Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:08:42 (3354192): wrapper (7.7.26015): starting
16:08:42 (3354192): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 16:08:42] Arguments: --nthreads 4
[2026-03-08 16:08:42] Threads: 4
[2026-03-08 16:08:42] Checking for CVMFS
[2026-03-08 16:08:42] No cvmfs_config command found, will try listing directly
[2026-03-08 16:08:42] CVMFS is ok
[2026-03-08 16:08:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 16:08:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 16:08:42] Further information can be found at the LHC@home message board.
[2026-03-08 16:08:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 16:08:42] Checking for apptainer binary...
[2026-03-08 16:08:42] which: no apptainer in ((null))
[2026-03-08 16:08:42] apptainer is not installed, using version from CVMFS
[2026-03-08 16:08:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 16:08:43] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-03-08 16:08:43] apptainer works
[2026-03-08 16:08:43] Set ATHENA_PROC_NUMBER=4
[2026-03-08 16:08:43] Set ATHENA_CORE_NUMBER=4
[2026-03-08 16:08:43] Starting ATLAS job with PandaID=7043008362
[2026-03-08 16:08:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 20:39:32]  *** The last 200 lines of the pilot log: ***
[2026-03-08 20:39:32] 2026-03-08 19:38:30,426 | INFO     | job 7043008362 has finished - writing final server update
[2026-03-08 20:39:32] 2026-03-08 19:38:30,426 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_42255/.job.ad'
[2026-03-08 20:39:32] 2026-03-08 19:38:30,426 | INFO     | total number of processed events: 400 (read)
[2026-03-08 20:39:32] 2026-03-08 19:38:30,438 | INFO     | using path: /var/lib/boinc/var/slot28/slots/0/PanDA_Pilot-7043008362/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 20:39:32] 2026-03-08 19:38:30,439 | INFO     | extracted standard info from prmon json
[2026-03-08 20:39:32] 2026-03-08 19:38:30,439 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 20:39:32] 2026-03-08 19:38:30,439 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 20:39:32] 2026-03-08 19:38:30,440 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 20:39:32] 2026-03-08 19:38:30,440 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 20:39:32] 2026-03-08 19:38:30,447 | INFO     | fitting pss+swap vs Time
[2026-03-08 20:39:32] 2026-03-08 19:38:30,447 | INFO     | sum of square deviations: 5770452380.0
[2026-03-08 20:39:32] 2026-03-08 19:38:30,449 | INFO     | sum of deviations: 18412624299.999996
[2026-03-08 20:39:32] 2026-03-08 19:38:30,449 | INFO     | mean x: 1772990614.0
[2026-03-08 20:39:32] 2026-03-08 19:38:30,449 | INFO     | mean y: 2306512.9811320757
[2026-03-08 20:39:32] 2026-03-08 19:38:30,449 | INFO     | intersect: -5655033312.949173
[2026-03-08 20:39:32] 2026-03-08 19:38:30,450 | INFO     | chi2: 2.1198822047402994
[2026-03-08 20:39:32] 2026-03-08 19:38:30,450 | INFO     | sum of square deviations: 5449944045.0
[2026-03-08 20:39:32] 2026-03-08 19:38:30,452 | INFO     | sum of deviations: 35067868733.99999
[2026-03-08 20:39:32] 2026-03-08 19:38:30,452 | INFO     | mean x: 1772990461.5
[2026-03-08 20:39:32] 2026-03-08 19:38:30,453 | INFO     | mean y: 2314311.9307692307
[2026-03-08 20:39:32] 2026-03-08 19:38:30,453 | INFO     | intersect: -11406059105.693203
[2026-03-08 20:39:32] 2026-03-08 19:38:30,453 | INFO     | chi2: 1.2529181829547766
[2026-03-08 20:39:32] 2026-03-08 19:38:30,453 | INFO     | current chi2=1.2529181829547766 (change=40.896801711288106 %)
[2026-03-08 20:39:32] 2026-03-08 19:38:30,454 | INFO     | sum of square deviations: 5141528960.0
[2026-03-08 20:39:32] 2026-03-08 19:38:30,456 | INFO     | sum of deviations: 34157893913.999996
[2026-03-08 20:39:32] 2026-03-08 19:38:30,456 | INFO     | mean x: 1772990309.0
[2026-03-08 20:39:32] 2026-03-08 19:38:30,456 | INFO     | mean y: 2313861.925490196
[2026-03-08 20:39:32] 2026-03-08 19:38:30,456 | INFO     | intersect: -11776597694.64232
[2026-03-08 20:39:32] 2026-03-08 19:38:30,456 | INFO     | chi2: 1.253311337223579
[2026-03-08 20:39:32] 2026-03-08 19:38:30,456 | INFO     | current chi2=1.253311337223579 (change=-0.03137908557405424 %)
[2026-03-08 20:39:32] 2026-03-08 19:38:30,457 | INFO     | right removable region: 254
[2026-03-08 20:39:32] 2026-03-08 19:38:30,457 | INFO     | sum of square deviations: 5449944045.0
[2026-03-08 20:39:32] 2026-03-08 19:38:30,459 | INFO     | sum of deviations: -12158655450.5
[2026-03-08 20:39:32] 2026-03-08 19:38:30,459 | INFO     | mean x: 1772990766.5
[2026-03-08 20:39:32] 2026-03-08 19:38:30,459 | INFO     | mean y: 2320898.5807692306
[2026-03-08 20:39:32] 2026-03-08 19:38:30,459 | INFO     | intersect: 3957808086.8517814
[2026-03-08 20:39:32] 2026-03-08 19:38:30,460 | INFO     | chi2: 0.8949870975223587
[2026-03-08 20:39:32] 2026-03-08 19:38:30,460 | INFO     | current chi2=0.8949870975223587 (change=57.78128164286369 %)
[2026-03-08 20:39:32] 2026-03-08 19:38:30,460 | INFO     | sum of square deviations: 5141528960.0
[2026-03-08 20:39:32] 2026-03-08 19:38:30,462 | INFO     | sum of deviations: -10582968751.0
[2026-03-08 20:39:32] 2026-03-08 19:38:30,462 | INFO     | mean x: 1772990919.0
[2026-03-08 20:39:32] 2026-03-08 19:38:30,462 | INFO     | mean y: 2320137.745098039
[2026-03-08 20:39:32] 2026-03-08 19:38:30,462 | INFO     | intersect: 3651722414.2974353
[2026-03-08 20:39:32] 2026-03-08 19:38:30,463 | INFO     | chi2: 0.8843169009651919
[2026-03-08 20:39:32] 2026-03-08 19:38:30,463 | INFO     | current chi2=0.8843169009651919 (change=1.1922179198678635 %)
[2026-03-08 20:39:32] 2026-03-08 19:38:30,463 | INFO     | left removable region: 20
[2026-03-08 20:39:32] 2026-03-08 19:38:30,472 | INFO     | sum of square deviations: 3972995422.5
[2026-03-08 20:39:32] 2026-03-08 19:38:30,474 | INFO     | sum of deviations: 3315895462.0000005
[2026-03-08 20:39:32] 2026-03-08 19:38:30,474 | INFO     | mean x: 1772990888.5
[2026-03-08 20:39:32] 2026-03-08 19:38:30,474 | INFO     | mean y: 2329601.076923077
[2026-03-08 20:39:32] 2026-03-08 19:38:30,474 | INFO     | intersect: -1477423536.3291893
[2026-03-08 20:39:32] 2026-03-08 19:38:30,475 | INFO     | chi2: 0.00020127400961868262
[2026-03-08 20:39:32] 2026-03-08 19:38:30,475 | INFO     | current memory leak: 0.83 B/s (using 234 data points, chi2=0.00)
[2026-03-08 20:39:32] 2026-03-08 19:38:30,476 | INFO     | could have reported an average CPU frequency of 2617 MHz (12 samples)
[2026-03-08 20:39:32] 2026-03-08 19:38:30,476 | INFO     | ..............................
[2026-03-08 20:39:32] 2026-03-08 19:38:30,476 | INFO     | . Timing measurements:
[2026-03-08 20:39:32] 2026-03-08 19:38:30,476 | INFO     | . get job = 0 s
[2026-03-08 20:39:32] 2026-03-08 19:38:30,476 | INFO     | . initial setup = 6 s
[2026-03-08 20:39:32] 2026-03-08 19:38:30,476 | INFO     | . payload setup = 6 s
[2026-03-08 20:39:32] 2026-03-08 19:38:30,476 | INFO     | . stage-in = 0 s
[2026-03-08 20:39:32] 2026-03-08 19:38:30,476 | INFO     | . payload execution = 16144 s
[2026-03-08 20:39:32] 2026-03-08 19:38:30,476 | INFO     | . stage-out = 1 s
[2026-03-08 20:39:32] 2026-03-08 19:38:30,476 | INFO     | . log creation = 0 s
[2026-03-08 20:39:32] 2026-03-08 19:38:30,477 | INFO     | ..............................
[2026-03-08 20:39:32] 2026-03-08 19:38:30,584 | INFO     | 
[2026-03-08 20:39:32] 2026-03-08 19:38:30,585 | INFO     | job summary report
[2026-03-08 20:39:32] 2026-03-08 19:38:30,585 | INFO     | --------------------------------------------------
[2026-03-08 20:39:32] 2026-03-08 19:38:30,585 | INFO     | PanDA job id: 7043008362
[2026-03-08 20:39:32] 2026-03-08 19:38:30,585 | INFO     | task id: 48966988
[2026-03-08 20:39:32] 2026-03-08 19:38:30,585 | INFO     | errors: (none)
[2026-03-08 20:39:32] 2026-03-08 19:38:30,585 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 20:39:32] 2026-03-08 19:38:30,585 | INFO     | pilot state: finished 
[2026-03-08 20:39:32] 2026-03-08 19:38:30,586 | INFO     | transexitcode: 0
[2026-03-08 20:39:32] 2026-03-08 19:38:30,586 | INFO     | exeerrorcode: 0
[2026-03-08 20:39:32] 2026-03-08 19:38:30,586 | INFO     | exeerrordiag: 
[2026-03-08 20:39:32] 2026-03-08 19:38:30,586 | INFO     | exitcode: 0
[2026-03-08 20:39:32] 2026-03-08 19:38:30,586 | INFO     | exitmsg: OK
[2026-03-08 20:39:32] 2026-03-08 19:38:30,586 | INFO     | cpuconsumptiontime: 54084 s
[2026-03-08 20:39:32] 2026-03-08 19:38:30,586 | INFO     | nevents: 400
[2026-03-08 20:39:32] 2026-03-08 19:38:30,586 | INFO     | neventsw: 0
[2026-03-08 20:39:32] 2026-03-08 19:38:30,586 | INFO     | pid: 3362824
[2026-03-08 20:39:32] 2026-03-08 19:38:30,586 | INFO     | pgrp: 3362824
[2026-03-08 20:39:32] 2026-03-08 19:38:30,586 | INFO     | corecount: 4
[2026-03-08 20:39:32] 2026-03-08 19:38:30,586 | INFO     | event service: False
[2026-03-08 20:39:32] 2026-03-08 19:38:30,586 | INFO     | sizes: {0: 2295418, 1: 2295879, 12: 2295879, 16154: 2328009, 16157: 2332317, 16158: 2332373, 16159: 2332695}
[2026-03-08 20:39:32] 2026-03-08 19:38:30,587 | INFO     | --------------------------------------------------
[2026-03-08 20:39:32] 2026-03-08 19:38:30,587 | INFO     | 
[2026-03-08 20:39:32] 2026-03-08 19:38:30,587 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/0
[2026-03-08 20:39:32] 2026-03-08 19:38:30,639 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 20:39:32] 2026-03-08 19:38:30,639 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 20:39:32] 2026-03-08 19:38:30,639 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 20:39:32] 2026-03-08 19:38:30,639 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 20:39:32] 2026-03-08 19:38:30,639 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 20:39:32] 2026-03-08 19:38:30,640 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 20:39:32] 2026-03-08 19:38:30,640 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 20:39:32] 2026-03-08 19:38:30,640 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 20:39:32] 2026-03-08 19:38:30,640 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 20:39:32] 2026-03-08 19:38:30,640 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 20:39:32] 2026-03-08 19:38:30,640 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 20:39:32] 2026-03-08 19:38:30,640 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 20:39:32] 2026-03-08 19:38:30,640 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 20:39:32] 2026-03-08 19:38:30,640 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 20:39:32] 2026-03-08 19:38:30,640 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 20:39:32] 2026-03-08 19:38:30,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 20:39:32] 2026-03-08 19:38:30,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 20:39:32] 2026-03-08 19:38:30,641 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 20:39:32] 2026-03-08 19:38:30,641 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 20:39:32] 2026-03-08 19:38:30,641 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 20:39:32] 2026-03-08 19:38:30,641 | INFO     | job 7043008362 has completed (purged errors)
[2026-03-08 20:39:32] 2026-03-08 19:38:30,641 | INFO     | overall cleanup function is called
[2026-03-08 20:39:32] 2026-03-08 19:38:31,648 | INFO     | --- collectZombieJob: --- 10, [3362824]
[2026-03-08 20:39:32] 2026-03-08 19:38:31,649 | INFO     | zombie collector waiting for pid 3362824
[2026-03-08 20:39:32] 2026-03-08 19:38:31,649 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 20:39:32] 2026-03-08 19:38:31,649 | INFO     | collected zombie processes
[2026-03-08 20:39:32] 2026-03-08 19:38:31,649 | INFO     | will attempt to kill all subprocesses of pid=3362824
[2026-03-08 20:39:32] 2026-03-08 19:38:32,174 | INFO     | process IDs to be killed: [3362824] (in reverse order)
[2026-03-08 20:39:32] 2026-03-08 19:38:32,377 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 20:39:32] 2026-03-08 19:38:32,378 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 20:39:32] 2026-03-08 19:38:32,397 | INFO     | did not find any defunct processes belonging to 3362824
[2026-03-08 20:39:32] 2026-03-08 19:38:32,416 | INFO     | did not find any defunct processes belonging to 3362824
[2026-03-08 20:39:32] 2026-03-08 19:38:32,417 | INFO     | ready for new job
[2026-03-08 20:39:32] 2026-03-08 19:38:32,417 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 20:39:32] 2026-03-08 19:38:32,419 | INFO     | **************************************
[2026-03-08 20:39:32] 2026-03-08 19:38:32,420 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 20:39:32] 2026-03-08 19:38:32,420 | INFO     | **************************************
[2026-03-08 20:39:32] 2026-03-08 19:38:32,420 | INFO     | 
[2026-03-08 20:39:32] 2026-03-08 19:38:32,423 | INFO     | architecture information:
[2026-03-08 20:39:32] 2026-03-08 19:38:32,424 | INFO     | executing command: cat /etc/os-release
[2026-03-08 20:39:32] 2026-03-08 19:38:32,445 | INFO     | cat /etc/os-release:
[2026-03-08 20:39:32] NAME="CentOS Linux"
[2026-03-08 20:39:32] VERSION="7 (Core)"
[2026-03-08 20:39:32] ID="centos"
[2026-03-08 20:39:32] ID_LIKE="rhel fedora"
[2026-03-08 20:39:32] VERSION_ID="7"
[2026-03-08 20:39:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 20:39:32] ANSI_COLOR="0;31"
[2026-03-08 20:39:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 20:39:32] HOME_URL="https://www.centos.org/"
[2026-03-08 20:39:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 20:39:32] 
[2026-03-08 20:39:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 20:39:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 20:39:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 20:39:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 20:39:32] 
[2026-03-08 20:39:32] 2026-03-08 19:38:32,445 | INFO     | **************************************
[2026-03-08 20:39:32] 2026-03-08 19:38:32,948 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/0
[2026-03-08 20:39:32] 2026-03-08 19:38:32,968 | INFO     | sufficient remaining disk space (20329791488 B)
[2026-03-08 20:39:32] 2026-03-08 19:38:32,969 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 20:39:32] 2026-03-08 19:38:32,969 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 20:39:32] 2026-03-08 19:38:32,969 | INFO     | update_server=False
[2026-03-08 20:39:32] 2026-03-08 19:38:32,969 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 20:39:32] 2026-03-08 19:38:33,333 | INFO     | all data control threads have been joined
[2026-03-08 20:39:32] 2026-03-08 19:38:33,473 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 20:39:32] 2026-03-08 19:38:33,495 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 20:39:32] 2026-03-08 19:38:33,496 | INFO     | aborting loop
[2026-03-08 20:39:32] 2026-03-08 19:38:33,695 | INFO     | all payload control threads have been joined
[2026-03-08 20:39:32] 2026-03-08 19:38:33,975 | INFO     | [job] retrieve thread has finished
[2026-03-08 20:39:32] 2026-03-08 19:38:33,997 | INFO     | all job control threads have been joined
[2026-03-08 20:39:32] 2026-03-08 19:38:34,119 | INFO     | [payload] failed_post thread has finished
[2026-03-08 20:39:32] 2026-03-08 19:38:34,311 | INFO     | [payload] validate_post thread has finished
[2026-03-08 20:39:32] 2026-03-08 19:38:34,339 | INFO     | [data] control thread has finished
[2026-03-08 20:39:32] 2026-03-08 19:38:34,501 | INFO     | [job] job monitor thread has finished
[2026-03-08 20:39:32] 2026-03-08 19:38:34,703 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 20:39:32] 2026-03-08 19:38:34,703 | INFO     | [payload] control thread has finished
[2026-03-08 20:39:32] 2026-03-08 19:38:34,714 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 20:39:32] 2026-03-08 19:38:34,912 | INFO     | [data] copytool_in thread has finished
[2026-03-08 20:39:32] 2026-03-08 19:38:34,913 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 20:39:32] 2026-03-08 19:38:34,995 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 20:39:32] 2026-03-08 19:38:35,002 | INFO     | [job] control thread has finished
[2026-03-08 20:39:32] 2026-03-08 19:38:35,091 | INFO     | [job] validate thread has finished
[2026-03-08 20:39:32] 2026-03-08 19:38:35,409 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 20:39:32] 2026-03-08 19:38:35,478 | INFO     | [data] copytool_out thread has finished
[2026-03-08 20:39:32] 2026-03-08 19:38:35,594 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 20:39:32] 2026-03-08 19:38:36,599 | INFO     | [job] queue monitor thread has finished
[2026-03-08 20:39:32] 2026-03-08 19:38:38,719 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 20:39:32] 2026-03-08 19:38:55,284 [wrapper] supervise_pilot (15 min periods counter: 19)
[2026-03-08 20:39:32] 2026-03-08 19:39:03,764 | INFO     | PID=3357970 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 20:39:32] 2026-03-08 19:39:03,764 | INFO     | .. there are 14 such processes running
[2026-03-08 20:39:32] 2026-03-08 19:39:03,764 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 20:39:32] 2026-03-08 19:39:03,764 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 20:39:32] 2026-03-08 19:39:03,764 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 20:39:32] 2026-03-08 19:39:26,203 | INFO     | [monitor] cgroup control has ended
[2026-03-08 20:39:32] 2026-03-08 19:39:26,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23216315455296)>', '<ExcThread(monitor, started 23216077944576)>']
[2026-03-08 20:39:32] 2026-03-08 19:39:26,881 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 20:39:32] 2026-03-08 19:39:26,882 | INFO     | [monitor] control thread has ended
[2026-03-08 20:39:32] 2026-03-08 19:39:31,803 | INFO     | all workflow threads have been joined
[2026-03-08 20:39:32] 2026-03-08 19:39:31,804 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 20:39:32] 2026-03-08 19:39:31,804 | INFO     | traces error code: 0
[2026-03-08 20:39:32] 2026-03-08 19:39:31,804 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 20:39:32] 2026-03-08 19:39:32,015 [wrapper] ==== pilot stdout END ====
[2026-03-08 20:39:32] 2026-03-08 19:39:32,032 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 20:39:32] 2026-03-08 19:39:32,044 [wrapper] pilotpid: 3357970
[2026-03-08 20:39:32] 2026-03-08 19:39:32,047 [wrapper] Pilot exit status: 0
[2026-03-08 20:39:32] 2026-03-08 19:39:32,139 [wrapper] pandaids: 7043008362
[2026-03-08 20:39:32] 2026-03-08 19:39:32,220 [wrapper] cleanup supervisor_pilot 3675212 3357971
[2026-03-08 20:39:32] 2026-03-08 19:39:32,223 [wrapper] Test setup, not cleaning
[2026-03-08 20:39:32] 2026-03-08 19:39:32,226 [wrapper] apfmon messages muted
[2026-03-08 20:39:32] 2026-03-08 19:39:32,229 [wrapper] ==== wrapper stdout END ====
[2026-03-08 20:39:32] 2026-03-08 19:39:32,231 [wrapper] ==== wrapper stderr END ====
[2026-03-08 20:39:32]  *** Error codes and diagnostics ***
[2026-03-08 20:39:32]     "exeErrorCode": 0,
[2026-03-08 20:39:32]     "exeErrorDiag": "",
[2026-03-08 20:39:32]     "pilotErrorCode": 0,
[2026-03-08 20:39:32]     "pilotErrorDiag": "",
[2026-03-08 20:39:32]  *** Listing of results directory ***
[2026-03-08 20:39:32] total 411808
[2026-03-08 20:39:32] -rw-r--r--. 1 boinc boinc    584627 Mar  6 09:10 pilot3.tar.gz
[2026-03-08 20:39:32] -rw-r--r--. 1 boinc boinc      5111 Mar  6 09:13 queuedata.json
[2026-03-08 20:39:32] -rwx------. 1 boinc boinc     36322 Mar  6 09:13 runpilot2-wrapper.sh
[2026-03-08 20:39:32] -rw-r--r--. 1 boinc boinc       100 Mar  8 16:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 20:39:32] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 16:08 run_atlas
[2026-03-08 20:39:32] -rw-r--r--. 1 boinc boinc       105 Mar  8 16:08 job.xml
[2026-03-08 20:39:32] -rw-r--r--. 2 boinc boinc 212437398 Mar  8 16:08 EVNT.48966985._000118.pool.root.1
[2026-03-08 20:39:32] -rw-r--r--. 1 boinc boinc      6560 Mar  8 16:08 init_data.xml
[2026-03-08 20:39:32] -rw-r--r--. 2 boinc boinc     15845 Mar  8 16:08 start_atlas.sh
[2026-03-08 20:39:32] drwxrwx--x. 2 boinc boinc      4096 Mar  8 16:08 shared
[2026-03-08 20:39:32] -rw-r--r--. 2 boinc boinc    597963 Mar  8 16:08 input.tar.gz
[2026-03-08 20:39:32] -rw-r--r--. 1 boinc boinc         0 Mar  8 16:08 boinc_lockfile
[2026-03-08 20:39:32] -rw-r--r--. 1 boinc boinc      2589 Mar  8 16:08 pandaJob.out
[2026-03-08 20:39:32] -rw-------. 1 boinc boinc    999212 Mar  8 16:08 agis_schedconf.cvmfs.json
[2026-03-08 20:39:32] -rw-------. 1 boinc boinc       448 Mar  8 16:08 workernode_map.json
[2026-03-08 20:39:32] drwx------. 5 boinc boinc      4096 Mar  8 16:08 pilot3
[2026-03-08 20:39:32] -rw-------. 1 boinc boinc 199965429 Mar  8 20:37 HITS.48966988._002884.pool.root.1
[2026-03-08 20:39:32] -rw-r--r--. 1 boinc boinc       530 Mar  8 20:38 boinc_task_state.xml
[2026-03-08 20:39:32] -rw-------. 1 boinc boinc        95 Mar  8 20:38 pilot_heartbeat.json
[2026-03-08 20:39:32] -rw-------. 1 boinc boinc      1033 Mar  8 20:38 memory_monitor_summary.json
[2026-03-08 20:39:32] -rw-------. 1 boinc boinc   1511578 Mar  8 20:38 agis_ddmendpoints.agis.ALL.json
[2026-03-08 20:39:32] -rw-------. 1 boinc boinc    422870 Mar  8 20:38 log.48966988._002884.job.log.tgz.1
[2026-03-08 20:39:32] -rw-------. 1 boinc boinc      6396 Mar  8 20:38 heartbeat.json
[2026-03-08 20:39:32] -rw-r--r--. 1 boinc boinc      8192 Mar  8 20:39 boinc_mmap_file
[2026-03-08 20:39:32] -rw-r--r--. 1 boinc boinc        28 Mar  8 20:39 wrapper_checkpoint.txt
[2026-03-08 20:39:32] -rw-------. 1 boinc boinc      4829 Mar  8 20:39 pilotlog.txt
[2026-03-08 20:39:32] -rw-------. 1 boinc boinc   2257118 Mar  8 20:39 log.48966988._002884.job.log.1
[2026-03-08 20:39:32] -rw-------. 1 boinc boinc       357 Mar  8 20:39 output.list
[2026-03-08 20:39:32] -rw-r--r--. 1 boinc boinc       620 Mar  8 20:39 runtime_log
[2026-03-08 20:39:32] -rw-------. 1 boinc boinc   2693120 Mar  8 20:39 result.tar.gz
[2026-03-08 20:39:32] -rw-r--r--. 1 boinc boinc      9205 Mar  8 20:39 runtime_log.err
[2026-03-08 20:39:32] -rw-------. 1 boinc boinc       665 Mar  8 20:39 1gYKDmoUfI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmN0QLDm20qPom.diag
[2026-03-08 20:39:32] -rw-r--r--. 1 boinc boinc     20907 Mar  8 20:39 stderr.txt
[2026-03-08 20:39:32] HITS file was successfully produced:
[2026-03-08 20:39:32] -rw-------. 1 boinc boinc 199965429 Mar  8 20:37 shared/HITS.pool.root.1
[2026-03-08 20:39:32]  *** Contents of shared directory: ***
[2026-03-08 20:39:32] total 405980
[2026-03-08 20:39:32] -rw-r--r--. 2 boinc boinc 212437398 Mar  8 16:08 ATLAS.root_0
[2026-03-08 20:39:32] -rw-r--r--. 2 boinc boinc     15845 Mar  8 16:08 start_atlas.sh
[2026-03-08 20:39:32] -rw-r--r--. 2 boinc boinc    597963 Mar  8 16:08 input.tar.gz
[2026-03-08 20:39:32] -rw-------. 1 boinc boinc 199965429 Mar  8 20:37 HITS.pool.root.1
[2026-03-08 20:39:32] -rw-------. 1 boinc boinc   2693120 Mar  8 20:39 result.tar.gz
20:39:33 (3354192): run_atlas exited; CPU time 54829.838540
20:39:33 (3354192): called boinc_finish(0)

</stderr_txt>
]]>

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