Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-06 07:09:26 (17292): vboxwrapper version 26210
2026-03-06 07:09:26 (17292): BOINC client version: 8.0.2
2026-03-06 07:09:27 (17292): Detected: VirtualBox VboxManage Interface (Version: 6.1.14)
2026-03-06 07:09:27 (17292): Successfully copied 'init_data.xml' to the shared directory.
2026-03-06 07:09:28 (17292): Create VM. (boinc_8d4abf677f89792e, slot#0)
2026-03-06 07:09:28 (17292): Setting Memory Size for VM. (4800MB)
2026-03-06 07:09:29 (17292): Setting CPU Count for VM. (8)
2026-03-06 07:09:29 (17292): Setting Chipset Options for VM.
2026-03-06 07:09:29 (17292): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-06 07:09:29 (17292): Setting Boot Options for VM.
2026-03-06 07:09:30 (17292): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-06 07:09:30 (17292): Enabling VM Network Access.
2026-03-06 07:09:31 (17292): Disabling USB Support for VM.
2026-03-06 07:09:31 (17292): Disabling COM Port Support for VM.
2026-03-06 07:09:31 (17292): Disabling LPT Port Support for VM.
2026-03-06 07:09:32 (17292): Disabling Audio Support for VM.
2026-03-06 07:09:32 (17292): Disabling Clipboard Support for VM.
2026-03-06 07:09:32 (17292): Disabling Drag and Drop Support for VM.
2026-03-06 07:09:33 (17292): Adding storage controller(s) to VM.
2026-03-06 07:09:33 (17292): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-06 07:09:34 (17292): Adding VirtualBox Guest Additions to VM.
2026-03-06 07:09:34 (17292): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-06 07:09:35 (17292): forwarding host port 50442 to guest port 80
2026-03-06 07:09:35 (17292): Enabling remote desktop for VM.
2026-03-06 07:09:35 (17292): Enabling shared directory for VM.
2026-03-06 07:09:36 (17292): Starting VM using VBoxManage interface. (boinc_8d4abf677f89792e, slot#0)
2026-03-06 07:09:40 (17292): Successfully started VM. (PID = '17068')
2026-03-06 07:09:40 (17292): Reporting VM Process ID to BOINC.
2026-03-06 07:09:40 (17292): Guest Log: BIOS: VirtualBox 6.1.14
2026-03-06 07:09:40 (17292): Guest Log: CPUID EDX: 0x178bfbff
2026-03-06 07:09:40 (17292): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-06 07:09:40 (17292): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-06 07:09:40 (17292): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-06 07:09:40 (17292): Detected: Web Application Enabled (http://localhost:50442)
2026-03-06 07:09:40 (17292): Detected: Remote Desktop Enabled (localhost:50443)
2026-03-06 07:09:40 (17292): Preference change detected
2026-03-06 07:09:40 (17292): Setting CPU throttle for VM. (90%)
2026-03-06 07:09:40 (17292): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-06 07:09:42 (17292): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-06 07:09:42 (17292): Guest Log: BIOS: Booting from Hard Disk...
2026-03-06 07:09:45 (17292): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-06 07:09:45 (17292): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-06 07:09:45 (17292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-06 07:09:55 (17292): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-06 07:09:55 (17292): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-06 07:10:08 (17292): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-06 07:10:08 (17292): Guest Log: 00:00:00.000119 main     Log opened 2026-03-06T07:10:06.448285000Z
2026-03-06 07:10:08 (17292): Guest Log: 00:00:00.000199 main     OS Product: Linux
2026-03-06 07:10:08 (17292): Guest Log: 00:00:00.000228 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-06 07:10:08 (17292): Guest Log: 00:00:00.000251 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-06 07:10:08 (17292): Guest Log: 00:00:00.000274 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-06 07:10:08 (17292): Guest Log: 00:00:00.000274 main     Process ID: 1388
2026-03-06 07:10:08 (17292): Guest Log: 00:00:00.000275 main     Package type: LINUX_64BITS_GENERIC
2026-03-06 07:10:08 (17292): Guest Log: 00:00:00.001866 main     5.2.32 r132073 started. Verbose level = 0
2026-03-06 07:10:08 (17292): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-06 07:10:08 (17292): Guest Log: [INFO] Mounting shared directory
2026-03-06 07:10:08 (17292): Guest Log: [INFO] Checking for init_data.xml
2026-03-06 07:10:14 (17292): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-06 07:10:14 (17292): Guest Log: [INFO] Detected branch: prod
2026-03-06 07:10:14 (17292): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-06 07:10:14 (17292): Guest Log: Copying input files
2026-03-06 07:10:18 (17292): Guest Log: 00:00:10.004664 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 079 240 000ns (GuestNow=1 772 809 817 530 494 000 ns GuestLast=1 772 781 006 451 254 000 ns fSetTimeLastLoop=true )
2026-03-06 07:10:19 (17292): Guest Log: Copied input files into RunAtlas.
2026-03-06 07:10:19 (17292): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-06 07:10:19 (17292): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-06 07:10:19 (17292): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-06 07:10:19 (17292): Guest Log: Further information can be found at the LHC@home message board.
2026-03-06 07:10:29 (17292): Preference change detected
2026-03-06 07:10:29 (17292): Setting CPU throttle for VM. (90%)
2026-03-06 07:10:29 (17292): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-06 07:10:31 (17292): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-06 07:10:32 (17292): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-06 07:10:32 (17292): Guest Log: 2.6.3.0 1670 0 32288 156960 4 1 3120742 4096001 0 65024 0 0 n/a 1336 1422 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-06 07:10:34 (17292): Guest Log: copied the webapp to /var/www
2026-03-06 07:10:34 (17292): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-06 07:10:34 (17292): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-06 07:10:34 (17292): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-06 07:10:34 (17292): Guest Log:  *** Starting ATLAS job. (PandaID=7038991229 taskID=48955006) ***
2026-03-06 07:51:59 (17292): Preference change detected
2026-03-06 07:51:59 (17292): Setting CPU throttle for VM. (90%)
2026-03-06 07:51:59 (17292): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-06 08:11:51 (17292): Preference change detected
2026-03-06 08:11:51 (17292): Setting CPU throttle for VM. (90%)
2026-03-06 08:11:52 (17292): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-06 08:11:58 (17292): Preference change detected
2026-03-06 08:11:58 (17292): Setting CPU throttle for VM. (90%)
2026-03-06 08:11:59 (17292): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-06 08:49:42 (17292): Status Report: Elapsed Time: '6000.000000'
2026-03-06 08:49:42 (17292): Status Report: CPU Time: '39196.421875'
2026-03-06 08:50:40 (17292): Guest Log:  *** Job finished ***
2026-03-06 08:50:40 (17292): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-06 08:50:40 (17292): Guest Log: 2026-03-06 16:50:33,152 | INFO     | found 0 job(s) in 20 queues
2026-03-06 08:50:40 (17292): Guest Log: 2026-03-06 16:50:33,153 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-06 08:50:40 (17292): Guest Log: 2026-03-06 16:50:33,153 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-06 08:50:40 (17292): Guest Log: 2026-03-06 16:50:34,097 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140039135373120)>', '<ExcThread(monitor, started 140038448854784)>']
2026-03-06 08:50:40 (17292): Guest Log: 2026-03-06 16:50:34,154 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-06 08:50:40 (17292): Guest Log: 2026-03-06 16:50:34,154 | INFO     | [monitor] control thread has ended
2026-03-06 08:50:40 (17292): Guest Log: 2026-03-06 16:50:39,107 | INFO     | all workflow threads have been joined
2026-03-06 08:50:40 (17292): Guest Log: 2026-03-06 16:50:39,107 | INFO     | end of generic workflow (traces error code: 0)
2026-03-06 08:50:40 (17292): Guest Log: 2026-03-06 16:50:39,107 | INFO     | traces error code: 0
2026-03-06 08:50:40 (17292): Guest Log: 2026-03-06 16:50:39,107 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-06 08:50:40 (17292): Guest Log: 2026-03-06 16:50:39,190 [wrapper] ==== pilot stdout END ====
2026-03-06 08:50:40 (17292): Guest Log: 2026-03-06 16:50:39,194 [wrapper] ==== wrapper stdout RESUME ====
2026-03-06 08:50:40 (17292): Guest Log: 2026-03-06 16:50:39,198 [wrapper] pilotpid: 6103
2026-03-06 08:50:40 (17292): Guest Log: 2026-03-06 16:50:39,202 [wrapper] Pilot exit status: 0
2026-03-06 08:50:40 (17292): Guest Log: 2026-03-06 16:50:39,256 [wrapper] pandaids: 7038991229
2026-03-06 08:50:40 (17292): Guest Log: 2026-03-06 16:50:39,283 [wrapper] cleanup supervisor_pilot 25858 6104
2026-03-06 08:50:40 (17292): Guest Log: 2026-03-06 16:50:39,287 [wrapper] Test setup, not cleaning
2026-03-06 08:50:40 (17292): Guest Log: 2026-03-06 16:50:39,290 [wrapper] apfmon messages muted
2026-03-06 08:50:40 (17292): Guest Log: 2026-03-06 16:50:39,294 [wrapper] ==== wrapper stdout END ====
2026-03-06 08:50:40 (17292): Guest Log: 2026-03-06 16:50:39,298 [wrapper] ==== wrapper stderr END ====
2026-03-06 08:50:40 (17292): Guest Log:  *** Error codes and diagnostics ***
2026-03-06 08:50:40 (17292): Guest Log:     "exeErrorCode": 0,
2026-03-06 08:50:40 (17292): Guest Log:     "exeErrorDiag": "",
2026-03-06 08:50:40 (17292): Guest Log:     "pilotErrorCode": 0,
2026-03-06 08:50:40 (17292): Guest Log:     "pilotErrorDiag": "",
2026-03-06 08:50:40 (17292): Guest Log:  *** Listing of results directory ***
2026-03-06 08:50:40 (17292): Guest Log: total 184040
2026-03-06 08:50:40 (17292): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  6 06:22 pilot3.tar.gz
2026-03-06 08:50:40 (17292): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  6 06:26 runpilot2-wrapper.sh
2026-03-06 08:50:40 (17292): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  6 06:26 queuedata.json
2026-03-06 08:50:40 (17292): Guest Log: -rwxr-xr-x. 1 atlas atlas      9121 Mar  6 15:10 init_data.xml
2026-03-06 08:50:40 (17292): Guest Log: -rwxr-xr-x. 1 atlas atlas    597955 Mar  6 15:10 input.tar.gz
2026-03-06 08:50:40 (17292): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  6 15:10 start_atlas.sh
2026-03-06 08:50:40 (17292): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  6 15:10 EVNT.46701403._000288.pool.root.1 -> /data/./ATLAS.root_0
2026-03-06 08:50:40 (17292): Guest Log: -rw-r--r--. 1 atlas atlas      2563 Mar  6 15:10 pandaJob.out
2026-03-06 08:50:40 (17292): Guest Log: -rw-------. 1 atlas atlas    998899 Mar  6 15:11 agis_schedconf.cvmfs.json
2026-03-06 08:50:40 (17292): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  6 15:11 agis_ddmendpoints.agis.ALL.json
2026-03-06 08:50:40 (17292): Guest Log: -rw-------. 1 atlas atlas       427 Mar  6 15:11 workernode_map.json
2026-03-06 08:50:40 (17292): Guest Log: drwx------. 5 atlas atlas      4096 Mar  6 15:11 pilot3
2026-03-06 08:50:40 (17292): Guest Log: -rw-------. 1 atlas atlas 182233412 Mar  6 16:49 HITS.48955006._014357.pool.root.1
2026-03-06 08:50:40 (17292): Guest Log: -rw-------. 1 atlas atlas      1030 Mar  6 16:49 memory_monitor_summary.json
2026-03-06 08:50:40 (17292): Guest Log: -rw-------. 1 atlas atlas    334154 Mar  6 16:49 log.48955006._014357.job.log.tgz.1
2026-03-06 08:50:40 (17292): Guest Log: -rw-------. 1 atlas atlas      6376 Mar  6 16:50 heartbeat.json
2026-03-06 08:50:40 (17292): Guest Log: -rw-------. 1 atlas atlas        95 Mar  6 16:50 pilot_heartbeat.json
2026-03-06 08:50:40 (17292): Guest Log: -rw-------. 1 atlas atlas      4873 Mar  6 16:50 pilotlog.txt
2026-03-06 08:50:40 (17292): Guest Log: -rw-------. 1 atlas atlas    843366 Mar  6 16:50 log.48955006._014357.job.log.1
2026-03-06 08:50:40 (17292): Guest Log: -rw-------. 1 atlas atlas       357 Mar  6 16:50 output.list
2026-03-06 08:50:40 (17292): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  6 16:50 runtime_log
2026-03-06 08:50:40 (17292): Guest Log: -rw-------. 1 atlas atlas   1198080 Mar  6 16:50 result.tar.gz
2026-03-06 08:50:40 (17292): Guest Log: -rw-r--r--. 1 atlas atlas      8733 Mar  6 16:50 runtime_log.err
2026-03-06 08:50:40 (17292): Guest Log: -rw-------. 1 atlas atlas       647 Mar  6 16:50 0OIMDmeodI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmTfQLDmhqtdQo.diag
2026-03-06 08:50:40 (17292): Guest Log: Looking for outputfile HITS.48955006._014357.pool.root.1
2026-03-06 08:50:40 (17292): Guest Log: HITS file was successfully produced
2026-03-06 08:50:40 (17292): Guest Log: -rw-------. 1 atlas atlas 182233412 Mar  6 16:49 /home/atlas/RunAtlas/HITS.48955006._014357.pool.root.1
2026-03-06 08:50:41 (17292): Guest Log: Successfully finished the ATLAS job!
2026-03-06 08:50:41 (17292): Guest Log: Copying the results back to the shared directory!
2026-03-06 08:50:41 (17292): Guest Log:  *** Contents of shared directory: ***
2026-03-06 08:50:41 (17292): Guest Log: total 611856
2026-03-06 08:50:41 (17292): Guest Log: -rwxrwxrwx. 1 root root 442474703 Mar  6 15:09 ATLAS.root_0
2026-03-06 08:50:41 (17292): Guest Log: -rwxrwxrwx. 1 root root 182233412 Mar  6 16:50 HITS.pool.root.1
2026-03-06 08:50:41 (17292): Guest Log: -rwxrwxrwx. 1 root root      9121 Mar  6 15:09 init_data.xml
2026-03-06 08:50:41 (17292): Guest Log: -rwxrwxrwx. 1 root root    597955 Mar  6 08:54 input.tar.gz
2026-03-06 08:50:41 (17292): Guest Log: -rwxrwxrwx. 1 root root   1198080 Mar  6 16:50 result.tar.gz
2026-03-06 08:50:41 (17292): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  6 08:54 start_atlas.sh
2026-03-06 08:50:41 (17292): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-06 08:50:41 (17292): VM Completion File Detected.
2026-03-06 08:50:41 (17292): Powering off VM.
2026-03-06 08:50:42 (17292): Successfully stopped VM.
2026-03-06 08:50:42 (17292): Deregistering VM. (boinc_8d4abf677f89792e, slot#0)
2026-03-06 08:50:42 (17292): Removing network bandwidth throttle group from VM.
2026-03-06 08:50:42 (17292): Removing VM from VirtualBox.
2026-03-06 08:50:47 (17292): called boinc_finish(0)

</stderr_txt>
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