Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:35:39 (1023507): wrapper (7.7.26015): starting
04:35:39 (1023507): wrapper: running run_atlas (--nthreads 3)
[2026-03-07 04:35:39] Arguments: --nthreads 3
[2026-03-07 04:35:39] Threads: 3
[2026-03-07 04:35:39] Checking for CVMFS
[2026-03-07 04:35:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 04:35:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 04:35:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 04:35:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 04:35:41] 2.9.2.0 12686 6770 86992 156983 0 49 29250033 36864001 0 130560 0 2844081 99.984 242418 13723 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-07 04:35:41] CVMFS is ok
[2026-03-07 04:35:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 04:35:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 04:35:41] Further information can be found at the LHC@home message board.
[2026-03-07 04:35:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 04:35:41] Checking for apptainer binary...
[2026-03-07 04:35:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 04:35:41] Running /usr/bin/apptainer --version
[2026-03-07 04:35:41] apptainer version 1.4.1-1.1
[2026-03-07 04:35:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 04:35:41] thA337a
[2026-03-07 04:35:41] apptainer works
[2026-03-07 04:35:41] Set ATHENA_PROC_NUMBER=3
[2026-03-07 04:35:41] Set ATHENA_CORE_NUMBER=3
[2026-03-07 04:35:41] Starting ATLAS job with PandaID=7043122615
[2026-03-07 04:35:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 06:08:07]  *** The last 200 lines of the pilot log: ***
[2026-03-07 06:08:07] 2026-03-07 05:07:12,447 | INFO     | all data control threads have been joined
[2026-03-07 06:08:07] 2026-03-07 05:07:12,837 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 06:08:07] 2026-03-07 05:07:12,885 | INFO     | [job] retrieve thread has finished
[2026-03-07 06:08:07] 2026-03-07 05:07:12,889 | INFO     | [job] queue monitor thread has finished
[2026-03-07 06:08:07] 2026-03-07 05:07:12,982 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 06:08:07] 2026-03-07 05:07:13,087 | INFO     | all job control threads have been joined
[2026-03-07 06:08:07] 2026-03-07 05:07:13,162 | INFO     | [payload] validate_post thread has finished
[2026-03-07 06:08:07] 2026-03-07 05:07:13,180 | INFO     | all payload control threads have been joined
[2026-03-07 06:08:07] 2026-03-07 05:07:13,350 | INFO     | [job] job monitor thread has finished
[2026-03-07 06:08:07] 2026-03-07 05:07:13,453 | INFO     | [data] control thread has finished
[2026-03-07 06:08:07] 2026-03-07 05:07:13,639 | INFO     | [job] validate thread has finished
[2026-03-07 06:08:07] 2026-03-07 05:07:13,681 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 06:08:07] 2026-03-07 05:07:13,891 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 06:08:07] 2026-03-07 05:07:13,990 | INFO     | [data] copytool_in thread has finished
[2026-03-07 06:08:07] 2026-03-07 05:07:14,093 | INFO     | [job] control thread has finished
[2026-03-07 06:08:07] 2026-03-07 05:07:14,160 | INFO     | [payload] failed_post thread has finished
[2026-03-07 06:08:07] 2026-03-07 05:07:14,186 | INFO     | [payload] control thread has finished
[2026-03-07 06:08:07] 2026-03-07 05:07:14,373 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 06:08:07] 2026-03-07 05:07:14,843 | INFO     | [data] copytool_out thread has finished
[2026-03-07 06:08:07] 2026-03-07 05:07:15,890 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 06:08:07] 2026-03-07 05:07:42,816 | INFO     | PID=1027547 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 06:08:07] 2026-03-07 05:07:42,816 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 06:08:07] 2026-03-07 05:07:42,816 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 06:08:07] 2026-03-07 05:07:42,816 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 06:08:07] 2026-03-07 05:08:00,714 | INFO     | [monitor] cgroup control has ended
[2026-03-07 06:08:07] 2026-03-07 05:08:02,234 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139641096660800)>', '<ExcThread(monitor, started 139640342288128)>']
[2026-03-07 06:08:07] 2026-03-07 05:08:02,922 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 06:08:07] 2026-03-07 05:08:02,922 | INFO     | [monitor] control thread has ended
[2026-03-07 06:08:07] 2026-03-07 05:08:07,260 | INFO     | all workflow threads have been joined
[2026-03-07 06:08:07] 2026-03-07 05:08:07,260 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 06:08:07] 2026-03-07 05:08:07,260 | INFO     | traces error code: 0
[2026-03-07 06:08:07] 2026-03-07 05:08:07,260 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 06:08:07] 2026-03-07 05:08:07,311 [wrapper] ==== pilot stdout END ====
[2026-03-07 06:08:07] 2026-03-07 05:08:07,314 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 06:08:07] 2026-03-07 05:08:07,317 [wrapper] pilotpid: 1027547
[2026-03-07 06:08:07] 2026-03-07 05:08:07,319 [wrapper] Pilot exit status: 0
[2026-03-07 06:08:07] 2026-03-07 05:08:07,327 [wrapper] pandaids: 7043122615
[2026-03-07 06:08:07] 2026-03-07 05:08:07,345 [wrapper] cleanup supervisor_pilot 1037424 1027548
[2026-03-07 06:08:07] 2026-03-07 05:08:07,348 [wrapper] Test setup, not cleaning
[2026-03-07 06:08:07] 2026-03-07 05:08:07,350 [wrapper] apfmon messages muted
[2026-03-07 06:08:07] 2026-03-07 05:08:07,353 [wrapper] ==== wrapper stdout END ====
[2026-03-07 06:08:07] 2026-03-07 05:08:07,355 [wrapper] ==== wrapper stderr END ====
[2026-03-07 06:08:07]  *** Error codes and diagnostics ***
[2026-03-07 06:08:07]     "exeErrorCode": 0,
[2026-03-07 06:08:07]     "exeErrorDiag": "",
[2026-03-07 06:08:07]     "pilotErrorCode": 0,
[2026-03-07 06:08:07]     "pilotErrorDiag": "",
[2026-03-07 06:08:07]  *** Listing of results directory ***
[2026-03-07 06:08:07] total 405964
[2026-03-07 06:08:07] -rw-r--r-- 1 boinc boinc    584627 Mar  6 12:48 pilot3.tar.gz
[2026-03-07 06:08:07] -rw-r--r-- 1 boinc boinc      5111 Mar  6 13:20 queuedata.json
[2026-03-07 06:08:07] -rwx------ 1 boinc boinc     36322 Mar  6 13:21 runpilot2-wrapper.sh
[2026-03-07 06:08:07] -rw-r--r-- 1 boinc boinc       100 Mar  7 04:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 06:08:07] -rwxr-xr-x 1 boinc boinc      7986 Mar  7 04:35 run_atlas
[2026-03-07 06:08:07] -rw-r--r-- 1 boinc boinc       105 Mar  7 04:35 job.xml
[2026-03-07 06:08:07] -rw-r--r-- 2 boinc boinc 211906452 Mar  7 04:35 EVNT.48967027._000084.pool.root.1
[2026-03-07 06:08:07] drwxrwx--x 2 boinc boinc      4096 Mar  7 04:35 shared
[2026-03-07 06:08:07] -rw-r--r-- 2 boinc boinc    597943 Mar  7 04:35 input.tar.gz
[2026-03-07 06:08:07] -rw-r--r-- 2 boinc boinc     15845 Mar  7 04:35 start_atlas.sh
[2026-03-07 06:08:07] -rw-r--r-- 1 boinc boinc         0 Mar  7 04:35 boinc_setup_complete
[2026-03-07 06:08:07] -rw-r--r-- 1 boinc boinc      6447 Mar  7 04:35 init_data.xml
[2026-03-07 06:08:07] -rw-r--r-- 1 boinc boinc         0 Mar  7 04:35 boinc_lockfile
[2026-03-07 06:08:07] -rw-r--r-- 1 boinc boinc      2564 Mar  7 04:35 pandaJob.out
[2026-03-07 06:08:07] -rw------- 1 boinc boinc    999186 Mar  7 04:35 agis_schedconf.cvmfs.json
[2026-03-07 06:08:07] -rw------- 1 boinc boinc   1521291 Mar  7 04:35 agis_ddmendpoints.agis.ALL.json
[2026-03-07 06:08:07] -rw------- 1 boinc boinc       424 Mar  7 04:35 workernode_map.json
[2026-03-07 06:08:07] drwx------ 5 boinc boinc      4096 Mar  7 04:35 pilot3
[2026-03-07 06:08:07] -rw------- 1 boinc boinc 197769870 Mar  7 06:06 HITS.48967030._000965.pool.root.1
[2026-03-07 06:08:07] -rw-r--r-- 1 boinc boinc       529 Mar  7 06:06 boinc_task_state.xml
[2026-03-07 06:08:07] -rw------- 1 boinc boinc      1014 Mar  7 06:07 memory_monitor_summary.json
[2026-03-07 06:08:07] -rw------- 1 boinc boinc    263452 Mar  7 06:07 log.48967030._000965.job.log.tgz.1
[2026-03-07 06:08:07] -rw------- 1 boinc boinc      6290 Mar  7 06:07 heartbeat.json
[2026-03-07 06:08:07] -rw-r--r-- 1 boinc boinc      8192 Mar  7 06:07 boinc_mmap_file
[2026-03-07 06:08:07] -rw-r--r-- 1 boinc boinc        27 Mar  7 06:07 wrapper_checkpoint.txt
[2026-03-07 06:08:07] -rw------- 1 boinc boinc        95 Mar  7 06:07 pilot_heartbeat.json
[2026-03-07 06:08:07] -rw------- 1 boinc boinc      4748 Mar  7 06:08 pilotlog.txt
[2026-03-07 06:08:07] -rw------- 1 boinc boinc    798578 Mar  7 06:08 log.48967030._000965.job.log.1
[2026-03-07 06:08:07] -rw------- 1 boinc boinc       357 Mar  7 06:08 output.list
[2026-03-07 06:08:07] -rw-r--r-- 1 boinc boinc       620 Mar  7 06:08 runtime_log
[2026-03-07 06:08:07] -rw------- 1 boinc boinc   1075200 Mar  7 06:08 result.tar.gz
[2026-03-07 06:08:07] -rw------- 1 boinc boinc       658 Mar  7 06:08 wE2LDmTMjI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm40RLDm5NsVpm.diag
[2026-03-07 06:08:07] -rw-r--r-- 1 boinc boinc      8901 Mar  7 06:08 runtime_log.err
[2026-03-07 06:08:07] -rw-r--r-- 1 boinc boinc      6733 Mar  7 06:08 stderr.txt
[2026-03-07 06:08:07] HITS file was successfully produced:
[2026-03-07 06:08:07] -rw------- 1 boinc boinc 197769870 Mar  7 06:06 shared/HITS.pool.root.1
[2026-03-07 06:08:07]  *** Contents of shared directory: ***
[2026-03-07 06:08:07] total 401728
[2026-03-07 06:08:07] -rw-r--r-- 2 boinc boinc 211906452 Mar  7 04:35 ATLAS.root_0
[2026-03-07 06:08:07] -rw-r--r-- 2 boinc boinc    597943 Mar  7 04:35 input.tar.gz
[2026-03-07 06:08:07] -rw-r--r-- 2 boinc boinc     15845 Mar  7 04:35 start_atlas.sh
[2026-03-07 06:08:07] -rw------- 1 boinc boinc 197769870 Mar  7 06:06 HITS.pool.root.1
[2026-03-07 06:08:07] -rw------- 1 boinc boinc   1075200 Mar  7 06:08 result.tar.gz
06:08:08 (1023507): run_atlas exited; CPU time 15786.008365
06:08:08 (1023507): called boinc_finish(0)

</stderr_txt>
]]>

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