Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:06:53 (765779): wrapper (7.7.26015): starting
04:06:53 (765779): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 04:06:53] Arguments: --nthreads 4
[2026-03-07 04:06:53] Threads: 4
[2026-03-07 04:06:53] Checking for CVMFS
[2026-03-07 04:06:53] No cvmfs_config command found, will try listing directly
[2026-03-07 04:06:53] CVMFS is ok
[2026-03-07 04:06:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 04:06:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 04:06:53] Further information can be found at the LHC@home message board.
[2026-03-07 04:06:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 04:06:53] Checking for apptainer binary...
[2026-03-07 04:06:53] which: no apptainer in ((null))
[2026-03-07 04:06:53] apptainer is not installed, using version from CVMFS
[2026-03-07 04:06:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 04:06:53] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-03-07 04:06:53] apptainer works
[2026-03-07 04:06:53] Set ATHENA_PROC_NUMBER=4
[2026-03-07 04:06:53] Set ATHENA_CORE_NUMBER=4
[2026-03-07 04:06:53] Starting ATLAS job with PandaID=7038646317
[2026-03-07 04:06:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 07:18:34]  *** The last 200 lines of the pilot log: ***
[2026-03-07 07:18:34] 2026-03-07 06:17:56,774 | INFO     | using path: /var/lib/boinc/var/slot32/slots/0/PanDA_Pilot-7038646317/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 07:18:34] 2026-03-07 06:17:56,775 | INFO     | extracted standard info from prmon json
[2026-03-07 07:18:34] 2026-03-07 06:17:56,775 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 07:18:34] 2026-03-07 06:17:56,775 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 07:18:34] 2026-03-07 06:17:56,775 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 07:18:34] 2026-03-07 06:17:56,776 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 07:18:34] 2026-03-07 06:17:56,779 | INFO     | fitting pss+swap vs Time
[2026-03-07 07:18:34] 2026-03-07 06:17:56,780 | INFO     | sum of square deviations: 2060343747.0
[2026-03-07 07:18:34] 2026-03-07 06:17:56,781 | INFO     | sum of deviations: 3175943192.4999847
[2026-03-07 07:18:34] 2026-03-07 06:17:56,781 | INFO     | mean x: 1772858554.5
[2026-03-07 07:18:34] 2026-03-07 06:17:56,781 | INFO     | mean y: 2310707.4414893617
[2026-03-07 07:18:34] 2026-03-07 06:17:56,781 | INFO     | intersect: -2730484762.0659776
[2026-03-07 07:18:34] 2026-03-07 06:17:56,782 | INFO     | chi2: 1.9567024559186639
[2026-03-07 07:18:34] 2026-03-07 06:17:56,782 | INFO     | sum of square deviations: 1900284932.0
[2026-03-07 07:18:34] 2026-03-07 06:17:56,783 | INFO     | sum of deviations: 13659175510.000002
[2026-03-07 07:18:34] 2026-03-07 06:17:56,783 | INFO     | mean x: 1772858402.0
[2026-03-07 07:18:34] 2026-03-07 06:17:56,783 | INFO     | mean y: 2320476.2021857924
[2026-03-07 07:18:34] 2026-03-07 06:17:56,784 | INFO     | intersect: -12740918003.20293
[2026-03-07 07:18:34] 2026-03-07 06:17:56,784 | INFO     | chi2: 1.2995595979646515
[2026-03-07 07:18:34] 2026-03-07 06:17:56,784 | INFO     | current chi2=1.2995595979646515 (change=33.58419957854484 %)
[2026-03-07 07:18:34] 2026-03-07 06:17:56,784 | INFO     | sum of square deviations: 1748737904.5
[2026-03-07 07:18:34] 2026-03-07 06:17:56,785 | INFO     | sum of deviations: 13223817961.0
[2026-03-07 07:18:34] 2026-03-07 06:17:56,785 | INFO     | mean x: 1772858249.5
[2026-03-07 07:18:34] 2026-03-07 06:17:56,786 | INFO     | mean y: 2320038.0
[2026-03-07 07:18:34] 2026-03-07 06:17:56,786 | INFO     | intersect: -13403894067.451227
[2026-03-07 07:18:34] 2026-03-07 06:17:56,786 | INFO     | chi2: 1.3004689808053893
[2026-03-07 07:18:34] 2026-03-07 06:17:56,786 | INFO     | current chi2=1.3004689808053893 (change=-0.0699762321144861 %)
[2026-03-07 07:18:34] 2026-03-07 06:17:56,786 | INFO     | right removable region: 177
[2026-03-07 07:18:34] 2026-03-07 06:17:56,786 | INFO     | sum of square deviations: 1900284932.0
[2026-03-07 07:18:34] 2026-03-07 06:17:56,787 | INFO     | sum of deviations: -18802508545.0
[2026-03-07 07:18:34] 2026-03-07 06:17:56,788 | INFO     | mean x: 1772858707.0
[2026-03-07 07:18:34] 2026-03-07 06:17:56,788 | INFO     | mean y: 2331329.7650273223
[2026-03-07 07:18:34] 2026-03-07 06:17:56,788 | INFO     | intersect: 17544011751.533035
[2026-03-07 07:18:34] 2026-03-07 06:17:56,788 | INFO     | chi2: 0.6991168431406795
[2026-03-07 07:18:34] 2026-03-07 06:17:56,788 | INFO     | current chi2=0.6991168431406795 (change=64.27066153947015 %)
[2026-03-07 07:18:34] 2026-03-07 06:17:56,789 | INFO     | sum of square deviations: 1748737904.5
[2026-03-07 07:18:34] 2026-03-07 06:17:56,790 | INFO     | sum of deviations: -16864103950.5
[2026-03-07 07:18:34] 2026-03-07 06:17:56,790 | INFO     | mean x: 1772858859.5
[2026-03-07 07:18:34] 2026-03-07 06:17:56,790 | INFO     | mean y: 2329377.5561797754
[2026-03-07 07:18:34] 2026-03-07 06:17:56,790 | INFO     | intersect: 17099045826.166145
[2026-03-07 07:18:34] 2026-03-07 06:17:56,790 | INFO     | chi2: 0.6983477688400377
[2026-03-07 07:18:34] 2026-03-07 06:17:56,790 | INFO     | current chi2=0.6983477688400377 (change=0.1100065472871197 %)
[2026-03-07 07:18:34] 2026-03-07 06:17:56,791 | INFO     | left removable region: 20
[2026-03-07 07:18:34] 2026-03-07 06:17:56,791 | INFO     | sum of square deviations: 1199940638.0
[2026-03-07 07:18:34] 2026-03-07 06:17:56,792 | INFO     | sum of deviations: -2044692488.9999993
[2026-03-07 07:18:34] 2026-03-07 06:17:56,792 | INFO     | mean x: 1772858829.0
[2026-03-07 07:18:34] 2026-03-07 06:17:56,792 | INFO     | mean y: 2335071.7324840766
[2026-03-07 07:18:34] 2026-03-07 06:17:56,792 | INFO     | intersect: 3023277122.4621916
[2026-03-07 07:18:34] 2026-03-07 06:17:56,792 | INFO     | chi2: 0.013899410834955028
[2026-03-07 07:18:34] 2026-03-07 06:17:56,793 | INFO     | current memory leak: -1.70 B/s (using 157 data points, chi2=0.01)
[2026-03-07 07:18:34] 2026-03-07 06:17:56,793 | INFO     | could have reported an average CPU frequency of 2600 MHz (10 samples)
[2026-03-07 07:18:34] 2026-03-07 06:17:56,793 | INFO     | ..............................
[2026-03-07 07:18:34] 2026-03-07 06:17:56,793 | INFO     | . Timing measurements:
[2026-03-07 07:18:34] 2026-03-07 06:17:56,794 | INFO     | . get job = 0 s
[2026-03-07 07:18:34] 2026-03-07 06:17:56,795 | INFO     | . initial setup = 5 s
[2026-03-07 07:18:34] 2026-03-07 06:17:56,795 | INFO     | . payload setup = 6 s
[2026-03-07 07:18:34] 2026-03-07 06:17:56,795 | INFO     | . stage-in = 0 s
[2026-03-07 07:18:34] 2026-03-07 06:17:56,795 | INFO     | . payload execution = 11419 s
[2026-03-07 07:18:34] 2026-03-07 06:17:56,795 | INFO     | . stage-out = 1 s
[2026-03-07 07:18:34] 2026-03-07 06:17:56,795 | INFO     | . log creation = 0 s
[2026-03-07 07:18:34] 2026-03-07 06:17:56,795 | INFO     | ..............................
[2026-03-07 07:18:34] 2026-03-07 06:17:56,894 | INFO     | 
[2026-03-07 07:18:34] 2026-03-07 06:17:56,895 | INFO     | job summary report
[2026-03-07 07:18:34] 2026-03-07 06:17:56,895 | INFO     | --------------------------------------------------
[2026-03-07 07:18:34] 2026-03-07 06:17:56,895 | INFO     | PanDA job id: 7038646317
[2026-03-07 07:18:34] 2026-03-07 06:17:56,895 | INFO     | task id: 48955006
[2026-03-07 07:18:34] 2026-03-07 06:17:56,895 | INFO     | errors: (none)
[2026-03-07 07:18:34] 2026-03-07 06:17:56,895 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 07:18:34] 2026-03-07 06:17:56,895 | INFO     | pilot state: finished 
[2026-03-07 07:18:34] 2026-03-07 06:17:56,895 | INFO     | transexitcode: 0
[2026-03-07 07:18:34] 2026-03-07 06:17:56,895 | INFO     | exeerrorcode: 0
[2026-03-07 07:18:34] 2026-03-07 06:17:56,895 | INFO     | exeerrordiag: 
[2026-03-07 07:18:34] 2026-03-07 06:17:56,895 | INFO     | exitcode: 0
[2026-03-07 07:18:34] 2026-03-07 06:17:56,896 | INFO     | exitmsg: OK
[2026-03-07 07:18:34] 2026-03-07 06:17:56,896 | INFO     | cpuconsumptiontime: 41123 s
[2026-03-07 07:18:34] 2026-03-07 06:17:56,896 | INFO     | nevents: 400
[2026-03-07 07:18:34] 2026-03-07 06:17:56,896 | INFO     | neventsw: 0
[2026-03-07 07:18:34] 2026-03-07 06:17:56,896 | INFO     | pid: 782355
[2026-03-07 07:18:34] 2026-03-07 06:17:56,896 | INFO     | pgrp: 782355
[2026-03-07 07:18:34] 2026-03-07 06:17:56,896 | INFO     | corecount: 4
[2026-03-07 07:18:34] 2026-03-07 06:17:56,896 | INFO     | event service: False
[2026-03-07 07:18:34] 2026-03-07 06:17:56,896 | INFO     | sizes: {0: 2295323, 1: 2295840, 12: 2295840, 11428: 2325492, 11431: 2334512, 11435: 2334568, 11437: 2334890}
[2026-03-07 07:18:34] 2026-03-07 06:17:56,896 | INFO     | --------------------------------------------------
[2026-03-07 07:18:34] 2026-03-07 06:17:56,896 | INFO     | 
[2026-03-07 07:18:34] 2026-03-07 06:17:56,896 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/0
[2026-03-07 07:18:34] 2026-03-07 06:17:56,904 | INFO     | time since job start (11448s) is within the limit (349056.0s)
[2026-03-07 07:18:34] 2026-03-07 06:17:56,923 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 07:18:34] 2026-03-07 06:17:56,924 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 07:18:34] 2026-03-07 06:17:56,924 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 07:18:34] 2026-03-07 06:17:56,924 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 07:18:34] 2026-03-07 06:17:56,924 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 07:18:34] 2026-03-07 06:17:56,924 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 07:18:34] 2026-03-07 06:17:56,924 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 07:18:34] 2026-03-07 06:17:56,924 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 07:18:34] 2026-03-07 06:17:56,924 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 07:18:34] 2026-03-07 06:17:56,924 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 07:18:34] 2026-03-07 06:17:56,924 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 07:18:34] 2026-03-07 06:17:56,925 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 07:18:34] 2026-03-07 06:17:56,925 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 07:18:34] 2026-03-07 06:17:56,925 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 07:18:34] 2026-03-07 06:17:56,925 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 07:18:34] 2026-03-07 06:17:56,925 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 07:18:34] 2026-03-07 06:17:56,925 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 07:18:34] 2026-03-07 06:17:56,925 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 07:18:34] 2026-03-07 06:17:56,925 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 07:18:34] 2026-03-07 06:17:56,925 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 07:18:34] 2026-03-07 06:17:56,926 | INFO     | job 7038646317 has completed (purged errors)
[2026-03-07 07:18:34] 2026-03-07 06:17:56,926 | INFO     | overall cleanup function is called
[2026-03-07 07:18:34] 2026-03-07 06:17:57,933 | INFO     | --- collectZombieJob: --- 10, [782355]
[2026-03-07 07:18:34] 2026-03-07 06:17:57,934 | INFO     | zombie collector waiting for pid 782355
[2026-03-07 07:18:34] 2026-03-07 06:17:57,934 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 07:18:34] 2026-03-07 06:17:57,934 | INFO     | collected zombie processes
[2026-03-07 07:18:34] 2026-03-07 06:17:57,934 | INFO     | will attempt to kill all subprocesses of pid=782355
[2026-03-07 07:18:34] 2026-03-07 06:17:58,389 | INFO     | process IDs to be killed: [782355] (in reverse order)
[2026-03-07 07:18:34] 2026-03-07 06:17:58,546 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 07:18:34] 2026-03-07 06:17:58,547 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 07:18:34] 2026-03-07 06:17:58,559 | INFO     | did not find any defunct processes belonging to 782355
[2026-03-07 07:18:34] 2026-03-07 06:17:58,571 | INFO     | did not find any defunct processes belonging to 782355
[2026-03-07 07:18:34] 2026-03-07 06:17:58,571 | INFO     | ready for new job
[2026-03-07 07:18:34] 2026-03-07 06:17:58,571 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 07:18:34] 2026-03-07 06:17:58,574 | INFO     | **************************************
[2026-03-07 07:18:34] 2026-03-07 06:17:58,574 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 07:18:34] 2026-03-07 06:17:58,574 | INFO     | **************************************
[2026-03-07 07:18:34] 2026-03-07 06:17:58,574 | INFO     | 
[2026-03-07 07:18:34] 2026-03-07 06:17:58,578 | INFO     | architecture information:
[2026-03-07 07:18:34] 2026-03-07 06:17:58,578 | INFO     | executing command: cat /etc/os-release
[2026-03-07 07:18:34] 2026-03-07 06:17:58,606 | INFO     | cat /etc/os-release:
[2026-03-07 07:18:34] NAME="CentOS Linux"
[2026-03-07 07:18:34] VERSION="7 (Core)"
[2026-03-07 07:18:34] ID="centos"
[2026-03-07 07:18:34] ID_LIKE="rhel fedora"
[2026-03-07 07:18:34] VERSION_ID="7"
[2026-03-07 07:18:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 07:18:34] ANSI_COLOR="0;31"
[2026-03-07 07:18:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 07:18:34] HOME_URL="https://www.centos.org/"
[2026-03-07 07:18:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 07:18:34] 
[2026-03-07 07:18:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 07:18:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 07:18:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 07:18:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 07:18:34] 
[2026-03-07 07:18:34] 2026-03-07 06:17:58,607 | INFO     | **************************************
[2026-03-07 07:18:34] 2026-03-07 06:17:59,109 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/0
[2026-03-07 07:18:34] 2026-03-07 06:17:59,127 | INFO     | sufficient remaining disk space (20354957312 B)
[2026-03-07 07:18:34] 2026-03-07 06:17:59,128 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 07:18:34] 2026-03-07 06:17:59,128 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 07:18:34] 2026-03-07 06:17:59,128 | INFO     | update_server=False
[2026-03-07 07:18:34] 2026-03-07 06:17:59,128 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 07:18:34] 2026-03-07 06:17:59,307 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 07:18:34] 2026-03-07 06:17:59,406 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-07 07:18:34] 2026-03-07 06:17:59,407 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-07 07:18:34] 2026-03-07 06:17:59,407 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 07:18:34] 2026-03-07 06:17:59,407 | INFO     | will abort loop
[2026-03-07 07:18:34] 2026-03-07 06:17:59,799 | INFO     | all data control threads have been joined
[2026-03-07 07:18:34] 2026-03-07 06:17:59,889 | INFO     | all job control threads have been joined
[2026-03-07 07:18:34] 2026-03-07 06:18:00,134 | INFO     | [job] retrieve thread has finished
[2026-03-07 07:18:34] 2026-03-07 06:18:00,181 | INFO     | all payload control threads have been joined
[2026-03-07 07:18:34] 2026-03-07 06:18:00,365 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 07:18:34] 2026-03-07 06:18:00,412 | INFO     | [job] job monitor thread has finished
[2026-03-07 07:18:34] 2026-03-07 06:18:00,611 | INFO     | [payload] validate_post thread has finished
[2026-03-07 07:18:34] 2026-03-07 06:18:00,635 | INFO     | [payload] failed_post thread has finished
[2026-03-07 07:18:34] 2026-03-07 06:18:00,753 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 07:18:34] 2026-03-07 06:18:00,805 | INFO     | [data] control thread has finished
[2026-03-07 07:18:34] 2026-03-07 06:18:00,895 | INFO     | [job] control thread has finished
[2026-03-07 07:18:34] 2026-03-07 06:18:01,147 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 07:18:34] 2026-03-07 06:18:01,187 | INFO     | [payload] control thread has finished
[2026-03-07 07:18:34] 2026-03-07 06:18:01,313 | INFO     | [job] validate thread has finished
[2026-03-07 07:18:34] 2026-03-07 06:18:01,313 | INFO     | [data] copytool_out thread has finished
[2026-03-07 07:18:34] 2026-03-07 06:18:01,329 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 07:18:34] 2026-03-07 06:18:01,481 | INFO     | [data] copytool_in thread has finished
[2026-03-07 07:18:34] 2026-03-07 06:18:01,910 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 07:18:34] 2026-03-07 06:18:02,915 | INFO     | [job] queue monitor thread has finished
[2026-03-07 07:18:34] 2026-03-07 06:18:04,758 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 07:18:34] 2026-03-07 06:18:09,825 | INFO     | job.realtimelogging is not enabled
[2026-03-07 07:18:34] 2026-03-07 06:18:10,830 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 07:18:34] 2026-03-07 06:18:27,160 | INFO     | [monitor] cgroup control has ended
[2026-03-07 07:18:34] 2026-03-07 06:18:29,024 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22538954856256)>', '<ExcThread(monitor, started 22538646189824)>']
[2026-03-07 07:18:34] 2026-03-07 06:18:30,501 | INFO     | PID=772618 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-07 07:18:34] 2026-03-07 06:18:30,501 | INFO     | .. there are 13 such processes running
[2026-03-07 07:18:34] 2026-03-07 06:18:30,502 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 07:18:34] 2026-03-07 06:18:30,502 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 07:18:34] 2026-03-07 06:18:30,502 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 07:18:34] 2026-03-07 06:18:30,502 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 07:18:34] 2026-03-07 06:18:30,502 | INFO     | [monitor] control thread has ended
[2026-03-07 07:18:34] 2026-03-07 06:18:34,048 | INFO     | all workflow threads have been joined
[2026-03-07 07:18:34] 2026-03-07 06:18:34,049 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 07:18:34] 2026-03-07 06:18:34,049 | INFO     | traces error code: 0
[2026-03-07 07:18:34] 2026-03-07 06:18:34,049 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 07:18:34] 2026-03-07 06:18:34,212 [wrapper] ==== pilot stdout END ====
[2026-03-07 07:18:34] 2026-03-07 06:18:34,215 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 07:18:34] 2026-03-07 06:18:34,248 [wrapper] pilotpid: 772618
[2026-03-07 07:18:34] 2026-03-07 06:18:34,275 [wrapper] Pilot exit status: 0
[2026-03-07 07:18:34] 2026-03-07 06:18:34,334 [wrapper] pandaids: 7038646317
[2026-03-07 07:18:34] 2026-03-07 06:18:34,423 [wrapper] cleanup supervisor_pilot 1013918 772619
[2026-03-07 07:18:34] 2026-03-07 06:18:34,427 [wrapper] Test setup, not cleaning
[2026-03-07 07:18:34] 2026-03-07 06:18:34,430 [wrapper] apfmon messages muted
[2026-03-07 07:18:34] 2026-03-07 06:18:34,433 [wrapper] ==== wrapper stdout END ====
[2026-03-07 07:18:34] 2026-03-07 06:18:34,435 [wrapper] ==== wrapper stderr END ====
[2026-03-07 07:18:34]  *** Error codes and diagnostics ***
[2026-03-07 07:18:34]     "exeErrorCode": 0,
[2026-03-07 07:18:34]     "exeErrorDiag": "",
[2026-03-07 07:18:34]     "pilotErrorCode": 0,
[2026-03-07 07:18:34]     "pilotErrorDiag": "",
[2026-03-07 07:18:34]  *** Listing of results directory ***
[2026-03-07 07:18:34] total 618756
[2026-03-07 07:18:34] -rw-r--r--. 1 boinc boinc    584627 Mar  5 16:50 pilot3.tar.gz
[2026-03-07 07:18:34] -rwx------. 1 boinc boinc     36322 Mar  5 16:50 runpilot2-wrapper.sh
[2026-03-07 07:18:34] -rw-r--r--. 1 boinc boinc      5111 Mar  5 16:51 queuedata.json
[2026-03-07 07:18:34] -rw-r--r--. 1 boinc boinc       100 Mar  7 04:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 07:18:34] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 04:06 run_atlas
[2026-03-07 07:18:34] -rw-r--r--. 1 boinc boinc       105 Mar  7 04:06 job.xml
[2026-03-07 07:18:34] -rw-r--r--. 2 boinc boinc 439089662 Mar  7 04:06 EVNT.46701403._000173.pool.root.1
[2026-03-07 07:18:34] -rw-r--r--. 1 boinc boinc      6560 Mar  7 04:06 init_data.xml
[2026-03-07 07:18:34] -rw-r--r--. 2 boinc boinc     15845 Mar  7 04:06 start_atlas.sh
[2026-03-07 07:18:34] drwxrwx--x. 2 boinc boinc      4096 Mar  7 04:06 shared
[2026-03-07 07:18:34] -rw-r--r--. 2 boinc boinc    597952 Mar  7 04:06 input.tar.gz
[2026-03-07 07:18:34] -rw-r--r--. 1 boinc boinc         0 Mar  7 04:06 boinc_lockfile
[2026-03-07 07:18:34] -rw-r--r--. 1 boinc boinc      2562 Mar  7 04:06 pandaJob.out
[2026-03-07 07:18:34] -rw-------. 1 boinc boinc    999186 Mar  7 04:07 agis_schedconf.cvmfs.json
[2026-03-07 07:18:34] -rw-------. 1 boinc boinc       451 Mar  7 04:07 workernode_map.json
[2026-03-07 07:18:34] drwx------. 5 boinc boinc      4096 Mar  7 04:07 pilot3
[2026-03-07 07:18:34] -rw-------. 1 boinc boinc 186576328 Mar  7 07:17 HITS.48955006._008638.pool.root.1
[2026-03-07 07:18:34] -rw-r--r--. 1 boinc boinc       530 Mar  7 07:17 boinc_task_state.xml
[2026-03-07 07:18:34] -rw-------. 1 boinc boinc        95 Mar  7 07:17 pilot_heartbeat.json
[2026-03-07 07:18:34] -rw-------. 1 boinc boinc      1047 Mar  7 07:17 memory_monitor_summary.json
[2026-03-07 07:18:34] -rw-------. 1 boinc boinc   1521291 Mar  7 07:17 agis_ddmendpoints.agis.ALL.json
[2026-03-07 07:18:34] -rw-------. 1 boinc boinc    392401 Mar  7 07:17 log.48955006._008638.job.log.tgz.1
[2026-03-07 07:18:34] -rw-------. 1 boinc boinc      6406 Mar  7 07:17 heartbeat.json
[2026-03-07 07:18:34] -rw-r--r--. 1 boinc boinc      8192 Mar  7 07:18 boinc_mmap_file
[2026-03-07 07:18:34] -rw-r--r--. 1 boinc boinc        27 Mar  7 07:18 wrapper_checkpoint.txt
[2026-03-07 07:18:34] -rw-------. 1 boinc boinc      5086 Mar  7 07:18 pilotlog.txt
[2026-03-07 07:18:34] -rw-------. 1 boinc boinc   1610484 Mar  7 07:18 log.48955006._008638.job.log.1
[2026-03-07 07:18:34] -rw-------. 1 boinc boinc       357 Mar  7 07:18 output.list
[2026-03-07 07:18:34] -rw-r--r--. 1 boinc boinc       620 Mar  7 07:18 runtime_log
[2026-03-07 07:18:34] -rw-------. 1 boinc boinc   2017280 Mar  7 07:18 result.tar.gz
[2026-03-07 07:18:34] -rw-r--r--. 1 boinc boinc      9205 Mar  7 07:18 runtime_log.err
[2026-03-07 07:18:34] -rw-------. 1 boinc boinc       665 Mar  7 07:18 MDSLDmh9PI9n9Rq4apOajLDm4fhM0noT9bVooX4SDm1DMLDmeU9tpm.diag
[2026-03-07 07:18:34] -rw-r--r--. 1 boinc boinc     20831 Mar  7 07:18 stderr.txt
[2026-03-07 07:18:34] HITS file was successfully produced:
[2026-03-07 07:18:34] -rw-------. 1 boinc boinc 186576328 Mar  7 07:17 shared/HITS.pool.root.1
[2026-03-07 07:18:34]  *** Contents of shared directory: ***
[2026-03-07 07:18:34] total 613584
[2026-03-07 07:18:34] -rw-r--r--. 2 boinc boinc 439089662 Mar  7 04:06 ATLAS.root_0
[2026-03-07 07:18:34] -rw-r--r--. 2 boinc boinc     15845 Mar  7 04:06 start_atlas.sh
[2026-03-07 07:18:34] -rw-r--r--. 2 boinc boinc    597952 Mar  7 04:06 input.tar.gz
[2026-03-07 07:18:34] -rw-------. 1 boinc boinc 186576328 Mar  7 07:17 HITS.pool.root.1
[2026-03-07 07:18:34] -rw-------. 1 boinc boinc   2017280 Mar  7 07:18 result.tar.gz
07:18:36 (765779): run_atlas exited; CPU time 41584.038104
07:18:36 (765779): called boinc_finish(0)

</stderr_txt>
]]>

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