Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:04:29 (2342724): wrapper (7.7.26015): starting
09:04:29 (2342724): wrapper: running run_atlas (--nthreads 9)
[2026-03-06 09:04:29] Arguments: --nthreads 9
[2026-03-06 09:04:29] Threads: 9
[2026-03-06 09:04:29] Checking for CVMFS
[2026-03-06 09:04:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 09:04:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 09:04:29] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 09:04:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 09:04:30] 2.13.3.0 1019478 97666 139364 156958 1 164 31029319 39288833 9957 16776704 0 56870763 99.599 64130200 37143 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-06 09:04:30] CVMFS is ok
[2026-03-06 09:04:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 09:04:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 09:04:30] Further information can be found at the LHC@home message board.
[2026-03-06 09:04:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 09:04:30] Checking for apptainer binary...
[2026-03-06 09:04:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-06 09:04:30] Running /usr/bin/apptainer --version
[2026-03-06 09:04:30] apptainer version 1.4.5-2.el9
[2026-03-06 09:04:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 09:04:30] c-210-25.aglt2.org
[2026-03-06 09:04:30] apptainer works
[2026-03-06 09:04:30] Set ATHENA_PROC_NUMBER=9
[2026-03-06 09:04:30] Set ATHENA_CORE_NUMBER=9
[2026-03-06 09:04:30] Starting ATLAS job with PandaID=7042960005
[2026-03-06 09:04:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 15:35:48]  *** The last 200 lines of the pilot log: ***
[2026-03-06 15:35:48] 2026-03-06 20:34:38,919 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 15:35:48] 2026-03-06 20:34:38,931 | INFO     | fitting pss+swap vs Time
[2026-03-06 15:35:48] 2026-03-06 20:34:38,932 | INFO     | sum of square deviations: 17421314227.994698
[2026-03-06 15:35:48] 2026-03-06 20:34:38,936 | INFO     | sum of deviations: 64868238640.485634
[2026-03-06 15:35:48] 2026-03-06 20:34:38,936 | INFO     | mean x: 1772817568.6422977
[2026-03-06 15:35:48] 2026-03-06 20:34:38,936 | INFO     | mean y: 2558594.2663185378
[2026-03-06 15:35:48] 2026-03-06 20:34:38,937 | INFO     | intersect: -6598525089.99091
[2026-03-06 15:35:48] 2026-03-06 20:34:38,937 | INFO     | chi2: 1.3113901189027066
[2026-03-06 15:35:48] 2026-03-06 20:34:38,938 | INFO     | sum of square deviations: 16747948859.70363
[2026-03-06 15:35:48] 2026-03-06 20:34:38,942 | INFO     | sum of deviations: 62805919307.40748
[2026-03-06 15:35:48] 2026-03-06 20:34:38,942 | INFO     | mean x: 1772817416.148148
[2026-03-06 15:35:48] 2026-03-06 20:34:38,942 | INFO     | mean y: 2558127.224867725
[2026-03-06 15:35:48] 2026-03-06 20:34:38,942 | INFO     | intersect: -6645624794.641155
[2026-03-06 15:35:48] 2026-03-06 20:34:38,943 | INFO     | chi2: 1.311546330056941
[2026-03-06 15:35:48] 2026-03-06 20:34:38,943 | INFO     | current chi2=1.311546330056941 (change=-0.011911875191272063 %)
[2026-03-06 15:35:48] 2026-03-06 20:34:38,943 | INFO     | right removable region: 377
[2026-03-06 15:35:48] 2026-03-06 20:34:38,944 | INFO     | sum of square deviations: 16747821918.404753
[2026-03-06 15:35:48] 2026-03-06 20:34:38,947 | INFO     | sum of deviations: 13099472223.833328
[2026-03-06 15:35:48] 2026-03-06 20:34:38,948 | INFO     | mean x: 1772817721.1507936
[2026-03-06 15:35:48] 2026-03-06 20:34:38,948 | INFO     | mean y: 2570232.722222222
[2026-03-06 15:35:48] 2026-03-06 20:34:38,948 | INFO     | intersect: -1384056434.8693287
[2026-03-06 15:35:48] 2026-03-06 20:34:38,949 | INFO     | chi2: 0.039028564049774776
[2026-03-06 15:35:48] 2026-03-06 20:34:38,949 | INFO     | current chi2=0.039028564049774776 (change=97.0238784411132 %)
[2026-03-06 15:35:48] 2026-03-06 20:34:38,949 | INFO     | sum of square deviations: 16091911333.758753
[2026-03-06 15:35:48] 2026-03-06 20:34:38,953 | INFO     | sum of deviations: 19654911162.209118
[2026-03-06 15:35:48] 2026-03-06 20:34:38,953 | INFO     | mean x: 1772817873.6595175
[2026-03-06 15:35:48] 2026-03-06 20:34:38,953 | INFO     | mean y: 2568706.8284182306
[2026-03-06 15:35:48] 2026-03-06 20:34:38,954 | INFO     | intersect: -2162778658.7424355
[2026-03-06 15:35:48] 2026-03-06 20:34:38,954 | INFO     | chi2: 0.0032587633108757115
[2026-03-06 15:35:48] 2026-03-06 20:34:38,954 | INFO     | current chi2=0.0032587633108757115 (change=91.65031204653168 %)
[2026-03-06 15:35:48] 2026-03-06 20:34:38,955 | INFO     | sum of square deviations: 15453440802.858711
[2026-03-06 15:35:48] 2026-03-06 20:34:38,958 | INFO     | sum of deviations: 16747210071.56521
[2026-03-06 15:35:48] 2026-03-06 20:34:38,959 | INFO     | mean x: 1772818026.1576087
[2026-03-06 15:35:48] 2026-03-06 20:34:38,959 | INFO     | mean y: 2569400.8695652173
[2026-03-06 15:35:48] 2026-03-06 20:34:38,959 | INFO     | intersect: -1918669776.9598017
[2026-03-06 15:35:48] 2026-03-06 20:34:38,960 | INFO     | chi2: 0.0021042467640145462
[2026-03-06 15:35:48] 2026-03-06 20:34:38,960 | INFO     | current chi2=0.0021042467640145462 (change=35.42805772386451 %)
[2026-03-06 15:35:48] 2026-03-06 20:34:38,960 | INFO     | sum of square deviations: 14831997200.666637
[2026-03-06 15:35:48] 2026-03-06 20:34:38,964 | INFO     | sum of deviations: 15158533850.333334
[2026-03-06 15:35:48] 2026-03-06 20:34:38,964 | INFO     | mean x: 1772818178.6666667
[2026-03-06 15:35:48] 2026-03-06 20:34:38,964 | INFO     | mean y: 2569789.9283746555
[2026-03-06 15:35:48] 2026-03-06 20:34:38,964 | INFO     | intersect: -1809278203.8534143
[2026-03-06 15:35:48] 2026-03-06 20:34:38,965 | INFO     | chi2: 0.0018170020607059137
[2026-03-06 15:35:48] 2026-03-06 20:34:38,965 | INFO     | current chi2=0.0018170020607059137 (change=13.650713795592031 %)
[2026-03-06 15:35:48] 2026-03-06 20:34:38,965 | INFO     | left removable region: 40
[2026-03-06 15:35:48] 2026-03-06 20:34:38,966 | INFO     | sum of square deviations: 11867548469.080112
[2026-03-06 15:35:48] 2026-03-06 20:34:38,969 | INFO     | sum of deviations: 11293801860.37389
[2026-03-06 15:35:48] 2026-03-06 20:34:38,969 | INFO     | mean x: 1772818605.712166
[2026-03-06 15:35:48] 2026-03-06 20:34:38,969 | INFO     | mean y: 2569993.3234421364
[2026-03-06 15:35:48] 2026-03-06 20:34:38,969 | INFO     | intersect: -1684540206.3494525
[2026-03-06 15:35:48] 2026-03-06 20:34:38,970 | INFO     | chi2: 0.0015696721296474421
[2026-03-06 15:35:48] 2026-03-06 20:34:38,970 | INFO     | current memory leak: 0.95 B/s (using 337 data points, chi2=0.00)
[2026-03-06 15:35:48] 2026-03-06 20:34:38,971 | INFO     | could have reported an average CPU frequency of 2600 MHz (16 samples)
[2026-03-06 15:35:48] 2026-03-06 20:34:38,971 | INFO     | ..............................
[2026-03-06 15:35:48] 2026-03-06 20:34:38,971 | INFO     | . Timing measurements:
[2026-03-06 15:35:48] 2026-03-06 20:34:38,971 | INFO     | . get job = 0 s
[2026-03-06 15:35:48] 2026-03-06 20:34:38,971 | INFO     | . initial setup = 10 s
[2026-03-06 15:35:48] 2026-03-06 20:34:38,972 | INFO     | . payload setup = 8 s
[2026-03-06 15:35:48] 2026-03-06 20:34:38,972 | INFO     | . stage-in = 0 s
[2026-03-06 15:35:48] 2026-03-06 20:34:38,972 | INFO     | . payload execution = 23359 s
[2026-03-06 15:35:48] 2026-03-06 20:34:38,972 | INFO     | . stage-out = 2 s
[2026-03-06 15:35:48] 2026-03-06 20:34:38,972 | INFO     | . log creation = 0 s
[2026-03-06 15:35:48] 2026-03-06 20:34:38,972 | INFO     | ..............................
[2026-03-06 15:35:48] 2026-03-06 20:34:39,034 | INFO     | time since job start (23381s) is within the limit (349056.0s)
[2026-03-06 15:35:48] 2026-03-06 20:34:39,115 | INFO     | 
[2026-03-06 15:35:48] 2026-03-06 20:34:39,116 | INFO     | job summary report
[2026-03-06 15:35:48] 2026-03-06 20:34:39,116 | INFO     | --------------------------------------------------
[2026-03-06 15:35:48] 2026-03-06 20:34:39,116 | INFO     | PanDA job id: 7042960005
[2026-03-06 15:35:48] 2026-03-06 20:34:39,116 | INFO     | task id: 48966988
[2026-03-06 15:35:48] 2026-03-06 20:34:39,117 | INFO     | errors: (none)
[2026-03-06 15:35:48] 2026-03-06 20:34:39,117 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 15:35:48] 2026-03-06 20:34:39,117 | INFO     | pilot state: finished 
[2026-03-06 15:35:48] 2026-03-06 20:34:39,117 | INFO     | transexitcode: 0
[2026-03-06 15:35:48] 2026-03-06 20:34:39,117 | INFO     | exeerrorcode: 0
[2026-03-06 15:35:48] 2026-03-06 20:34:39,117 | INFO     | exeerrordiag: 
[2026-03-06 15:35:48] 2026-03-06 20:34:39,117 | INFO     | exitcode: 0
[2026-03-06 15:35:48] 2026-03-06 20:34:39,117 | INFO     | exitmsg: OK
[2026-03-06 15:35:48] 2026-03-06 20:34:39,118 | INFO     | cpuconsumptiontime: 61460 s
[2026-03-06 15:35:48] 2026-03-06 20:34:39,118 | INFO     | nevents: 400
[2026-03-06 15:35:48] 2026-03-06 20:34:39,118 | INFO     | neventsw: 0
[2026-03-06 15:35:48] 2026-03-06 20:34:39,118 | INFO     | pid: 2351115
[2026-03-06 15:35:48] 2026-03-06 20:34:39,118 | INFO     | pgrp: 2351115
[2026-03-06 15:35:48] 2026-03-06 20:34:39,118 | INFO     | corecount: 9
[2026-03-06 15:35:48] 2026-03-06 20:34:39,118 | INFO     | event service: False
[2026-03-06 15:35:48] 2026-03-06 20:34:39,118 | INFO     | sizes: {0: 2295407, 1: 2295868, 23372: 2330648, 23376: 2339646, 23379: 2339896}
[2026-03-06 15:35:48] 2026-03-06 20:34:39,118 | INFO     | --------------------------------------------------
[2026-03-06 15:35:48] 2026-03-06 20:34:39,119 | INFO     | 
[2026-03-06 15:35:48] 2026-03-06 20:34:39,119 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-06 15:35:48] 2026-03-06 20:34:39,241 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 15:35:48] 2026-03-06 20:34:39,241 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 15:35:48] 2026-03-06 20:34:39,242 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 15:35:48] 2026-03-06 20:34:39,242 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 15:35:48] 2026-03-06 20:34:39,242 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 15:35:48] 2026-03-06 20:34:39,242 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 15:35:48] 2026-03-06 20:34:39,242 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 15:35:48] 2026-03-06 20:34:39,242 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 15:35:48] 2026-03-06 20:34:39,242 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 15:35:48] 2026-03-06 20:34:39,242 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 15:35:48] 2026-03-06 20:34:39,243 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 15:35:48] 2026-03-06 20:34:39,243 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 15:35:48] 2026-03-06 20:34:39,243 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 15:35:48] 2026-03-06 20:34:39,243 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 15:35:48] 2026-03-06 20:34:39,243 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 15:35:48] 2026-03-06 20:34:39,243 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 15:35:48] 2026-03-06 20:34:39,243 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 15:35:48] 2026-03-06 20:34:39,243 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 15:35:48] 2026-03-06 20:34:39,244 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 15:35:48] 2026-03-06 20:34:39,244 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 15:35:48] 2026-03-06 20:34:39,244 | INFO     | job 7042960005 has completed (purged errors)
[2026-03-06 15:35:48] 2026-03-06 20:34:39,244 | INFO     | overall cleanup function is called
[2026-03-06 15:35:48] 2026-03-06 20:34:40,262 | INFO     | --- collectZombieJob: --- 10, [2351115]
[2026-03-06 15:35:48] 2026-03-06 20:34:40,262 | INFO     | zombie collector waiting for pid 2351115
[2026-03-06 15:35:48] 2026-03-06 20:34:40,262 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 15:35:48] 2026-03-06 20:34:40,262 | INFO     | collected zombie processes
[2026-03-06 15:35:48] 2026-03-06 20:34:40,262 | INFO     | will attempt to kill all subprocesses of pid=2351115
[2026-03-06 15:35:48] 2026-03-06 20:34:40,571 | INFO     | process IDs to be killed: [2351115] (in reverse order)
[2026-03-06 15:35:48] 2026-03-06 20:34:40,652 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 15:35:48] 2026-03-06 20:34:40,653 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 15:35:48] 2026-03-06 20:34:40,667 | INFO     | did not find any defunct processes belonging to 2351115
[2026-03-06 15:35:48] 2026-03-06 20:34:40,674 | INFO     | did not find any defunct processes belonging to 2351115
[2026-03-06 15:35:48] 2026-03-06 20:34:40,675 | INFO     | ready for new job
[2026-03-06 15:35:48] 2026-03-06 20:34:40,675 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 15:35:48] 2026-03-06 20:34:40,678 | INFO     | **************************************
[2026-03-06 15:35:48] 2026-03-06 20:34:40,679 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 15:35:48] 2026-03-06 20:34:40,679 | INFO     | **************************************
[2026-03-06 15:35:48] 2026-03-06 20:34:40,679 | INFO     | 
[2026-03-06 15:35:48] 2026-03-06 20:34:40,681 | INFO     | architecture information:
[2026-03-06 15:35:48] 2026-03-06 20:34:40,681 | INFO     | executing command: cat /etc/os-release
[2026-03-06 15:35:48] 2026-03-06 20:34:40,702 | INFO     | cat /etc/os-release:
[2026-03-06 15:35:48] NAME="CentOS Linux"
[2026-03-06 15:35:48] VERSION="7 (Core)"
[2026-03-06 15:35:48] ID="centos"
[2026-03-06 15:35:48] ID_LIKE="rhel fedora"
[2026-03-06 15:35:48] VERSION_ID="7"
[2026-03-06 15:35:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 15:35:48] ANSI_COLOR="0;31"
[2026-03-06 15:35:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 15:35:48] HOME_URL="https://www.centos.org/"
[2026-03-06 15:35:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 15:35:48] 
[2026-03-06 15:35:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 15:35:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 15:35:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 15:35:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 15:35:48] 
[2026-03-06 15:35:48] 2026-03-06 20:34:40,702 | INFO     | **************************************
[2026-03-06 15:35:48] 2026-03-06 20:34:41,206 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-06 15:35:48] 2026-03-06 20:34:41,305 | INFO     | sufficient remaining disk space (53587476480 B)
[2026-03-06 15:35:48] 2026-03-06 20:34:41,306 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 15:35:48] 2026-03-06 20:34:41,306 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 15:35:48] 2026-03-06 20:34:41,306 | INFO     | update_server=False
[2026-03-06 15:35:48] 2026-03-06 20:34:41,306 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 15:35:48] 2026-03-06 20:34:41,342 | INFO     | all job control threads have been joined
[2026-03-06 15:35:48] 2026-03-06 20:34:41,502 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 15:35:48] 2026-03-06 20:34:41,502 | INFO     | aborting loop
[2026-03-06 15:35:48] 2026-03-06 20:34:41,527 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 15:35:48] 2026-03-06 20:34:41,645 | INFO     | all payload control threads have been joined
[2026-03-06 15:35:48] 2026-03-06 20:34:42,312 | INFO     | [job] retrieve thread has finished
[2026-03-06 15:35:48] 2026-03-06 20:34:42,347 | INFO     | [job] control thread has finished
[2026-03-06 15:35:48] 2026-03-06 20:34:42,398 | INFO     | all data control threads have been joined
[2026-03-06 15:35:48] 2026-03-06 20:34:42,508 | INFO     | [job] job monitor thread has finished
[2026-03-06 15:35:48] 2026-03-06 20:34:42,540 | INFO     | [payload] validate_post thread has finished
[2026-03-06 15:35:48] 2026-03-06 20:34:42,650 | INFO     | [payload] control thread has finished
[2026-03-06 15:35:48] 2026-03-06 20:34:43,043 | INFO     | [payload] failed_post thread has finished
[2026-03-06 15:35:48] 2026-03-06 20:34:43,188 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 15:35:48] 2026-03-06 20:34:43,194 | INFO     | [job] validate thread has finished
[2026-03-06 15:35:48] 2026-03-06 20:34:43,285 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 15:35:48] 2026-03-06 20:34:43,406 | INFO     | [data] control thread has finished
[2026-03-06 15:35:48] 2026-03-06 20:34:43,415 | INFO     | [data] copytool_in thread has finished
[2026-03-06 15:35:48] 2026-03-06 20:34:43,534 | INFO     | [data] copytool_out thread has finished
[2026-03-06 15:35:48] 2026-03-06 20:34:43,641 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 15:35:48] 2026-03-06 20:34:43,792 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 15:35:48] 2026-03-06 20:34:44,129 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 15:35:48] 2026-03-06 20:34:44,564 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 15:35:48] 2026-03-06 20:34:45,135 | INFO     | [job] queue monitor thread has finished
[2026-03-06 15:35:48] 2026-03-06 20:34:48,573 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 15:35:48] 2026-03-06 20:34:52,357 [wrapper] supervise_pilot (15 min periods counter: 27)
[2026-03-06 15:35:48] 2026-03-06 20:35:12,462 | INFO     | PID=2346573 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 15:35:48] 2026-03-06 20:35:12,463 | INFO     | .. there are 6 such processes running
[2026-03-06 15:35:48] 2026-03-06 20:35:12,463 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 15:35:48] 2026-03-06 20:35:12,463 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 15:35:48] 2026-03-06 20:35:12,463 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 15:35:48] 2026-03-06 20:35:41,051 | INFO     | [monitor] cgroup control has ended
[2026-03-06 15:35:48] 2026-03-06 20:35:42,994 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139973853570880)>', '<ExcThread(monitor, started 139973504259840)>']
[2026-03-06 15:35:48] 2026-03-06 20:35:43,635 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 15:35:48] 2026-03-06 20:35:43,635 | INFO     | [monitor] control thread has ended
[2026-03-06 15:35:48] 2026-03-06 20:35:48,020 | INFO     | all workflow threads have been joined
[2026-03-06 15:35:48] 2026-03-06 20:35:48,020 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 15:35:48] 2026-03-06 20:35:48,020 | INFO     | traces error code: 0
[2026-03-06 15:35:48] 2026-03-06 20:35:48,021 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 15:35:48] 2026-03-06 20:35:48,195 [wrapper] ==== pilot stdout END ====
[2026-03-06 15:35:48] 2026-03-06 20:35:48,198 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 15:35:48] 2026-03-06 20:35:48,201 [wrapper] pilotpid: 2346573
[2026-03-06 15:35:48] 2026-03-06 20:35:48,203 [wrapper] Pilot exit status: 0
[2026-03-06 15:35:48] 2026-03-06 20:35:48,220 [wrapper] pandaids: 7042960005
[2026-03-06 15:35:48] 2026-03-06 20:35:48,270 [wrapper] cleanup supervisor_pilot 2926749 2346574
[2026-03-06 15:35:48] 2026-03-06 20:35:48,274 [wrapper] Test setup, not cleaning
[2026-03-06 15:35:48] 2026-03-06 20:35:48,278 [wrapper] apfmon messages muted
[2026-03-06 15:35:48] 2026-03-06 20:35:48,282 [wrapper] ==== wrapper stdout END ====
[2026-03-06 15:35:48] 2026-03-06 20:35:48,285 [wrapper] ==== wrapper stderr END ====
[2026-03-06 15:35:48]  *** Error codes and diagnostics ***
[2026-03-06 15:35:48]     "exeErrorCode": 0,
[2026-03-06 15:35:48]     "exeErrorDiag": "",
[2026-03-06 15:35:48]     "pilotErrorCode": 0,
[2026-03-06 15:35:48]     "pilotErrorDiag": "",
[2026-03-06 15:35:48]  *** Listing of results directory ***
[2026-03-06 15:35:48] total 413344
[2026-03-06 15:35:48] -rw-r--r--. 1 boincer umatlas    584627 Mar  6 02:34 pilot3.tar.gz
[2026-03-06 15:35:48] -rwx------. 1 boincer umatlas     36322 Mar  6 02:37 runpilot2-wrapper.sh
[2026-03-06 15:35:48] -rw-r--r--. 1 boincer umatlas      5111 Mar  6 02:39 queuedata.json
[2026-03-06 15:35:48] -rw-r--r--. 1 boincer umatlas       100 Mar  6 09:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 15:35:48] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  6 09:04 run_atlas
[2026-03-06 15:35:48] -rw-r--r--. 1 boincer umatlas       105 Mar  6 09:04 job.xml
[2026-03-06 15:35:48] -rw-r--r--. 2 boincer umatlas 214750484 Mar  6 09:04 EVNT.48966985._000053.pool.root.1
[2026-03-06 15:35:48] -rw-r--r--. 2 boincer umatlas     15845 Mar  6 09:04 start_atlas.sh
[2026-03-06 15:35:48] drwxrwx--x. 2 boincer umatlas      4096 Mar  6 09:04 shared
[2026-03-06 15:35:48] -rw-r--r--. 2 boincer umatlas    597957 Mar  6 09:04 input.tar.gz
[2026-03-06 15:35:48] -rw-r--r--. 1 boincer umatlas         0 Mar  6 09:04 boinc_lockfile
[2026-03-06 15:35:48] -rw-r--r--. 1 boincer umatlas      2589 Mar  6 09:04 pandaJob.out
[2026-03-06 15:35:48] -rw-------. 1 boincer umatlas        57 Mar  6 09:04 setup.sh.local
[2026-03-06 15:35:48] -rw-------. 1 boincer umatlas    998883 Mar  6 09:04 agis_schedconf.cvmfs.json
[2026-03-06 15:35:48] -rw-------. 1 boincer umatlas       434 Mar  6 09:04 workernode_map.json
[2026-03-06 15:35:48] drwx------. 5 boincer umatlas      4096 Mar  6 09:04 pilot3
[2026-03-06 15:35:48] -rw-r--r--. 1 boincer umatlas      6661 Mar  6 15:30 init_data.xml
[2026-03-06 15:35:48] -rw-------. 1 boincer umatlas 197399937 Mar  6 15:33 HITS.48966988._002482.pool.root.1
[2026-03-06 15:35:48] -rw-r--r--. 1 boincer umatlas       531 Mar  6 15:34 boinc_task_state.xml
[2026-03-06 15:35:48] -rw-------. 1 boincer umatlas        95 Mar  6 15:34 pilot_heartbeat.json
[2026-03-06 15:35:48] -rw-------. 1 boincer umatlas      1040 Mar  6 15:34 memory_monitor_summary.json
[2026-03-06 15:35:48] -rw-------. 1 boincer umatlas   1521291 Mar  6 15:34 agis_ddmendpoints.agis.ALL.json
[2026-03-06 15:35:48] -rw-------. 1 boincer umatlas    580243 Mar  6 15:34 log.48966988._002482.job.log.tgz.1
[2026-03-06 15:35:48] -rw-------. 1 boincer umatlas      6374 Mar  6 15:34 heartbeat.json
[2026-03-06 15:35:48] -rw-r--r--. 1 boincer umatlas      8192 Mar  6 15:35 boinc_mmap_file
[2026-03-06 15:35:48] -rw-r--r--. 1 boincer umatlas        28 Mar  6 15:35 wrapper_checkpoint.txt
[2026-03-06 15:35:48] -rw-------. 1 boincer umatlas      4819 Mar  6 15:35 pilotlog.txt
[2026-03-06 15:35:48] -rw-------. 1 boincer umatlas   3003869 Mar  6 15:35 log.48966988._002482.job.log.1
[2026-03-06 15:35:48] -rw-------. 1 boincer umatlas       357 Mar  6 15:35 output.list
[2026-03-06 15:35:48] -rw-r--r--. 1 boincer umatlas       620 Mar  6 15:35 runtime_log
[2026-03-06 15:35:48] -rw-------. 1 boincer umatlas   3604480 Mar  6 15:35 result.tar.gz
[2026-03-06 15:35:48] -rw-r--r--. 1 boincer umatlas      9342 Mar  6 15:35 runtime_log.err
[2026-03-06 15:35:48] -rw-------. 1 boincer umatlas       656 Mar  6 15:35 8vLLDmzveI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmalOLDmyVt0Io.diag
[2026-03-06 15:35:48] -rw-r--r--. 1 boincer umatlas     21015 Mar  6 15:35 stderr.txt
[2026-03-06 15:35:48] HITS file was successfully produced:
[2026-03-06 15:35:48] -rw-------. 1 boincer umatlas 197399937 Mar  6 15:33 shared/HITS.pool.root.1
[2026-03-06 15:35:48]  *** Contents of shared directory: ***
[2026-03-06 15:35:48] total 406624
[2026-03-06 15:35:48] -rw-r--r--. 2 boincer umatlas 214750484 Mar  6 09:04 ATLAS.root_0
[2026-03-06 15:35:48] -rw-r--r--. 2 boincer umatlas     15845 Mar  6 09:04 start_atlas.sh
[2026-03-06 15:35:48] -rw-r--r--. 2 boincer umatlas    597957 Mar  6 09:04 input.tar.gz
[2026-03-06 15:35:48] -rw-------. 1 boincer umatlas 197399937 Mar  6 15:33 HITS.pool.root.1
[2026-03-06 15:35:48] -rw-------. 1 boincer umatlas   3604480 Mar  6 15:35 result.tar.gz
15:35:49 (2342724): run_atlas exited; CPU time 61943.062807
15:35:49 (2342724): called boinc_finish(0)

</stderr_txt>
]]>

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