Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:50:42 (15462): wrapper (7.7.26015): starting
02:50:42 (15462): wrapper: running run_atlas (--nthreads 8)
[2026-03-07 02:50:42] Arguments: --nthreads 8
[2026-03-07 02:50:42] Threads: 8
[2026-03-07 02:50:42] Checking for CVMFS
[2026-03-07 02:50:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 02:50:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 02:50:43] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 02:50:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 02:50:43] 2.11.2.0 820 116856 130760 156980 1 108 24856689 25165824 94 130560 161 58464887 99.853 35885475 1095 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-07 02:50:43] CVMFS is ok
[2026-03-07 02:50:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 02:50:43] Checking for apptainer binary...
[2026-03-07 02:50:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 02:50:43] Running /usr/bin/apptainer --version
[2026-03-07 02:50:43] apptainer version 1.3.2-1.el7
[2026-03-07 02:50:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 02:50:44] cg-vwn494.simple-grid.lan
[2026-03-07 02:50:44] apptainer works
[2026-03-07 02:50:44] Set ATHENA_PROC_NUMBER=8
[2026-03-07 02:50:44] Set ATHENA_CORE_NUMBER=8
[2026-03-07 02:50:45] Starting ATLAS job with PandaID=7043101782
[2026-03-07 02:50:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 07:23:48]  *** The last 200 lines of the pilot log: ***
[2026-03-07 07:23:48] 2026-03-07 06:23:03,225 | INFO     | job 7043101782 has finished - writing final server update
[2026-03-07 07:23:48] 2026-03-07 06:23:03,225 | INFO     | total number of processed events: 400 (read)
[2026-03-07 07:23:48] 2026-03-07 06:23:03,227 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-7043101782/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 07:23:48] 2026-03-07 06:23:03,228 | INFO     | extracted standard info from prmon json
[2026-03-07 07:23:48] 2026-03-07 06:23:03,228 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 07:23:48] 2026-03-07 06:23:03,228 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 07:23:48] 2026-03-07 06:23:03,228 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 07:23:48] 2026-03-07 06:23:03,228 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 07:23:48] 2026-03-07 06:23:03,233 | INFO     | fitting pss+swap vs Time
[2026-03-07 07:23:48] 2026-03-07 06:23:03,234 | INFO     | sum of square deviations: 5902093918.0
[2026-03-07 07:23:48] 2026-03-07 06:23:03,236 | INFO     | sum of deviations: -34358455691.999992
[2026-03-07 07:23:48] 2026-03-07 06:23:03,236 | INFO     | mean x: 1772856412.0
[2026-03-07 07:23:48] 2026-03-07 06:23:03,236 | INFO     | mean y: 2538769.5655430714
[2026-03-07 07:23:48] 2026-03-07 06:23:03,237 | INFO     | intersect: 10323046936.033537
[2026-03-07 07:23:48] 2026-03-07 06:23:03,237 | INFO     | chi2: 2.507570954005895
[2026-03-07 07:23:48] 2026-03-07 06:23:03,237 | INFO     | sum of square deviations: 5576683165.5
[2026-03-07 07:23:48] 2026-03-07 06:23:03,240 | INFO     | sum of deviations: -15713401719.500029
[2026-03-07 07:23:48] 2026-03-07 06:23:03,240 | INFO     | mean x: 1772856259.5
[2026-03-07 07:23:48] 2026-03-07 06:23:03,240 | INFO     | mean y: 2547379.935114504
[2026-03-07 07:23:48] 2026-03-07 06:23:03,240 | INFO     | intersect: 4997918601.451517
[2026-03-07 07:23:48] 2026-03-07 06:23:03,240 | INFO     | chi2: 1.7347252445479042
[2026-03-07 07:23:48] 2026-03-07 06:23:03,241 | INFO     | current chi2=1.7347252445479042 (change=30.820492166865876 %)
[2026-03-07 07:23:48] 2026-03-07 06:23:03,241 | INFO     | sum of square deviations: 5263458688.0
[2026-03-07 07:23:48] 2026-03-07 06:23:03,243 | INFO     | sum of deviations: -15417307262.000002
[2026-03-07 07:23:48] 2026-03-07 06:23:03,246 | INFO     | mean x: 1772856107.0
[2026-03-07 07:23:48] 2026-03-07 06:23:03,246 | INFO     | mean y: 2547524.112840467
[2026-03-07 07:23:48] 2026-03-07 06:23:03,247 | INFO     | intersect: 5195457538.823713
[2026-03-07 07:23:48] 2026-03-07 06:23:03,247 | INFO     | chi2: 1.733809703402952
[2026-03-07 07:23:48] 2026-03-07 06:23:03,247 | INFO     | current chi2=1.733809703402952 (change=0.052777299911305836 %)
[2026-03-07 07:23:48] 2026-03-07 06:23:03,247 | INFO     | right removable region: 256
[2026-03-07 07:23:48] 2026-03-07 06:23:03,248 | INFO     | sum of square deviations: 5576683165.5
[2026-03-07 07:23:48] 2026-03-07 06:23:03,250 | INFO     | sum of deviations: -75497394322.0
[2026-03-07 07:23:48] 2026-03-07 06:23:03,250 | INFO     | mean x: 1772856564.5
[2026-03-07 07:23:48] 2026-03-07 06:23:03,250 | INFO     | mean y: 2557879.5877862596
[2026-03-07 07:23:48] 2026-03-07 06:23:03,250 | INFO     | intersect: 24003571950.897724
[2026-03-07 07:23:48] 2026-03-07 06:23:03,250 | INFO     | chi2: 1.0353983230119943
[2026-03-07 07:23:48] 2026-03-07 06:23:03,251 | INFO     | current chi2=1.0353983230119943 (change=58.70911164615603 %)
[2026-03-07 07:23:48] 2026-03-07 06:23:03,251 | INFO     | sum of square deviations: 5263458688.0
[2026-03-07 07:23:48] 2026-03-07 06:23:03,253 | INFO     | sum of deviations: -71063628598.00002
[2026-03-07 07:23:48] 2026-03-07 06:23:03,253 | INFO     | mean x: 1772856717.0
[2026-03-07 07:23:48] 2026-03-07 06:23:03,254 | INFO     | mean y: 2555699.8365758755
[2026-03-07 07:23:48] 2026-03-07 06:23:03,254 | INFO     | intersect: 23938457691.73184
[2026-03-07 07:23:48] 2026-03-07 06:23:03,254 | INFO     | chi2: 1.0241310505613157
[2026-03-07 07:23:48] 2026-03-07 06:23:03,254 | INFO     | current chi2=1.0241310505613157 (change=1.0882065578300226 %)
[2026-03-07 07:23:48] 2026-03-07 06:23:03,254 | INFO     | left removable region: 20
[2026-03-07 07:23:48] 2026-03-07 06:23:03,255 | INFO     | sum of square deviations: 4075741535.0
[2026-03-07 07:23:48] 2026-03-07 06:23:03,257 | INFO     | sum of deviations: -36194421766.49997
[2026-03-07 07:23:48] 2026-03-07 06:23:03,257 | INFO     | mean x: 1772856686.5
[2026-03-07 07:23:48] 2026-03-07 06:23:03,257 | INFO     | mean y: 2557061.5381355933
[2026-03-07 07:23:48] 2026-03-07 06:23:03,257 | INFO     | intersect: 15746323463.727476
[2026-03-07 07:23:48] 2026-03-07 06:23:03,258 | INFO     | chi2: 0.20468790555718244
[2026-03-07 07:23:48] 2026-03-07 06:23:03,258 | INFO     | current memory leak: -8.88 B/s (using 236 data points, chi2=0.20)
[2026-03-07 07:23:48] 2026-03-07 06:23:03,258 | INFO     | could have reported an average CPU frequency of 2249 MHz (13 samples)
[2026-03-07 07:23:48] 2026-03-07 06:23:03,259 | INFO     | ..............................
[2026-03-07 07:23:48] 2026-03-07 06:23:03,259 | INFO     | . Timing measurements:
[2026-03-07 07:23:48] 2026-03-07 06:23:03,259 | INFO     | . get job = 0 s
[2026-03-07 07:23:48] 2026-03-07 06:23:03,259 | INFO     | . initial setup = 8 s
[2026-03-07 07:23:48] 2026-03-07 06:23:03,259 | INFO     | . payload setup = 9 s
[2026-03-07 07:23:48] 2026-03-07 06:23:03,259 | INFO     | . stage-in = 0 s
[2026-03-07 07:23:48] 2026-03-07 06:23:03,259 | INFO     | . payload execution = 16280 s
[2026-03-07 07:23:48] 2026-03-07 06:23:03,259 | INFO     | . stage-out = 3 s
[2026-03-07 07:23:48] 2026-03-07 06:23:03,259 | INFO     | . log creation = 1 s
[2026-03-07 07:23:48] 2026-03-07 06:23:03,260 | INFO     | ..............................
[2026-03-07 07:23:48] 2026-03-07 06:23:03,371 | INFO     | 
[2026-03-07 07:23:48] 2026-03-07 06:23:03,372 | INFO     | job summary report
[2026-03-07 07:23:48] 2026-03-07 06:23:03,372 | INFO     | --------------------------------------------------
[2026-03-07 07:23:48] 2026-03-07 06:23:03,372 | INFO     | PanDA job id: 7043101782
[2026-03-07 07:23:48] 2026-03-07 06:23:03,372 | INFO     | task id: 48958554
[2026-03-07 07:23:48] 2026-03-07 06:23:03,372 | INFO     | errors: (none)
[2026-03-07 07:23:48] 2026-03-07 06:23:03,372 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 07:23:48] 2026-03-07 06:23:03,372 | INFO     | pilot state: finished 
[2026-03-07 07:23:48] 2026-03-07 06:23:03,372 | INFO     | transexitcode: 0
[2026-03-07 07:23:48] 2026-03-07 06:23:03,372 | INFO     | exeerrorcode: 0
[2026-03-07 07:23:48] 2026-03-07 06:23:03,372 | INFO     | exeerrordiag: 
[2026-03-07 07:23:48] 2026-03-07 06:23:03,373 | INFO     | exitcode: 0
[2026-03-07 07:23:48] 2026-03-07 06:23:03,373 | INFO     | exitmsg: OK
[2026-03-07 07:23:48] 2026-03-07 06:23:03,373 | INFO     | cpuconsumptiontime: 62136 s
[2026-03-07 07:23:48] 2026-03-07 06:23:03,373 | INFO     | nevents: 400
[2026-03-07 07:23:48] 2026-03-07 06:23:03,373 | INFO     | neventsw: 0
[2026-03-07 07:23:48] 2026-03-07 06:23:03,373 | INFO     | pid: 23779
[2026-03-07 07:23:48] 2026-03-07 06:23:03,373 | INFO     | pgrp: 23779
[2026-03-07 07:23:48] 2026-03-07 06:23:03,373 | INFO     | corecount: 8
[2026-03-07 07:23:48] 2026-03-07 06:23:03,373 | INFO     | event service: False
[2026-03-07 07:23:48] 2026-03-07 06:23:03,374 | INFO     | sizes: {0: 2295540, 1: 2295746, 11: 2295774, 16293: 2327182, 16294: 2327181, 16298: 2336235, 16300: 2336419, 16302: 2336613}
[2026-03-07 07:23:48] 2026-03-07 06:23:03,374 | INFO     | --------------------------------------------------
[2026-03-07 07:23:48] 2026-03-07 06:23:03,374 | INFO     | 
[2026-03-07 07:23:48] 2026-03-07 06:23:03,374 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-03-07 07:23:48] 2026-03-07 06:23:03,930 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 07:23:48] 2026-03-07 06:23:03,930 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 07:23:48] 2026-03-07 06:23:03,930 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 07:23:48] 2026-03-07 06:23:03,930 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 07:23:48] 2026-03-07 06:23:03,930 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 07:23:48] 2026-03-07 06:23:03,930 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 07:23:48] 2026-03-07 06:23:03,931 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 07:23:48] 2026-03-07 06:23:03,931 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 07:23:48] 2026-03-07 06:23:03,931 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 07:23:48] 2026-03-07 06:23:03,931 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 07:23:48] 2026-03-07 06:23:03,931 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 07:23:48] 2026-03-07 06:23:03,931 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 07:23:48] 2026-03-07 06:23:03,931 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 07:23:48] 2026-03-07 06:23:03,931 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 07:23:48] 2026-03-07 06:23:03,931 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 07:23:48] 2026-03-07 06:23:03,932 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 07:23:48] 2026-03-07 06:23:03,932 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 07:23:48] 2026-03-07 06:23:03,932 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 07:23:48] 2026-03-07 06:23:03,932 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 07:23:48] 2026-03-07 06:23:03,932 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 07:23:48] 2026-03-07 06:23:03,932 | INFO     | job 7043101782 has completed (purged errors)
[2026-03-07 07:23:48] 2026-03-07 06:23:03,932 | INFO     | overall cleanup function is called
[2026-03-07 07:23:48] 2026-03-07 06:23:04,941 | INFO     | --- collectZombieJob: --- 10, [23779]
[2026-03-07 07:23:48] 2026-03-07 06:23:04,942 | INFO     | zombie collector waiting for pid 23779
[2026-03-07 07:23:48] 2026-03-07 06:23:04,942 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 07:23:48] 2026-03-07 06:23:04,942 | INFO     | collected zombie processes
[2026-03-07 07:23:48] 2026-03-07 06:23:04,942 | INFO     | will attempt to kill all subprocesses of pid=23779
[2026-03-07 07:23:48] 2026-03-07 06:23:05,035 | INFO     | process IDs to be killed: [23779] (in reverse order)
[2026-03-07 07:23:48] 2026-03-07 06:23:05,708 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 07:23:48] 2026-03-07 06:23:05,708 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 07:23:48] 2026-03-07 06:23:05,710 | INFO     | did not find any defunct processes belonging to 23779
[2026-03-07 07:23:48] 2026-03-07 06:23:05,712 | INFO     | did not find any defunct processes belonging to 23779
[2026-03-07 07:23:48] 2026-03-07 06:23:05,712 | INFO     | ready for new job
[2026-03-07 07:23:48] 2026-03-07 06:23:05,712 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 07:23:48] 2026-03-07 06:23:05,714 | INFO     | **************************************
[2026-03-07 07:23:48] 2026-03-07 06:23:05,714 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 07:23:48] 2026-03-07 06:23:05,715 | INFO     | **************************************
[2026-03-07 07:23:48] 2026-03-07 06:23:05,715 | INFO     | 
[2026-03-07 07:23:48] 2026-03-07 06:23:05,715 | INFO     | pilot is running in a VM
[2026-03-07 07:23:48] 2026-03-07 06:23:05,715 | INFO     | architecture information:
[2026-03-07 07:23:48] 2026-03-07 06:23:05,716 | INFO     | executing command: cat /etc/os-release
[2026-03-07 07:23:48] 2026-03-07 06:23:06,011 | INFO     | cat /etc/os-release:
[2026-03-07 07:23:48] NAME="CentOS Linux"
[2026-03-07 07:23:48] VERSION="7 (Core)"
[2026-03-07 07:23:48] ID="centos"
[2026-03-07 07:23:48] ID_LIKE="rhel fedora"
[2026-03-07 07:23:48] VERSION_ID="7"
[2026-03-07 07:23:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 07:23:48] ANSI_COLOR="0;31"
[2026-03-07 07:23:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 07:23:48] HOME_URL="https://www.centos.org/"
[2026-03-07 07:23:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 07:23:48] 
[2026-03-07 07:23:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 07:23:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 07:23:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 07:23:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 07:23:48] 
[2026-03-07 07:23:48] 2026-03-07 06:23:06,011 | INFO     | **************************************
[2026-03-07 07:23:48] 2026-03-07 06:23:06,515 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-03-07 07:23:48] 2026-03-07 06:23:06,828 | INFO     | sufficient remaining disk space (496515416064 B)
[2026-03-07 07:23:48] 2026-03-07 06:23:06,828 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 07:23:48] 2026-03-07 06:23:06,828 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 07:23:48] 2026-03-07 06:23:06,828 | INFO     | update_server=False
[2026-03-07 07:23:48] 2026-03-07 06:23:06,829 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 07:23:48] 2026-03-07 06:23:06,829 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 07:23:48] 2026-03-07 06:23:06,829 | INFO     | aborting loop
[2026-03-07 07:23:48] 2026-03-07 06:23:07,080 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 07:23:48] 2026-03-07 06:23:07,403 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 07:23:48] 2026-03-07 06:23:07,443 | INFO     | all data control threads have been joined
[2026-03-07 07:23:48] 2026-03-07 06:23:07,834 | INFO     | [job] retrieve thread has finished
[2026-03-07 07:23:48] 2026-03-07 06:23:07,835 | INFO     | [job] job monitor thread has finished
[2026-03-07 07:23:48] 2026-03-07 06:23:07,978 | INFO     | all job control threads have been joined
[2026-03-07 07:23:48] 2026-03-07 06:23:08,135 | INFO     | [payload] failed_post thread has finished
[2026-03-07 07:23:48] 2026-03-07 06:23:08,229 | INFO     | all payload control threads have been joined
[2026-03-07 07:23:48] 2026-03-07 06:23:08,388 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 07:23:48] 2026-03-07 06:23:08,432 | INFO     | [data] copytool_in thread has finished
[2026-03-07 07:23:48] 2026-03-07 06:23:08,449 | INFO     | [data] control thread has finished
[2026-03-07 07:23:48] 2026-03-07 06:23:08,510 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 07:23:48] 2026-03-07 06:23:08,521 | INFO     | [job] validate thread has finished
[2026-03-07 07:23:48] 2026-03-07 06:23:08,901 | INFO     | [payload] validate_post thread has finished
[2026-03-07 07:23:48] 2026-03-07 06:23:08,984 | INFO     | [job] control thread has finished
[2026-03-07 07:23:48] 2026-03-07 06:23:09,087 | INFO     | [data] copytool_out thread has finished
[2026-03-07 07:23:48] 2026-03-07 06:23:09,156 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 07:23:48] 2026-03-07 06:23:09,235 | INFO     | [payload] control thread has finished
[2026-03-07 07:23:48] 2026-03-07 06:23:09,295 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 07:23:48] 2026-03-07 06:23:09,394 | INFO     | [job] queue monitor thread has finished
[2026-03-07 07:23:48] 2026-03-07 06:23:11,412 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 07:23:48] 2026-03-07 06:23:17,167 | INFO     | job.realtimelogging is not enabled
[2026-03-07 07:23:48] 2026-03-07 06:23:18,173 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 07:23:48] 2026-03-07 06:23:35,974 | INFO     | PID=19349 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-07 07:23:48] 2026-03-07 06:23:35,974 | INFO     | .. there are 2 such processes running
[2026-03-07 07:23:48] 2026-03-07 06:23:35,976 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 07:23:48] 2026-03-07 06:23:35,976 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 07:23:48] 2026-03-07 06:23:35,976 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 07:23:48] 2026-03-07 06:23:37,830 | INFO     | [monitor] cgroup control has ended
[2026-03-07 07:23:48] 2026-03-07 06:23:38,234 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140096805717824)>', '<ExcThread(monitor, started 140095977936640)>']
[2026-03-07 07:23:48] 2026-03-07 06:23:38,993 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 07:23:48] 2026-03-07 06:23:38,993 | INFO     | [monitor] control thread has ended
[2026-03-07 07:23:48] 2026-03-07 06:23:43,260 | INFO     | all workflow threads have been joined
[2026-03-07 07:23:48] 2026-03-07 06:23:43,260 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 07:23:48] 2026-03-07 06:23:43,261 | INFO     | traces error code: 0
[2026-03-07 07:23:48] 2026-03-07 06:23:43,261 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 07:23:48] 2026-03-07 06:23:43,770 [wrapper] ==== pilot stdout END ====
[2026-03-07 07:23:48] 2026-03-07 06:23:43,893 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 07:23:48] 2026-03-07 06:23:43,982 [wrapper] pilotpid: 19349
[2026-03-07 07:23:48] 2026-03-07 06:23:44,042 [wrapper] Pilot exit status: 0
[2026-03-07 07:23:48] 2026-03-07 06:23:44,558 [wrapper] pandaids: 7043101782
[2026-03-07 07:23:48] 2026-03-07 06:23:45,505 [wrapper] cleanup supervisor_pilot 13718 19350
[2026-03-07 07:23:48] 2026-03-07 06:23:45,606 [wrapper] Test setup, not cleaning
[2026-03-07 07:23:48] 2026-03-07 06:23:45,712 [wrapper] apfmon messages muted
[2026-03-07 07:23:48] 2026-03-07 06:23:45,790 [wrapper] ==== wrapper stdout END ====
[2026-03-07 07:23:48] 2026-03-07 06:23:45,912 [wrapper] ==== wrapper stderr END ====
[2026-03-07 07:23:48]  *** Error codes and diagnostics ***
[2026-03-07 07:23:48]     "exeErrorCode": 0,
[2026-03-07 07:23:48]     "exeErrorDiag": "",
[2026-03-07 07:23:48]     "pilotErrorCode": 0,
[2026-03-07 07:23:48]     "pilotErrorDiag": "",
[2026-03-07 07:23:48]  *** Listing of results directory ***
[2026-03-07 07:23:48] total 474220
[2026-03-07 07:23:48] -rw-r--r--. 1 boinc boinc    584627 Mar  6 12:27 pilot3.tar.gz
[2026-03-07 07:23:48] -rwx------. 1 boinc boinc     36322 Mar  6 12:29 runpilot2-wrapper.sh
[2026-03-07 07:23:48] -rw-r--r--. 1 boinc boinc      5111 Mar  6 12:29 queuedata.json
[2026-03-07 07:23:48] -rw-r--r--. 1 boinc boinc       100 Mar  7 02:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 07:23:48] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 02:50 run_atlas
[2026-03-07 07:23:48] -rw-r--r--. 1 boinc boinc       105 Mar  7 02:50 job.xml
[2026-03-07 07:23:48] -rw-r--r--. 2 boinc boinc 275037426 Mar  7 02:50 EVNT.48958551._000071.pool.root.1
[2026-03-07 07:23:48] -rw-r--r--. 2 boinc boinc    597940 Mar  7 02:50 input.tar.gz
[2026-03-07 07:23:48] -rw-r--r--. 1 boinc boinc      6390 Mar  7 02:50 init_data.xml
[2026-03-07 07:23:48] -rw-r--r--. 2 boinc boinc     15845 Mar  7 02:50 start_atlas.sh
[2026-03-07 07:23:48] drwxrwx--x. 2 boinc boinc        68 Mar  7 02:50 shared
[2026-03-07 07:23:48] -rw-r--r--. 1 boinc boinc         0 Mar  7 02:50 boinc_lockfile
[2026-03-07 07:23:48] -rw-r--r--. 1 boinc boinc      2517 Mar  7 02:50 pandaJob.out
[2026-03-07 07:23:48] -rw-------. 1 boinc boinc    999194 Mar  7 02:51 agis_schedconf.cvmfs.json
[2026-03-07 07:23:48] -rw-------. 1 boinc boinc       415 Mar  7 02:51 workernode_map.json
[2026-03-07 07:23:48] drwx------. 5 boinc boinc      4096 Mar  7 02:51 pilot3
[2026-03-07 07:23:48] -rw-------. 1 boinc boinc 201091559 Mar  7 07:21 HITS.48958554._001731.pool.root.1
[2026-03-07 07:23:48] -rw-r--r--. 1 boinc boinc       530 Mar  7 07:21 boinc_task_state.xml
[2026-03-07 07:23:48] -rw-------. 1 boinc boinc      1016 Mar  7 07:22 memory_monitor_summary.json
[2026-03-07 07:23:48] -rw-------. 1 boinc boinc   1521291 Mar  7 07:22 agis_ddmendpoints.agis.ALL.json
[2026-03-07 07:23:48] -rw-------. 1 boinc boinc    491024 Mar  7 07:22 log.48958554._001731.job.log.tgz.1
[2026-03-07 07:23:48] -rw-------. 1 boinc boinc      6308 Mar  7 07:23 heartbeat.json
[2026-03-07 07:23:48] -rw-r--r--. 1 boinc boinc        28 Mar  7 07:23 wrapper_checkpoint.txt
[2026-03-07 07:23:48] -rw-------. 1 boinc boinc        95 Mar  7 07:23 pilot_heartbeat.json
[2026-03-07 07:23:48] -rw-------. 1 boinc boinc      4952 Mar  7 07:23 pilotlog.txt
[2026-03-07 07:23:48] -rw-------. 1 boinc boinc   2284177 Mar  7 07:23 log.48958554._001731.job.log.1
[2026-03-07 07:23:48] -rw-------. 1 boinc boinc       357 Mar  7 07:23 output.list
[2026-03-07 07:23:48] -rw-r--r--. 1 boinc boinc       620 Mar  7 07:23 runtime_log
[2026-03-07 07:23:48] -rw-------. 1 boinc boinc   2795520 Mar  7 07:23 result.tar.gz
[2026-03-07 07:23:48] -rw-------. 1 boinc boinc       656 Mar  7 07:23 xuvMDmnXiI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmskRLDmWqRMCo.diag
[2026-03-07 07:23:48] -rw-r--r--. 1 boinc boinc      8816 Mar  7 07:23 runtime_log.err
[2026-03-07 07:23:48] -rw-r--r--. 1 boinc boinc      8192 Mar  7 07:23 boinc_mmap_file
[2026-03-07 07:23:48] -rw-r--r--. 1 boinc boinc     20716 Mar  7 07:23 stderr.txt
[2026-03-07 07:23:48] HITS file was successfully produced:
[2026-03-07 07:23:48] -rw-------. 1 boinc boinc 201091559 Mar  7 07:21 shared/HITS.pool.root.1
[2026-03-07 07:23:48]  *** Contents of shared directory: ***
[2026-03-07 07:23:48] total 468304
[2026-03-07 07:23:48] -rw-r--r--. 2 boinc boinc 275037426 Mar  7 02:50 ATLAS.root_0
[2026-03-07 07:23:48] -rw-r--r--. 2 boinc boinc    597940 Mar  7 02:50 input.tar.gz
[2026-03-07 07:23:48] -rw-r--r--. 2 boinc boinc     15845 Mar  7 02:50 start_atlas.sh
[2026-03-07 07:23:48] -rw-------. 1 boinc boinc 201091559 Mar  7 07:21 HITS.pool.root.1
[2026-03-07 07:23:48] -rw-------. 1 boinc boinc   2795520 Mar  7 07:23 result.tar.gz
07:23:50 (15462): run_atlas exited; CPU time 62289.394724
07:23:50 (15462): called boinc_finish(0)

</stderr_txt>
]]>

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