Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:00:37 (1381352): wrapper (7.7.26015): starting
15:00:37 (1381352): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 15:00:37] Arguments: --nthreads 4
[2026-03-07 15:00:37] Threads: 4
[2026-03-07 15:00:37] Checking for CVMFS
[2026-03-07 15:00:37] No cvmfs_config command found, will try listing directly
[2026-03-07 15:00:37] CVMFS is ok
[2026-03-07 15:00:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 15:00:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 15:00:37] Further information can be found at the LHC@home message board.
[2026-03-07 15:00:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 15:00:37] Checking for apptainer binary...
[2026-03-07 15:00:37] which: no apptainer in ((null))
[2026-03-07 15:00:37] apptainer is not installed, using version from CVMFS
[2026-03-07 15:00:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 15:00:37] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot80/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-07 15:00:37] apptainer works
[2026-03-07 15:00:37] Set ATHENA_PROC_NUMBER=4
[2026-03-07 15:00:37] Set ATHENA_CORE_NUMBER=4
[2026-03-07 15:00:37] Starting ATLAS job with PandaID=7043117177
[2026-03-07 15:00:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot80/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 16:20:03]  *** The last 200 lines of the pilot log: ***
[2026-03-07 16:20:03]  is_tar=False
[2026-03-07 16:20:03]  lfn=log.48958651._001675.job.log.tgz.1
[2026-03-07 16:20:03]  mtime=0
[2026-03-07 16:20:03]  protocol_id=None
[2026-03-07 16:20:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 16:20:03]  replicas=None
[2026-03-07 16:20:03]  scope=mc23_13p6TeV
[2026-03-07 16:20:03]  status=None
[2026-03-07 16:20:03]  status_code=0
[2026-03-07 16:20:03]  storage_token=
[2026-03-07 16:20:03]  surl=/var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7043117177/log.48958651._001675.job.log.tgz.1
[2026-03-07 16:20:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/b9/log.48958651._001675.job.log.tgz.1
[2026-03-07 16:20:03]  workdir=None
[2026-03-07 16:20:03] ]
[2026-03-07 16:20:03] 2026-03-07 15:18:50,735 | INFO     | transferring file log.48958651._001675.job.log.tgz.1 from /var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7043117177/log.48958651._001675.job.log.tgz.1 to /var/lib/b
[2026-03-07 16:20:03] 2026-03-07 15:18:50,735 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7043117177/log.48958651._001675.job.log.tgz.1 /var/lib/boinc/var/slot80/slots/2/lo
[2026-03-07 16:20:03] 2026-03-07 15:18:50,769 | INFO     | adding to output.list: log.48958651._001675.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/b9/log.48958651._001675.job.log.tg
[2026-03-07 16:20:03] 2026-03-07 15:18:50,770 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 16:20:03] 2026-03-07 15:18:50,770 | INFO     | summary of transferred files:
[2026-03-07 16:20:03] 2026-03-07 15:18:50,770 | INFO     |  -- lfn=log.48958651._001675.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 16:20:03] 2026-03-07 15:18:50,771 | INFO     | stage-out finished correctly
[2026-03-07 16:20:03] 2026-03-07 15:18:51,226 | INFO     | time since job start (4682s) is within the limit (349056.0s)
[2026-03-07 16:20:03] 2026-03-07 15:18:53,311 | INFO     | PID=1388219 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-07 16:20:03] 2026-03-07 15:18:53,311 | INFO     | .. there are 55 such processes running
[2026-03-07 16:20:03] 2026-03-07 15:18:53,538 | WARNING  | process 1406355 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 16:20:03] 2026-03-07 15:18:53,538 | INFO     | using path: /var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7043117177/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 16:20:03] 2026-03-07 15:18:53,872 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 16:20:03] 2026-03-07 15:18:53,954 | INFO     | job 7043117177 has state=finished
[2026-03-07 16:20:03] 2026-03-07 15:18:53,954 | INFO     | preparing for final server update for job 7043117177 in state='finished'
[2026-03-07 16:20:03] 2026-03-07 15:18:53,954 | INFO     | reading metadata from: /var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7043117177/jobReport.json
[2026-03-07 16:20:03] 2026-03-07 15:18:53,956 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot80/slots/2/workernode_map.json
[2026-03-07 16:20:03] 2026-03-07 15:18:53,957 | INFO     | this job has now completed (state=finished)
[2026-03-07 16:20:03] 2026-03-07 15:18:53,957 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 16:20:03] 2026-03-07 15:18:53,957 | INFO     | log transfer has been attempted: DONE
[2026-03-07 16:20:03] 2026-03-07 15:18:53,957 | INFO     | job 7043117177 has finished - writing final server update
[2026-03-07 16:20:03] 2026-03-07 15:18:53,957 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_219633/.job.ad'
[2026-03-07 16:20:03] 2026-03-07 15:18:53,957 | INFO     | total number of processed events: 400 (read)
[2026-03-07 16:20:03] 2026-03-07 15:18:53,976 | INFO     | using path: /var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7043117177/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 16:20:03] 2026-03-07 15:18:53,976 | INFO     | extracted standard info from prmon json
[2026-03-07 16:20:03] 2026-03-07 15:18:53,976 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 16:20:03] 2026-03-07 15:18:53,976 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 16:20:03] 2026-03-07 15:18:53,976 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 16:20:03] 2026-03-07 15:18:53,976 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 16:20:03] 2026-03-07 15:18:53,977 | INFO     | fitting pss+swap vs Time
[2026-03-07 16:20:03] 2026-03-07 15:18:53,978 | INFO     | sum of square deviations: 106336877.5
[2026-03-07 16:20:03] 2026-03-07 15:18:53,978 | INFO     | sum of deviations: 237938460.49999997
[2026-03-07 16:20:03] 2026-03-07 15:18:53,978 | INFO     | mean x: 1772894478.5
[2026-03-07 16:20:03] 2026-03-07 15:18:53,978 | INFO     | mean y: 2333426.9
[2026-03-07 16:20:03] 2026-03-07 15:18:53,978 | INFO     | intersect: -3964679642.8907723
[2026-03-07 16:20:03] 2026-03-07 15:18:53,978 | INFO     | chi2: 7.202834551639198e-05
[2026-03-07 16:20:03] 2026-03-07 15:18:53,978 | INFO     | current memory leak: 2.24 B/s (using 70 data points, chi2=0.00)
[2026-03-07 16:20:03] 2026-03-07 15:18:53,978 | INFO     | could have reported an average CPU frequency of 3591 MHz (6 samples)
[2026-03-07 16:20:03] 2026-03-07 15:18:53,978 | INFO     | ..............................
[2026-03-07 16:20:03] 2026-03-07 15:18:53,978 | INFO     | . Timing measurements:
[2026-03-07 16:20:03] 2026-03-07 15:18:53,978 | INFO     | . get job = 0 s
[2026-03-07 16:20:03] 2026-03-07 15:18:53,978 | INFO     | . initial setup = 4 s
[2026-03-07 16:20:03] 2026-03-07 15:18:53,978 | INFO     | . payload setup = 4 s
[2026-03-07 16:20:03] 2026-03-07 15:18:53,978 | INFO     | . stage-in = 0 s
[2026-03-07 16:20:03] 2026-03-07 15:18:53,979 | INFO     | . payload execution = 4661 s
[2026-03-07 16:20:03] 2026-03-07 15:18:53,979 | INFO     | . stage-out = 0 s
[2026-03-07 16:20:03] 2026-03-07 15:18:53,979 | INFO     | . log creation = 0 s
[2026-03-07 16:20:03] 2026-03-07 15:18:53,979 | INFO     | ..............................
[2026-03-07 16:20:03] 2026-03-07 15:18:54,055 | INFO     | 
[2026-03-07 16:20:03] 2026-03-07 15:18:54,058 | INFO     | job summary report
[2026-03-07 16:20:03] 2026-03-07 15:18:54,058 | INFO     | --------------------------------------------------
[2026-03-07 16:20:03] 2026-03-07 15:18:54,058 | INFO     | PanDA job id: 7043117177
[2026-03-07 16:20:03] 2026-03-07 15:18:54,058 | INFO     | task id: 48958651
[2026-03-07 16:20:03] 2026-03-07 15:18:54,058 | INFO     | errors: (none)
[2026-03-07 16:20:03] 2026-03-07 15:18:54,058 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 16:20:03] 2026-03-07 15:18:54,058 | INFO     | pilot state: finished 
[2026-03-07 16:20:03] 2026-03-07 15:18:54,058 | INFO     | transexitcode: 0
[2026-03-07 16:20:03] 2026-03-07 15:18:54,058 | INFO     | exeerrorcode: 0
[2026-03-07 16:20:03] 2026-03-07 15:18:54,058 | INFO     | exeerrordiag: 
[2026-03-07 16:20:03] 2026-03-07 15:18:54,058 | INFO     | exitcode: 0
[2026-03-07 16:20:03] 2026-03-07 15:18:54,058 | INFO     | exitmsg: OK
[2026-03-07 16:20:03] 2026-03-07 15:18:54,058 | INFO     | cpuconsumptiontime: 17824 s
[2026-03-07 16:20:03] 2026-03-07 15:18:54,058 | INFO     | nevents: 400
[2026-03-07 16:20:03] 2026-03-07 15:18:54,058 | INFO     | neventsw: 0
[2026-03-07 16:20:03] 2026-03-07 15:18:54,058 | INFO     | pid: 1406355
[2026-03-07 16:20:03] 2026-03-07 15:18:54,058 | INFO     | pgrp: 1406355
[2026-03-07 16:20:03] 2026-03-07 15:18:54,058 | INFO     | corecount: 4
[2026-03-07 16:20:03] 2026-03-07 15:18:54,058 | INFO     | event service: False
[2026-03-07 16:20:03] 2026-03-07 15:18:54,058 | INFO     | sizes: {0: 2295864, 11: 2295864, 4669: 2322130, 4670: 2322129, 4671: 2331205, 4674: 2331583}
[2026-03-07 16:20:03] 2026-03-07 15:18:54,058 | INFO     | --------------------------------------------------
[2026-03-07 16:20:03] 2026-03-07 15:18:54,058 | INFO     | 
[2026-03-07 16:20:03] 2026-03-07 15:18:54,058 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot80/slots/2
[2026-03-07 16:20:03] 2026-03-07 15:18:54,213 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 16:20:03] 2026-03-07 15:18:54,213 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 16:20:03] 2026-03-07 15:18:54,213 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 16:20:03] 2026-03-07 15:18:54,213 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 16:20:03] 2026-03-07 15:18:54,213 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 16:20:03] 2026-03-07 15:18:54,213 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 16:20:03] 2026-03-07 15:18:54,213 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 16:20:03] 2026-03-07 15:18:54,213 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 16:20:03] 2026-03-07 15:18:54,213 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 16:20:03] 2026-03-07 15:18:54,213 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 16:20:03] 2026-03-07 15:18:54,213 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 16:20:03] 2026-03-07 15:18:54,213 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 16:20:03] 2026-03-07 15:18:54,213 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 16:20:03] 2026-03-07 15:18:54,213 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 16:20:03] 2026-03-07 15:18:54,214 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 16:20:03] 2026-03-07 15:18:54,214 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 16:20:03] 2026-03-07 15:18:54,214 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 16:20:03] 2026-03-07 15:18:54,214 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 16:20:03] 2026-03-07 15:18:54,214 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 16:20:03] 2026-03-07 15:18:54,214 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 16:20:03] 2026-03-07 15:18:54,214 | INFO     | job 7043117177 has completed (purged errors)
[2026-03-07 16:20:03] 2026-03-07 15:18:54,214 | INFO     | overall cleanup function is called
[2026-03-07 16:20:03] 2026-03-07 15:18:54,360 | INFO     | number of running child processes to parent process 1406355: 1
[2026-03-07 16:20:03] 2026-03-07 15:18:54,360 | INFO     | maximum number of monitored processes: 6
[2026-03-07 16:20:03] 2026-03-07 15:18:54,360 | INFO     | aborting job monitoring since job object (job id=7043117177) has expired
[2026-03-07 16:20:03] 2026-03-07 15:18:55,221 | INFO     | --- collectZombieJob: --- 10, [1406355]
[2026-03-07 16:20:03] 2026-03-07 15:18:55,222 | INFO     | zombie collector waiting for pid 1406355
[2026-03-07 16:20:03] 2026-03-07 15:18:55,222 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 16:20:03] 2026-03-07 15:18:55,222 | INFO     | collected zombie processes
[2026-03-07 16:20:03] 2026-03-07 15:18:55,222 | INFO     | will attempt to kill all subprocesses of pid=1406355
[2026-03-07 16:20:03] 2026-03-07 15:18:55,822 | INFO     | process IDs to be killed: [1406355] (in reverse order)
[2026-03-07 16:20:03] 2026-03-07 15:18:56,228 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 16:20:03] 2026-03-07 15:18:56,228 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 16:20:03] 2026-03-07 15:18:56,265 | INFO     | did not find any defunct processes belonging to 1406355
[2026-03-07 16:20:03] 2026-03-07 15:18:56,311 | INFO     | did not find any defunct processes belonging to 1406355
[2026-03-07 16:20:03] 2026-03-07 15:18:56,314 | INFO     | ready for new job
[2026-03-07 16:20:03] 2026-03-07 15:18:56,315 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 16:20:03] 2026-03-07 15:18:56,316 | INFO     | **************************************
[2026-03-07 16:20:03] 2026-03-07 15:18:56,316 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 16:20:03] 2026-03-07 15:18:56,316 | INFO     | **************************************
[2026-03-07 16:20:03] 2026-03-07 15:18:56,316 | INFO     | 
[2026-03-07 16:20:03] 2026-03-07 15:18:56,322 | INFO     | architecture information:
[2026-03-07 16:20:03] 2026-03-07 15:18:56,325 | INFO     | executing command: cat /etc/os-release
[2026-03-07 16:20:03] 2026-03-07 15:18:56,361 | INFO     | cat /etc/os-release:
[2026-03-07 16:20:03] NAME="CentOS Linux"
[2026-03-07 16:20:03] VERSION="7 (Core)"
[2026-03-07 16:20:03] ID="centos"
[2026-03-07 16:20:03] ID_LIKE="rhel fedora"
[2026-03-07 16:20:03] VERSION_ID="7"
[2026-03-07 16:20:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 16:20:03] ANSI_COLOR="0;31"
[2026-03-07 16:20:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 16:20:03] HOME_URL="https://www.centos.org/"
[2026-03-07 16:20:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 16:20:03] 
[2026-03-07 16:20:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 16:20:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 16:20:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 16:20:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 16:20:03] 
[2026-03-07 16:20:03] 2026-03-07 15:18:56,361 | INFO     | **************************************
[2026-03-07 16:20:03] 2026-03-07 15:18:56,865 | INFO     | executing command: df -mP /var/lib/boinc/var/slot80/slots/2
[2026-03-07 16:20:03] 2026-03-07 15:18:56,888 | INFO     | sufficient remaining disk space (20915945472 B)
[2026-03-07 16:20:03] 2026-03-07 15:18:56,889 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 16:20:03] 2026-03-07 15:18:56,889 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 16:20:03] 2026-03-07 15:18:56,889 | INFO     | update_server=False
[2026-03-07 16:20:03] 2026-03-07 15:18:56,889 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 16:20:03] 2026-03-07 15:18:56,889 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 16:20:03] 2026-03-07 15:18:57,183 | INFO     | all data control threads have been joined
[2026-03-07 16:20:03] 2026-03-07 15:18:57,450 | INFO     | all job control threads have been joined
[2026-03-07 16:20:03] 2026-03-07 15:18:57,875 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 16:20:03] 2026-03-07 15:18:57,876 | INFO     | aborting loop
[2026-03-07 16:20:03] 2026-03-07 15:18:57,894 | INFO     | [job] retrieve thread has finished
[2026-03-07 16:20:03] 2026-03-07 15:18:58,170 | INFO     | all payload control threads have been joined
[2026-03-07 16:20:03] 2026-03-07 15:18:58,191 | INFO     | [data] control thread has finished
[2026-03-07 16:20:03] 2026-03-07 15:18:58,279 | INFO     | [job] validate thread has finished
[2026-03-07 16:20:03] 2026-03-07 15:18:58,302 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 16:20:03] 2026-03-07 15:18:58,344 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 16:20:03] 2026-03-07 15:18:58,427 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 16:20:03] 2026-03-07 15:18:58,456 | INFO     | [job] control thread has finished
[2026-03-07 16:20:03] 2026-03-07 15:18:58,654 | INFO     | [payload] failed_post thread has finished
[2026-03-07 16:20:03] 2026-03-07 15:18:58,704 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 16:20:03] 2026-03-07 15:18:58,778 | INFO     | [data] copytool_in thread has finished
[2026-03-07 16:20:03] 2026-03-07 15:18:58,870 | INFO     | [payload] validate_post thread has finished
[2026-03-07 16:20:03] 2026-03-07 15:18:58,882 | INFO     | [job] job monitor thread has finished
[2026-03-07 16:20:03] 2026-03-07 15:18:58,895 | INFO     | [data] copytool_out thread has finished
[2026-03-07 16:20:03] 2026-03-07 15:18:59,070 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 16:20:03] 2026-03-07 15:18:59,176 | INFO     | [payload] control thread has finished
[2026-03-07 16:20:03] 2026-03-07 15:18:59,969 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 16:20:03] 2026-03-07 15:19:00,076 | INFO     | [job] queue monitor thread has finished
[2026-03-07 16:20:03] 2026-03-07 15:19:03,986 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 16:20:03] 2026-03-07 15:19:26,110 | INFO     | PID=1388219 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 16:20:03] 2026-03-07 15:19:26,114 | INFO     | .. there are 55 such processes running
[2026-03-07 16:20:03] 2026-03-07 15:19:26,121 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 16:20:03] 2026-03-07 15:19:26,121 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 16:20:03] 2026-03-07 15:19:26,122 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 16:20:03] 2026-03-07 15:19:56,474 | INFO     | [monitor] cgroup control has ended
[2026-03-07 16:20:03] 2026-03-07 15:19:57,958 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22452476540736)>', '<ExcThread(monitor, started 22452238563072)>']
[2026-03-07 16:20:03] 2026-03-07 15:19:58,313 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 16:20:03] 2026-03-07 15:19:58,314 | INFO     | [monitor] control thread has ended
[2026-03-07 16:20:03] 2026-03-07 15:20:02,984 | INFO     | all workflow threads have been joined
[2026-03-07 16:20:03] 2026-03-07 15:20:02,985 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 16:20:03] 2026-03-07 15:20:02,985 | INFO     | traces error code: 0
[2026-03-07 16:20:03] 2026-03-07 15:20:02,985 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 16:20:03] 2026-03-07 15:20:03,187 [wrapper] ==== pilot stdout END ====
[2026-03-07 16:20:03] 2026-03-07 15:20:03,197 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 16:20:03] 2026-03-07 15:20:03,208 [wrapper] pilotpid: 1388219
[2026-03-07 16:20:03] 2026-03-07 15:20:03,211 [wrapper] Pilot exit status: 0
[2026-03-07 16:20:03] 2026-03-07 15:20:03,269 [wrapper] pandaids: 7043117177
[2026-03-07 16:20:03] 2026-03-07 15:20:03,507 [wrapper] cleanup supervisor_pilot 2217027 1388220
[2026-03-07 16:20:03] 2026-03-07 15:20:03,514 [wrapper] Test setup, not cleaning
[2026-03-07 16:20:03] 2026-03-07 15:20:03,523 [wrapper] apfmon messages muted
[2026-03-07 16:20:03] 2026-03-07 15:20:03,527 [wrapper] ==== wrapper stdout END ====
[2026-03-07 16:20:03] 2026-03-07 15:20:03,530 [wrapper] ==== wrapper stderr END ====
[2026-03-07 16:20:03]  *** Error codes and diagnostics ***
[2026-03-07 16:20:03]     "exeErrorCode": 0,
[2026-03-07 16:20:03]     "exeErrorDiag": "",
[2026-03-07 16:20:03]     "pilotErrorCode": 0,
[2026-03-07 16:20:03]     "pilotErrorDiag": "",
[2026-03-07 16:20:03]  *** Listing of results directory ***
[2026-03-07 16:20:03] total 427624
[2026-03-07 16:20:03] -rw-r--r--. 1 boinc boinc    584627 Mar  6 12:48 pilot3.tar.gz
[2026-03-07 16:20:03] -rw-r--r--. 1 boinc boinc      5111 Mar  6 12:49 queuedata.json
[2026-03-07 16:20:03] -rwx------. 1 boinc boinc     36322 Mar  6 12:50 runpilot2-wrapper.sh
[2026-03-07 16:20:03] -rw-r--r--. 1 boinc boinc       100 Mar  7 15:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 16:20:03] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 15:00 run_atlas
[2026-03-07 16:20:03] -rw-r--r--. 1 boinc boinc       105 Mar  7 15:00 job.xml
[2026-03-07 16:20:03] -rw-r--r--. 1 boinc boinc      6706 Mar  7 15:00 init_data.xml
[2026-03-07 16:20:03] -rw-r--r--. 2 boinc boinc 261083083 Mar  7 15:00 EVNT.48958649._000066.pool.root.1
[2026-03-07 16:20:03] -rw-r--r--. 2 boinc boinc     15845 Mar  7 15:00 start_atlas.sh
[2026-03-07 16:20:03] drwxrwx--x. 2 boinc boinc      4096 Mar  7 15:00 shared
[2026-03-07 16:20:03] -rw-r--r--. 2 boinc boinc    597982 Mar  7 15:00 input.tar.gz
[2026-03-07 16:20:03] -rw-r--r--. 1 boinc boinc         0 Mar  7 15:00 boinc_lockfile
[2026-03-07 16:20:03] -rw-r--r--. 1 boinc boinc      2619 Mar  7 15:00 pandaJob.out
[2026-03-07 16:20:03] -rw-------. 1 boinc boinc    999177 Mar  7 15:00 agis_schedconf.cvmfs.json
[2026-03-07 16:20:03] -rw-------. 1 boinc boinc   1521291 Mar  7 15:00 agis_ddmendpoints.agis.ALL.json
[2026-03-07 16:20:03] -rw-------. 1 boinc boinc       443 Mar  7 15:00 workernode_map.json
[2026-03-07 16:20:03] drwx------. 5 boinc boinc      4096 Mar  7 15:00 pilot3
[2026-03-07 16:20:03] -rw-------. 1 boinc boinc 170983051 Mar  7 16:18 HITS.48958651._001675.pool.root.1
[2026-03-07 16:20:03] -rw-------. 1 boinc boinc      1031 Mar  7 16:18 memory_monitor_summary.json
[2026-03-07 16:20:03] -rw-------. 1 boinc boinc    252204 Mar  7 16:18 log.48958651._001675.job.log.tgz.1
[2026-03-07 16:20:03] -rw-r--r--. 1 boinc boinc       530 Mar  7 16:18 boinc_task_state.xml
[2026-03-07 16:20:03] -rw-------. 1 boinc boinc      6344 Mar  7 16:18 heartbeat.json
[2026-03-07 16:20:03] -rw-------. 1 boinc boinc        95 Mar  7 16:19 pilot_heartbeat.json
[2026-03-07 16:20:03] -rw-r--r--. 1 boinc boinc      8192 Mar  7 16:19 boinc_mmap_file
[2026-03-07 16:20:03] -rw-r--r--. 1 boinc boinc        27 Mar  7 16:19 wrapper_checkpoint.txt
[2026-03-07 16:20:03] -rw-------. 1 boinc boinc      4829 Mar  7 16:20 pilotlog.txt
[2026-03-07 16:20:03] -rw-------. 1 boinc boinc    688144 Mar  7 16:20 log.48958651._001675.job.log.1
[2026-03-07 16:20:03] -rw-------. 1 boinc boinc       357 Mar  7 16:20 output.list
[2026-03-07 16:20:03] -rw-r--r--. 1 boinc boinc       620 Mar  7 16:20 runtime_log
[2026-03-07 16:20:03] -rw-------. 1 boinc boinc    962560 Mar  7 16:20 result.tar.gz
[2026-03-07 16:20:03] -rw-r--r--. 1 boinc boinc      9204 Mar  7 16:20 runtime_log.err
[2026-03-07 16:20:03] -rw-------. 1 boinc boinc       662 Mar  7 16:20 dXgNDm2riI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmQfPLDm7rfFZn.diag
[2026-03-07 16:20:03] -rw-r--r--. 1 boinc boinc     21494 Mar  7 16:20 stderr.txt
[2026-03-07 16:20:03] HITS file was successfully produced:
[2026-03-07 16:20:03] -rw-------. 1 boinc boinc 170983051 Mar  7 16:18 shared/HITS.pool.root.1
[2026-03-07 16:20:03]  *** Contents of shared directory: ***
[2026-03-07 16:20:03] total 423488
[2026-03-07 16:20:03] -rw-r--r--. 2 boinc boinc 261083083 Mar  7 15:00 ATLAS.root_0
[2026-03-07 16:20:03] -rw-r--r--. 2 boinc boinc     15845 Mar  7 15:00 start_atlas.sh
[2026-03-07 16:20:03] -rw-r--r--. 2 boinc boinc    597982 Mar  7 15:00 input.tar.gz
[2026-03-07 16:20:03] -rw-------. 1 boinc boinc 170983051 Mar  7 16:18 HITS.pool.root.1
[2026-03-07 16:20:03] -rw-------. 1 boinc boinc    962560 Mar  7 16:20 result.tar.gz
16:20:05 (1381352): run_atlas exited; CPU time 18008.600802
16:20:05 (1381352): called boinc_finish(0)

</stderr_txt>
]]>

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