Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:11:21 (2970492): wrapper (7.7.26015): starting
11:11:21 (2970492): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 11:11:21] Arguments: --nthreads 4
[2026-03-07 11:11:21] Threads: 4
[2026-03-07 11:11:21] Checking for CVMFS
[2026-03-07 11:11:21] No cvmfs_config command found, will try listing directly
[2026-03-07 11:11:21] CVMFS is ok
[2026-03-07 11:11:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 11:11:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 11:11:21] Further information can be found at the LHC@home message board.
[2026-03-07 11:11:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 11:11:21] Checking for apptainer binary...
[2026-03-07 11:11:21] which: no apptainer in ((null))
[2026-03-07 11:11:21] apptainer is not installed, using version from CVMFS
[2026-03-07 11:11:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 11:11:21] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot212/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-07 11:11:21] apptainer works
[2026-03-07 11:11:21] Set ATHENA_PROC_NUMBER=4
[2026-03-07 11:11:21] Set ATHENA_CORE_NUMBER=4
[2026-03-07 11:11:21] Starting ATLAS job with PandaID=7043051297
[2026-03-07 11:11:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot212/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 12:52:50]  *** The last 200 lines of the pilot log: ***
[2026-03-07 12:52:50]  guid=06dee33a-45bf-4742-a91b-9c24bbfefcb0
[2026-03-07 12:52:50]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-07 12:52:50]  is_altstaged=None
[2026-03-07 12:52:50]  is_tar=False
[2026-03-07 12:52:50]  lfn=log.48966988._004986.job.log.tgz.1
[2026-03-07 12:52:50]  mtime=0
[2026-03-07 12:52:50]  protocol_id=None
[2026-03-07 12:52:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 12:52:50]  replicas=None
[2026-03-07 12:52:50]  scope=mc23_13p6TeV
[2026-03-07 12:52:50]  status=None
[2026-03-07 12:52:50]  status_code=0
[2026-03-07 12:52:50]  storage_token=
[2026-03-07 12:52:50]  surl=/var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7043051297/log.48966988._004986.job.log.tgz.1
[2026-03-07 12:52:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/8d/log.48966988._004986.job.log.tgz.1
[2026-03-07 12:52:50]  workdir=None
[2026-03-07 12:52:50] ]
[2026-03-07 12:52:50] 2026-03-07 11:51:52,115 | INFO     | transferring file log.48966988._004986.job.log.tgz.1 from /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7043051297/log.48966988._004986.job.log.tgz.1 to /var/lib/
[2026-03-07 12:52:50] 2026-03-07 11:51:52,116 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7043051297/log.48966988._004986.job.log.tgz.1 /var/lib/boinc/var/slot212/slots/0/
[2026-03-07 12:52:50] 2026-03-07 11:51:52,132 | INFO     | adding to output.list: log.48966988._004986.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/8d/log.48966988._004986.job.log.tg
[2026-03-07 12:52:50] 2026-03-07 11:51:52,135 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 12:52:50] 2026-03-07 11:51:52,135 | INFO     | summary of transferred files:
[2026-03-07 12:52:50] 2026-03-07 11:51:52,136 | INFO     |  -- lfn=log.48966988._004986.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 12:52:50] 2026-03-07 11:51:52,136 | INFO     | stage-out finished correctly
[2026-03-07 12:52:50] 2026-03-07 11:51:52,584 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 12:52:50] 2026-03-07 11:51:53,257 | INFO     | job 7043051297 has state=finished
[2026-03-07 12:52:50] 2026-03-07 11:51:53,258 | INFO     | preparing for final server update for job 7043051297 in state='finished'
[2026-03-07 12:52:50] 2026-03-07 11:51:53,258 | INFO     | reading metadata from: /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7043051297/jobReport.json
[2026-03-07 12:52:50] 2026-03-07 11:51:53,259 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot212/slots/0/workernode_map.json
[2026-03-07 12:52:50] 2026-03-07 11:51:53,259 | INFO     | this job has now completed (state=finished)
[2026-03-07 12:52:50] 2026-03-07 11:51:53,259 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 12:52:50] 2026-03-07 11:51:53,260 | INFO     | log transfer has been attempted: DONE
[2026-03-07 12:52:50] 2026-03-07 11:51:53,260 | INFO     | job 7043051297 has finished - writing final server update
[2026-03-07 12:52:50] 2026-03-07 11:51:53,260 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_391369/.job.ad'
[2026-03-07 12:52:50] 2026-03-07 11:51:53,260 | INFO     | total number of processed events: 400 (read)
[2026-03-07 12:52:50] 2026-03-07 11:51:53,278 | INFO     | using path: /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7043051297/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 12:52:50] 2026-03-07 11:51:53,278 | INFO     | extracted standard info from prmon json
[2026-03-07 12:52:50] 2026-03-07 11:51:53,278 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 12:52:50] 2026-03-07 11:51:53,278 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 12:52:50] 2026-03-07 11:51:53,278 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 12:52:50] 2026-03-07 11:51:53,278 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 12:52:50] 2026-03-07 11:51:53,280 | INFO     | fitting pss+swap vs Time
[2026-03-07 12:52:50] 2026-03-07 11:51:53,280 | INFO     | sum of square deviations: 241429643.0
[2026-03-07 12:52:50] 2026-03-07 11:51:53,280 | INFO     | sum of deviations: 1275202316.0000002
[2026-03-07 12:52:50] 2026-03-07 11:51:53,280 | INFO     | mean x: 1772881395.5
[2026-03-07 12:52:50] 2026-03-07 11:51:53,280 | INFO     | mean y: 2327634.065217391
[2026-03-07 12:52:50] 2026-03-07 11:51:53,280 | INFO     | intersect: -9361818514.0319
[2026-03-07 12:52:50] 2026-03-07 11:51:53,280 | INFO     | chi2: 0.000492212819551563
[2026-03-07 12:52:50] 2026-03-07 11:51:53,280 | INFO     | current memory leak: 5.28 B/s (using 92 data points, chi2=0.00)
[2026-03-07 12:52:50] 2026-03-07 11:51:53,280 | INFO     | could have reported an average CPU frequency of 3601 MHz (7 samples)
[2026-03-07 12:52:50] 2026-03-07 11:51:53,281 | INFO     | ..............................
[2026-03-07 12:52:50] 2026-03-07 11:51:53,281 | INFO     | . Timing measurements:
[2026-03-07 12:52:50] 2026-03-07 11:51:53,281 | INFO     | . get job = 0 s
[2026-03-07 12:52:50] 2026-03-07 11:51:53,281 | INFO     | . initial setup = 4 s
[2026-03-07 12:52:50] 2026-03-07 11:51:53,281 | INFO     | . payload setup = 4 s
[2026-03-07 12:52:50] 2026-03-07 11:51:53,281 | INFO     | . stage-in = 0 s
[2026-03-07 12:52:50] 2026-03-07 11:51:53,281 | INFO     | . payload execution = 5997 s
[2026-03-07 12:52:50] 2026-03-07 11:51:53,281 | INFO     | . stage-out = 0 s
[2026-03-07 12:52:50] 2026-03-07 11:51:53,281 | INFO     | . log creation = 0 s
[2026-03-07 12:52:50] 2026-03-07 11:51:53,281 | INFO     | ..............................
[2026-03-07 12:52:50] 2026-03-07 11:51:53,329 | INFO     | 
[2026-03-07 12:52:50] 2026-03-07 11:51:53,329 | INFO     | job summary report
[2026-03-07 12:52:50] 2026-03-07 11:51:53,329 | INFO     | --------------------------------------------------
[2026-03-07 12:52:50] 2026-03-07 11:51:53,329 | INFO     | PanDA job id: 7043051297
[2026-03-07 12:52:50] 2026-03-07 11:51:53,329 | INFO     | task id: 48966988
[2026-03-07 12:52:50] 2026-03-07 11:51:53,329 | INFO     | errors: (none)
[2026-03-07 12:52:50] 2026-03-07 11:51:53,330 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 12:52:50] 2026-03-07 11:51:53,330 | INFO     | pilot state: finished 
[2026-03-07 12:52:50] 2026-03-07 11:51:53,330 | INFO     | transexitcode: 0
[2026-03-07 12:52:50] 2026-03-07 11:51:53,330 | INFO     | exeerrorcode: 0
[2026-03-07 12:52:50] 2026-03-07 11:51:53,330 | INFO     | exeerrordiag: 
[2026-03-07 12:52:50] 2026-03-07 11:51:53,330 | INFO     | exitcode: 0
[2026-03-07 12:52:50] 2026-03-07 11:51:53,333 | INFO     | exitmsg: OK
[2026-03-07 12:52:50] 2026-03-07 11:51:53,333 | INFO     | cpuconsumptiontime: 23091 s
[2026-03-07 12:52:50] 2026-03-07 11:51:53,333 | INFO     | nevents: 400
[2026-03-07 12:52:50] 2026-03-07 11:51:53,333 | INFO     | neventsw: 0
[2026-03-07 12:52:50] 2026-03-07 11:51:53,333 | INFO     | pid: 2981188
[2026-03-07 12:52:50] 2026-03-07 11:51:53,333 | INFO     | pgrp: 2981188
[2026-03-07 12:52:50] 2026-03-07 11:51:53,333 | INFO     | corecount: 4
[2026-03-07 12:52:50] 2026-03-07 11:51:53,333 | INFO     | event service: False
[2026-03-07 12:52:50] 2026-03-07 11:51:53,333 | INFO     | sizes: {0: 2295421, 1: 2295882, 11: 2295882, 6006: 2322648, 6007: 2331726, 6008: 2331864}
[2026-03-07 12:52:50] 2026-03-07 11:51:53,333 | INFO     | --------------------------------------------------
[2026-03-07 12:52:50] 2026-03-07 11:51:53,333 | INFO     | 
[2026-03-07 12:52:50] 2026-03-07 11:51:53,333 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot212/slots/0
[2026-03-07 12:52:50] 2026-03-07 11:51:53,357 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 12:52:50] 2026-03-07 11:51:53,357 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 12:52:50] 2026-03-07 11:51:53,357 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 12:52:50] 2026-03-07 11:51:53,357 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 12:52:50] 2026-03-07 11:51:53,357 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 12:52:50] 2026-03-07 11:51:53,357 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 12:52:50] 2026-03-07 11:51:53,357 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 12:52:50] 2026-03-07 11:51:53,358 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 12:52:50] 2026-03-07 11:51:53,358 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 12:52:50] 2026-03-07 11:51:53,358 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 12:52:50] 2026-03-07 11:51:53,358 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 12:52:50] 2026-03-07 11:51:53,358 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 12:52:50] 2026-03-07 11:51:53,358 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 12:52:50] 2026-03-07 11:51:53,358 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 12:52:50] 2026-03-07 11:51:53,358 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 12:52:50] 2026-03-07 11:51:53,358 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 12:52:50] 2026-03-07 11:51:53,358 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 12:52:50] 2026-03-07 11:51:53,358 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 12:52:50] 2026-03-07 11:51:53,358 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 12:52:50] 2026-03-07 11:51:53,358 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 12:52:50] 2026-03-07 11:51:53,358 | INFO     | job 7043051297 has completed (purged errors)
[2026-03-07 12:52:50] 2026-03-07 11:51:53,358 | INFO     | overall cleanup function is called
[2026-03-07 12:52:50] 2026-03-07 11:51:54,365 | INFO     | --- collectZombieJob: --- 10, [2981188]
[2026-03-07 12:52:50] 2026-03-07 11:51:54,365 | INFO     | zombie collector waiting for pid 2981188
[2026-03-07 12:52:50] 2026-03-07 11:51:54,365 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 12:52:50] 2026-03-07 11:51:54,365 | INFO     | collected zombie processes
[2026-03-07 12:52:50] 2026-03-07 11:51:54,365 | INFO     | will attempt to kill all subprocesses of pid=2981188
[2026-03-07 12:52:50] 2026-03-07 11:51:54,822 | INFO     | process IDs to be killed: [2981188] (in reverse order)
[2026-03-07 12:52:50] 2026-03-07 11:51:55,042 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 12:52:50] 2026-03-07 11:51:55,043 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 12:52:50] 2026-03-07 11:51:55,072 | INFO     | did not find any defunct processes belonging to 2981188
[2026-03-07 12:52:50] 2026-03-07 11:51:55,098 | INFO     | did not find any defunct processes belonging to 2981188
[2026-03-07 12:52:50] 2026-03-07 11:51:55,099 | INFO     | ready for new job
[2026-03-07 12:52:50] 2026-03-07 11:51:55,099 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 12:52:50] 2026-03-07 11:51:55,100 | INFO     | **************************************
[2026-03-07 12:52:50] 2026-03-07 11:51:55,100 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 12:52:50] 2026-03-07 11:51:55,100 | INFO     | **************************************
[2026-03-07 12:52:50] 2026-03-07 11:51:55,100 | INFO     | 
[2026-03-07 12:52:50] 2026-03-07 11:51:55,106 | INFO     | architecture information:
[2026-03-07 12:52:50] 2026-03-07 11:51:55,107 | INFO     | executing command: cat /etc/os-release
[2026-03-07 12:52:50] 2026-03-07 11:51:55,123 | INFO     | cat /etc/os-release:
[2026-03-07 12:52:50] NAME="CentOS Linux"
[2026-03-07 12:52:50] VERSION="7 (Core)"
[2026-03-07 12:52:50] ID="centos"
[2026-03-07 12:52:50] ID_LIKE="rhel fedora"
[2026-03-07 12:52:50] VERSION_ID="7"
[2026-03-07 12:52:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 12:52:50] ANSI_COLOR="0;31"
[2026-03-07 12:52:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 12:52:50] HOME_URL="https://www.centos.org/"
[2026-03-07 12:52:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 12:52:50] 
[2026-03-07 12:52:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 12:52:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 12:52:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 12:52:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 12:52:50] 
[2026-03-07 12:52:50] 2026-03-07 11:51:55,123 | INFO     | **************************************
[2026-03-07 12:52:50] 2026-03-07 11:51:55,625 | INFO     | executing command: df -mP /var/lib/boinc/var/slot212/slots/0
[2026-03-07 12:52:50] 2026-03-07 11:51:55,639 | INFO     | sufficient remaining disk space (21473787904 B)
[2026-03-07 12:52:50] 2026-03-07 11:51:55,639 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 12:52:50] 2026-03-07 11:51:55,639 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 12:52:50] 2026-03-07 11:51:55,639 | INFO     | update_server=False
[2026-03-07 12:52:50] 2026-03-07 11:51:55,639 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 12:52:50] 2026-03-07 11:51:55,640 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 12:52:50] 2026-03-07 11:51:56,133 | INFO     | all data control threads have been joined
[2026-03-07 12:52:50] 2026-03-07 11:51:56,433 | INFO     | all job control threads have been joined
[2026-03-07 12:52:50] 2026-03-07 11:51:56,645 | INFO     | [job] retrieve thread has finished
[2026-03-07 12:52:50] 2026-03-07 11:51:56,673 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 12:52:50] 2026-03-07 11:51:57,007 | INFO     | [data] copytool_in thread has finished
[2026-03-07 12:52:50] 2026-03-07 11:51:57,016 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 12:52:50] 2026-03-07 11:51:57,026 | INFO     | all payload control threads have been joined
[2026-03-07 12:52:50] 2026-03-07 11:51:57,042 | INFO     | [payload] validate_post thread has finished
[2026-03-07 12:52:50] 2026-03-07 11:51:57,138 | INFO     | [data] control thread has finished
[2026-03-07 12:52:50] 2026-03-07 11:51:57,306 | WARNING  | process 2981188 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 12:52:50] 2026-03-07 11:51:57,338 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 12:52:50] 2026-03-07 11:51:57,438 | INFO     | [job] control thread has finished
[2026-03-07 12:52:50] 2026-03-07 11:51:57,616 | INFO     | using path: /var/lib/boinc/var/slot212/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 12:52:50] 2026-03-07 11:51:57,645 | INFO     | [data] copytool_out thread has finished
[2026-03-07 12:52:50] 2026-03-07 11:51:57,810 | INFO     | [payload] failed_post thread has finished
[2026-03-07 12:52:50] 2026-03-07 11:51:57,900 | INFO     | [job] validate thread has finished
[2026-03-07 12:52:50] 2026-03-07 11:51:58,015 | INFO     | number of running child processes to parent process 2981188: 1
[2026-03-07 12:52:50] 2026-03-07 11:51:58,015 | INFO     | maximum number of monitored processes: 6
[2026-03-07 12:52:50] 2026-03-07 11:51:58,015 | INFO     | aborting job monitoring since job object (job id=7043051297) has expired
[2026-03-07 12:52:50] 2026-03-07 11:51:58,015 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 12:52:50] 2026-03-07 11:51:58,015 | INFO     | will abort loop
[2026-03-07 12:52:50] 2026-03-07 11:51:58,046 | INFO     | [payload] control thread has finished
[2026-03-07 12:52:50] 2026-03-07 11:51:58,112 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 12:52:50] 2026-03-07 11:51:58,339 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 12:52:50] 2026-03-07 11:51:58,636 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 12:52:50] 2026-03-07 11:51:59,020 | INFO     | [job] job monitor thread has finished
[2026-03-07 12:52:50] 2026-03-07 11:51:59,344 | INFO     | [job] queue monitor thread has finished
[2026-03-07 12:52:50] 2026-03-07 11:52:02,641 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 12:52:50] 2026-03-07 11:52:25,620 | INFO     | PID=2975026 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 12:52:50] 2026-03-07 11:52:25,620 | INFO     | .. there are 52 such processes running
[2026-03-07 12:52:50] 2026-03-07 11:52:25,620 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 12:52:50] 2026-03-07 11:52:25,620 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 12:52:50] 2026-03-07 11:52:25,620 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 12:52:50] 2026-03-07 11:52:43,973 | INFO     | [monitor] cgroup control has ended
[2026-03-07 12:52:50] 2026-03-07 11:52:45,553 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22425428186944)>', '<ExcThread(monitor, started 22425191597824)>']
[2026-03-07 12:52:50] 2026-03-07 11:52:45,717 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 12:52:50] 2026-03-07 11:52:45,717 | INFO     | [monitor] control thread has ended
[2026-03-07 12:52:50] 2026-03-07 11:52:50,578 | INFO     | all workflow threads have been joined
[2026-03-07 12:52:50] 2026-03-07 11:52:50,578 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 12:52:50] 2026-03-07 11:52:50,578 | INFO     | traces error code: 0
[2026-03-07 12:52:50] 2026-03-07 11:52:50,578 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 12:52:50] 2026-03-07 11:52:50,771 [wrapper] ==== pilot stdout END ====
[2026-03-07 12:52:50] 2026-03-07 11:52:50,782 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 12:52:50] 2026-03-07 11:52:50,786 [wrapper] pilotpid: 2975026
[2026-03-07 12:52:50] 2026-03-07 11:52:50,789 [wrapper] Pilot exit status: 0
[2026-03-07 12:52:50] 2026-03-07 11:52:50,799 [wrapper] pandaids: 7043051297
[2026-03-07 12:52:50] 2026-03-07 11:52:50,933 [wrapper] cleanup supervisor_pilot 3880445 2975027
[2026-03-07 12:52:50] 2026-03-07 11:52:50,936 [wrapper] Test setup, not cleaning
[2026-03-07 12:52:50] 2026-03-07 11:52:50,939 [wrapper] apfmon messages muted
[2026-03-07 12:52:50] 2026-03-07 11:52:50,941 [wrapper] ==== wrapper stdout END ====
[2026-03-07 12:52:50] 2026-03-07 11:52:50,944 [wrapper] ==== wrapper stderr END ====
[2026-03-07 12:52:50]  *** Error codes and diagnostics ***
[2026-03-07 12:52:51]     "exeErrorCode": 0,
[2026-03-07 12:52:51]     "exeErrorDiag": "",
[2026-03-07 12:52:51]     "pilotErrorCode": 0,
[2026-03-07 12:52:51]     "pilotErrorDiag": "",
[2026-03-07 12:52:51]  *** Listing of results directory ***
[2026-03-07 12:52:51] total 408996
[2026-03-07 12:52:51] -rw-r--r--. 1 boinc boinc    584627 Mar  6 10:22 pilot3.tar.gz
[2026-03-07 12:52:51] -rwx------. 1 boinc boinc     36322 Mar  6 10:24 runpilot2-wrapper.sh
[2026-03-07 12:52:51] -rw-r--r--. 1 boinc boinc      5111 Mar  6 10:24 queuedata.json
[2026-03-07 12:52:51] -rw-r--r--. 1 boinc boinc       100 Mar  7 11:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 12:52:51] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 11:11 run_atlas
[2026-03-07 12:52:51] -rw-r--r--. 1 boinc boinc       105 Mar  7 11:11 job.xml
[2026-03-07 12:52:51] -rw-r--r--. 2 boinc boinc 214474905 Mar  7 11:11 EVNT.48966985._000300.pool.root.1
[2026-03-07 12:52:51] -rw-r--r--. 2 boinc boinc     15845 Mar  7 11:11 start_atlas.sh
[2026-03-07 12:52:51] drwxrwx--x. 2 boinc boinc      4096 Mar  7 11:11 shared
[2026-03-07 12:52:51] -rw-r--r--. 2 boinc boinc    597965 Mar  7 11:11 input.tar.gz
[2026-03-07 12:52:51] -rw-r--r--. 1 boinc boinc      6708 Mar  7 11:11 init_data.xml
[2026-03-07 12:52:51] -rw-r--r--. 1 boinc boinc         0 Mar  7 11:11 boinc_lockfile
[2026-03-07 12:52:51] -rw-r--r--. 1 boinc boinc      2590 Mar  7 11:11 pandaJob.out
[2026-03-07 12:52:51] -rw-------. 1 boinc boinc    999153 Mar  7 11:11 agis_schedconf.cvmfs.json
[2026-03-07 12:52:51] -rw-------. 1 boinc boinc   1521291 Mar  7 11:11 agis_ddmendpoints.agis.ALL.json
[2026-03-07 12:52:51] -rw-------. 1 boinc boinc       445 Mar  7 11:11 workernode_map.json
[2026-03-07 12:52:51] drwx------. 5 boinc boinc      4096 Mar  7 11:11 pilot3
[2026-03-07 12:52:51] -rw-------. 1 boinc boinc 198092769 Mar  7 12:51 HITS.48966988._004986.pool.root.1
[2026-03-07 12:52:51] -rw-r--r--. 1 boinc boinc       530 Mar  7 12:51 boinc_task_state.xml
[2026-03-07 12:52:51] -rw-------. 1 boinc boinc        95 Mar  7 12:51 pilot_heartbeat.json
[2026-03-07 12:52:51] -rw-------. 1 boinc boinc      1032 Mar  7 12:51 memory_monitor_summary.json
[2026-03-07 12:52:51] -rw-------. 1 boinc boinc    284131 Mar  7 12:51 log.48966988._004986.job.log.tgz.1
[2026-03-07 12:52:51] -rw-------. 1 boinc boinc      6353 Mar  7 12:51 heartbeat.json
[2026-03-07 12:52:51] -rw-r--r--. 1 boinc boinc      8192 Mar  7 12:52 boinc_mmap_file
[2026-03-07 12:52:51] -rw-r--r--. 1 boinc boinc        27 Mar  7 12:52 wrapper_checkpoint.txt
[2026-03-07 12:52:51] -rw-------. 1 boinc boinc      5363 Mar  7 12:52 pilotlog.txt
[2026-03-07 12:52:51] -rw-------. 1 boinc boinc    869695 Mar  7 12:52 log.48966988._004986.job.log.1
[2026-03-07 12:52:51] -rw-------. 1 boinc boinc       357 Mar  7 12:52 output.list
[2026-03-07 12:52:51] -rw-r--r--. 1 boinc boinc       620 Mar  7 12:52 runtime_log
[2026-03-07 12:52:51] -rw-------. 1 boinc boinc   1167360 Mar  7 12:52 result.tar.gz
[2026-03-07 12:52:51] -rw-r--r--. 1 boinc boinc      9221 Mar  7 12:52 runtime_log.err
[2026-03-07 12:52:51] -rw-------. 1 boinc boinc       663 Mar  7 12:52 cTRKDmqagI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm9LRLDmUK7eMo.diag
[2026-03-07 12:52:51] -rw-r--r--. 1 boinc boinc     21284 Mar  7 12:52 stderr.txt
[2026-03-07 12:52:51] HITS file was successfully produced:
[2026-03-07 12:52:51] -rw-------. 1 boinc boinc 198092769 Mar  7 12:51 shared/HITS.pool.root.1
[2026-03-07 12:52:51]  *** Contents of shared directory: ***
[2026-03-07 12:52:51] total 404652
[2026-03-07 12:52:51] -rw-r--r--. 2 boinc boinc 214474905 Mar  7 11:11 ATLAS.root_0
[2026-03-07 12:52:51] -rw-r--r--. 2 boinc boinc     15845 Mar  7 11:11 start_atlas.sh
[2026-03-07 12:52:51] -rw-r--r--. 2 boinc boinc    597965 Mar  7 11:11 input.tar.gz
[2026-03-07 12:52:51] -rw-------. 1 boinc boinc 198092769 Mar  7 12:51 HITS.pool.root.1
[2026-03-07 12:52:51] -rw-------. 1 boinc boinc   1167360 Mar  7 12:52 result.tar.gz
12:52:52 (2970492): run_atlas exited; CPU time 23349.926717
12:52:52 (2970492): called boinc_finish(0)

</stderr_txt>
]]>

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