Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-09 15:10:30 (12220): vboxwrapper version 26210
2026-03-09 15:10:30 (12220): BOINC client version: 8.2.8
2026-03-09 15:10:31 (12220): Detected: VirtualBox VboxManage Interface (Version: 6.1.2)
2026-03-09 15:10:31 (12220): Successfully copied 'init_data.xml' to the shared directory.
2026-03-09 15:10:32 (12220): Create VM. (boinc_85855029bee2f0d2, slot#0)
2026-03-09 15:10:32 (12220): Setting Memory Size for VM. (4400MB)
2026-03-09 15:10:32 (12220): Setting CPU Count for VM. (4)
2026-03-09 15:10:33 (12220): Setting Chipset Options for VM.
2026-03-09 15:10:33 (12220): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-09 15:10:33 (12220): Setting Boot Options for VM.
2026-03-09 15:10:34 (12220): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-09 15:10:34 (12220): Enabling VM Network Access.
2026-03-09 15:10:34 (12220): Disabling USB Support for VM.
2026-03-09 15:10:35 (12220): Disabling COM Port Support for VM.
2026-03-09 15:10:35 (12220): Disabling LPT Port Support for VM.
2026-03-09 15:10:35 (12220): Disabling Audio Support for VM.
2026-03-09 15:10:35 (12220): Disabling Clipboard Support for VM.
2026-03-09 15:10:36 (12220): Disabling Drag and Drop Support for VM.
2026-03-09 15:10:36 (12220): Adding storage controller(s) to VM.
2026-03-09 15:10:37 (12220): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-09 15:10:38 (12220): Adding VirtualBox Guest Additions to VM.
2026-03-09 15:10:38 (12220): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-09 15:10:38 (12220): forwarding host port 52466 to guest port 80
2026-03-09 15:10:39 (12220): Enabling remote desktop for VM.
2026-03-09 15:10:39 (12220): Required extension pack not installed, remote desktop not enabled.
2026-03-09 15:10:39 (12220): Enabling shared directory for VM.
2026-03-09 15:10:39 (12220): Starting VM using VBoxManage interface. (boinc_85855029bee2f0d2, slot#0)
2026-03-09 15:10:44 (12220): Successfully started VM. (PID = '7448')
2026-03-09 15:10:44 (12220): Reporting VM Process ID to BOINC.
2026-03-09 15:10:44 (12220): Guest Log: BIOS: VirtualBox 6.1.2
2026-03-09 15:10:44 (12220): Guest Log: CPUID EDX: 0x178bfbff
2026-03-09 15:10:44 (12220): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-09 15:10:44 (12220): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-09 15:10:44 (12220): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-09 15:10:44 (12220): Detected: Web Application Enabled (http://localhost:52466)
2026-03-09 15:10:44 (12220): Preference change detected
2026-03-09 15:10:44 (12220): Setting CPU throttle for VM. (90%)
2026-03-09 15:10:44 (12220): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-09 15:10:46 (12220): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-09 15:10:46 (12220): Guest Log: BIOS: Booting from Hard Disk...
2026-03-09 15:10:49 (12220): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-09 15:10:49 (12220): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-09 15:10:49 (12220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-09 15:10:55 (12220): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-09 15:10:55 (12220): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-09 15:11:06 (12220): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-09 15:11:06 (12220): Guest Log: 00:00:00.000129 main     Log opened 2026-03-09T15:11:04.656361000Z
2026-03-09 15:11:06 (12220): Guest Log: 00:00:00.000200 main     OS Product: Linux
2026-03-09 15:11:06 (12220): Guest Log: 00:00:00.000234 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-09 15:11:06 (12220): Guest Log: 00:00:00.000257 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-09 15:11:06 (12220): Guest Log: 00:00:00.000280 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-09 15:11:06 (12220): Guest Log: 00:00:00.000280 main     Process ID: 1325
2026-03-09 15:11:06 (12220): Guest Log: 00:00:00.000281 main     Package type: LINUX_64BITS_GENERIC
2026-03-09 15:11:06 (12220): Guest Log: 00:00:00.002708 main     5.2.32 r132073 started. Verbose level = 0
2026-03-09 15:11:06 (12220): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-09 15:11:06 (12220): Guest Log: [INFO] Mounting shared directory
2026-03-09 15:11:06 (12220): Guest Log: [INFO] Checking for init_data.xml
2026-03-09 15:11:16 (12220): Guest Log: 00:00:10.006296 timesync vgsvcTimeSyncWorker: Radical guest time change: -37 788 728 253 000ns (GuestNow=1 773 031 275 933 121 000 ns GuestLast=1 773 069 064 661 374 000 ns fSetTimeLastLoop=true )
2026-03-09 15:11:19 (12220): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-09 15:11:19 (12220): Guest Log: [INFO] Detected branch: prod
2026-03-09 15:11:20 (12220): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-09 15:11:20 (12220): Guest Log: Copying input files
2026-03-09 15:11:23 (12220): Guest Log: Copied input files into RunAtlas.
2026-03-09 15:11:23 (12220): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-09 15:11:23 (12220): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-09 15:11:23 (12220): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-09 15:11:23 (12220): Guest Log: Further information can be found at the LHC@home message board.
2026-03-09 15:11:33 (12220): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-09 15:11:34 (12220): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-09 15:11:34 (12220): Guest Log: 2.6.3.0 1603 0 32148 157065 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-09 15:11:36 (12220): Guest Log: copied the webapp to /var/www
2026-03-09 15:11:36 (12220): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-09 15:11:36 (12220): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-09 15:11:37 (12220): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-09 15:11:37 (12220): Guest Log:  *** Starting ATLAS job. (PandaID=7043066743 taskID=48967030) ***
2026-03-09 16:10:57 (12220): VM state change detected. (old = 'running', new = 'paused')
2026-03-09 17:35:07 (12220): Guest Log: 00:59:51.581059 timesync vgsvcTimeSyncWorker: Radical host time change: 5 059 620 000 000ns (HostNow=1 773 039 907 124 000 000 ns HostLast=1 773 034 847 504 000 000 ns)
2026-03-09 17:35:07 (12220): VM state change detected. (old = 'paused', new = 'running')
2026-03-09 17:35:17 (12220): Guest Log: 01:00:01.589267 timesync vgsvcTimeSyncWorker: Radical guest time change: 5 059 624 707 000ns (GuestNow=1 773 039 917 132 284 000 ns GuestLast=1 773 034 857 507 577 000 ns fSetTimeLastLoop=true )
2026-03-09 18:14:59 (12220): Status Report: Elapsed Time: '6000.000000'
2026-03-09 18:14:59 (12220): Status Report: CPU Time: '18547.718750'
2026-03-09 18:35:32 (12220): VM state change detected. (old = 'running', new = 'paused')
2026-03-09 19:59:57 (12220): VM state change detected. (old = 'paused', new = 'running')
2026-03-09 20:00:03 (12220): Guest Log: 02:00:22.820939 timesync vgsvcTimeSyncWorker: Radical host time change: 5 075 176 000 000ns (HostNow=1 773 048 603 521 000 000 ns HostLast=1 773 043 528 345 000 000 ns)
2026-03-09 20:00:13 (12220): Guest Log: 02:00:32.821828 timesync vgsvcTimeSyncWorker: Radical guest time change: 5 075 163 142 000ns (GuestNow=1 773 048 613 524 300 000 ns GuestLast=1 773 043 538 361 158 000 ns fSetTimeLastLoop=true )
2026-03-09 21:19:30 (12220): Status Report: Elapsed Time: '12000.000000'
2026-03-09 21:19:30 (12220): Status Report: CPU Time: '40173.421875'
2026-03-09 21:52:40 (12220): Guest Log:  *** Job finished ***
2026-03-09 21:52:40 (12220): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-09 21:52:40 (12220): Guest Log: 2026-03-09 11:22:34,884 | INFO     | all workflow threads have been joined
2026-03-09 21:52:40 (12220): Guest Log: 2026-03-09 11:22:34,884 | INFO     | end of generic workflow (traces error code: 0)
2026-03-09 21:52:40 (12220): Guest Log: 2026-03-09 11:22:34,884 | INFO     | traces error code: 0
2026-03-09 21:52:40 (12220): Guest Log: 2026-03-09 11:22:34,884 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-09 21:52:40 (12220): Guest Log: 2026-03-09 11:22:38,514 | INFO     | PID=6014 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-09 21:52:40 (12220): Guest Log: 2026-03-09 11:22:38,514 | INFO     | found 0 job(s) in 20 queues
2026-03-09 21:52:40 (12220): Guest Log: 2026-03-09 11:22:38,514 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-09 21:52:40 (12220): Guest Log: 2026-03-09 11:22:38,514 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-09 21:52:40 (12220): Guest Log: 2026-03-09 11:22:38,514 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-09 21:52:40 (12220): Guest Log: 2026-03-09 11:22:38,515 | INFO     | [monitor] control thread has ended
2026-03-09 21:52:40 (12220): Guest Log: 2026-03-09 11:22:38,676 [wrapper] ==== pilot stdout END ====
2026-03-09 21:52:40 (12220): Guest Log: 2026-03-09 11:22:38,680 [wrapper] ==== wrapper stdout RESUME ====
2026-03-09 21:52:40 (12220): Guest Log: 2026-03-09 11:22:38,684 [wrapper] pilotpid: 6014
2026-03-09 21:52:40 (12220): Guest Log: 2026-03-09 11:22:38,687 [wrapper] Pilot exit status: 0
2026-03-09 21:52:40 (12220): Guest Log: 2026-03-09 11:22:39,298 [wrapper] pandaids: 7043066743
2026-03-09 21:52:40 (12220): Guest Log: 2026-03-09 11:22:39,322 [wrapper] cleanup supervisor_pilot 27580 6015
2026-03-09 21:52:40 (12220): Guest Log: 2026-03-09 11:22:39,331 [wrapper] Test setup, not cleaning
2026-03-09 21:52:40 (12220): Guest Log: 2026-03-09 11:22:39,336 [wrapper] apfmon messages muted
2026-03-09 21:52:40 (12220): Guest Log: 2026-03-09 11:22:39,340 [wrapper] ==== wrapper stdout END ====
2026-03-09 21:52:40 (12220): Guest Log: 2026-03-09 11:22:39,343 [wrapper] ==== wrapper stderr END ====
2026-03-09 21:52:40 (12220): Guest Log:  *** Error codes and diagnostics ***
2026-03-09 21:52:40 (12220): Guest Log:     "exeErrorCode": 0,
2026-03-09 21:52:40 (12220): Guest Log:     "exeErrorDiag": "",
2026-03-09 21:52:40 (12220): Guest Log:     "pilotErrorCode": 0,
2026-03-09 21:52:40 (12220): Guest Log:     "pilotErrorDiag": "",
2026-03-09 21:52:40 (12220): Guest Log:  *** Listing of results directory ***
2026-03-09 21:52:40 (12220): Guest Log: total 199736
2026-03-09 21:52:40 (12220): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  6 10:24 pilot3.tar.gz
2026-03-09 21:52:40 (12220): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  6 10:27 runpilot2-wrapper.sh
2026-03-09 21:52:40 (12220): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  6 10:28 queuedata.json
2026-03-09 21:52:40 (12220): Guest Log: -rwxr-xr-x. 1 atlas atlas      5898 Mar  9 04:41 init_data.xml
2026-03-09 21:52:40 (12220): Guest Log: -rwxr-xr-x. 1 atlas atlas    597944 Mar  9 04:41 input.tar.gz
2026-03-09 21:52:40 (12220): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  9 04:41 start_atlas.sh
2026-03-09 21:52:40 (12220): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  9 04:41 EVNT.48967027._000057.pool.root.1 -> /data/./ATLAS.root_0
2026-03-09 21:52:40 (12220): Guest Log: -rw-r--r--. 1 atlas atlas      2565 Mar  9 04:41 pandaJob.out
2026-03-09 21:52:40 (12220): Guest Log: -rw-------. 1 atlas atlas    999108 Mar  9 04:44 agis_schedconf.cvmfs.json
2026-03-09 21:52:40 (12220): Guest Log: -rw-------. 1 atlas atlas       425 Mar  9 04:44 workernode_map.json
2026-03-09 21:52:40 (12220): Guest Log: drwx------. 5 atlas atlas      4096 Mar  9 04:44 pilot3
2026-03-09 21:52:40 (12220): Guest Log: -rw-------. 1 atlas atlas 196046787 Mar  9 11:21 HITS.48967030._000282.pool.root.1
2026-03-09 21:52:40 (12220): Guest Log: -rw-------. 1 atlas atlas      1034 Mar  9 11:21 memory_monitor_summary.json
2026-03-09 21:52:40 (12220): Guest Log: -rw-------. 1 atlas atlas   1511578 Mar  9 11:22 agis_ddmendpoints.agis.ALL.json
2026-03-09 21:52:40 (12220): Guest Log: -rw-------. 1 atlas atlas    389151 Mar  9 11:22 log.48967030._000282.job.log.tgz.1
2026-03-09 21:52:40 (12220): Guest Log: -rw-------. 1 atlas atlas      6368 Mar  9 11:22 heartbeat.json
2026-03-09 21:52:40 (12220): Guest Log: -rw-------. 1 atlas atlas       744 Mar  9 11:22 pilotlog.txt
2026-03-09 21:52:40 (12220): Guest Log: -rw-------. 1 atlas atlas        97 Mar  9 11:22 pilot_heartbeat.json
2026-03-09 21:52:40 (12220): Guest Log: -rw-------. 1 atlas atlas   1928993 Mar  9 11:22 log.48967030._000282.job.log.1
2026-03-09 21:52:40 (12220): Guest Log: -rw-------. 1 atlas atlas       357 Mar  9 11:22 output.list
2026-03-09 21:52:40 (12220): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  9 11:22 runtime_log
2026-03-09 21:52:40 (12220): Guest Log: -rw-------. 1 atlas atlas   2334720 Mar  9 11:22 result.tar.gz
2026-03-09 21:52:40 (12220): Guest Log: -rw-r--r--. 1 atlas atlas      8779 Mar  9 11:22 runtime_log.err
2026-03-09 21:52:40 (12220): Guest Log: -rw-------. 1 atlas atlas       667 Mar  9 11:22 6s2NDmCahI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmFKPLDmlsABEn.diag
2026-03-09 21:52:40 (12220): Guest Log: Looking for outputfile HITS.48967030._000282.pool.root.1
2026-03-09 21:52:40 (12220): Guest Log: HITS file was successfully produced
2026-03-09 21:52:40 (12220): Guest Log: -rw-------. 1 atlas atlas 196046787 Mar  9 11:21 /home/atlas/RunAtlas/HITS.48967030._000282.pool.root.1
2026-03-09 21:52:41 (12220): Guest Log: Successfully finished the ATLAS job!
2026-03-09 21:52:41 (12220): Guest Log: Copying the results back to the shared directory!
2026-03-09 21:52:41 (12220): Guest Log:  *** Contents of shared directory: ***
2026-03-09 21:52:41 (12220): Guest Log: total 405124
2026-03-09 21:52:41 (12220): Guest Log: -rwxrwxrwx. 1 root root 215839644 Mar  9 04:40 ATLAS.root_0
2026-03-09 21:52:41 (12220): Guest Log: -rwxrwxrwx. 1 root root 196046787 Mar  9 11:22 HITS.pool.root.1
2026-03-09 21:52:41 (12220): Guest Log: -rwxrwxrwx. 1 root root      5898 Mar  9 04:40 init_data.xml
2026-03-09 21:52:41 (12220): Guest Log: -rwxrwxrwx. 1 root root    597944 Mar  6 12:32 input.tar.gz
2026-03-09 21:52:41 (12220): Guest Log: -rwxrwxrwx. 1 root root   2334720 Mar  9 11:22 result.tar.gz
2026-03-09 21:52:41 (12220): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  6 12:32 start_atlas.sh
2026-03-09 21:52:41 (12220): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-09 21:52:41 (12220): VM Completion File Detected.
2026-03-09 21:52:41 (12220): Powering off VM.
2026-03-09 21:52:42 (12220): Successfully stopped VM.
2026-03-09 21:52:42 (12220): Deregistering VM. (boinc_85855029bee2f0d2, slot#0)
2026-03-09 21:52:42 (12220): Removing network bandwidth throttle group from VM.
2026-03-09 21:52:42 (12220): Removing VM from VirtualBox.
2026-03-09 21:52:47 (12220): called boinc_finish(0)

</stderr_txt>
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