Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
10:31:40 (1409507): wrapper (7.7.26015): starting
10:31:40 (1409507): wrapper: running run_atlas (--nthreads 3)
[2026-03-07 10:31:40] Arguments: --nthreads 3
[2026-03-07 10:31:40] Threads: 3
[2026-03-07 10:31:40] Checking for CVMFS
[2026-03-07 10:31:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 10:31:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 10:31:40] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 10:31:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 10:31:40] 2.13.3.0 48832 1487 58752 156995 2 50 5903331 6144000 917 130560 0 681257 99.979 62992 6826 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.210:3128 1
[2026-03-07 10:31:40] CVMFS is ok
[2026-03-07 10:31:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 10:31:40] Checking for apptainer binary...
[2026-03-07 10:31:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 10:31:40] Running /usr/bin/apptainer --version
[2026-03-07 10:31:40] apptainer version 1.4.5
[2026-03-07 10:31:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 10:31:40] TS-P330
[2026-03-07 10:31:40] apptainer works
[2026-03-07 10:31:40] Set ATHENA_PROC_NUMBER=3
[2026-03-07 10:31:40] Set ATHENA_CORE_NUMBER=3
[2026-03-07 10:31:40] Starting ATLAS job with PandaID=7031077335
[2026-03-07 10:31:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 12:46:07]  *** The last 200 lines of the pilot log: ***
[2026-03-07 12:46:07] 2026-03-07 11:45:05,112 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/1/workernode_map.json
[2026-03-07 12:46:07] 2026-03-07 11:45:05,112 | INFO     | this job has now completed (state=finished)
[2026-03-07 12:46:07] 2026-03-07 11:45:05,112 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 12:46:07] 2026-03-07 11:45:05,112 | INFO     | log transfer has been attempted: DONE
[2026-03-07 12:46:07] 2026-03-07 11:45:05,112 | INFO     | job 7031077335 has finished - writing final server update
[2026-03-07 12:46:07] 2026-03-07 11:45:05,112 | INFO     | total number of processed events: 400 (read)
[2026-03-07 12:46:07] 2026-03-07 11:45:05,113 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-7031077335/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 12:46:07] 2026-03-07 11:45:05,113 | INFO     | extracted standard info from prmon json
[2026-03-07 12:46:07] 2026-03-07 11:45:05,113 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 12:46:07] 2026-03-07 11:45:05,113 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 12:46:07] 2026-03-07 11:45:05,113 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 12:46:07] 2026-03-07 11:45:05,113 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 12:46:07] 2026-03-07 11:45:05,114 | INFO     | fitting pss+swap vs Time
[2026-03-07 12:46:07] 2026-03-07 11:45:05,114 | INFO     | sum of square deviations: 697054930.0
[2026-03-07 12:46:07] 2026-03-07 11:45:05,115 | INFO     | sum of deviations: -21983839227.000004
[2026-03-07 12:46:07] 2026-03-07 11:45:05,115 | INFO     | mean x: 1772879888.0
[2026-03-07 12:46:07] 2026-03-07 11:45:05,115 | INFO     | mean y: 2418111.7404580154
[2026-03-07 12:46:07] 2026-03-07 11:45:05,115 | INFO     | intersect: 55915811374.12477
[2026-03-07 12:46:07] 2026-03-07 11:45:05,115 | INFO     | chi2: 1.1728674889060648
[2026-03-07 12:46:07] 2026-03-07 11:45:05,115 | INFO     | sum of square deviations: 620244187.5
[2026-03-07 12:46:07] 2026-03-07 11:45:05,115 | INFO     | sum of deviations: -20529889099.0
[2026-03-07 12:46:07] 2026-03-07 11:45:05,115 | INFO     | mean x: 1772879735.5
[2026-03-07 12:46:07] 2026-03-07 11:45:05,115 | INFO     | mean y: 2420999.714285714
[2026-03-07 12:46:07] 2026-03-07 11:45:05,115 | INFO     | intersect: 58684187131.83053
[2026-03-07 12:46:07] 2026-03-07 11:45:05,115 | INFO     | chi2: 1.1669964123720244
[2026-03-07 12:46:07] 2026-03-07 11:45:05,115 | INFO     | current chi2=1.1669964123720244 (change=0.5005745823440259 %)
[2026-03-07 12:46:07] 2026-03-07 11:45:05,115 | INFO     | right removable region: 125
[2026-03-07 12:46:07] 2026-03-07 11:45:05,116 | INFO     | sum of square deviations: 620244187.5
[2026-03-07 12:46:07] 2026-03-07 11:45:05,116 | INFO     | sum of deviations: -30247171317.500008
[2026-03-07 12:46:07] 2026-03-07 11:45:05,116 | INFO     | mean x: 1772880040.5
[2026-03-07 12:46:07] 2026-03-07 11:45:05,116 | INFO     | mean y: 2433836.0555555555
[2026-03-07 12:46:07] 2026-03-07 11:45:05,116 | INFO     | intersect: 86459683079.33017
[2026-03-07 12:46:07] 2026-03-07 11:45:05,116 | INFO     | chi2: 0.1282348214653263
[2026-03-07 12:46:07] 2026-03-07 11:45:05,116 | INFO     | current chi2=0.1282348214653263 (change=89.0665550304467 %)
[2026-03-07 12:46:07] 2026-03-07 11:45:05,116 | INFO     | sum of square deviations: 549294020.0
[2026-03-07 12:46:07] 2026-03-07 11:45:05,116 | INFO     | sum of deviations: -24910859933.0
[2026-03-07 12:46:07] 2026-03-07 11:45:05,116 | INFO     | mean x: 1772880193.0
[2026-03-07 12:46:07] 2026-03-07 11:45:05,116 | INFO     | mean y: 2422353.0495867766
[2026-03-07 12:46:07] 2026-03-07 11:45:05,116 | INFO     | intersect: 80403753075.37022
[2026-03-07 12:46:07] 2026-03-07 11:45:05,117 | INFO     | chi2: 0.11907108292293143
[2026-03-07 12:46:07] 2026-03-07 11:45:05,117 | INFO     | current chi2=0.11907108292293143 (change=7.146060982252527 %)
[2026-03-07 12:46:07] 2026-03-07 11:45:05,117 | INFO     | left removable region: 20
[2026-03-07 12:46:07] 2026-03-07 11:45:05,117 | INFO     | sum of square deviations: 358927660.0
[2026-03-07 12:46:07] 2026-03-07 11:45:05,117 | INFO     | sum of deviations: -13658217383.0
[2026-03-07 12:46:07] 2026-03-07 11:45:05,117 | INFO     | mean x: 1772880315.0
[2026-03-07 12:46:07] 2026-03-07 11:45:05,117 | INFO     | mean y: 2400659.742857143
[2026-03-07 12:46:07] 2026-03-07 11:45:05,117 | INFO     | intersect: 67465534418.53848
[2026-03-07 12:46:07] 2026-03-07 11:45:05,117 | INFO     | chi2: 0.07775935000276073
[2026-03-07 12:46:07] 2026-03-07 11:45:05,117 | INFO     | current memory leak: -38.05 B/s (using 105 data points, chi2=0.08)
[2026-03-07 12:46:07] 2026-03-07 11:45:05,117 | INFO     | could have reported an average CPU frequency of 3900 MHz (8 samples)
[2026-03-07 12:46:07] 2026-03-07 11:45:05,117 | INFO     | ..............................
[2026-03-07 12:46:07] 2026-03-07 11:45:05,117 | INFO     | . Timing measurements:
[2026-03-07 12:46:07] 2026-03-07 11:45:05,117 | INFO     | . get job = 0 s
[2026-03-07 12:46:07] 2026-03-07 11:45:05,118 | INFO     | . initial setup = 2 s
[2026-03-07 12:46:07] 2026-03-07 11:45:05,118 | INFO     | . payload setup = 2 s
[2026-03-07 12:46:07] 2026-03-07 11:45:05,118 | INFO     | . stage-in = 0 s
[2026-03-07 12:46:07] 2026-03-07 11:45:05,118 | INFO     | . payload execution = 7978 s
[2026-03-07 12:46:07] 2026-03-07 11:45:05,118 | INFO     | . stage-out = 0 s
[2026-03-07 12:46:07] 2026-03-07 11:45:05,118 | INFO     | . log creation = 0 s
[2026-03-07 12:46:07] 2026-03-07 11:45:05,118 | INFO     | ..............................
[2026-03-07 12:46:07] 2026-03-07 11:45:05,149 | INFO     | 
[2026-03-07 12:46:07] 2026-03-07 11:45:05,150 | INFO     | job summary report
[2026-03-07 12:46:07] 2026-03-07 11:45:05,150 | INFO     | --------------------------------------------------
[2026-03-07 12:46:07] 2026-03-07 11:45:05,150 | INFO     | PanDA job id: 7031077335
[2026-03-07 12:46:07] 2026-03-07 11:45:05,150 | INFO     | task id: 48838416
[2026-03-07 12:46:07] 2026-03-07 11:45:05,150 | INFO     | errors: (none)
[2026-03-07 12:46:07] 2026-03-07 11:45:05,150 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 12:46:07] 2026-03-07 11:45:05,150 | INFO     | pilot state: finished 
[2026-03-07 12:46:07] 2026-03-07 11:45:05,150 | INFO     | transexitcode: 0
[2026-03-07 12:46:07] 2026-03-07 11:45:05,150 | INFO     | exeerrorcode: 0
[2026-03-07 12:46:07] 2026-03-07 11:45:05,150 | INFO     | exeerrordiag: 
[2026-03-07 12:46:07] 2026-03-07 11:45:05,150 | INFO     | exitcode: 0
[2026-03-07 12:46:07] 2026-03-07 11:45:05,150 | INFO     | exitmsg: OK
[2026-03-07 12:46:07] 2026-03-07 11:45:05,150 | INFO     | cpuconsumptiontime: 22970 s
[2026-03-07 12:46:07] 2026-03-07 11:45:05,150 | INFO     | nevents: 400
[2026-03-07 12:46:07] 2026-03-07 11:45:05,150 | INFO     | neventsw: 0
[2026-03-07 12:46:07] 2026-03-07 11:45:05,150 | INFO     | pid: 1418274
[2026-03-07 12:46:07] 2026-03-07 11:45:05,150 | INFO     | pgrp: 1418274
[2026-03-07 12:46:07] 2026-03-07 11:45:05,150 | INFO     | corecount: 3
[2026-03-07 12:46:07] 2026-03-07 11:45:05,150 | INFO     | event service: False
[2026-03-07 12:46:07] 2026-03-07 11:45:05,150 | INFO     | sizes: {0: 2295330, 1: 2295791, 11: 2295791, 7984: 2332608, 7987: 2332746}
[2026-03-07 12:46:07] 2026-03-07 11:45:05,150 | INFO     | --------------------------------------------------
[2026-03-07 12:46:07] 2026-03-07 11:45:05,150 | INFO     | 
[2026-03-07 12:46:07] 2026-03-07 11:45:05,150 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-03-07 12:46:07] 2026-03-07 11:45:05,164 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 12:46:07] 2026-03-07 11:45:05,164 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 12:46:07] 2026-03-07 11:45:05,164 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 12:46:07] 2026-03-07 11:45:05,164 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 12:46:07] 2026-03-07 11:45:05,164 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 12:46:07] 2026-03-07 11:45:05,164 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 12:46:07] 2026-03-07 11:45:05,164 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 12:46:07] 2026-03-07 11:45:05,164 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 12:46:07] 2026-03-07 11:45:05,164 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 12:46:07] 2026-03-07 11:45:05,164 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 12:46:07] 2026-03-07 11:45:05,164 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 12:46:07] 2026-03-07 11:45:05,164 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 12:46:07] 2026-03-07 11:45:05,164 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 12:46:07] 2026-03-07 11:45:05,164 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 12:46:07] 2026-03-07 11:45:05,164 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 12:46:07] 2026-03-07 11:45:05,164 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 12:46:07] 2026-03-07 11:45:05,164 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 12:46:07] 2026-03-07 11:45:05,164 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 12:46:07] 2026-03-07 11:45:05,164 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 12:46:07] 2026-03-07 11:45:05,164 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 12:46:07] 2026-03-07 11:45:05,164 | INFO     | job 7031077335 has completed (purged errors)
[2026-03-07 12:46:07] 2026-03-07 11:45:05,164 | INFO     | overall cleanup function is called
[2026-03-07 12:46:07] 2026-03-07 11:45:06,170 | INFO     | --- collectZombieJob: --- 10, [1418274]
[2026-03-07 12:46:07] 2026-03-07 11:45:06,170 | INFO     | zombie collector waiting for pid 1418274
[2026-03-07 12:46:07] 2026-03-07 11:45:06,170 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 12:46:07] 2026-03-07 11:45:06,170 | INFO     | collected zombie processes
[2026-03-07 12:46:07] 2026-03-07 11:45:06,170 | INFO     | will attempt to kill all subprocesses of pid=1418274
[2026-03-07 12:46:07] 2026-03-07 11:45:06,211 | INFO     | process IDs to be killed: [1418274] (in reverse order)
[2026-03-07 12:46:07] 2026-03-07 11:45:06,230 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 12:46:07] 2026-03-07 11:45:06,230 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 12:46:07] 2026-03-07 11:45:06,232 | INFO     | did not find any defunct processes belonging to 1418274
[2026-03-07 12:46:07] 2026-03-07 11:45:06,233 | INFO     | did not find any defunct processes belonging to 1418274
[2026-03-07 12:46:07] 2026-03-07 11:45:06,233 | INFO     | ready for new job
[2026-03-07 12:46:07] 2026-03-07 11:45:06,233 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 12:46:07] 2026-03-07 11:45:06,234 | INFO     | **************************************
[2026-03-07 12:46:07] 2026-03-07 11:45:06,234 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 12:46:07] 2026-03-07 11:45:06,234 | INFO     | **************************************
[2026-03-07 12:46:07] 2026-03-07 11:45:06,234 | INFO     | 
[2026-03-07 12:46:07] 2026-03-07 11:45:06,234 | INFO     | architecture information:
[2026-03-07 12:46:07] 2026-03-07 11:45:06,234 | INFO     | executing command: cat /etc/os-release
[2026-03-07 12:46:07] 2026-03-07 11:45:06,240 | INFO     | cat /etc/os-release:
[2026-03-07 12:46:07] NAME="CentOS Linux"
[2026-03-07 12:46:07] VERSION="7 (Core)"
[2026-03-07 12:46:07] ID="centos"
[2026-03-07 12:46:07] ID_LIKE="rhel fedora"
[2026-03-07 12:46:07] VERSION_ID="7"
[2026-03-07 12:46:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 12:46:07] ANSI_COLOR="0;31"
[2026-03-07 12:46:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 12:46:07] HOME_URL="https://www.centos.org/"
[2026-03-07 12:46:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 12:46:07] 
[2026-03-07 12:46:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 12:46:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 12:46:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 12:46:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 12:46:07] 
[2026-03-07 12:46:07] 2026-03-07 11:45:06,241 | INFO     | **************************************
[2026-03-07 12:46:07] 2026-03-07 11:45:06,743 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-03-07 12:46:07] 2026-03-07 11:45:06,748 | INFO     | sufficient remaining disk space (115080167424 B)
[2026-03-07 12:46:07] 2026-03-07 11:45:06,749 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 12:46:07] 2026-03-07 11:45:06,749 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 12:46:07] 2026-03-07 11:45:06,749 | INFO     | update_server=False
[2026-03-07 12:46:07] 2026-03-07 11:45:06,749 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 12:46:07] 2026-03-07 11:45:06,749 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 12:46:07] 2026-03-07 11:45:06,749 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 12:46:07] 2026-03-07 11:45:07,049 | INFO     | all data control threads have been joined
[2026-03-07 12:46:07] 2026-03-07 11:45:07,170 | WARNING  | process 1418274 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 12:46:07] 2026-03-07 11:45:07,203 | INFO     | using path: /var/lib/boinc/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 12:46:07] 2026-03-07 11:45:07,241 | INFO     | all payload control threads have been joined
[2026-03-07 12:46:07] 2026-03-07 11:45:07,244 | INFO     | number of running child processes to parent process 1418274: 1
[2026-03-07 12:46:07] 2026-03-07 11:45:07,245 | INFO     | maximum number of monitored processes: 6
[2026-03-07 12:46:07] 2026-03-07 11:45:07,245 | INFO     | aborting job monitoring since job object (job id=7031077335) has expired
[2026-03-07 12:46:07] 2026-03-07 11:45:07,245 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 12:46:07] 2026-03-07 11:45:07,245 | INFO     | will abort loop
[2026-03-07 12:46:07] 2026-03-07 11:45:07,752 | INFO     | [job] retrieve thread has finished
[2026-03-07 12:46:07] 2026-03-07 11:45:07,752 | INFO     | [job] queue monitor thread has finished
[2026-03-07 12:46:07] 2026-03-07 11:45:07,882 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 12:46:07] 2026-03-07 11:45:08,054 | INFO     | [data] control thread has finished
[2026-03-07 12:46:07] 2026-03-07 11:45:08,182 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 12:46:07] 2026-03-07 11:45:08,216 | INFO     | [payload] validate_post thread has finished
[2026-03-07 12:46:07] 2026-03-07 11:45:08,246 | INFO     | [payload] control thread has finished
[2026-03-07 12:46:07] 2026-03-07 11:45:08,249 | INFO     | [job] job monitor thread has finished
[2026-03-07 12:46:07] 2026-03-07 11:45:08,365 | INFO     | all job control threads have been joined
[2026-03-07 12:46:07] 2026-03-07 11:45:08,445 | INFO     | [job] validate thread has finished
[2026-03-07 12:46:07] 2026-03-07 11:45:08,448 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 12:46:07] 2026-03-07 11:45:08,491 | INFO     | [payload] failed_post thread has finished
[2026-03-07 12:46:07] 2026-03-07 11:45:08,515 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 12:46:07] 2026-03-07 11:45:08,521 | INFO     | [data] copytool_in thread has finished
[2026-03-07 12:46:07] 2026-03-07 11:45:08,754 | INFO     | [data] copytool_out thread has finished
[2026-03-07 12:46:07] 2026-03-07 11:45:08,801 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 12:46:07] 2026-03-07 11:45:09,370 | INFO     | [job] control thread has finished
[2026-03-07 12:46:07] 2026-03-07 11:45:12,806 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 12:46:07] 2026-03-07 11:45:36,484 | INFO     | PID=1413695 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 12:46:07] 2026-03-07 11:45:36,484 | INFO     | .. there are 2 such processes running
[2026-03-07 12:46:07] 2026-03-07 11:45:36,484 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 12:46:07] 2026-03-07 11:45:36,484 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 12:46:07] 2026-03-07 11:45:36,484 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 12:46:07] 2026-03-07 11:46:00,468 | INFO     | [monitor] cgroup control has ended
[2026-03-07 12:46:07] 2026-03-07 11:46:02,048 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140139937793856)>', '<ExcThread(monitor, started 140139430909696)>']
[2026-03-07 12:46:07] 2026-03-07 11:46:02,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 12:46:07] 2026-03-07 11:46:02,613 | INFO     | [monitor] control thread has ended
[2026-03-07 12:46:07] 2026-03-07 11:46:07,061 | INFO     | all workflow threads have been joined
[2026-03-07 12:46:07] 2026-03-07 11:46:07,061 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 12:46:07] 2026-03-07 11:46:07,061 | INFO     | traces error code: 0
[2026-03-07 12:46:07] 2026-03-07 11:46:07,061 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 12:46:07] 2026-03-07 11:46:07,112 [wrapper] ==== pilot stdout END ====
[2026-03-07 12:46:07] 2026-03-07 11:46:07,113 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 12:46:07] 2026-03-07 11:46:07,114 [wrapper] pilotpid: 1413695
[2026-03-07 12:46:07] 2026-03-07 11:46:07,115 [wrapper] Pilot exit status: 0
[2026-03-07 12:46:07] 2026-03-07 11:46:07,118 [wrapper] pandaids: 7031077335
[2026-03-07 12:46:07] 2026-03-07 11:46:07,128 [wrapper] cleanup supervisor_pilot 1581466 1413696
[2026-03-07 12:46:07] 2026-03-07 11:46:07,129 [wrapper] Test setup, not cleaning
[2026-03-07 12:46:07] 2026-03-07 11:46:07,130 [wrapper] apfmon messages muted
[2026-03-07 12:46:07] 2026-03-07 11:46:07,131 [wrapper] ==== wrapper stdout END ====
[2026-03-07 12:46:07] 2026-03-07 11:46:07,132 [wrapper] ==== wrapper stderr END ====
[2026-03-07 12:46:07]  *** Error codes and diagnostics ***
[2026-03-07 12:46:07]     "exeErrorCode": 0,
[2026-03-07 12:46:07]     "exeErrorDiag": "",
[2026-03-07 12:46:07]     "pilotErrorCode": 0,
[2026-03-07 12:46:07]     "pilotErrorDiag": "",
[2026-03-07 12:46:07]  *** Listing of results directory ***
[2026-03-07 12:46:07] insgesamt 517860
[2026-03-07 12:46:07] -rw-r--r-- 1 boinc boinc      5111 26. Feb 22:47 queuedata.json
[2026-03-07 12:46:07] -rw-r--r-- 1 boinc boinc    584627 26. Feb 22:47 pilot3.tar.gz
[2026-03-07 12:46:07] -rwx------ 1 boinc boinc     36322 26. Feb 22:48 runpilot2-wrapper.sh
[2026-03-07 12:46:07] -rw-r--r-- 1 boinc boinc       100  7. M&#195;&#164;r 10:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 12:46:07] -rwxr-xr-x 1 boinc boinc      7986  7. M&#195;&#164;r 10:31 run_atlas
[2026-03-07 12:46:07] -rw-r--r-- 1 boinc boinc       105  7. M&#195;&#164;r 10:31 job.xml
[2026-03-07 12:46:07] -rw-r--r-- 2 boinc boinc 292407297  7. M&#195;&#164;r 10:31 EVNT.48220085._000062.pool.root.1
[2026-03-07 12:46:07] drwxrwx--x 2 boinc boinc      4096  7. M&#195;&#164;r 10:31 shared
[2026-03-07 12:46:07] -rw-r--r-- 2 boinc boinc    597963  7. M&#195;&#164;r 10:31 input.tar.gz
[2026-03-07 12:46:07] -rw-r--r-- 2 boinc boinc     15845  7. M&#195;&#164;r 10:31 start_atlas.sh
[2026-03-07 12:46:07] -rw-r--r-- 1 boinc boinc         0  7. M&#195;&#164;r 10:31 boinc_setup_complete
[2026-03-07 12:46:07] -rw-r--r-- 1 boinc boinc      6747  7. M&#195;&#164;r 10:31 init_data.xml
[2026-03-07 12:46:07] -rw-r--r-- 1 boinc boinc         0  7. M&#195;&#164;r 10:31 boinc_lockfile
[2026-03-07 12:46:07] -rw-r--r-- 1 boinc boinc      2566  7. M&#195;&#164;r 10:31 pandaJob.out
[2026-03-07 12:46:07] -rw------- 1 boinc boinc        52  7. M&#195;&#164;r 10:31 setup.sh.local
[2026-03-07 12:46:07] -rw------- 1 boinc boinc    999153  7. M&#195;&#164;r 10:31 agis_schedconf.cvmfs.json
[2026-03-07 12:46:07] -rw------- 1 boinc boinc   1521291  7. M&#195;&#164;r 10:31 agis_ddmendpoints.agis.ALL.json
[2026-03-07 12:46:07] -rw------- 1 boinc boinc       425  7. M&#195;&#164;r 10:31 workernode_map.json
[2026-03-07 12:46:07] drwx------ 5 boinc boinc      4096  7. M&#195;&#164;r 10:31 pilot3
[2026-03-07 12:46:07] -rw------- 1 boinc boinc 231002728  7. M&#195;&#164;r 12:44 HITS.48838416._006003.pool.root.1
[2026-03-07 12:46:07] -rw------- 1 boinc boinc        95  7. M&#195;&#164;r 12:44 pilot_heartbeat.json
[2026-03-07 12:46:07] -rw-r--r-- 1 boinc boinc       529  7. M&#195;&#164;r 12:44 boinc_task_state.xml
[2026-03-07 12:46:07] -rw------- 1 boinc boinc      1017  7. M&#195;&#164;r 12:44 memory_monitor_summary.json
[2026-03-07 12:46:07] -rw------- 1 boinc boinc    298373  7. M&#195;&#164;r 12:45 log.48838416._006003.job.log.tgz.1
[2026-03-07 12:46:07] -rw------- 1 boinc boinc      6299  7. M&#195;&#164;r 12:45 heartbeat.json
[2026-03-07 12:46:07] -rw-r--r-- 1 boinc boinc      8192  7. M&#195;&#164;r 12:45 boinc_mmap_file
[2026-03-07 12:46:07] -rw-r--r-- 1 boinc boinc        27  7. M&#195;&#164;r 12:45 wrapper_checkpoint.txt
[2026-03-07 12:46:07] -rw------- 1 boinc boinc      5341  7. M&#195;&#164;r 12:46 pilotlog.txt
[2026-03-07 12:46:07] -rw------- 1 boinc boinc   1167798  7. M&#195;&#164;r 12:46 log.48838416._006003.job.log.1
[2026-03-07 12:46:07] -rw------- 1 boinc boinc       357  7. M&#195;&#164;r 12:46 output.list
[2026-03-07 12:46:07] -rw-r--r-- 1 boinc boinc       620  7. M&#195;&#164;r 12:46 runtime_log
[2026-03-07 12:46:07] -rw------- 1 boinc boinc   1484800  7. M&#195;&#164;r 12:46 result.tar.gz
[2026-03-07 12:46:07] -rw------- 1 boinc boinc       643  7. M&#195;&#164;r 12:46 wJKNDmaOyF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmgh3KDmWYNBKn.diag
[2026-03-07 12:46:07] -rw-r--r-- 1 boinc boinc      9273  7. M&#195;&#164;r 12:46 runtime_log.err
[2026-03-07 12:46:07] -rw-r--r-- 1 boinc boinc     20914  7. M&#195;&#164;r 12:46 stderr.txt
[2026-03-07 12:46:07] HITS file was successfully produced:
[2026-03-07 12:46:07] -rw------- 1 boinc boinc 231002728  7. M&#195;&#164;r 12:44 shared/HITS.pool.root.1
[2026-03-07 12:46:07]  *** Contents of shared directory: ***
[2026-03-07 12:46:07] insgesamt 513208
[2026-03-07 12:46:07] -rw-r--r-- 2 boinc boinc 292407297  7. M&#195;&#164;r 10:31 ATLAS.root_0
[2026-03-07 12:46:07] -rw-r--r-- 2 boinc boinc    597963  7. M&#195;&#164;r 10:31 input.tar.gz
[2026-03-07 12:46:07] -rw-r--r-- 2 boinc boinc     15845  7. M&#195;&#164;r 10:31 start_atlas.sh
[2026-03-07 12:46:07] -rw------- 1 boinc boinc 231002728  7. M&#195;&#164;r 12:44 HITS.pool.root.1
[2026-03-07 12:46:07] -rw------- 1 boinc boinc   1484800  7. M&#195;&#164;r 12:46 result.tar.gz
12:46:08 (1409507): run_atlas exited; CPU time 23024.132956
12:46:08 (1409507): called boinc_finish(0)

</stderr_txt>
]]>

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