Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:58:02 (2327709): wrapper (7.7.26015): starting
03:58:02 (2327709): wrapper: running run_atlas (--nthreads 9)
[2026-03-06 03:58:02] Arguments: --nthreads 9
[2026-03-06 03:58:02] Threads: 9
[2026-03-06 03:58:02] Checking for CVMFS
[2026-03-06 03:58:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 03:58:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 03:58:02] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 03:58:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 03:58:02] 2.13.3.0 313591 97336 115628 156950 2 50 22421282 37030912 1832 16776704 0 77231205 99.990 3560349 28518 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-06 03:58:02] CVMFS is ok
[2026-03-06 03:58:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 03:58:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 03:58:02] Further information can be found at the LHC@home message board.
[2026-03-06 03:58:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 03:58:02] Checking for apptainer binary...
[2026-03-06 03:58:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-06 03:58:02] Running /usr/bin/apptainer --version
[2026-03-06 03:58:02] apptainer version 1.4.5-3.el9
[2026-03-06 03:58:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 03:58:03] c-205-37.aglt2.org
[2026-03-06 03:58:03] apptainer works
[2026-03-06 03:58:03] Set ATHENA_PROC_NUMBER=9
[2026-03-06 03:58:03] Set ATHENA_CORE_NUMBER=9
[2026-03-06 03:58:03] Starting ATLAS job with PandaID=7042830449
[2026-03-06 03:58:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 05:32:54]  *** The last 200 lines of the pilot log: ***
[2026-03-06 05:32:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-06 05:32:54]  replicas=None
[2026-03-06 05:32:54]  scope=mc23_13p6TeV
[2026-03-06 05:32:54]  status=None
[2026-03-06 05:32:54]  status_code=0
[2026-03-06 05:32:54]  storage_token=
[2026-03-06 05:32:54]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-7042830449/log.48958635._000798.job.log.tgz.1
[2026-03-06 05:32:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/4f/log.48958635._000798.job.log.tgz.1
[2026-03-06 05:32:54]  workdir=None
[2026-03-06 05:32:54] ]
[2026-03-06 05:32:54] 2026-03-06 10:32:21,915 | INFO     | transferring file log.48958635._000798.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-7042830449/log.48958635._000798.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-06 05:32:54] 2026-03-06 10:32:21,915 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-7042830449/log.48958635._000798.job.log.tgz.1 /tmp/boinchome/slots/1/log.48958635._000798.job
[2026-03-06 05:32:54] 2026-03-06 10:32:21,926 | INFO     | adding to output.list: log.48958635._000798.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/4f/log.48958635._000798.job.log.tg
[2026-03-06 05:32:54] 2026-03-06 10:32:21,927 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-06 05:32:54] 2026-03-06 10:32:21,927 | INFO     | summary of transferred files:
[2026-03-06 05:32:54] 2026-03-06 10:32:21,927 | INFO     |  -- lfn=log.48958635._000798.job.log.tgz.1, status_code=0, status=transferred
[2026-03-06 05:32:54] 2026-03-06 10:32:21,927 | INFO     | stage-out finished correctly
[2026-03-06 05:32:54] 2026-03-06 10:32:21,980 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-06 05:32:54] 2026-03-06 10:32:23,071 | INFO     | job 7042830449 has state=finished
[2026-03-06 05:32:54] 2026-03-06 10:32:23,072 | INFO     | preparing for final server update for job 7042830449 in state='finished'
[2026-03-06 05:32:54] 2026-03-06 10:32:23,072 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7042830449/jobReport.json
[2026-03-06 05:32:54] 2026-03-06 10:32:23,073 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-03-06 05:32:54] 2026-03-06 10:32:23,074 | INFO     | this job has now completed (state=finished)
[2026-03-06 05:32:54] 2026-03-06 10:32:23,074 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-06 05:32:54] 2026-03-06 10:32:23,074 | INFO     | log transfer has been attempted: DONE
[2026-03-06 05:32:54] 2026-03-06 10:32:23,074 | INFO     | job 7042830449 has finished - writing final server update
[2026-03-06 05:32:54] 2026-03-06 10:32:23,074 | INFO     | total number of processed events: 400 (read)
[2026-03-06 05:32:54] 2026-03-06 10:32:23,078 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7042830449/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 05:32:54] 2026-03-06 10:32:23,078 | INFO     | extracted standard info from prmon json
[2026-03-06 05:32:54] 2026-03-06 10:32:23,078 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 05:32:54] 2026-03-06 10:32:23,078 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 05:32:54] 2026-03-06 10:32:23,079 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 05:32:54] 2026-03-06 10:32:23,079 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 05:32:54] 2026-03-06 10:32:23,080 | INFO     | fitting pss+swap vs Time
[2026-03-06 05:32:54] 2026-03-06 10:32:23,080 | INFO     | sum of square deviations: 197203697.5
[2026-03-06 05:32:54] 2026-03-06 10:32:23,080 | INFO     | sum of deviations: -7298385290.5
[2026-03-06 05:32:54] 2026-03-06 10:32:23,080 | INFO     | mean x: 1772790414.5
[2026-03-06 05:32:54] 2026-03-06 10:32:23,080 | INFO     | mean y: 2640792.802325581
[2026-03-06 05:32:54] 2026-03-06 10:32:23,081 | INFO     | intersect: 65612503327.58668
[2026-03-06 05:32:54] 2026-03-06 10:32:23,081 | INFO     | chi2: 0.07984488796371045
[2026-03-06 05:32:54] 2026-03-06 10:32:23,081 | INFO     | current memory leak: -37.01 B/s (using 86 data points, chi2=0.08)
[2026-03-06 05:32:54] 2026-03-06 10:32:23,081 | INFO     | could have reported an average CPU frequency of 2731 MHz (7 samples)
[2026-03-06 05:32:54] 2026-03-06 10:32:23,081 | INFO     | ..............................
[2026-03-06 05:32:54] 2026-03-06 10:32:23,081 | INFO     | . Timing measurements:
[2026-03-06 05:32:54] 2026-03-06 10:32:23,081 | INFO     | . get job = 0 s
[2026-03-06 05:32:54] 2026-03-06 10:32:23,081 | INFO     | . initial setup = 6 s
[2026-03-06 05:32:54] 2026-03-06 10:32:23,081 | INFO     | . payload setup = 4 s
[2026-03-06 05:32:54] 2026-03-06 10:32:23,081 | INFO     | . stage-in = 0 s
[2026-03-06 05:32:54] 2026-03-06 10:32:23,082 | INFO     | . payload execution = 5624 s
[2026-03-06 05:32:54] 2026-03-06 10:32:23,082 | INFO     | . stage-out = 0 s
[2026-03-06 05:32:54] 2026-03-06 10:32:23,082 | INFO     | . log creation = 0 s
[2026-03-06 05:32:54] 2026-03-06 10:32:23,082 | INFO     | ..............................
[2026-03-06 05:32:54] 2026-03-06 10:32:23,501 | INFO     | 
[2026-03-06 05:32:54] 2026-03-06 10:32:23,501 | INFO     | job summary report
[2026-03-06 05:32:54] 2026-03-06 10:32:23,501 | INFO     | --------------------------------------------------
[2026-03-06 05:32:54] 2026-03-06 10:32:23,501 | INFO     | PanDA job id: 7042830449
[2026-03-06 05:32:54] 2026-03-06 10:32:23,502 | INFO     | task id: 48958635
[2026-03-06 05:32:54] 2026-03-06 10:32:23,502 | INFO     | errors: (none)
[2026-03-06 05:32:54] 2026-03-06 10:32:23,502 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 05:32:54] 2026-03-06 10:32:23,502 | INFO     | pilot state: finished 
[2026-03-06 05:32:54] 2026-03-06 10:32:23,502 | INFO     | transexitcode: 0
[2026-03-06 05:32:54] 2026-03-06 10:32:23,502 | INFO     | exeerrorcode: 0
[2026-03-06 05:32:54] 2026-03-06 10:32:23,502 | INFO     | exeerrordiag: 
[2026-03-06 05:32:54] 2026-03-06 10:32:23,502 | INFO     | exitcode: 0
[2026-03-06 05:32:54] 2026-03-06 10:32:23,502 | INFO     | exitmsg: OK
[2026-03-06 05:32:54] 2026-03-06 10:32:23,503 | INFO     | cpuconsumptiontime: 47108 s
[2026-03-06 05:32:54] 2026-03-06 10:32:23,503 | INFO     | nevents: 400
[2026-03-06 05:32:54] 2026-03-06 10:32:23,503 | INFO     | neventsw: 0
[2026-03-06 05:32:54] 2026-03-06 10:32:23,503 | INFO     | pid: 2335774
[2026-03-06 05:32:54] 2026-03-06 10:32:23,503 | INFO     | pgrp: 2335774
[2026-03-06 05:32:54] 2026-03-06 10:32:23,503 | INFO     | corecount: 9
[2026-03-06 05:32:54] 2026-03-06 10:32:23,503 | INFO     | event service: False
[2026-03-06 05:32:54] 2026-03-06 10:32:23,503 | INFO     | sizes: {0: 2295325, 1: 2295786, 11: 2295786, 5633: 2322506, 5634: 2331560, 5635: 2331698}
[2026-03-06 05:32:54] 2026-03-06 10:32:23,503 | INFO     | --------------------------------------------------
[2026-03-06 05:32:54] 2026-03-06 10:32:23,504 | INFO     | 
[2026-03-06 05:32:54] 2026-03-06 10:32:23,504 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-06 05:32:54] 2026-03-06 10:32:23,516 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 05:32:54] 2026-03-06 10:32:23,516 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 05:32:54] 2026-03-06 10:32:23,516 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 05:32:54] 2026-03-06 10:32:23,516 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 05:32:54] 2026-03-06 10:32:23,516 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 05:32:54] 2026-03-06 10:32:23,517 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 05:32:54] 2026-03-06 10:32:23,517 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 05:32:54] 2026-03-06 10:32:23,517 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 05:32:54] 2026-03-06 10:32:23,517 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 05:32:54] 2026-03-06 10:32:23,517 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 05:32:54] 2026-03-06 10:32:23,517 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 05:32:54] 2026-03-06 10:32:23,517 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 05:32:54] 2026-03-06 10:32:23,517 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 05:32:54] 2026-03-06 10:32:23,517 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 05:32:54] 2026-03-06 10:32:23,517 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 05:32:54] 2026-03-06 10:32:23,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 05:32:54] 2026-03-06 10:32:23,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 05:32:54] 2026-03-06 10:32:23,517 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 05:32:54] 2026-03-06 10:32:23,517 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 05:32:54] 2026-03-06 10:32:23,517 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 05:32:54] 2026-03-06 10:32:23,518 | INFO     | job 7042830449 has completed (purged errors)
[2026-03-06 05:32:54] 2026-03-06 10:32:23,518 | INFO     | overall cleanup function is called
[2026-03-06 05:32:54] 2026-03-06 10:32:24,386 | WARNING  | process 2335774 can no longer be monitored (due to stat problems) - aborting
[2026-03-06 05:32:54] 2026-03-06 10:32:24,474 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 05:32:54] 2026-03-06 10:32:24,474 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 05:32:54] 2026-03-06 10:32:24,475 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-06 05:32:54] 2026-03-06 10:32:24,475 | WARNING  | maxPSS not found in memory monitor output
[2026-03-06 05:32:54] 2026-03-06 10:32:24,475 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/1/PanDA_Pilot-7042830449/payload.stdout) since it has not been created yet
[2026-03-06 05:32:54] 2026-03-06 10:32:24,475 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-06 05:32:54] 2026-03-06 10:32:24,483 | INFO     | sufficient remaining disk space (40968912896 B)
[2026-03-06 05:32:54] 2026-03-06 10:32:24,484 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-06 05:32:54] 2026-03-06 10:32:24,484 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-7042830449/HITS.48958635._000798.pool.root.1 since it does not exist
[2026-03-06 05:32:54] 2026-03-06 10:32:24,525 | INFO     | --- collectZombieJob: --- 10, [2335774]
[2026-03-06 05:32:54] 2026-03-06 10:32:24,525 | INFO     | zombie collector waiting for pid 2335774
[2026-03-06 05:32:54] 2026-03-06 10:32:24,525 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 05:32:54] 2026-03-06 10:32:24,525 | INFO     | collected zombie processes
[2026-03-06 05:32:54] 2026-03-06 10:32:24,526 | INFO     | will attempt to kill all subprocesses of pid=2335774
[2026-03-06 05:32:54] 2026-03-06 10:32:24,722 | INFO     | number of running child processes to parent process 2335774: 1
[2026-03-06 05:32:54] 2026-03-06 10:32:24,722 | INFO     | maximum number of monitored processes: 6
[2026-03-06 05:32:54] 2026-03-06 10:32:24,722 | INFO     | aborting job monitoring since job object (job id=7042830449) has expired
[2026-03-06 05:32:54] 2026-03-06 10:32:24,743 | INFO     | process IDs to be killed: [2335774] (in reverse order)
[2026-03-06 05:32:54] 2026-03-06 10:32:24,774 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 05:32:54] 2026-03-06 10:32:24,774 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 05:32:54] 2026-03-06 10:32:24,777 | INFO     | did not find any defunct processes belonging to 2335774
[2026-03-06 05:32:54] 2026-03-06 10:32:24,780 | INFO     | did not find any defunct processes belonging to 2335774
[2026-03-06 05:32:54] 2026-03-06 10:32:24,780 | INFO     | ready for new job
[2026-03-06 05:32:54] 2026-03-06 10:32:24,780 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 05:32:54] 2026-03-06 10:32:24,781 | INFO     | **************************************
[2026-03-06 05:32:54] 2026-03-06 10:32:24,782 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 05:32:54] 2026-03-06 10:32:24,782 | INFO     | **************************************
[2026-03-06 05:32:54] 2026-03-06 10:32:24,782 | INFO     | 
[2026-03-06 05:32:54] 2026-03-06 10:32:24,783 | INFO     | architecture information:
[2026-03-06 05:32:54] 2026-03-06 10:32:24,783 | INFO     | executing command: cat /etc/os-release
[2026-03-06 05:32:54] 2026-03-06 10:32:24,792 | INFO     | cat /etc/os-release:
[2026-03-06 05:32:54] NAME="CentOS Linux"
[2026-03-06 05:32:54] VERSION="7 (Core)"
[2026-03-06 05:32:54] ID="centos"
[2026-03-06 05:32:54] ID_LIKE="rhel fedora"
[2026-03-06 05:32:54] VERSION_ID="7"
[2026-03-06 05:32:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 05:32:54] ANSI_COLOR="0;31"
[2026-03-06 05:32:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 05:32:54] HOME_URL="https://www.centos.org/"
[2026-03-06 05:32:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 05:32:54] 
[2026-03-06 05:32:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 05:32:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 05:32:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 05:32:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 05:32:54] 
[2026-03-06 05:32:54] 2026-03-06 10:32:24,792 | INFO     | **************************************
[2026-03-06 05:32:54] 2026-03-06 10:32:25,295 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-06 05:32:54] 2026-03-06 10:32:25,303 | INFO     | sufficient remaining disk space (40963670016 B)
[2026-03-06 05:32:54] 2026-03-06 10:32:25,303 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 05:32:54] 2026-03-06 10:32:25,303 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 05:32:54] 2026-03-06 10:32:25,303 | INFO     | update_server=False
[2026-03-06 05:32:54] 2026-03-06 10:32:25,304 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 05:32:54] 2026-03-06 10:32:25,304 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 05:32:54] 2026-03-06 10:32:25,304 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 05:32:54] 2026-03-06 10:32:25,304 | INFO     | will abort loop
[2026-03-06 05:32:54] 2026-03-06 10:32:25,452 | INFO     | [monitor] cgroup control has ended
[2026-03-06 05:32:54] 2026-03-06 10:32:25,482 | INFO     | all data control threads have been joined
[2026-03-06 05:32:54] 2026-03-06 10:32:26,027 | INFO     | all payload control threads have been joined
[2026-03-06 05:32:54] 2026-03-06 10:32:26,128 | INFO     | all job control threads have been joined
[2026-03-06 05:32:54] 2026-03-06 10:32:26,308 | INFO     | [job] retrieve thread has finished
[2026-03-06 05:32:54] 2026-03-06 10:32:26,310 | INFO     | [job] job monitor thread has finished
[2026-03-06 05:32:54] 2026-03-06 10:32:26,463 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 05:32:54] 2026-03-06 10:32:26,483 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 05:32:54] 2026-03-06 10:32:26,487 | INFO     | [data] control thread has finished
[2026-03-06 05:32:54] 2026-03-06 10:32:26,665 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 05:32:54] 2026-03-06 10:32:26,802 | INFO     | [payload] failed_post thread has finished
[2026-03-06 05:32:54] 2026-03-06 10:32:26,911 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 05:32:54] 2026-03-06 10:32:26,924 | INFO     | [data] copytool_in thread has finished
[2026-03-06 05:32:54] 2026-03-06 10:32:27,032 | INFO     | [payload] control thread has finished
[2026-03-06 05:32:54] 2026-03-06 10:32:27,133 | INFO     | [job] control thread has finished
[2026-03-06 05:32:54] 2026-03-06 10:32:27,186 | INFO     | [payload] validate_post thread has finished
[2026-03-06 05:32:54] 2026-03-06 10:32:27,310 | INFO     | [data] copytool_out thread has finished
[2026-03-06 05:32:54] 2026-03-06 10:32:27,583 | INFO     | [job] validate thread has finished
[2026-03-06 05:32:54] 2026-03-06 10:32:28,036 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 05:32:54] 2026-03-06 10:32:28,144 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 05:32:54] 2026-03-06 10:32:29,149 | INFO     | [job] queue monitor thread has finished
[2026-03-06 05:32:54] 2026-03-06 10:32:32,041 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 05:32:54] 2026-03-06 10:32:34,059 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140483444451136)>', '<ExcThread(monitor, started 140483161765632)>']
[2026-03-06 05:32:54] 2026-03-06 10:32:39,067 | INFO     | all workflow threads have been joined
[2026-03-06 05:32:54] 2026-03-06 10:32:39,068 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 05:32:54] 2026-03-06 10:32:39,068 | INFO     | traces error code: 0
[2026-03-06 05:32:54] 2026-03-06 10:32:39,068 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 05:32:54] 2026-03-06 10:32:54,749 | INFO     | PID=2331402 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 05:32:54] 2026-03-06 10:32:54,749 | INFO     | .. there are 3 such processes running
[2026-03-06 05:32:54] 2026-03-06 10:32:54,750 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 05:32:54] 2026-03-06 10:32:54,750 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 05:32:54] 2026-03-06 10:32:54,750 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 05:32:54] 2026-03-06 10:32:54,750 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 05:32:54] 2026-03-06 10:32:54,750 | INFO     | [monitor] control thread has ended
[2026-03-06 05:32:54] 2026-03-06 10:32:54,825 [wrapper] ==== pilot stdout END ====
[2026-03-06 05:32:54] 2026-03-06 10:32:54,827 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 05:32:54] 2026-03-06 10:32:54,829 [wrapper] pilotpid: 2331402
[2026-03-06 05:32:54] 2026-03-06 10:32:54,831 [wrapper] Pilot exit status: 0
[2026-03-06 05:32:54] 2026-03-06 10:32:54,836 [wrapper] pandaids: 7042830449
[2026-03-06 05:32:54] 2026-03-06 10:32:54,857 [wrapper] cleanup supervisor_pilot 2401747 2331403
[2026-03-06 05:32:54] 2026-03-06 10:32:54,859 [wrapper] Test setup, not cleaning
[2026-03-06 05:32:54] 2026-03-06 10:32:54,861 [wrapper] apfmon messages muted
[2026-03-06 05:32:54] 2026-03-06 10:32:54,863 [wrapper] ==== wrapper stdout END ====
[2026-03-06 05:32:54] 2026-03-06 10:32:54,864 [wrapper] ==== wrapper stderr END ====
[2026-03-06 05:32:54]  *** Error codes and diagnostics ***
[2026-03-06 05:32:54]     "exeErrorCode": 0,
[2026-03-06 05:32:54]     "exeErrorDiag": "",
[2026-03-06 05:32:54]     "pilotErrorCode": 0,
[2026-03-06 05:32:54]     "pilotErrorDiag": "",
[2026-03-06 05:32:54]  *** Listing of results directory ***
[2026-03-06 05:32:54] total 448760
[2026-03-06 05:32:54] -rw-r--r--. 1 boincer umatlas    584627 Mar  5 22:41 pilot3.tar.gz
[2026-03-06 05:32:54] -rwx------. 1 boincer umatlas     36322 Mar  5 22:46 runpilot2-wrapper.sh
[2026-03-06 05:32:54] -rw-r--r--. 1 boincer umatlas      5111 Mar  5 22:46 queuedata.json
[2026-03-06 05:32:54] -rw-r--r--. 1 boincer umatlas       100 Mar  6 03:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 05:32:54] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  6 03:58 run_atlas
[2026-03-06 05:32:54] -rw-r--r--. 1 boincer umatlas       105 Mar  6 03:58 job.xml
[2026-03-06 05:32:54] -rw-r--r--. 2 boincer umatlas 267965175 Mar  6 03:58 EVNT.48958633._000036.pool.root.1
[2026-03-06 05:32:54] -rw-r--r--. 2 boincer umatlas     15845 Mar  6 03:58 start_atlas.sh
[2026-03-06 05:32:54] drwxrwx--x. 2 boincer umatlas      4096 Mar  6 03:58 shared
[2026-03-06 05:32:54] -rw-r--r--. 2 boincer umatlas    597927 Mar  6 03:58 input.tar.gz
[2026-03-06 05:32:54] -rw-r--r--. 1 boincer umatlas         0 Mar  6 03:58 boinc_lockfile
[2026-03-06 05:32:54] -rw-r--r--. 1 boincer umatlas      2525 Mar  6 03:58 pandaJob.out
[2026-03-06 05:32:54] -rw-------. 1 boincer umatlas    998145 Mar  6 03:58 agis_schedconf.cvmfs.json
[2026-03-06 05:32:54] -rw-------. 1 boincer umatlas   1521291 Mar  6 03:58 agis_ddmendpoints.agis.ALL.json
[2026-03-06 05:32:54] -rw-------. 1 boincer umatlas       435 Mar  6 03:58 workernode_map.json
[2026-03-06 05:32:54] drwx------. 5 boincer umatlas      4096 Mar  6 03:58 pilot3
[2026-03-06 05:32:54] -rw-r--r--. 1 boincer umatlas      6531 Mar  6 05:30 init_data.xml
[2026-03-06 05:32:54] -rw-------. 1 boincer umatlas 185229777 Mar  6 05:31 HITS.48958635._000798.pool.root.1
[2026-03-06 05:32:54] -rw-r--r--. 1 boincer umatlas       529 Mar  6 05:31 boinc_task_state.xml
[2026-03-06 05:32:54] -rw-------. 1 boincer umatlas      1044 Mar  6 05:32 memory_monitor_summary.json
[2026-03-06 05:32:54] -rw-------. 1 boincer umatlas    369427 Mar  6 05:32 log.48958635._000798.job.log.tgz.1
[2026-03-06 05:32:54] -rw-------. 1 boincer umatlas      6364 Mar  6 05:32 heartbeat.json
[2026-03-06 05:32:54] -rw-r--r--. 1 boincer umatlas      8192 Mar  6 05:32 boinc_mmap_file
[2026-03-06 05:32:54] -rw-r--r--. 1 boincer umatlas        27 Mar  6 05:32 wrapper_checkpoint.txt
[2026-03-06 05:32:54] -rw-------. 1 boincer umatlas        95 Mar  6 05:32 pilot_heartbeat.json
[2026-03-06 05:32:54] -rw-------. 1 boincer umatlas       822 Mar  6 05:32 pilotlog.txt
[2026-03-06 05:32:54] -rw-------. 1 boincer umatlas    830477 Mar  6 05:32 log.48958635._000798.job.log.1
[2026-03-06 05:32:54] -rw-------. 1 boincer umatlas       357 Mar  6 05:32 output.list
[2026-03-06 05:32:54] -rw-r--r--. 1 boincer umatlas       620 Mar  6 05:32 runtime_log
[2026-03-06 05:32:54] -rw-------. 1 boincer umatlas   1218560 Mar  6 05:32 result.tar.gz
[2026-03-06 05:32:54] -rw-------. 1 boincer umatlas       650 Mar  6 05:32 W9XLDmhJbI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmQyNLDmIwPYum.diag
[2026-03-06 05:32:54] -rw-r--r--. 1 boincer umatlas      8816 Mar  6 05:32 runtime_log.err
[2026-03-06 05:32:54] -rw-r--r--. 1 boincer umatlas     22054 Mar  6 05:32 stderr.txt
[2026-03-06 05:32:54] HITS file was successfully produced:
[2026-03-06 05:32:54] -rw-------. 1 boincer umatlas 185229777 Mar  6 05:31 shared/HITS.pool.root.1
[2026-03-06 05:32:54]  *** Contents of shared directory: ***
[2026-03-06 05:32:54] total 444376
[2026-03-06 05:32:54] -rw-r--r--. 2 boincer umatlas 267965175 Mar  6 03:58 ATLAS.root_0
[2026-03-06 05:32:54] -rw-r--r--. 2 boincer umatlas     15845 Mar  6 03:58 start_atlas.sh
[2026-03-06 05:32:54] -rw-r--r--. 2 boincer umatlas    597927 Mar  6 03:58 input.tar.gz
[2026-03-06 05:32:54] -rw-------. 1 boincer umatlas 185229777 Mar  6 05:31 HITS.pool.root.1
[2026-03-06 05:32:54] -rw-------. 1 boincer umatlas   1218560 Mar  6 05:32 result.tar.gz
05:32:56 (2327709): run_atlas exited; CPU time 47226.942302
05:32:56 (2327709): called boinc_finish(0)

</stderr_txt>
]]>

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