. 1 boinc boinc 193353136 Mar  7 16:57 shared/HITS.pool.root.1
[2026-03-07 16:59:33]  *** Contents of shared directory: ***
[2026-03-07 16:59:33] total 400600
[2026-03-07 16:59:33] -rw-r--r--. 2 boinc boinc 214042432 Mar  7 13:25 ATLAS.root_0
[2026-03-07 16:59:33] -rw-r--r--. 2 boinc boinc     15845 Mar  7 13:25 start_atlas.sh
[2026-03-07 16:59:33] -rw-r--r--. 2 boinc boinc    597948 Mar  7 13:25 input.tar.gz
[2026-03-07 16:59:33] -rw-------. 1 boinc boinc 193353136 Mar  7 16:57 HITS.pool.root.1
[2026-03-07 16:59:33] -rw-------. 1 boinc boinc   2191360 Mar  7 16:59 result.tar.gz
16:59:35 (1484492): run_atlas exited; CPU time 49041.261068
16:59:35 (1484492): called boinc_finish(0)

</stderr_txt>
]]>

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