Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:46:27 (1487674): wrapper (7.7.26015): starting
16:46:27 (1487674): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 16:46:27] Arguments: --nthreads 4
[2026-03-10 16:46:27] Threads: 4
[2026-03-10 16:46:27] Checking for CVMFS
[2026-03-10 16:46:27] No cvmfs_config command found, will try listing directly
[2026-03-10 16:46:27] CVMFS is ok
[2026-03-10 16:46:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 16:46:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 16:46:27] Further information can be found at the LHC@home message board.
[2026-03-10 16:46:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 16:46:27] Checking for apptainer binary...
[2026-03-10 16:46:27] which: no apptainer in ((null))
[2026-03-10 16:46:27] apptainer is not installed, using version from CVMFS
[2026-03-10 16:46:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 16:46:27] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-03-10 16:46:27] apptainer works
[2026-03-10 16:46:27] Set ATHENA_PROC_NUMBER=4
[2026-03-10 16:46:27] Set ATHENA_CORE_NUMBER=4
[2026-03-10 16:46:27] Starting ATLAS job with PandaID=7042734082
[2026-03-10 16:46:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 20:16:23]  *** The last 200 lines of the pilot log: ***
[2026-03-10 20:16:23] 2026-03-10 18:52:17,371 | INFO     | time since job start (11124s) is within the limit (349056.0s)
[2026-03-10 20:16:23] 2026-03-10 18:52:17,560 | INFO     | job 7042734082 has state=finished
[2026-03-10 20:16:23] 2026-03-10 18:52:17,561 | INFO     | preparing for final server update for job 7042734082 in state='finished'
[2026-03-10 20:16:23] 2026-03-10 18:52:17,561 | INFO     | reading metadata from: /var/lib/boinc/var/slot108/slots/0/PanDA_Pilot-7042734082/jobReport.json
[2026-03-10 20:16:23] 2026-03-10 18:52:17,564 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot108/slots/0/workernode_map.json
[2026-03-10 20:16:23] 2026-03-10 18:52:17,564 | INFO     | this job has now completed (state=finished)
[2026-03-10 20:16:23] 2026-03-10 18:52:17,564 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 20:16:23] 2026-03-10 18:52:17,564 | INFO     | log transfer has been attempted: DONE
[2026-03-10 20:16:23] 2026-03-10 18:52:17,564 | INFO     | job 7042734082 has finished - writing final server update
[2026-03-10 20:16:23] 2026-03-10 18:52:17,565 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_14353/.job.ad'
[2026-03-10 20:16:23] 2026-03-10 18:52:17,565 | INFO     | total number of processed events: 400 (read)
[2026-03-10 20:16:23] 2026-03-10 18:52:17,590 | INFO     | using path: /var/lib/boinc/var/slot108/slots/0/PanDA_Pilot-7042734082/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 20:16:23] 2026-03-10 18:52:17,591 | INFO     | extracted standard info from prmon json
[2026-03-10 20:16:23] 2026-03-10 18:52:17,591 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 20:16:23] 2026-03-10 18:52:17,591 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 20:16:23] 2026-03-10 18:52:17,591 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 20:16:23] 2026-03-10 18:52:17,591 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 20:16:23] 2026-03-10 18:52:17,595 | INFO     | fitting pss+swap vs Time
[2026-03-10 20:16:23] 2026-03-10 18:52:17,595 | INFO     | sum of square deviations: 1869302025.5
[2026-03-10 20:16:23] 2026-03-10 18:52:17,597 | INFO     | sum of deviations: 21112652355.0
[2026-03-10 20:16:23] 2026-03-10 18:52:17,597 | INFO     | mean x: 1773163164.5
[2026-03-10 20:16:23] 2026-03-10 18:52:17,597 | INFO     | mean y: 2325355.868131868
[2026-03-10 20:16:23] 2026-03-10 18:52:17,597 | INFO     | intersect: -20024495858.732952
[2026-03-10 20:16:23] 2026-03-10 18:52:17,597 | INFO     | chi2: 1.3542428208711426
[2026-03-10 20:16:23] 2026-03-10 18:52:17,598 | INFO     | sum of square deviations: 1719429448.0
[2026-03-10 20:16:23] 2026-03-10 18:52:17,599 | INFO     | sum of deviations: 20395081722.000008
[2026-03-10 20:16:23] 2026-03-10 18:52:17,599 | INFO     | mean x: 1773163012.0
[2026-03-10 20:16:23] 2026-03-10 18:52:17,599 | INFO     | mean y: 2324625.5084745763
[2026-03-10 20:16:23] 2026-03-10 18:52:17,599 | INFO     | intersect: -21030119932.32585
[2026-03-10 20:16:23] 2026-03-10 18:52:17,599 | INFO     | chi2: 1.355255893298832
[2026-03-10 20:16:23] 2026-03-10 18:52:17,599 | INFO     | current chi2=1.355255893298832 (change=-0.07480729541823629 %)
[2026-03-10 20:16:23] 2026-03-10 18:52:17,600 | INFO     | right removable region: 176
[2026-03-10 20:16:23] 2026-03-10 18:52:17,600 | INFO     | sum of square deviations: 1719429448.0
[2026-03-10 20:16:23] 2026-03-10 18:52:17,601 | INFO     | sum of deviations: -2498997370.0
[2026-03-10 20:16:23] 2026-03-10 18:52:17,601 | INFO     | mean x: 1773163317.0
[2026-03-10 20:16:23] 2026-03-10 18:52:17,601 | INFO     | mean y: 2349046.903954802
[2026-03-10 20:16:23] 2026-03-10 18:52:17,601 | INFO     | intersect: 2579442553.6585727
[2026-03-10 20:16:23] 2026-03-10 18:52:17,602 | INFO     | chi2: 0.010070251793387176
[2026-03-10 20:16:23] 2026-03-10 18:52:17,602 | INFO     | current chi2=0.010070251793387176 (change=99.25639245501708 %)
[2026-03-10 20:16:23] 2026-03-10 18:52:17,602 | INFO     | sum of square deviations: 1577789583.0
[2026-03-10 20:16:23] 2026-03-10 18:52:17,603 | INFO     | sum of deviations: -1569063960.0000005
[2026-03-10 20:16:23] 2026-03-10 18:52:17,603 | INFO     | mean x: 1773163469.5
[2026-03-10 20:16:23] 2026-03-10 18:52:17,603 | INFO     | mean y: 2348040.7093023257
[2026-03-10 20:16:23] 2026-03-10 18:52:17,603 | INFO     | intersect: 1765705414.3148108
[2026-03-10 20:16:23] 2026-03-10 18:52:17,604 | INFO     | chi2: 0.009257385848480203
[2026-03-10 20:16:23] 2026-03-10 18:52:17,604 | INFO     | current chi2=0.009257385848480203 (change=8.071952534898456 %)
[2026-03-10 20:16:23] 2026-03-10 18:52:17,604 | INFO     | left removable region: 20
[2026-03-10 20:16:23] 2026-03-10 18:52:17,604 | INFO     | sum of square deviations: 1177156955.0
[2026-03-10 20:16:23] 2026-03-10 18:52:17,605 | INFO     | sum of deviations: 1427402501.0
[2026-03-10 20:16:23] 2026-03-10 18:52:17,605 | INFO     | mean x: 1773163591.5
[2026-03-10 20:16:23] 2026-03-10 18:52:17,605 | INFO     | mean y: 2344077.8333333335
[2026-03-10 20:16:23] 2026-03-10 18:52:17,605 | INFO     | intersect: -2147766945.5426803
[2026-03-10 20:16:23] 2026-03-10 18:52:17,606 | INFO     | chi2: 7.688050756423738e-05
[2026-03-10 20:16:23] 2026-03-10 18:52:17,606 | INFO     | current memory leak: 1.21 B/s (using 156 data points, chi2=0.00)
[2026-03-10 20:16:23] 2026-03-10 18:52:17,606 | INFO     | could have reported an average CPU frequency of 2682 MHz (10 samples)
[2026-03-10 20:16:23] 2026-03-10 18:52:17,606 | INFO     | ..............................
[2026-03-10 20:16:23] 2026-03-10 18:52:17,606 | INFO     | . Timing measurements:
[2026-03-10 20:16:23] 2026-03-10 18:52:17,606 | INFO     | . get job = 0 s
[2026-03-10 20:16:23] 2026-03-10 18:52:17,607 | INFO     | . initial setup = 9 s
[2026-03-10 20:16:23] 2026-03-10 18:52:17,607 | INFO     | . payload setup = 10 s
[2026-03-10 20:16:23] 2026-03-10 18:52:17,607 | INFO     | . stage-in = 0 s
[2026-03-10 20:16:23] 2026-03-10 18:52:17,607 | INFO     | . payload execution = 11092 s
[2026-03-10 20:16:23] 2026-03-10 18:52:17,607 | INFO     | . stage-out = 1 s
[2026-03-10 20:16:23] 2026-03-10 18:52:17,607 | INFO     | . log creation = 0 s
[2026-03-10 20:16:23] 2026-03-10 18:52:17,607 | INFO     | ..............................
[2026-03-10 20:16:23] 2026-03-10 18:52:17,836 | INFO     | 
[2026-03-10 20:16:23] 2026-03-10 18:52:17,837 | INFO     | job summary report
[2026-03-10 20:16:23] 2026-03-10 18:52:17,837 | INFO     | --------------------------------------------------
[2026-03-10 20:16:23] 2026-03-10 18:52:17,837 | INFO     | PanDA job id: 7042734082
[2026-03-10 20:16:23] 2026-03-10 18:52:17,837 | INFO     | task id: 48958635
[2026-03-10 20:16:23] 2026-03-10 18:52:17,837 | INFO     | errors: (none)
[2026-03-10 20:16:23] 2026-03-10 18:52:17,837 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 20:16:23] 2026-03-10 18:52:17,837 | INFO     | pilot state: finished 
[2026-03-10 20:16:23] 2026-03-10 18:52:17,837 | INFO     | transexitcode: 0
[2026-03-10 20:16:23] 2026-03-10 18:52:17,837 | INFO     | exeerrorcode: 0
[2026-03-10 20:16:23] 2026-03-10 18:52:17,837 | INFO     | exeerrordiag: 
[2026-03-10 20:16:23] 2026-03-10 18:52:17,837 | INFO     | exitcode: 0
[2026-03-10 20:16:23] 2026-03-10 18:52:17,838 | INFO     | exitmsg: OK
[2026-03-10 20:16:23] 2026-03-10 18:52:17,838 | INFO     | cpuconsumptiontime: 41797 s
[2026-03-10 20:16:23] 2026-03-10 18:52:17,838 | INFO     | nevents: 400
[2026-03-10 20:16:23] 2026-03-10 18:52:17,838 | INFO     | neventsw: 0
[2026-03-10 20:16:23] 2026-03-10 18:52:17,838 | INFO     | pid: 1515240
[2026-03-10 20:16:23] 2026-03-10 18:52:17,838 | INFO     | pgrp: 1515240
[2026-03-10 20:16:23] 2026-03-10 18:52:17,838 | INFO     | corecount: 4
[2026-03-10 20:16:23] 2026-03-10 18:52:17,838 | INFO     | event service: False
[2026-03-10 20:16:23] 2026-03-10 18:52:17,838 | INFO     | sizes: {0: 2279706, 1: 2280223, 12: 2280223, 11106: 2309719, 11107: 2318741, 11110: 2318797, 11113: 2319119}
[2026-03-10 20:16:23] 2026-03-10 18:52:17,838 | INFO     | --------------------------------------------------
[2026-03-10 20:16:23] 2026-03-10 18:52:17,838 | INFO     | 
[2026-03-10 20:16:23] 2026-03-10 18:52:17,839 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot108/slots/0
[2026-03-10 20:16:23] 2026-03-10 18:52:17,875 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 20:16:23] 2026-03-10 18:52:17,876 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 20:16:23] 2026-03-10 18:52:17,876 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 20:16:23] 2026-03-10 18:52:17,876 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 20:16:23] 2026-03-10 18:52:17,876 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 20:16:23] 2026-03-10 18:52:17,876 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 20:16:23] 2026-03-10 18:52:17,876 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 20:16:23] 2026-03-10 18:52:17,876 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 20:16:23] 2026-03-10 18:52:17,876 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 20:16:23] 2026-03-10 18:52:17,877 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 20:16:23] 2026-03-10 18:52:17,877 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 20:16:23] 2026-03-10 18:52:17,877 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 20:16:23] 2026-03-10 18:52:17,877 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 20:16:23] 2026-03-10 18:52:17,877 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 20:16:23] 2026-03-10 18:52:17,877 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 20:16:23] 2026-03-10 18:52:17,877 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 20:16:23] 2026-03-10 18:52:17,877 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 20:16:23] 2026-03-10 18:52:17,877 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 20:16:23] 2026-03-10 18:52:17,877 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 20:16:23] 2026-03-10 18:52:17,877 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 20:16:23] 2026-03-10 18:52:17,878 | INFO     | job 7042734082 has completed (purged errors)
[2026-03-10 20:16:23] 2026-03-10 18:52:17,878 | INFO     | overall cleanup function is called
[2026-03-10 20:16:23] 2026-03-10 18:52:18,887 | INFO     | --- collectZombieJob: --- 10, [1515240]
[2026-03-10 20:16:23] 2026-03-10 18:52:18,888 | INFO     | zombie collector waiting for pid 1515240
[2026-03-10 20:16:23] 2026-03-10 18:52:18,888 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 20:16:23] 2026-03-10 18:52:18,888 | INFO     | collected zombie processes
[2026-03-10 20:16:23] 2026-03-10 18:52:18,888 | INFO     | will attempt to kill all subprocesses of pid=1515240
[2026-03-10 20:16:23] 2026-03-10 18:52:19,849 | INFO     | process IDs to be killed: [1515240] (in reverse order)
[2026-03-10 20:16:23] 2026-03-10 18:52:20,202 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 20:16:23] 2026-03-10 18:52:20,202 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 20:16:23] 2026-03-10 18:52:20,234 | INFO     | did not find any defunct processes belonging to 1515240
[2026-03-10 20:16:23] 2026-03-10 18:52:20,265 | INFO     | did not find any defunct processes belonging to 1515240
[2026-03-10 20:16:23] 2026-03-10 18:52:20,265 | INFO     | ready for new job
[2026-03-10 20:16:23] 2026-03-10 18:52:20,266 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 20:16:23] 2026-03-10 18:52:20,269 | INFO     | **************************************
[2026-03-10 20:16:23] 2026-03-10 18:52:20,269 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 20:16:23] 2026-03-10 18:52:20,269 | INFO     | **************************************
[2026-03-10 20:16:23] 2026-03-10 18:52:20,269 | INFO     | 
[2026-03-10 20:16:23] 2026-03-10 18:52:20,278 | INFO     | architecture information:
[2026-03-10 20:16:23] 2026-03-10 18:52:20,278 | INFO     | executing command: cat /etc/os-release
[2026-03-10 20:16:23] 2026-03-10 18:52:20,320 | INFO     | cat /etc/os-release:
[2026-03-10 20:16:23] NAME="CentOS Linux"
[2026-03-10 20:16:23] VERSION="7 (Core)"
[2026-03-10 20:16:23] ID="centos"
[2026-03-10 20:16:23] ID_LIKE="rhel fedora"
[2026-03-10 20:16:23] VERSION_ID="7"
[2026-03-10 20:16:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 20:16:23] ANSI_COLOR="0;31"
[2026-03-10 20:16:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 20:16:23] HOME_URL="https://www.centos.org/"
[2026-03-10 20:16:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 20:16:23] 
[2026-03-10 20:16:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 20:16:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 20:16:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 20:16:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 20:16:23] 
[2026-03-10 20:16:23] 2026-03-10 18:52:20,321 | INFO     | **************************************
[2026-03-10 20:16:23] 2026-03-10 18:52:20,824 | INFO     | executing command: df -mP /var/lib/boinc/var/slot108/slots/0
[2026-03-10 20:16:23] 2026-03-10 18:52:20,855 | INFO     | sufficient remaining disk space (45129662464 B)
[2026-03-10 20:16:23] 2026-03-10 18:52:20,856 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 20:16:23] 2026-03-10 18:52:20,856 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 20:16:23] 2026-03-10 18:52:20,856 | INFO     | update_server=False
[2026-03-10 20:16:23] 2026-03-10 18:52:20,856 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 20:16:23] 2026-03-10 18:52:20,857 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 20:16:23] 2026-03-10 18:52:21,276 | INFO     | all data control threads have been joined
[2026-03-10 20:16:23] 2026-03-10 18:52:21,406 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 20:16:23] 2026-03-10 18:52:21,577 | INFO     | all payload control threads have been joined
[2026-03-10 20:16:23] 2026-03-10 18:52:21,717 | INFO     | all job control threads have been joined
[2026-03-10 20:16:23] 2026-03-10 18:52:21,729 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 20:16:23] 2026-03-10 18:52:21,730 | INFO     | aborting loop
[2026-03-10 20:16:23] 2026-03-10 18:52:21,861 | INFO     | [job] retrieve thread has finished
[2026-03-10 20:16:23] 2026-03-10 18:52:22,025 | INFO     | [payload] failed_post thread has finished
[2026-03-10 20:16:23] 2026-03-10 18:52:22,270 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 20:16:23] 2026-03-10 18:52:22,281 | INFO     | [data] control thread has finished
[2026-03-10 20:16:23] 2026-03-10 18:52:22,392 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 20:16:23] 2026-03-10 18:52:22,499 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 20:16:23] 2026-03-10 18:52:22,582 | INFO     | [payload] control thread has finished
[2026-03-10 20:16:23] 2026-03-10 18:52:22,712 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 20:16:23] 2026-03-10 18:52:22,722 | INFO     | [job] control thread has finished
[2026-03-10 20:16:23] 2026-03-10 18:52:22,734 | INFO     | [job] job monitor thread has finished
[2026-03-10 20:16:23] 2026-03-10 18:52:22,802 | INFO     | [data] copytool_in thread has finished
[2026-03-10 20:16:23] 2026-03-10 18:52:22,861 | INFO     | [data] copytool_out thread has finished
[2026-03-10 20:16:23] 2026-03-10 18:52:22,913 | INFO     | [job] validate thread has finished
[2026-03-10 20:16:23] 2026-03-10 18:52:23,342 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 20:16:23] 2026-03-10 18:52:23,438 | INFO     | [payload] validate_post thread has finished
[2026-03-10 20:16:23] 2026-03-10 18:52:23,717 | INFO     | [job] queue monitor thread has finished
[2026-03-10 20:16:23] 2026-03-10 18:52:25,412 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 20:16:23] 2026-03-10 18:52:51,501 | INFO     | PID=1500068 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 20:16:23] 2026-03-10 18:52:51,501 | INFO     | .. there are 23 such processes running
[2026-03-10 20:16:23] 2026-03-10 18:52:51,502 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 20:16:23] 2026-03-10 18:52:51,502 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 20:16:23] 2026-03-10 18:52:51,502 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 20:16:23] 2026-03-10 18:53:11,361 | INFO     | [monitor] cgroup control has ended
[2026-03-10 20:16:23] 2026-03-10 18:53:12,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22456947812160)>', '<ExcThread(monitor, started 22456630753024)>']
[2026-03-10 20:16:23] 2026-03-10 18:53:12,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 20:16:23] 2026-03-10 18:53:12,610 | INFO     | [monitor] control thread has ended
[2026-03-10 20:16:23] 2026-03-10 18:53:17,271 | INFO     | all workflow threads have been joined
[2026-03-10 20:16:23] 2026-03-10 18:53:17,272 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 20:16:23] 2026-03-10 18:53:17,272 | INFO     | traces error code: 0
[2026-03-10 20:16:23] 2026-03-10 18:53:17,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 20:16:23] 2026-03-10 18:53:17,465 [wrapper] ==== pilot stdout END ====
[2026-03-10 20:16:23] 2026-03-10 18:53:17,469 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 20:16:23] 2026-03-10 18:53:17,473 [wrapper] pilotpid: 1500068
[2026-03-10 20:16:23] 2026-03-10 18:53:17,476 [wrapper] Pilot exit status: 0
[2026-03-10 20:16:23] 2026-03-10 18:53:17,492 [wrapper] pandaids: 7042734082
[2026-03-10 20:16:23] 2026-03-10 18:53:17,699 [wrapper] cleanup supervisor_pilot 1915887 1500069
[2026-03-10 20:16:23] 2026-03-10 18:53:17,703 [wrapper] Test setup, not cleaning
[2026-03-10 20:16:23] 2026-03-10 18:53:17,707 [wrapper] apfmon messages muted
[2026-03-10 20:16:23] 2026-03-10 18:53:17,711 [wrapper] ==== wrapper stdout END ====
[2026-03-10 20:16:23] 2026-03-10 18:53:17,714 [wrapper] ==== wrapper stderr END ====
[2026-03-10 20:16:23]  *** Error codes and diagnostics ***
[2026-03-10 20:16:23]     "exeErrorCode": 0,
[2026-03-10 20:16:23]     "exeErrorDiag": "",
[2026-03-10 20:16:23]     "pilotErrorCode": 0,
[2026-03-10 20:16:23]     "pilotErrorDiag": "",
[2026-03-10 20:16:23]  *** Listing of results directory ***
[2026-03-10 20:16:23] total 450544
[2026-03-10 20:16:23] -rw-r--r--. 1 boinc boinc    584627 Mar  6 02:49 pilot3.tar.gz
[2026-03-10 20:16:23] -rwx------. 1 boinc boinc     36322 Mar  6 02:52 runpilot2-wrapper.sh
[2026-03-10 20:16:23] -rw-r--r--. 1 boinc boinc      5111 Mar  6 02:53 queuedata.json
[2026-03-10 20:16:23] -rw-r--r--. 1 boinc boinc       100 Mar 10 16:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 20:16:23] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 16:46 run_atlas
[2026-03-10 20:16:23] -rw-r--r--. 1 boinc boinc       105 Mar 10 16:46 job.xml
[2026-03-10 20:16:23] -rw-r--r--. 2 boinc boinc 268260678 Mar 10 16:46 EVNT.48958633._000016.pool.root.1
[2026-03-10 20:16:23] -rw-r--r--. 1 boinc boinc      6621 Mar 10 16:46 init_data.xml
[2026-03-10 20:16:23] drwxrwx--x. 2 boinc boinc      4096 Mar 10 16:46 shared
[2026-03-10 20:16:23] -rw-r--r--. 2 boinc boinc    597929 Mar 10 16:46 input.tar.gz
[2026-03-10 20:16:23] -rw-r--r--. 2 boinc boinc     15845 Mar 10 16:46 start_atlas.sh
[2026-03-10 20:16:23] -rw-r--r--. 1 boinc boinc         0 Mar 10 16:46 boinc_lockfile
[2026-03-10 20:16:23] -rw-r--r--. 1 boinc boinc      2525 Mar 10 16:46 pandaJob.out
[2026-03-10 20:16:23] -rw-------. 1 boinc boinc   1004455 Mar 10 16:46 agis_schedconf.cvmfs.json
[2026-03-10 20:16:23] -rw-------. 1 boinc boinc       444 Mar 10 16:46 workernode_map.json
[2026-03-10 20:16:23] drwx------. 5 boinc boinc      4096 Mar 10 16:46 pilot3
[2026-03-10 20:16:23] -rw-------. 1 boinc boinc 185362262 Mar 10 19:51 HITS.48958635._000297.pool.root.1
[2026-03-10 20:16:23] -rw-r--r--. 1 boinc boinc       528 Mar 10 19:51 boinc_task_state.xml
[2026-03-10 20:16:23] -rw-------. 1 boinc boinc        95 Mar 10 19:51 pilot_heartbeat.json
[2026-03-10 20:16:23] -rw-------. 1 boinc boinc      1027 Mar 10 19:52 memory_monitor_summary.json
[2026-03-10 20:16:23] -rw-------. 1 boinc boinc   1511578 Mar 10 19:52 agis_ddmendpoints.agis.ALL.json
[2026-03-10 20:16:23] -rw-------. 1 boinc boinc    367500 Mar 10 19:52 log.48958635._000297.job.log.tgz.1
[2026-03-10 20:16:23] -rw-------. 1 boinc boinc      6352 Mar 10 19:52 heartbeat.json
[2026-03-10 20:16:23] -rw-------. 1 boinc boinc      4830 Mar 10 19:53 pilotlog.txt
[2026-03-10 20:16:23] -rw-------. 1 boinc boinc   1527981 Mar 10 19:53 log.48958635._000297.job.log.1
[2026-03-10 20:16:23] -rw-------. 1 boinc boinc       357 Mar 10 19:53 output.list
[2026-03-10 20:16:23] -rw-r--r--. 1 boinc boinc       620 Mar 10 19:53 runtime_log
[2026-03-10 20:16:23] -rw-------. 1 boinc boinc   1914880 Mar 10 19:53 result.tar.gz
[2026-03-10 20:16:23] -rw-r--r--. 1 boinc boinc      9222 Mar 10 19:53 runtime_log.err
[2026-03-10 20:16:23] -rw-------. 1 boinc boinc       666 Mar 10 19:53 oKvKDmzXZI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmJrPLDmLasDtn.diag
[2026-03-10 20:16:23] -rw-r--r--. 1 boinc boinc        26 Mar 10 20:16 wrapper_checkpoint.txt
[2026-03-10 20:16:23] -rw-r--r--. 1 boinc boinc      8192 Mar 10 20:16 boinc_mmap_file
[2026-03-10 20:16:23] -rw-r--r--. 1 boinc boinc     20898 Mar 10 20:16 stderr.txt
[2026-03-10 20:16:23] HITS file was successfully produced:
[2026-03-10 20:16:23] -rw-------. 1 boinc boinc 185362262 Mar 10 19:51 shared/HITS.pool.root.1
[2026-03-10 20:16:23]  *** Contents of shared directory: ***
[2026-03-10 20:16:23] total 445476
[2026-03-10 20:16:23] -rw-r--r--. 2 boinc boinc 268260678 Mar 10 16:46 ATLAS.root_0
[2026-03-10 20:16:23] -rw-r--r--. 2 boinc boinc    597929 Mar 10 16:46 input.tar.gz
[2026-03-10 20:16:23] -rw-r--r--. 2 boinc boinc     15845 Mar 10 16:46 start_atlas.sh
[2026-03-10 20:16:23] -rw-------. 1 boinc boinc 185362262 Mar 10 19:51 HITS.pool.root.1
[2026-03-10 20:16:23] -rw-------. 1 boinc boinc   1914880 Mar 10 19:53 result.tar.gz
20:16:25 (1487674): run_atlas exited; CPU time 42565.412124
20:16:25 (1487674): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN