Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:35:56 (2414761): wrapper (7.7.26015): starting
03:35:56 (2414761): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 03:35:56] Arguments: --nthreads 4
[2026-03-08 03:35:56] Threads: 4
[2026-03-08 03:35:56] Checking for CVMFS
[2026-03-08 03:35:56] No cvmfs_config command found, will try listing directly
[2026-03-08 03:35:56] CVMFS is ok
[2026-03-08 03:35:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 03:35:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 03:35:56] Further information can be found at the LHC@home message board.
[2026-03-08 03:35:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 03:35:56] Checking for apptainer binary...
[2026-03-08 03:35:56] which: no apptainer in ((null))
[2026-03-08 03:35:56] apptainer is not installed, using version from CVMFS
[2026-03-08 03:35:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 03:35:56] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-03-08 03:35:56] apptainer works
[2026-03-08 03:35:56] Set ATHENA_PROC_NUMBER=4
[2026-03-08 03:35:56] Set ATHENA_CORE_NUMBER=4
[2026-03-08 03:35:56] Starting ATLAS job with PandaID=7043028662
[2026-03-08 03:35:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 07:57:45]  *** The last 200 lines of the pilot log: ***
[2026-03-08 07:57:45] 2026-03-08 06:56:51,262 | INFO     | job 7043028662 has state=finished
[2026-03-08 07:57:45] 2026-03-08 06:56:51,262 | INFO     | preparing for final server update for job 7043028662 in state='finished'
[2026-03-08 07:57:45] 2026-03-08 06:56:51,263 | INFO     | reading metadata from: /var/lib/boinc/var/slot52/slots/0/PanDA_Pilot-7043028662/jobReport.json
[2026-03-08 07:57:45] 2026-03-08 06:56:51,265 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot52/slots/0/workernode_map.json
[2026-03-08 07:57:45] 2026-03-08 06:56:51,265 | INFO     | this job has now completed (state=finished)
[2026-03-08 07:57:45] 2026-03-08 06:56:51,266 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 07:57:45] 2026-03-08 06:56:51,266 | INFO     | log transfer has been attempted: DONE
[2026-03-08 07:57:45] 2026-03-08 06:56:51,266 | INFO     | job 7043028662 has finished - writing final server update
[2026-03-08 07:57:45] 2026-03-08 06:56:51,266 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_40923/.job.ad'
[2026-03-08 07:57:45] 2026-03-08 06:56:51,266 | INFO     | total number of processed events: 400 (read)
[2026-03-08 07:57:45] 2026-03-08 06:56:51,279 | INFO     | using path: /var/lib/boinc/var/slot52/slots/0/PanDA_Pilot-7043028662/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 07:57:45] 2026-03-08 06:56:51,280 | INFO     | extracted standard info from prmon json
[2026-03-08 07:57:45] 2026-03-08 06:56:51,280 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 07:57:45] 2026-03-08 06:56:51,280 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 07:57:45] 2026-03-08 06:56:51,280 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 07:57:45] 2026-03-08 06:56:51,280 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 07:57:45] 2026-03-08 06:56:51,285 | INFO     | fitting pss+swap vs Time
[2026-03-08 07:57:45] 2026-03-08 06:56:51,286 | INFO     | sum of square deviations: 5202259401.996094
[2026-03-08 07:57:45] 2026-03-08 06:56:51,287 | INFO     | sum of deviations: 33782832435.492188
[2026-03-08 07:57:45] 2026-03-08 06:56:51,288 | INFO     | mean x: 1772945173.5039062
[2026-03-08 07:57:45] 2026-03-08 06:56:51,288 | INFO     | mean y: 2322253.5078125
[2026-03-08 07:57:45] 2026-03-08 06:56:51,288 | INFO     | intersect: -11510965548.099213
[2026-03-08 07:57:45] 2026-03-08 06:56:51,288 | INFO     | chi2: 1.3896524328494597
[2026-03-08 07:57:45] 2026-03-08 06:56:51,289 | INFO     | sum of square deviations: 4903351776.995999
[2026-03-08 07:57:45] 2026-03-08 06:56:51,291 | INFO     | sum of deviations: 33059714465.49005
[2026-03-08 07:57:45] 2026-03-08 06:56:51,291 | INFO     | mean x: 1772945021.003984
[2026-03-08 07:57:45] 2026-03-08 06:56:51,291 | INFO     | mean y: 2321884.509960159
[2026-03-08 07:57:45] 2026-03-08 06:56:51,291 | INFO     | intersect: -11951349567.819084
[2026-03-08 07:57:45] 2026-03-08 06:56:51,292 | INFO     | chi2: 1.3901466433611536
[2026-03-08 07:57:45] 2026-03-08 06:56:51,292 | INFO     | current chi2=1.3901466433611536 (change=-0.035563605690991255 %)
[2026-03-08 07:57:45] 2026-03-08 06:56:51,292 | INFO     | right removable region: 250
[2026-03-08 07:57:45] 2026-03-08 06:56:51,292 | INFO     | sum of square deviations: 4903351166.995999
[2026-03-08 07:57:45] 2026-03-08 06:56:51,294 | INFO     | sum of deviations: -1169642635.7251022
[2026-03-08 07:57:45] 2026-03-08 06:56:51,294 | INFO     | mean x: 1772945326.003984
[2026-03-08 07:57:45] 2026-03-08 06:56:51,294 | INFO     | mean y: 2339919.725099602
[2026-03-08 07:57:45] 2026-03-08 06:56:51,294 | INFO     | intersect: 425257302.853146
[2026-03-08 07:57:45] 2026-03-08 06:56:51,295 | INFO     | chi2: 0.013525423516082973
[2026-03-08 07:57:45] 2026-03-08 06:56:51,295 | INFO     | current chi2=0.013525423516082973 (change=99.02670457760799 %)
[2026-03-08 07:57:45] 2026-03-08 06:56:51,295 | INFO     | sum of square deviations: 4616117569.49596
[2026-03-08 07:57:45] 2026-03-08 06:56:51,297 | INFO     | sum of deviations: -1664868125.3333354
[2026-03-08 07:57:45] 2026-03-08 06:56:51,297 | INFO     | mean x: 1772945478.504065
[2026-03-08 07:57:45] 2026-03-08 06:56:51,297 | INFO     | mean y: 2340172.8333333335
[2026-03-08 07:57:45] 2026-03-08 06:56:51,297 | INFO     | intersect: 641778049.0739028
[2026-03-08 07:57:45] 2026-03-08 06:56:51,298 | INFO     | chi2: 0.010696686025537677
[2026-03-08 07:57:45] 2026-03-08 06:56:51,298 | INFO     | current chi2=0.010696686025537677 (change=20.914224883100093 %)
[2026-03-08 07:57:45] 2026-03-08 06:56:51,298 | INFO     | left removable region: 20
[2026-03-08 07:57:45] 2026-03-08 06:56:51,298 | INFO     | sum of square deviations: 3772715465.495652
[2026-03-08 07:57:45] 2026-03-08 06:56:51,300 | INFO     | sum of deviations: 1018490967.478261
[2026-03-08 07:57:45] 2026-03-08 06:56:51,300 | INFO     | mean x: 1772945600.5043478
[2026-03-08 07:57:45] 2026-03-08 06:56:51,300 | INFO     | mean y: 2338536.5217391304
[2026-03-08 07:57:45] 2026-03-08 06:56:51,300 | INFO     | intersect: -476289946.4525968
[2026-03-08 07:57:45] 2026-03-08 06:56:51,301 | INFO     | chi2: 0.007963184712339321
[2026-03-08 07:57:45] 2026-03-08 06:56:51,301 | INFO     | current memory leak: 0.27 B/s (using 230 data points, chi2=0.01)
[2026-03-08 07:57:45] 2026-03-08 06:56:51,301 | INFO     | could have reported an average CPU frequency of 2565 MHz (12 samples)
[2026-03-08 07:57:45] 2026-03-08 06:56:51,302 | INFO     | ..............................
[2026-03-08 07:57:45] 2026-03-08 06:56:51,302 | INFO     | . Timing measurements:
[2026-03-08 07:57:45] 2026-03-08 06:56:51,302 | INFO     | . get job = 0 s
[2026-03-08 07:57:45] 2026-03-08 06:56:51,302 | INFO     | . initial setup = 6 s
[2026-03-08 07:57:45] 2026-03-08 06:56:51,302 | INFO     | . payload setup = 6 s
[2026-03-08 07:57:45] 2026-03-08 06:56:51,302 | INFO     | . stage-in = 0 s
[2026-03-08 07:57:45] 2026-03-08 06:56:51,302 | INFO     | . payload execution = 15612 s
[2026-03-08 07:57:45] 2026-03-08 06:56:51,302 | INFO     | . stage-out = 1 s
[2026-03-08 07:57:45] 2026-03-08 06:56:51,302 | INFO     | . log creation = 0 s
[2026-03-08 07:57:45] 2026-03-08 06:56:51,302 | INFO     | ..............................
[2026-03-08 07:57:45] 2026-03-08 06:56:51,407 | INFO     | 
[2026-03-08 07:57:45] 2026-03-08 06:56:51,407 | INFO     | job summary report
[2026-03-08 07:57:45] 2026-03-08 06:56:51,407 | INFO     | --------------------------------------------------
[2026-03-08 07:57:45] 2026-03-08 06:56:51,407 | INFO     | PanDA job id: 7043028662
[2026-03-08 07:57:45] 2026-03-08 06:56:51,407 | INFO     | task id: 48966988
[2026-03-08 07:57:45] 2026-03-08 06:56:51,407 | INFO     | errors: (none)
[2026-03-08 07:57:45] 2026-03-08 06:56:51,408 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 07:57:45] 2026-03-08 06:56:51,408 | INFO     | pilot state: finished 
[2026-03-08 07:57:45] 2026-03-08 06:56:51,408 | INFO     | transexitcode: 0
[2026-03-08 07:57:45] 2026-03-08 06:56:51,408 | INFO     | exeerrorcode: 0
[2026-03-08 07:57:45] 2026-03-08 06:56:51,408 | INFO     | exeerrordiag: 
[2026-03-08 07:57:45] 2026-03-08 06:56:51,408 | INFO     | exitcode: 0
[2026-03-08 07:57:45] 2026-03-08 06:56:51,408 | INFO     | exitmsg: OK
[2026-03-08 07:57:45] 2026-03-08 06:56:51,408 | INFO     | cpuconsumptiontime: 55758 s
[2026-03-08 07:57:45] 2026-03-08 06:56:51,408 | INFO     | nevents: 400
[2026-03-08 07:57:45] 2026-03-08 06:56:51,408 | INFO     | neventsw: 0
[2026-03-08 07:57:45] 2026-03-08 06:56:51,408 | INFO     | pid: 2423371
[2026-03-08 07:57:45] 2026-03-08 06:56:51,408 | INFO     | pgrp: 2423371
[2026-03-08 07:57:45] 2026-03-08 06:56:51,409 | INFO     | corecount: 4
[2026-03-08 07:57:45] 2026-03-08 06:56:51,409 | INFO     | event service: False
[2026-03-08 07:57:45] 2026-03-08 06:56:51,409 | INFO     | sizes: {0: 2295647, 1: 2295853, 11: 2295881, 15622: 2327732, 15624: 2336752, 15626: 2336808, 15627: 2337130}
[2026-03-08 07:57:45] 2026-03-08 06:56:51,409 | INFO     | --------------------------------------------------
[2026-03-08 07:57:45] 2026-03-08 06:56:51,409 | INFO     | 
[2026-03-08 07:57:45] 2026-03-08 06:56:51,409 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot52/slots/0
[2026-03-08 07:57:45] 2026-03-08 06:56:51,438 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 07:57:45] 2026-03-08 06:56:51,439 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 07:57:45] 2026-03-08 06:56:51,439 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 07:57:45] 2026-03-08 06:56:51,439 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 07:57:45] 2026-03-08 06:56:51,439 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 07:57:45] 2026-03-08 06:56:51,439 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 07:57:45] 2026-03-08 06:56:51,439 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 07:57:45] 2026-03-08 06:56:51,439 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 07:57:45] 2026-03-08 06:56:51,440 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 07:57:45] 2026-03-08 06:56:51,440 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 07:57:45] 2026-03-08 06:56:51,440 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 07:57:45] 2026-03-08 06:56:51,440 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 07:57:45] 2026-03-08 06:56:51,440 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 07:57:45] 2026-03-08 06:56:51,440 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 07:57:45] 2026-03-08 06:56:51,440 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 07:57:45] 2026-03-08 06:56:51,440 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 07:57:45] 2026-03-08 06:56:51,440 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 07:57:45] 2026-03-08 06:56:51,440 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 07:57:45] 2026-03-08 06:56:51,440 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 07:57:45] 2026-03-08 06:56:51,441 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 07:57:45] 2026-03-08 06:56:51,441 | INFO     | job 7043028662 has completed (purged errors)
[2026-03-08 07:57:45] 2026-03-08 06:56:51,441 | INFO     | overall cleanup function is called
[2026-03-08 07:57:45] 2026-03-08 06:56:52,449 | INFO     | --- collectZombieJob: --- 10, [2423371]
[2026-03-08 07:57:45] 2026-03-08 06:56:52,449 | INFO     | zombie collector waiting for pid 2423371
[2026-03-08 07:57:45] 2026-03-08 06:56:52,449 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 07:57:45] 2026-03-08 06:56:52,449 | INFO     | collected zombie processes
[2026-03-08 07:57:45] 2026-03-08 06:56:52,449 | INFO     | will attempt to kill all subprocesses of pid=2423371
[2026-03-08 07:57:45] 2026-03-08 06:56:52,906 | INFO     | process IDs to be killed: [2423371] (in reverse order)
[2026-03-08 07:57:45] 2026-03-08 06:56:53,083 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 07:57:45] 2026-03-08 06:56:53,084 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 07:57:45] 2026-03-08 06:56:53,097 | INFO     | did not find any defunct processes belonging to 2423371
[2026-03-08 07:57:45] 2026-03-08 06:56:53,113 | INFO     | did not find any defunct processes belonging to 2423371
[2026-03-08 07:57:45] 2026-03-08 06:56:53,114 | INFO     | ready for new job
[2026-03-08 07:57:45] 2026-03-08 06:56:53,114 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 07:57:45] 2026-03-08 06:56:53,116 | INFO     | **************************************
[2026-03-08 07:57:45] 2026-03-08 06:56:53,117 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 07:57:45] 2026-03-08 06:56:53,117 | INFO     | **************************************
[2026-03-08 07:57:45] 2026-03-08 06:56:53,117 | INFO     | 
[2026-03-08 07:57:45] 2026-03-08 06:56:53,121 | INFO     | architecture information:
[2026-03-08 07:57:45] 2026-03-08 06:56:53,121 | INFO     | executing command: cat /etc/os-release
[2026-03-08 07:57:45] 2026-03-08 06:56:53,146 | INFO     | cat /etc/os-release:
[2026-03-08 07:57:45] NAME="CentOS Linux"
[2026-03-08 07:57:45] VERSION="7 (Core)"
[2026-03-08 07:57:45] ID="centos"
[2026-03-08 07:57:45] ID_LIKE="rhel fedora"
[2026-03-08 07:57:45] VERSION_ID="7"
[2026-03-08 07:57:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 07:57:45] ANSI_COLOR="0;31"
[2026-03-08 07:57:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 07:57:45] HOME_URL="https://www.centos.org/"
[2026-03-08 07:57:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 07:57:45] 
[2026-03-08 07:57:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 07:57:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 07:57:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 07:57:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 07:57:45] 
[2026-03-08 07:57:45] 2026-03-08 06:56:53,146 | INFO     | **************************************
[2026-03-08 07:57:45] 2026-03-08 06:56:53,649 | INFO     | executing command: df -mP /var/lib/boinc/var/slot52/slots/0
[2026-03-08 07:57:45] 2026-03-08 06:56:53,668 | INFO     | sufficient remaining disk space (20444086272 B)
[2026-03-08 07:57:45] 2026-03-08 06:56:53,669 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 07:57:45] 2026-03-08 06:56:53,669 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 07:57:45] 2026-03-08 06:56:53,669 | INFO     | update_server=False
[2026-03-08 07:57:45] 2026-03-08 06:56:53,669 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 07:57:45] 2026-03-08 06:56:53,802 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 07:57:45] 2026-03-08 06:56:54,030 | INFO     | all payload control threads have been joined
[2026-03-08 07:57:45] 2026-03-08 06:56:54,332 | INFO     | all job control threads have been joined
[2026-03-08 07:57:45] 2026-03-08 06:56:54,411 | INFO     | all data control threads have been joined
[2026-03-08 07:57:45] 2026-03-08 06:56:54,654 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 07:57:45] 2026-03-08 06:56:54,654 | INFO     | aborting loop
[2026-03-08 07:57:45] 2026-03-08 06:56:54,674 | INFO     | [job] retrieve thread has finished
[2026-03-08 07:57:45] 2026-03-08 06:56:54,955 | INFO     | [payload] failed_post thread has finished
[2026-03-08 07:57:45] 2026-03-08 06:56:54,956 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 07:57:45] 2026-03-08 06:56:55,000 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 07:57:45] 2026-03-08 06:56:55,035 | INFO     | [payload] control thread has finished
[2026-03-08 07:57:45] 2026-03-08 06:56:55,337 | INFO     | [job] control thread has finished
[2026-03-08 07:57:45] 2026-03-08 06:56:55,360 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 07:57:45] 2026-03-08 06:56:55,416 | INFO     | [data] control thread has finished
[2026-03-08 07:57:45] 2026-03-08 06:56:55,471 | INFO     | [data] copytool_in thread has finished
[2026-03-08 07:57:45] 2026-03-08 06:56:55,566 | INFO     | [payload] validate_post thread has finished
[2026-03-08 07:57:45] 2026-03-08 06:56:55,659 | INFO     | [job] job monitor thread has finished
[2026-03-08 07:57:45] 2026-03-08 06:56:55,807 | INFO     | [data] copytool_out thread has finished
[2026-03-08 07:57:45] 2026-03-08 06:56:56,091 | INFO     | [job] validate thread has finished
[2026-03-08 07:57:45] 2026-03-08 06:56:56,374 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 07:57:45] 2026-03-08 06:56:56,417 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 07:57:45] 2026-03-08 06:56:57,422 | INFO     | [job] queue monitor thread has finished
[2026-03-08 07:57:45] 2026-03-08 06:57:00,379 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 07:57:45] 2026-03-08 06:57:04,679 | INFO     | job.realtimelogging is not enabled
[2026-03-08 07:57:45] 2026-03-08 06:57:05,684 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 07:57:45] 2026-03-08 06:57:24,599 | INFO     | PID=2418577 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 07:57:45] 2026-03-08 06:57:24,599 | INFO     | .. there are 14 such processes running
[2026-03-08 07:57:45] 2026-03-08 06:57:24,599 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 07:57:45] 2026-03-08 06:57:24,599 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 07:57:45] 2026-03-08 06:57:24,600 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 07:57:45] 2026-03-08 06:57:38,661 | INFO     | [monitor] cgroup control has ended
[2026-03-08 07:57:45] 2026-03-08 06:57:40,062 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23263520089920)>', '<ExcThread(monitor, started 23263216391936)>']
[2026-03-08 07:57:45] 2026-03-08 06:57:40,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 07:57:45] 2026-03-08 06:57:40,681 | INFO     | [monitor] control thread has ended
[2026-03-08 07:57:45] 2026-03-08 06:57:45,087 | INFO     | all workflow threads have been joined
[2026-03-08 07:57:45] 2026-03-08 06:57:45,087 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 07:57:45] 2026-03-08 06:57:45,087 | INFO     | traces error code: 0
[2026-03-08 07:57:45] 2026-03-08 06:57:45,087 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 07:57:45] 2026-03-08 06:57:45,237 [wrapper] ==== pilot stdout END ====
[2026-03-08 07:57:45] 2026-03-08 06:57:45,240 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 07:57:45] 2026-03-08 06:57:45,242 [wrapper] pilotpid: 2418577
[2026-03-08 07:57:45] 2026-03-08 06:57:45,245 [wrapper] Pilot exit status: 0
[2026-03-08 07:57:45] 2026-03-08 06:57:45,290 [wrapper] pandaids: 7043028662
[2026-03-08 07:57:45] 2026-03-08 06:57:45,375 [wrapper] cleanup supervisor_pilot 2733973 2418578
[2026-03-08 07:57:45] 2026-03-08 06:57:45,379 [wrapper] Test setup, not cleaning
[2026-03-08 07:57:45] 2026-03-08 06:57:45,382 [wrapper] apfmon messages muted
[2026-03-08 07:57:45] 2026-03-08 06:57:45,385 [wrapper] ==== wrapper stdout END ====
[2026-03-08 07:57:45] 2026-03-08 06:57:45,387 [wrapper] ==== wrapper stderr END ====
[2026-03-08 07:57:45]  *** Error codes and diagnostics ***
[2026-03-08 07:57:45]     "exeErrorCode": 0,
[2026-03-08 07:57:45]     "exeErrorDiag": "",
[2026-03-08 07:57:45]     "pilotErrorCode": 0,
[2026-03-08 07:57:45]     "pilotErrorDiag": "",
[2026-03-08 07:57:45]  *** Listing of results directory ***
[2026-03-08 07:57:45] total 416184
[2026-03-08 07:57:45] -rw-r--r--. 1 boinc boinc    584627 Mar  6 09:28 pilot3.tar.gz
[2026-03-08 07:57:45] -rw-r--r--. 1 boinc boinc      5111 Mar  6 09:48 queuedata.json
[2026-03-08 07:57:45] -rwx------. 1 boinc boinc     36322 Mar  6 09:48 runpilot2-wrapper.sh
[2026-03-08 07:57:45] -rw-r--r--. 1 boinc boinc       100 Mar  8 03:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 07:57:45] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 03:35 run_atlas
[2026-03-08 07:57:45] -rw-r--r--. 1 boinc boinc       105 Mar  8 03:35 job.xml
[2026-03-08 07:57:45] -rw-r--r--. 2 boinc boinc 214843217 Mar  8 03:35 EVNT.48966985._000236.pool.root.1
[2026-03-08 07:57:45] -rw-r--r--. 1 boinc boinc      6560 Mar  8 03:35 init_data.xml
[2026-03-08 07:57:45] -rw-r--r--. 2 boinc boinc     15845 Mar  8 03:35 start_atlas.sh
[2026-03-08 07:57:45] drwxrwx--x. 2 boinc boinc      4096 Mar  8 03:35 shared
[2026-03-08 07:57:45] -rw-r--r--. 2 boinc boinc    597960 Mar  8 03:35 input.tar.gz
[2026-03-08 07:57:45] -rw-r--r--. 1 boinc boinc         0 Mar  8 03:35 boinc_lockfile
[2026-03-08 07:57:45] -rw-r--r--. 1 boinc boinc      2590 Mar  8 03:35 pandaJob.out
[2026-03-08 07:57:45] -rw-------. 1 boinc boinc    999177 Mar  8 03:36 agis_schedconf.cvmfs.json
[2026-03-08 07:57:45] -rw-------. 1 boinc boinc       452 Mar  8 03:36 workernode_map.json
[2026-03-08 07:57:45] drwx------. 5 boinc boinc      4096 Mar  8 03:36 pilot3
[2026-03-08 07:57:45] -rw-------. 1 boinc boinc 202182653 Mar  8 07:56 HITS.48966988._003989.pool.root.1
[2026-03-08 07:57:45] -rw-r--r--. 1 boinc boinc       530 Mar  8 07:56 boinc_task_state.xml
[2026-03-08 07:57:45] -rw-------. 1 boinc boinc      1032 Mar  8 07:56 memory_monitor_summary.json
[2026-03-08 07:57:45] -rw-------. 1 boinc boinc        95 Mar  8 07:56 pilot_heartbeat.json
[2026-03-08 07:57:45] -rw-------. 1 boinc boinc   1521291 Mar  8 07:56 agis_ddmendpoints.agis.ALL.json
[2026-03-08 07:57:45] -rw-------. 1 boinc boinc    422173 Mar  8 07:56 log.48966988._003989.job.log.tgz.1
[2026-03-08 07:57:45] -rw-------. 1 boinc boinc      6397 Mar  8 07:56 heartbeat.json
[2026-03-08 07:57:45] -rw-r--r--. 1 boinc boinc      8192 Mar  8 07:57 boinc_mmap_file
[2026-03-08 07:57:45] -rw-r--r--. 1 boinc boinc        28 Mar  8 07:57 wrapper_checkpoint.txt
[2026-03-08 07:57:45] -rw-------. 1 boinc boinc      4901 Mar  8 07:57 pilotlog.txt
[2026-03-08 07:57:45] -rw-------. 1 boinc boinc   2183816 Mar  8 07:57 log.48966988._003989.job.log.1
[2026-03-08 07:57:45] -rw-------. 1 boinc boinc       357 Mar  8 07:57 output.list
[2026-03-08 07:57:45] -rw-r--r--. 1 boinc boinc       620 Mar  8 07:57 runtime_log
[2026-03-08 07:57:45] -rw-------. 1 boinc boinc   2621440 Mar  8 07:57 result.tar.gz
[2026-03-08 07:57:45] -rw-r--r--. 1 boinc boinc      9205 Mar  8 07:57 runtime_log.err
[2026-03-08 07:57:45] -rw-------. 1 boinc boinc       665 Mar  8 07:57 EJJLDmp2fI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmBzOLDmYHFwLn.diag
[2026-03-08 07:57:45] -rw-r--r--. 1 boinc boinc     21172 Mar  8 07:57 stderr.txt
[2026-03-08 07:57:45] HITS file was successfully produced:
[2026-03-08 07:57:45] -rw-------. 1 boinc boinc 202182653 Mar  8 07:56 shared/HITS.pool.root.1
[2026-03-08 07:57:45]  *** Contents of shared directory: ***
[2026-03-08 07:57:45] total 410420
[2026-03-08 07:57:45] -rw-r--r--. 2 boinc boinc 214843217 Mar  8 03:35 ATLAS.root_0
[2026-03-08 07:57:45] -rw-r--r--. 2 boinc boinc     15845 Mar  8 03:35 start_atlas.sh
[2026-03-08 07:57:45] -rw-r--r--. 2 boinc boinc    597960 Mar  8 03:35 input.tar.gz
[2026-03-08 07:57:45] -rw-------. 1 boinc boinc 202182653 Mar  8 07:56 HITS.pool.root.1
[2026-03-08 07:57:45] -rw-------. 1 boinc boinc   2621440 Mar  8 07:57 result.tar.gz
07:57:47 (2414761): run_atlas exited; CPU time 56462.026136
07:57:47 (2414761): called boinc_finish(0)

</stderr_txt>
]]>

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