Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:55:55 (2533313): wrapper (7.7.26015): starting
09:55:55 (2533313): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 09:55:55] Arguments: --nthreads 4
[2026-03-07 09:55:55] Threads: 4
[2026-03-07 09:55:55] Checking for CVMFS
[2026-03-07 09:55:55] No cvmfs_config command found, will try listing directly
[2026-03-07 09:55:55] CVMFS is ok
[2026-03-07 09:55:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 09:55:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 09:55:55] Further information can be found at the LHC@home message board.
[2026-03-07 09:55:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 09:55:55] Checking for apptainer binary...
[2026-03-07 09:55:55] which: no apptainer in ((null))
[2026-03-07 09:55:55] apptainer is not installed, using version from CVMFS
[2026-03-07 09:55:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 09:55:56] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot80/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-07 09:55:56] apptainer works
[2026-03-07 09:55:56] Set ATHENA_PROC_NUMBER=4
[2026-03-07 09:55:56] Set ATHENA_CORE_NUMBER=4
[2026-03-07 09:55:56] Starting ATLAS job with PandaID=7043067791
[2026-03-07 09:55:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot80/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 11:34:27]  *** The last 200 lines of the pilot log: ***
[2026-03-07 11:34:27]  is_tar=False
[2026-03-07 11:34:27]  lfn=log.48967030._000520.job.log.tgz.1
[2026-03-07 11:34:27]  mtime=0
[2026-03-07 11:34:27]  protocol_id=None
[2026-03-07 11:34:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 11:34:27]  replicas=None
[2026-03-07 11:34:27]  scope=mc23_13p6TeV
[2026-03-07 11:34:27]  status=None
[2026-03-07 11:34:27]  status_code=0
[2026-03-07 11:34:27]  storage_token=
[2026-03-07 11:34:27]  surl=/var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7043067791/log.48967030._000520.job.log.tgz.1
[2026-03-07 11:34:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ab/8b/log.48967030._000520.job.log.tgz.1
[2026-03-07 11:34:27]  workdir=None
[2026-03-07 11:34:27] ]
[2026-03-07 11:34:27] 2026-03-07 10:33:14,555 | INFO     | transferring file log.48967030._000520.job.log.tgz.1 from /var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7043067791/log.48967030._000520.job.log.tgz.1 to /var/lib/b
[2026-03-07 11:34:27] 2026-03-07 10:33:14,556 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7043067791/log.48967030._000520.job.log.tgz.1 /var/lib/boinc/var/slot80/slots/2/lo
[2026-03-07 11:34:27] 2026-03-07 10:33:14,578 | INFO     | adding to output.list: log.48967030._000520.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ab/8b/log.48967030._000520.job.log.tg
[2026-03-07 11:34:27] 2026-03-07 10:33:14,579 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 11:34:27] 2026-03-07 10:33:14,579 | INFO     | summary of transferred files:
[2026-03-07 11:34:27] 2026-03-07 10:33:14,579 | INFO     |  -- lfn=log.48967030._000520.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 11:34:27] 2026-03-07 10:33:14,579 | INFO     | stage-out finished correctly
[2026-03-07 11:34:27] 2026-03-07 10:33:15,494 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 11:34:27] 2026-03-07 10:33:15,494 | INFO     | time since job start (5825s) is within the limit (349056.0s)
[2026-03-07 11:34:27] 2026-03-07 10:33:15,500 | INFO     | 5831s have passed since pilot start - server update state is 'RUNNING'
[2026-03-07 11:34:27] 2026-03-07 10:33:15,989 | INFO     | monitor loop #421: job 0:7043067791 is in state 'finished'
[2026-03-07 11:34:27] 2026-03-07 10:33:15,990 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-07 11:34:27] 2026-03-07 10:33:17,505 | INFO     | time since job start (5827s) is within the limit (349056.0s)
[2026-03-07 11:34:27] 2026-03-07 10:33:17,772 | INFO     | job 7043067791 has state=finished
[2026-03-07 11:34:27] 2026-03-07 10:33:17,773 | INFO     | preparing for final server update for job 7043067791 in state='finished'
[2026-03-07 11:34:27] 2026-03-07 10:33:17,773 | INFO     | reading metadata from: /var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7043067791/jobReport.json
[2026-03-07 11:34:27] 2026-03-07 10:33:17,774 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot80/slots/2/workernode_map.json
[2026-03-07 11:34:27] 2026-03-07 10:33:17,775 | INFO     | this job has now completed (state=finished)
[2026-03-07 11:34:27] 2026-03-07 10:33:17,775 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 11:34:27] 2026-03-07 10:33:17,775 | INFO     | log transfer has been attempted: DONE
[2026-03-07 11:34:27] 2026-03-07 10:33:17,775 | INFO     | job 7043067791 has finished - writing final server update
[2026-03-07 11:34:27] 2026-03-07 10:33:17,775 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_219633/.job.ad'
[2026-03-07 11:34:27] 2026-03-07 10:33:17,775 | INFO     | total number of processed events: 400 (read)
[2026-03-07 11:34:27] 2026-03-07 10:33:17,804 | INFO     | using path: /var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7043067791/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 11:34:27] 2026-03-07 10:33:17,805 | INFO     | extracted standard info from prmon json
[2026-03-07 11:34:27] 2026-03-07 10:33:17,805 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 11:34:27] 2026-03-07 10:33:17,805 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 11:34:27] 2026-03-07 10:33:17,805 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 11:34:27] 2026-03-07 10:33:17,805 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 11:34:27] 2026-03-07 10:33:17,806 | INFO     | fitting pss+swap vs Time
[2026-03-07 11:34:27] 2026-03-07 10:33:17,807 | INFO     | sum of square deviations: 218571540.0
[2026-03-07 11:34:27] 2026-03-07 10:33:17,807 | INFO     | sum of deviations: 639212472.9999999
[2026-03-07 11:34:27] 2026-03-07 10:33:17,807 | INFO     | mean x: 1772876782.0
[2026-03-07 11:34:27] 2026-03-07 10:33:17,807 | INFO     | mean y: 2326109.966292135
[2026-03-07 11:34:27] 2026-03-07 10:33:17,807 | INFO     | intersect: -5182452073.627518
[2026-03-07 11:34:27] 2026-03-07 10:33:17,807 | INFO     | chi2: 0.0004495500217301418
[2026-03-07 11:34:27] 2026-03-07 10:33:17,807 | INFO     | current memory leak: 2.92 B/s (using 89 data points, chi2=0.00)
[2026-03-07 11:34:27] 2026-03-07 10:33:17,807 | INFO     | could have reported an average CPU frequency of 3560 MHz (7 samples)
[2026-03-07 11:34:27] 2026-03-07 10:33:17,807 | INFO     | ..............................
[2026-03-07 11:34:27] 2026-03-07 10:33:17,808 | INFO     | . Timing measurements:
[2026-03-07 11:34:27] 2026-03-07 10:33:17,808 | INFO     | . get job = 0 s
[2026-03-07 11:34:27] 2026-03-07 10:33:17,808 | INFO     | . initial setup = 6 s
[2026-03-07 11:34:27] 2026-03-07 10:33:17,808 | INFO     | . payload setup = 5 s
[2026-03-07 11:34:27] 2026-03-07 10:33:17,808 | INFO     | . stage-in = 0 s
[2026-03-07 11:34:27] 2026-03-07 10:33:17,808 | INFO     | . payload execution = 5803 s
[2026-03-07 11:34:27] 2026-03-07 10:33:17,808 | INFO     | . stage-out = 0 s
[2026-03-07 11:34:27] 2026-03-07 10:33:17,808 | INFO     | . log creation = 0 s
[2026-03-07 11:34:27] 2026-03-07 10:33:17,808 | INFO     | ..............................
[2026-03-07 11:34:27] 2026-03-07 10:33:18,300 | INFO     | 
[2026-03-07 11:34:27] 2026-03-07 10:33:18,301 | INFO     | job summary report
[2026-03-07 11:34:27] 2026-03-07 10:33:18,301 | INFO     | --------------------------------------------------
[2026-03-07 11:34:27] 2026-03-07 10:33:18,301 | INFO     | PanDA job id: 7043067791
[2026-03-07 11:34:27] 2026-03-07 10:33:18,301 | INFO     | task id: 48967030
[2026-03-07 11:34:27] 2026-03-07 10:33:18,301 | INFO     | errors: (none)
[2026-03-07 11:34:27] 2026-03-07 10:33:18,301 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 11:34:27] 2026-03-07 10:33:18,301 | INFO     | pilot state: finished 
[2026-03-07 11:34:27] 2026-03-07 10:33:18,301 | INFO     | transexitcode: 0
[2026-03-07 11:34:27] 2026-03-07 10:33:18,301 | INFO     | exeerrorcode: 0
[2026-03-07 11:34:27] 2026-03-07 10:33:18,301 | INFO     | exeerrordiag: 
[2026-03-07 11:34:27] 2026-03-07 10:33:18,301 | INFO     | exitcode: 0
[2026-03-07 11:34:27] 2026-03-07 10:33:18,301 | INFO     | exitmsg: OK
[2026-03-07 11:34:27] 2026-03-07 10:33:18,301 | INFO     | cpuconsumptiontime: 22242 s
[2026-03-07 11:34:27] 2026-03-07 10:33:18,301 | INFO     | nevents: 400
[2026-03-07 11:34:27] 2026-03-07 10:33:18,301 | INFO     | neventsw: 0
[2026-03-07 11:34:27] 2026-03-07 10:33:18,301 | INFO     | pid: 2548467
[2026-03-07 11:34:27] 2026-03-07 10:33:18,301 | INFO     | pgrp: 2548467
[2026-03-07 11:34:27] 2026-03-07 10:33:18,301 | INFO     | corecount: 4
[2026-03-07 11:34:27] 2026-03-07 10:33:18,301 | INFO     | event service: False
[2026-03-07 11:34:27] 2026-03-07 10:33:18,301 | INFO     | sizes: {0: 2295825, 11: 2295825, 5812: 2331601, 5813: 2331601, 5816: 2331795}
[2026-03-07 11:34:27] 2026-03-07 10:33:18,301 | INFO     | --------------------------------------------------
[2026-03-07 11:34:27] 2026-03-07 10:33:18,301 | INFO     | 
[2026-03-07 11:34:27] 2026-03-07 10:33:18,301 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot80/slots/2
[2026-03-07 11:34:27] 2026-03-07 10:33:18,320 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 11:34:27] 2026-03-07 10:33:18,320 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 11:34:27] 2026-03-07 10:33:18,320 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 11:34:27] 2026-03-07 10:33:18,320 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 11:34:27] 2026-03-07 10:33:18,320 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 11:34:27] 2026-03-07 10:33:18,320 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 11:34:27] 2026-03-07 10:33:18,321 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 11:34:27] 2026-03-07 10:33:18,321 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 11:34:27] 2026-03-07 10:33:18,321 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 11:34:27] 2026-03-07 10:33:18,321 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 11:34:27] 2026-03-07 10:33:18,321 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 11:34:27] 2026-03-07 10:33:18,321 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 11:34:27] 2026-03-07 10:33:18,321 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 11:34:27] 2026-03-07 10:33:18,321 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 11:34:27] 2026-03-07 10:33:18,321 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 11:34:27] 2026-03-07 10:33:18,321 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 11:34:27] 2026-03-07 10:33:18,321 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 11:34:27] 2026-03-07 10:33:18,321 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 11:34:27] 2026-03-07 10:33:18,321 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 11:34:27] 2026-03-07 10:33:18,321 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 11:34:27] 2026-03-07 10:33:18,321 | INFO     | job 7043067791 has completed (purged errors)
[2026-03-07 11:34:27] 2026-03-07 10:33:18,321 | INFO     | overall cleanup function is called
[2026-03-07 11:34:27] 2026-03-07 10:33:19,327 | INFO     | --- collectZombieJob: --- 10, [2548467]
[2026-03-07 11:34:27] 2026-03-07 10:33:19,328 | INFO     | zombie collector waiting for pid 2548467
[2026-03-07 11:34:27] 2026-03-07 10:33:19,328 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 11:34:27] 2026-03-07 10:33:19,328 | INFO     | collected zombie processes
[2026-03-07 11:34:27] 2026-03-07 10:33:19,328 | INFO     | will attempt to kill all subprocesses of pid=2548467
[2026-03-07 11:34:27] 2026-03-07 10:33:19,819 | INFO     | process IDs to be killed: [2548467] (in reverse order)
[2026-03-07 11:34:27] 2026-03-07 10:33:20,026 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 11:34:27] 2026-03-07 10:33:20,026 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 11:34:27] 2026-03-07 10:33:20,055 | INFO     | did not find any defunct processes belonging to 2548467
[2026-03-07 11:34:27] 2026-03-07 10:33:20,082 | INFO     | did not find any defunct processes belonging to 2548467
[2026-03-07 11:34:27] 2026-03-07 10:33:20,083 | INFO     | ready for new job
[2026-03-07 11:34:27] 2026-03-07 10:33:20,083 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 11:34:27] 2026-03-07 10:33:20,084 | INFO     | **************************************
[2026-03-07 11:34:27] 2026-03-07 10:33:20,084 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 11:34:27] 2026-03-07 10:33:20,084 | INFO     | **************************************
[2026-03-07 11:34:27] 2026-03-07 10:33:20,084 | INFO     | 
[2026-03-07 11:34:27] 2026-03-07 10:33:20,089 | INFO     | architecture information:
[2026-03-07 11:34:27] 2026-03-07 10:33:20,090 | INFO     | executing command: cat /etc/os-release
[2026-03-07 11:34:27] 2026-03-07 10:33:20,102 | INFO     | cat /etc/os-release:
[2026-03-07 11:34:27] NAME="CentOS Linux"
[2026-03-07 11:34:27] VERSION="7 (Core)"
[2026-03-07 11:34:27] ID="centos"
[2026-03-07 11:34:27] ID_LIKE="rhel fedora"
[2026-03-07 11:34:27] VERSION_ID="7"
[2026-03-07 11:34:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 11:34:27] ANSI_COLOR="0;31"
[2026-03-07 11:34:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 11:34:27] HOME_URL="https://www.centos.org/"
[2026-03-07 11:34:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 11:34:27] 
[2026-03-07 11:34:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 11:34:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 11:34:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 11:34:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 11:34:27] 
[2026-03-07 11:34:27] 2026-03-07 10:33:20,103 | INFO     | **************************************
[2026-03-07 11:34:27] 2026-03-07 10:33:20,605 | INFO     | executing command: df -mP /var/lib/boinc/var/slot80/slots/2
[2026-03-07 11:34:27] 2026-03-07 10:33:20,622 | INFO     | sufficient remaining disk space (20737687552 B)
[2026-03-07 11:34:27] 2026-03-07 10:33:20,622 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 11:34:27] 2026-03-07 10:33:20,622 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 11:34:27] 2026-03-07 10:33:20,623 | INFO     | update_server=False
[2026-03-07 11:34:27] 2026-03-07 10:33:20,623 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 11:34:27] 2026-03-07 10:33:20,623 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 11:34:27] 2026-03-07 10:33:20,986 | INFO     | all payload control threads have been joined
[2026-03-07 11:34:27] 2026-03-07 10:33:20,999 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-07 11:34:27] 2026-03-07 10:33:21,000 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-07 11:34:27] 2026-03-07 10:33:21,000 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 11:34:27] 2026-03-07 10:33:21,000 | INFO     | will abort loop
[2026-03-07 11:34:27] 2026-03-07 10:33:21,428 | INFO     | all data control threads have been joined
[2026-03-07 11:34:27] 2026-03-07 10:33:21,548 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 11:34:27] 2026-03-07 10:33:21,628 | INFO     | [job] retrieve thread has finished
[2026-03-07 11:34:27] 2026-03-07 10:33:21,657 | INFO     | all job control threads have been joined
[2026-03-07 11:34:27] 2026-03-07 10:33:21,992 | INFO     | [payload] control thread has finished
[2026-03-07 11:34:27] 2026-03-07 10:33:22,005 | INFO     | [job] job monitor thread has finished
[2026-03-07 11:34:27] 2026-03-07 10:33:22,124 | INFO     | [payload] failed_post thread has finished
[2026-03-07 11:34:27] 2026-03-07 10:33:22,233 | INFO     | [job] validate thread has finished
[2026-03-07 11:34:27] 2026-03-07 10:33:22,433 | INFO     | [data] control thread has finished
[2026-03-07 11:34:27] 2026-03-07 10:33:22,502 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 11:34:27] 2026-03-07 10:33:22,557 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 11:34:27] 2026-03-07 10:33:22,627 | INFO     | [data] copytool_out thread has finished
[2026-03-07 11:34:27] 2026-03-07 10:33:22,662 | INFO     | [job] control thread has finished
[2026-03-07 11:34:27] 2026-03-07 10:33:22,665 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 11:34:27] 2026-03-07 10:33:22,677 | INFO     | [data] copytool_in thread has finished
[2026-03-07 11:34:27] 2026-03-07 10:33:22,865 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 11:34:27] 2026-03-07 10:33:23,052 | INFO     | [payload] validate_post thread has finished
[2026-03-07 11:34:27] 2026-03-07 10:33:23,869 | INFO     | [job] queue monitor thread has finished
[2026-03-07 11:34:27] 2026-03-07 10:33:25,553 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 11:34:27] 2026-03-07 10:33:31,055 | INFO     | job.realtimelogging is not enabled
[2026-03-07 11:34:27] 2026-03-07 10:33:32,063 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 11:34:27] 2026-03-07 10:33:51,117 | INFO     | PID=2537959 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 11:34:27] 2026-03-07 10:33:51,117 | INFO     | .. there are 55 such processes running
[2026-03-07 11:34:27] 2026-03-07 10:33:51,117 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 11:34:27] 2026-03-07 10:33:51,117 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 11:34:27] 2026-03-07 10:33:51,117 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 11:34:27] 2026-03-07 10:34:20,252 | INFO     | [monitor] cgroup control has ended
[2026-03-07 11:34:27] 2026-03-07 10:34:22,224 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23066144487232)>', '<ExcThread(monitor, started 23065898776320)>']
[2026-03-07 11:34:27] 2026-03-07 10:34:22,276 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 11:34:27] 2026-03-07 10:34:22,277 | INFO     | [monitor] control thread has ended
[2026-03-07 11:34:27] 2026-03-07 10:34:27,249 | INFO     | all workflow threads have been joined
[2026-03-07 11:34:27] 2026-03-07 10:34:27,250 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 11:34:27] 2026-03-07 10:34:27,250 | INFO     | traces error code: 0
[2026-03-07 11:34:27] 2026-03-07 10:34:27,250 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 11:34:27] 2026-03-07 10:34:27,435 [wrapper] ==== pilot stdout END ====
[2026-03-07 11:34:27] 2026-03-07 10:34:27,438 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 11:34:27] 2026-03-07 10:34:27,441 [wrapper] pilotpid: 2537959
[2026-03-07 11:34:27] 2026-03-07 10:34:27,443 [wrapper] Pilot exit status: 0
[2026-03-07 11:34:27] 2026-03-07 10:34:27,451 [wrapper] pandaids: 7043067791
[2026-03-07 11:34:27] 2026-03-07 10:34:27,572 [wrapper] cleanup supervisor_pilot 3411577 2537960
[2026-03-07 11:34:27] 2026-03-07 10:34:27,574 [wrapper] Test setup, not cleaning
[2026-03-07 11:34:27] 2026-03-07 10:34:27,576 [wrapper] apfmon messages muted
[2026-03-07 11:34:27] 2026-03-07 10:34:27,577 [wrapper] ==== wrapper stdout END ====
[2026-03-07 11:34:27] 2026-03-07 10:34:27,578 [wrapper] ==== wrapper stderr END ====
[2026-03-07 11:34:27]  *** Error codes and diagnostics ***
[2026-03-07 11:34:27]     "exeErrorCode": 0,
[2026-03-07 11:34:27]     "exeErrorDiag": "",
[2026-03-07 11:34:27]     "pilotErrorCode": 0,
[2026-03-07 11:34:27]     "pilotErrorDiag": "",
[2026-03-07 11:34:27]  *** Listing of results directory ***
[2026-03-07 11:34:27] total 405892
[2026-03-07 11:34:27] -rw-r--r--. 1 boinc boinc    584627 Mar  6 11:24 pilot3.tar.gz
[2026-03-07 11:34:27] -rw-r--r--. 1 boinc boinc      5111 Mar  6 12:00 queuedata.json
[2026-03-07 11:34:27] -rwx------. 1 boinc boinc     36322 Mar  6 12:00 runpilot2-wrapper.sh
[2026-03-07 11:34:27] -rw-r--r--. 1 boinc boinc       100 Mar  7 09:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 11:34:27] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 09:55 run_atlas
[2026-03-07 11:34:27] -rw-r--r--. 1 boinc boinc       105 Mar  7 09:55 job.xml
[2026-03-07 11:34:27] -rw-r--r--. 1 boinc boinc      6706 Mar  7 09:55 init_data.xml
[2026-03-07 11:34:27] -rw-r--r--. 2 boinc boinc 213181235 Mar  7 09:55 EVNT.48967027._000066.pool.root.1
[2026-03-07 11:34:27] -rw-r--r--. 2 boinc boinc     15845 Mar  7 09:55 start_atlas.sh
[2026-03-07 11:34:27] drwxrwx--x. 2 boinc boinc      4096 Mar  7 09:55 shared
[2026-03-07 11:34:27] -rw-r--r--. 2 boinc boinc    597943 Mar  7 09:55 input.tar.gz
[2026-03-07 11:34:27] -rw-r--r--. 1 boinc boinc         0 Mar  7 09:55 boinc_lockfile
[2026-03-07 11:34:27] -rw-r--r--. 1 boinc boinc      2565 Mar  7 09:55 pandaJob.out
[2026-03-07 11:34:27] -rw-------. 1 boinc boinc    999161 Mar  7 09:56 agis_schedconf.cvmfs.json
[2026-03-07 11:34:27] -rw-------. 1 boinc boinc   1521291 Mar  7 09:56 agis_ddmendpoints.agis.ALL.json
[2026-03-07 11:34:27] -rw-------. 1 boinc boinc       443 Mar  7 09:56 workernode_map.json
[2026-03-07 11:34:27] drwx------. 5 boinc boinc      4096 Mar  7 09:56 pilot3
[2026-03-07 11:34:27] -rw-r--r--. 1 boinc boinc       529 Mar  7 11:32 boinc_task_state.xml
[2026-03-07 11:34:27] -rw-------. 1 boinc boinc 196232273 Mar  7 11:32 HITS.48967030._000520.pool.root.1
[2026-03-07 11:34:27] -rw-------. 1 boinc boinc        95 Mar  7 11:32 pilot_heartbeat.json
[2026-03-07 11:34:27] -rw-------. 1 boinc boinc      1031 Mar  7 11:33 memory_monitor_summary.json
[2026-03-07 11:34:27] -rw-------. 1 boinc boinc    291653 Mar  7 11:33 log.48967030._000520.job.log.tgz.1
[2026-03-07 11:34:27] -rw-------. 1 boinc boinc      6348 Mar  7 11:33 heartbeat.json
[2026-03-07 11:34:27] -rw-r--r--. 1 boinc boinc        27 Mar  7 11:34 wrapper_checkpoint.txt
[2026-03-07 11:34:27] -rw-r--r--. 1 boinc boinc      8192 Mar  7 11:34 boinc_mmap_file
[2026-03-07 11:34:27] -rw-------. 1 boinc boinc      5087 Mar  7 11:34 pilotlog.txt
[2026-03-07 11:34:27] -rw-------. 1 boinc boinc    843955 Mar  7 11:34 log.48967030._000520.job.log.1
[2026-03-07 11:34:27] -rw-------. 1 boinc boinc       357 Mar  7 11:34 output.list
[2026-03-07 11:34:27] -rw-r--r--. 1 boinc boinc       620 Mar  7 11:34 runtime_log
[2026-03-07 11:34:27] -rw-------. 1 boinc boinc   1157120 Mar  7 11:34 result.tar.gz
[2026-03-07 11:34:27] -rw-------. 1 boinc boinc       663 Mar  7 11:34 xK3NDmX6hI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmmbRLDmgJfOMo.diag
[2026-03-07 11:34:27] -rw-r--r--. 1 boinc boinc      9204 Mar  7 11:34 runtime_log.err
[2026-03-07 11:34:27] -rw-r--r--. 1 boinc boinc     21392 Mar  7 11:34 stderr.txt
[2026-03-07 11:34:27] HITS file was successfully produced:
[2026-03-07 11:34:27] -rw-------. 1 boinc boinc 196232273 Mar  7 11:32 shared/HITS.pool.root.1
[2026-03-07 11:34:27]  *** Contents of shared directory: ***
[2026-03-07 11:34:27] total 401564
[2026-03-07 11:34:27] -rw-r--r--. 2 boinc boinc 213181235 Mar  7 09:55 ATLAS.root_0
[2026-03-07 11:34:27] -rw-r--r--. 2 boinc boinc     15845 Mar  7 09:55 start_atlas.sh
[2026-03-07 11:34:27] -rw-r--r--. 2 boinc boinc    597943 Mar  7 09:55 input.tar.gz
[2026-03-07 11:34:27] -rw-------. 1 boinc boinc 196232273 Mar  7 11:32 HITS.pool.root.1
[2026-03-07 11:34:27] -rw-------. 1 boinc boinc   1157120 Mar  7 11:34 result.tar.gz
11:34:29 (2533313): run_atlas exited; CPU time 22510.060878
11:34:29 (2533313): called boinc_finish(0)

</stderr_txt>
]]>

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