Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:31:32 (27992): wrapper (7.7.26015): starting
07:31:32 (27992): wrapper: running run_atlas (--nthreads 12)
[2026-03-06 07:31:32] Arguments: --nthreads 12
[2026-03-06 07:31:32] Threads: 12
[2026-03-06 07:31:32] Checking for CVMFS
[2026-03-06 07:31:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 07:31:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 07:31:33] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 07:31:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 07:31:33] 2.11.2.0 723 261632 99132 156957 0 50 20083783 20275201 1 130560 0 107038096 99.921 14256120 34716 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-06 07:31:33] CVMFS is ok
[2026-03-06 07:31:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 07:31:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 07:31:33] Further information can be found at the LHC@home message board.
[2026-03-06 07:31:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 07:31:33] Checking for apptainer binary...
[2026-03-06 07:31:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-06 07:31:33] Running /usr/bin/apptainer --version
[2026-03-06 07:31:33] apptainer version 1.3.2-1.el7
[2026-03-06 07:31:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 07:31:34] c-205-1.aglt2.org
[2026-03-06 07:31:34] apptainer works
[2026-03-06 07:31:34] Set ATHENA_PROC_NUMBER=12
[2026-03-06 07:31:34] Set ATHENA_CORE_NUMBER=12
[2026-03-06 07:31:34] Starting ATLAS job with PandaID=7038495342
[2026-03-06 07:31:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 08:39:14]  *** The last 200 lines of the pilot log: ***
[2026-03-06 08:39:14]  is_tar=False
[2026-03-06 08:39:14]  lfn=log.48955015._000057.job.log.tgz.1
[2026-03-06 08:39:14]  mtime=0
[2026-03-06 08:39:14]  protocol_id=None
[2026-03-06 08:39:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-06 08:39:14]  replicas=None
[2026-03-06 08:39:14]  scope=mc23_13p6TeV
[2026-03-06 08:39:14]  status=None
[2026-03-06 08:39:14]  status_code=0
[2026-03-06 08:39:14]  storage_token=
[2026-03-06 08:39:14]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7038495342/log.48955015._000057.job.log.tgz.1
[2026-03-06 08:39:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/c7/log.48955015._000057.job.log.tgz.1
[2026-03-06 08:39:14]  workdir=None
[2026-03-06 08:39:14] ]
[2026-03-06 08:39:14] 2026-03-06 13:38:36,726 | INFO     | transferring file log.48955015._000057.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7038495342/log.48955015._000057.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-06 08:39:14] 2026-03-06 13:38:36,726 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7038495342/log.48955015._000057.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955015._000057.job
[2026-03-06 08:39:14] 2026-03-06 13:38:36,749 | INFO     | adding to output.list: log.48955015._000057.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/c7/log.48955015._000057.job.log.tg
[2026-03-06 08:39:14] 2026-03-06 13:38:36,750 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-06 08:39:14] 2026-03-06 13:38:36,750 | INFO     | summary of transferred files:
[2026-03-06 08:39:14] 2026-03-06 13:38:36,750 | INFO     |  -- lfn=log.48955015._000057.job.log.tgz.1, status_code=0, status=transferred
[2026-03-06 08:39:14] 2026-03-06 13:38:36,750 | INFO     | stage-out finished correctly
[2026-03-06 08:39:14] 2026-03-06 13:38:37,047 | INFO     | time since job start (4001s) is within the limit (349056.0s)
[2026-03-06 08:39:14] 2026-03-06 13:38:37,102 | WARNING  | process 4125 can no longer be monitored (due to stat problems) - aborting
[2026-03-06 08:39:14] 2026-03-06 13:38:37,103 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7038495342/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 08:39:14] 2026-03-06 13:38:37,191 | INFO     | number of running child processes to parent process 4125: 1
[2026-03-06 08:39:14] 2026-03-06 13:38:37,191 | INFO     | maximum number of monitored processes: 6
[2026-03-06 08:39:14] 2026-03-06 13:38:38,622 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-06 08:39:14] 2026-03-06 13:38:39,053 | INFO     | time since job start (4003s) is within the limit (349056.0s)
[2026-03-06 08:39:14] 2026-03-06 13:38:39,694 | INFO     | monitor loop #305: job 0:7038495342 is in state 'finished'
[2026-03-06 08:39:14] 2026-03-06 13:38:39,694 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-06 08:39:14] 2026-03-06 13:38:41,058 | INFO     | time since job start (4005s) is within the limit (349056.0s)
[2026-03-06 08:39:14] 2026-03-06 13:38:41,457 | INFO     | job 7038495342 has state=finished
[2026-03-06 08:39:14] 2026-03-06 13:38:41,458 | INFO     | preparing for final server update for job 7038495342 in state='finished'
[2026-03-06 08:39:14] 2026-03-06 13:38:41,458 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7038495342/jobReport.json
[2026-03-06 08:39:14] 2026-03-06 13:38:41,461 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-06 08:39:14] 2026-03-06 13:38:41,461 | INFO     | this job has now completed (state=finished)
[2026-03-06 08:39:14] 2026-03-06 13:38:41,461 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-06 08:39:14] 2026-03-06 13:38:41,462 | INFO     | log transfer has been attempted: DONE
[2026-03-06 08:39:14] 2026-03-06 13:38:41,462 | INFO     | job 7038495342 has finished - writing final server update
[2026-03-06 08:39:14] 2026-03-06 13:38:41,462 | INFO     | total number of processed events: 400 (read)
[2026-03-06 08:39:14] 2026-03-06 13:38:41,465 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7038495342/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 08:39:14] 2026-03-06 13:38:41,466 | INFO     | extracted standard info from prmon json
[2026-03-06 08:39:14] 2026-03-06 13:38:41,466 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 08:39:14] 2026-03-06 13:38:41,466 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 08:39:14] 2026-03-06 13:38:41,466 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 08:39:14] 2026-03-06 13:38:41,466 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 08:39:14] 2026-03-06 13:38:41,467 | INFO     | fitting pss+swap vs Time
[2026-03-06 08:39:14] 2026-03-06 13:38:41,468 | INFO     | sum of square deviations: 63666310.0
[2026-03-06 08:39:14] 2026-03-06 13:38:41,468 | INFO     | sum of deviations: -6378291028.0
[2026-03-06 08:39:14] 2026-03-06 13:38:41,468 | INFO     | mean x: 1772802414.0
[2026-03-06 08:39:14] 2026-03-06 13:38:41,468 | INFO     | mean y: 2855806.9322033897
[2026-03-06 08:39:14] 2026-03-06 13:38:41,468 | INFO     | intersect: 177607773252.79865
[2026-03-06 08:39:14] 2026-03-06 13:38:41,469 | INFO     | chi2: 0.051290806920972265
[2026-03-06 08:39:14] 2026-03-06 13:38:41,469 | INFO     | current memory leak: -100.18 B/s (using 59 data points, chi2=0.05)
[2026-03-06 08:39:14] 2026-03-06 13:38:41,469 | INFO     | could have reported an average CPU frequency of 1695 MHz (6 samples)
[2026-03-06 08:39:14] 2026-03-06 13:38:41,469 | INFO     | ..............................
[2026-03-06 08:39:14] 2026-03-06 13:38:41,469 | INFO     | . Timing measurements:
[2026-03-06 08:39:14] 2026-03-06 13:38:41,469 | INFO     | . get job = 0 s
[2026-03-06 08:39:14] 2026-03-06 13:38:41,469 | INFO     | . initial setup = 7 s
[2026-03-06 08:39:14] 2026-03-06 13:38:41,469 | INFO     | . payload setup = 7 s
[2026-03-06 08:39:14] 2026-03-06 13:38:41,470 | INFO     | . stage-in = 0 s
[2026-03-06 08:39:14] 2026-03-06 13:38:41,470 | INFO     | . payload execution = 3977 s
[2026-03-06 08:39:14] 2026-03-06 13:38:41,470 | INFO     | . stage-out = 0 s
[2026-03-06 08:39:14] 2026-03-06 13:38:41,470 | INFO     | . log creation = 0 s
[2026-03-06 08:39:14] 2026-03-06 13:38:41,470 | INFO     | ..............................
[2026-03-06 08:39:14] 2026-03-06 13:38:41,564 | INFO     | 
[2026-03-06 08:39:14] 2026-03-06 13:38:41,564 | INFO     | job summary report
[2026-03-06 08:39:14] 2026-03-06 13:38:41,564 | INFO     | --------------------------------------------------
[2026-03-06 08:39:14] 2026-03-06 13:38:41,564 | INFO     | PanDA job id: 7038495342
[2026-03-06 08:39:14] 2026-03-06 13:38:41,564 | INFO     | task id: 48955015
[2026-03-06 08:39:14] 2026-03-06 13:38:41,565 | INFO     | errors: (none)
[2026-03-06 08:39:14] 2026-03-06 13:38:41,565 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 08:39:14] 2026-03-06 13:38:41,565 | INFO     | pilot state: finished 
[2026-03-06 08:39:14] 2026-03-06 13:38:41,565 | INFO     | transexitcode: 0
[2026-03-06 08:39:14] 2026-03-06 13:38:41,565 | INFO     | exeerrorcode: 0
[2026-03-06 08:39:14] 2026-03-06 13:38:41,565 | INFO     | exeerrordiag: 
[2026-03-06 08:39:14] 2026-03-06 13:38:41,566 | INFO     | exitcode: 0
[2026-03-06 08:39:14] 2026-03-06 13:38:41,566 | INFO     | exitmsg: OK
[2026-03-06 08:39:14] 2026-03-06 13:38:41,566 | INFO     | cpuconsumptiontime: 43558 s
[2026-03-06 08:39:14] 2026-03-06 13:38:41,566 | INFO     | nevents: 400
[2026-03-06 08:39:14] 2026-03-06 13:38:41,566 | INFO     | neventsw: 0
[2026-03-06 08:39:14] 2026-03-06 13:38:41,566 | INFO     | pid: 4125
[2026-03-06 08:39:14] 2026-03-06 13:38:41,567 | INFO     | pgrp: 4125
[2026-03-06 08:39:14] 2026-03-06 13:38:41,567 | INFO     | corecount: 12
[2026-03-06 08:39:14] 2026-03-06 13:38:41,567 | INFO     | event service: False
[2026-03-06 08:39:14] 2026-03-06 13:38:41,567 | INFO     | sizes: {0: 2295370, 1: 2295831, 12: 2295831, 3988: 2321682, 3989: 2330680, 3991: 2330736, 3994: 2331058}
[2026-03-06 08:39:14] 2026-03-06 13:38:41,567 | INFO     | --------------------------------------------------
[2026-03-06 08:39:14] 2026-03-06 13:38:41,567 | INFO     | 
[2026-03-06 08:39:14] 2026-03-06 13:38:41,567 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-06 08:39:14] 2026-03-06 13:38:41,590 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 08:39:14] 2026-03-06 13:38:41,590 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 08:39:14] 2026-03-06 13:38:41,591 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 08:39:14] 2026-03-06 13:38:41,591 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 08:39:14] 2026-03-06 13:38:41,591 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 08:39:14] 2026-03-06 13:38:41,591 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 08:39:14] 2026-03-06 13:38:41,591 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 08:39:14] 2026-03-06 13:38:41,592 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 08:39:14] 2026-03-06 13:38:41,592 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 08:39:14] 2026-03-06 13:38:41,592 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 08:39:14] 2026-03-06 13:38:41,592 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 08:39:14] 2026-03-06 13:38:41,592 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 08:39:14] 2026-03-06 13:38:41,592 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 08:39:14] 2026-03-06 13:38:41,593 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 08:39:14] 2026-03-06 13:38:41,593 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 08:39:14] 2026-03-06 13:38:41,593 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 08:39:14] 2026-03-06 13:38:41,593 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 08:39:14] 2026-03-06 13:38:41,593 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 08:39:14] 2026-03-06 13:38:41,593 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 08:39:14] 2026-03-06 13:38:41,594 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 08:39:14] 2026-03-06 13:38:41,594 | INFO     | job 7038495342 has completed (purged errors)
[2026-03-06 08:39:14] 2026-03-06 13:38:41,594 | INFO     | overall cleanup function is called
[2026-03-06 08:39:14] 2026-03-06 13:38:42,602 | INFO     | --- collectZombieJob: --- 10, [4125]
[2026-03-06 08:39:14] 2026-03-06 13:38:42,602 | INFO     | zombie collector waiting for pid 4125
[2026-03-06 08:39:14] 2026-03-06 13:38:42,602 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 08:39:14] 2026-03-06 13:38:42,603 | INFO     | collected zombie processes
[2026-03-06 08:39:14] 2026-03-06 13:38:42,603 | INFO     | will attempt to kill all subprocesses of pid=4125
[2026-03-06 08:39:14] 2026-03-06 13:38:42,695 | INFO     | process IDs to be killed: [4125] (in reverse order)
[2026-03-06 08:39:14] 2026-03-06 13:38:42,751 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 08:39:14] 2026-03-06 13:38:42,751 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 08:39:14] 2026-03-06 13:38:42,755 | INFO     | did not find any defunct processes belonging to 4125
[2026-03-06 08:39:14] 2026-03-06 13:38:42,758 | INFO     | did not find any defunct processes belonging to 4125
[2026-03-06 08:39:14] 2026-03-06 13:38:42,758 | INFO     | ready for new job
[2026-03-06 08:39:14] 2026-03-06 13:38:42,758 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 08:39:14] 2026-03-06 13:38:42,759 | INFO     | **************************************
[2026-03-06 08:39:14] 2026-03-06 13:38:42,760 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 08:39:14] 2026-03-06 13:38:42,760 | INFO     | **************************************
[2026-03-06 08:39:14] 2026-03-06 13:38:42,760 | INFO     | 
[2026-03-06 08:39:14] 2026-03-06 13:38:42,760 | INFO     | architecture information:
[2026-03-06 08:39:14] 2026-03-06 13:38:42,761 | INFO     | executing command: cat /etc/os-release
[2026-03-06 08:39:14] 2026-03-06 13:38:42,775 | INFO     | cat /etc/os-release:
[2026-03-06 08:39:14] NAME="CentOS Linux"
[2026-03-06 08:39:14] VERSION="7 (Core)"
[2026-03-06 08:39:14] ID="centos"
[2026-03-06 08:39:14] ID_LIKE="rhel fedora"
[2026-03-06 08:39:14] VERSION_ID="7"
[2026-03-06 08:39:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 08:39:14] ANSI_COLOR="0;31"
[2026-03-06 08:39:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 08:39:14] HOME_URL="https://www.centos.org/"
[2026-03-06 08:39:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 08:39:14] 
[2026-03-06 08:39:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 08:39:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 08:39:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 08:39:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 08:39:14] 
[2026-03-06 08:39:14] 2026-03-06 13:38:42,776 | INFO     | **************************************
[2026-03-06 08:39:14] 2026-03-06 13:38:43,279 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-06 08:39:14] 2026-03-06 13:38:43,295 | INFO     | sufficient remaining disk space (29018292224 B)
[2026-03-06 08:39:14] 2026-03-06 13:38:43,295 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 08:39:14] 2026-03-06 13:38:43,296 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 08:39:14] 2026-03-06 13:38:43,296 | INFO     | update_server=False
[2026-03-06 08:39:14] 2026-03-06 13:38:43,296 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 08:39:14] 2026-03-06 13:38:43,296 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 08:39:14] 2026-03-06 13:38:43,296 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 08:39:14] 2026-03-06 13:38:43,297 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 08:39:14] 2026-03-06 13:38:43,297 | INFO     | aborting loop
[2026-03-06 08:39:14] 2026-03-06 13:38:43,369 | INFO     | all data control threads have been joined
[2026-03-06 08:39:14] 2026-03-06 13:38:44,060 | INFO     | all job control threads have been joined
[2026-03-06 08:39:14] 2026-03-06 13:38:44,298 | INFO     | [job] retrieve thread has finished
[2026-03-06 08:39:14] 2026-03-06 13:38:44,302 | INFO     | [job] queue monitor thread has finished
[2026-03-06 08:39:14] 2026-03-06 13:38:44,303 | INFO     | [job] job monitor thread has finished
[2026-03-06 08:39:14] 2026-03-06 13:38:44,372 | INFO     | [data] control thread has finished
[2026-03-06 08:39:14] 2026-03-06 13:38:44,427 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 08:39:14] 2026-03-06 13:38:44,515 | INFO     | all payload control threads have been joined
[2026-03-06 08:39:14] 2026-03-06 13:38:44,704 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 08:39:14] 2026-03-06 13:38:44,930 | INFO     | [data] copytool_in thread has finished
[2026-03-06 08:39:14] 2026-03-06 13:38:45,007 | INFO     | [payload] validate_post thread has finished
[2026-03-06 08:39:14] 2026-03-06 13:38:45,065 | INFO     | [job] control thread has finished
[2026-03-06 08:39:14] 2026-03-06 13:38:45,303 | INFO     | [data] copytool_out thread has finished
[2026-03-06 08:39:14] 2026-03-06 13:38:45,502 | INFO     | [payload] failed_post thread has finished
[2026-03-06 08:39:14] 2026-03-06 13:38:45,519 | INFO     | [payload] control thread has finished
[2026-03-06 08:39:14] 2026-03-06 13:38:45,548 | INFO     | [job] validate thread has finished
[2026-03-06 08:39:14] 2026-03-06 13:38:45,757 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 08:39:14] 2026-03-06 13:38:45,767 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 08:39:14] 2026-03-06 13:38:48,710 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 08:39:14] 2026-03-06 13:38:53,938 | INFO     | job.realtimelogging is not enabled
[2026-03-06 08:39:14] 2026-03-06 13:38:54,944 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 08:39:14] 2026-03-06 13:39:01,969 | INFO     | [monitor] cgroup control has ended
[2026-03-06 08:39:14] 2026-03-06 13:39:03,952 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140148618704704)>', '<ExcThread(monitor, started 140148037629696)>']
[2026-03-06 08:39:14] 2026-03-06 13:39:08,977 | INFO     | all workflow threads have been joined
[2026-03-06 08:39:14] 2026-03-06 13:39:08,978 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 08:39:14] 2026-03-06 13:39:08,978 | INFO     | traces error code: 0
[2026-03-06 08:39:14] 2026-03-06 13:39:08,978 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 08:39:14] 2026-03-06 13:39:14,254 | INFO     | PID=31967 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-06 08:39:14] 2026-03-06 13:39:14,255 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 08:39:14] 2026-03-06 13:39:14,255 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 08:39:14] 2026-03-06 13:39:14,255 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 08:39:14] 2026-03-06 13:39:14,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 08:39:14] 2026-03-06 13:39:14,255 | INFO     | [monitor] control thread has ended
[2026-03-06 08:39:14] 2026-03-06 13:39:14,345 [wrapper] ==== pilot stdout END ====
[2026-03-06 08:39:14] 2026-03-06 13:39:14,349 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 08:39:14] 2026-03-06 13:39:14,352 [wrapper] pilotpid: 31967
[2026-03-06 08:39:14] 2026-03-06 13:39:14,356 [wrapper] Pilot exit status: 0
[2026-03-06 08:39:14] 2026-03-06 13:39:14,373 [wrapper] pandaids: 7038495342
[2026-03-06 08:39:14] 2026-03-06 13:39:14,413 [wrapper] cleanup supervisor_pilot 30400 31968
[2026-03-06 08:39:14] 2026-03-06 13:39:14,417 [wrapper] Test setup, not cleaning
[2026-03-06 08:39:14] 2026-03-06 13:39:14,421 [wrapper] apfmon messages muted
[2026-03-06 08:39:14] 2026-03-06 13:39:14,425 [wrapper] ==== wrapper stdout END ====
[2026-03-06 08:39:14] 2026-03-06 13:39:14,428 [wrapper] ==== wrapper stderr END ====
[2026-03-06 08:39:14]  *** Error codes and diagnostics ***
[2026-03-06 08:39:14]     "exeErrorCode": 0,
[2026-03-06 08:39:14]     "exeErrorDiag": "",
[2026-03-06 08:39:14]     "pilotErrorCode": 0,
[2026-03-06 08:39:14]     "pilotErrorDiag": "",
[2026-03-06 08:39:14]  *** Listing of results directory ***
[2026-03-06 08:39:14] total 621340
[2026-03-06 08:39:14] -rw-r--r-- 1 boincer umatlas    584627 Mar  4 08:58 pilot3.tar.gz
[2026-03-06 08:39:14] -rwx------ 1 boincer umatlas     36322 Mar  4 08:58 runpilot2-wrapper.sh
[2026-03-06 08:39:14] -rw-r--r-- 1 boincer umatlas      5111 Mar  4 09:00 queuedata.json
[2026-03-06 08:39:14] -rw-r--r-- 1 boincer umatlas       100 Mar  6 07:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 08:39:14] -rwxr-xr-x 1 boincer umatlas      7986 Mar  6 07:31 run_atlas
[2026-03-06 08:39:14] -rw-r--r-- 1 boincer umatlas       105 Mar  6 07:31 job.xml
[2026-03-06 08:39:14] -rw-r--r-- 2 boincer umatlas 443169357 Mar  6 07:31 EVNT.46701403._002044.pool.root.1
[2026-03-06 08:39:14] -rw-r--r-- 2 boincer umatlas     15845 Mar  6 07:31 start_atlas.sh
[2026-03-06 08:39:14] drwxrwx--x 2 boincer umatlas      4096 Mar  6 07:31 shared
[2026-03-06 08:39:14] -rw-r--r-- 2 boincer umatlas    597944 Mar  6 07:31 input.tar.gz
[2026-03-06 08:39:14] -rw-r--r-- 1 boincer umatlas         0 Mar  6 07:31 boinc_lockfile
[2026-03-06 08:39:14] -rw-r--r-- 1 boincer umatlas      2567 Mar  6 07:31 pandaJob.out
[2026-03-06 08:39:14] -rw------- 1 boincer umatlas        57 Mar  6 07:31 setup.sh.local
[2026-03-06 08:39:14] -rw------- 1 boincer umatlas    998899 Mar  6 07:31 agis_schedconf.cvmfs.json
[2026-03-06 08:39:14] -rw------- 1 boincer umatlas   1521291 Mar  6 07:31 agis_ddmendpoints.agis.ALL.json
[2026-03-06 08:39:14] -rw------- 1 boincer umatlas       433 Mar  6 07:31 workernode_map.json
[2026-03-06 08:39:14] drwx------ 5 boincer umatlas      4096 Mar  6 07:31 pilot3
[2026-03-06 08:39:14] -rw------- 1 boincer umatlas 187234579 Mar  6 08:38 HITS.48955015._000057.pool.root.1
[2026-03-06 08:39:14] -rw-r--r-- 1 boincer umatlas       530 Mar  6 08:38 boinc_task_state.xml
[2026-03-06 08:39:14] -rw------- 1 boincer umatlas      1045 Mar  6 08:38 memory_monitor_summary.json
[2026-03-06 08:39:14] -rw------- 1 boincer umatlas    370227 Mar  6 08:38 log.48955015._000057.job.log.tgz.1
[2026-03-06 08:39:14] -rw------- 1 boincer umatlas      6403 Mar  6 08:38 heartbeat.json
[2026-03-06 08:39:14] -rw-r--r-- 1 boincer umatlas      5952 Mar  6 08:39 init_data.xml
[2026-03-06 08:39:14] -rw-r--r-- 1 boincer umatlas      8192 Mar  6 08:39 boinc_mmap_file
[2026-03-06 08:39:14] -rw-r--r-- 1 boincer umatlas        27 Mar  6 08:39 wrapper_checkpoint.txt
[2026-03-06 08:39:14] -rw------- 1 boincer umatlas        95 Mar  6 08:39 pilot_heartbeat.json
[2026-03-06 08:39:14] -rw------- 1 boincer umatlas       745 Mar  6 08:39 pilotlog.txt
[2026-03-06 08:39:14] -rw------- 1 boincer umatlas    588375 Mar  6 08:39 log.48955015._000057.job.log.1
[2026-03-06 08:39:14] -rw------- 1 boincer umatlas       357 Mar  6 08:39 output.list
[2026-03-06 08:39:14] -rw-r--r-- 1 boincer umatlas       620 Mar  6 08:39 runtime_log
[2026-03-06 08:39:14] -rw------- 1 boincer umatlas    972800 Mar  6 08:39 result.tar.gz
[2026-03-06 08:39:14] -rw-r--r-- 1 boincer umatlas      9338 Mar  6 08:39 runtime_log.err
[2026-03-06 08:39:14] -rw------- 1 boincer umatlas       658 Mar  6 08:39 qx9KDmlv1H9n9Rq4apOajLDm4fhM0noT9bVooX4SDmXcILDmOU5D3m.diag
[2026-03-06 08:39:14] -rw-r--r-- 1 boincer umatlas     21563 Mar  6 08:39 stderr.txt
[2026-03-06 08:39:14] HITS file was successfully produced:
[2026-03-06 08:39:14] -rw------- 1 boincer umatlas 187234579 Mar  6 08:38 shared/HITS.pool.root.1
[2026-03-06 08:39:14]  *** Contents of shared directory: ***
[2026-03-06 08:39:14] total 617188
[2026-03-06 08:39:14] -rw-r--r-- 2 boincer umatlas 443169357 Mar  6 07:31 ATLAS.root_0
[2026-03-06 08:39:14] -rw-r--r-- 2 boincer umatlas     15845 Mar  6 07:31 start_atlas.sh
[2026-03-06 08:39:14] -rw-r--r-- 2 boincer umatlas    597944 Mar  6 07:31 input.tar.gz
[2026-03-06 08:39:14] -rw------- 1 boincer umatlas 187234579 Mar  6 08:38 HITS.pool.root.1
[2026-03-06 08:39:14] -rw------- 1 boincer umatlas    972800 Mar  6 08:39 result.tar.gz
08:39:16 (27992): run_atlas exited; CPU time 43531.021678
08:39:16 (27992): called boinc_finish(0)

</stderr_txt>
]]>

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