Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-06 05:26:07 (15404): vboxwrapper version 26210
2026-03-06 05:26:07 (15404): BOINC client version: 8.0.2
2026-03-06 05:26:07 (15404): Detected: VirtualBox VboxManage Interface (Version: 6.1.14)
2026-03-06 05:26:08 (15404): Successfully copied 'init_data.xml' to the shared directory.
2026-03-06 05:26:08 (15404): Create VM. (boinc_69f1a48a298e3e6b, slot#0)
2026-03-06 05:26:08 (15404): Setting Memory Size for VM. (4800MB)
2026-03-06 05:26:09 (15404): Setting CPU Count for VM. (8)
2026-03-06 05:26:09 (15404): Setting Chipset Options for VM.
2026-03-06 05:26:10 (15404): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-06 05:26:10 (15404): Setting Boot Options for VM.
2026-03-06 05:26:10 (15404): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-06 05:26:11 (15404): Enabling VM Network Access.
2026-03-06 05:26:11 (15404): Disabling USB Support for VM.
2026-03-06 05:26:11 (15404): Disabling COM Port Support for VM.
2026-03-06 05:26:12 (15404): Disabling LPT Port Support for VM.
2026-03-06 05:26:12 (15404): Disabling Audio Support for VM.
2026-03-06 05:26:12 (15404): Disabling Clipboard Support for VM.
2026-03-06 05:26:12 (15404): Disabling Drag and Drop Support for VM.
2026-03-06 05:26:13 (15404): Adding storage controller(s) to VM.
2026-03-06 05:26:13 (15404): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-06 05:26:14 (15404): Adding VirtualBox Guest Additions to VM.
2026-03-06 05:26:14 (15404): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-06 05:26:14 (15404): forwarding host port 50064 to guest port 80
2026-03-06 05:26:15 (15404): Enabling remote desktop for VM.
2026-03-06 05:26:15 (15404): Enabling shared directory for VM.
2026-03-06 05:26:16 (15404): Starting VM using VBoxManage interface. (boinc_69f1a48a298e3e6b, slot#0)
2026-03-06 05:26:19 (15404): Successfully started VM. (PID = '4388')
2026-03-06 05:26:19 (15404): Reporting VM Process ID to BOINC.
2026-03-06 05:26:19 (15404): Guest Log: BIOS: VirtualBox 6.1.14
2026-03-06 05:26:19 (15404): Guest Log: CPUID EDX: 0x178bfbff
2026-03-06 05:26:19 (15404): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-06 05:26:19 (15404): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-06 05:26:19 (15404): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-06 05:26:19 (15404): Detected: Web Application Enabled (http://localhost:50064)
2026-03-06 05:26:19 (15404): Detected: Remote Desktop Enabled (localhost:50065)
2026-03-06 05:26:19 (15404): Preference change detected
2026-03-06 05:26:19 (15404): Setting CPU throttle for VM. (90%)
2026-03-06 05:26:20 (15404): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-06 05:26:21 (15404): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-06 05:26:21 (15404): Guest Log: BIOS: Booting from Hard Disk...
2026-03-06 05:26:24 (15404): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-06 05:26:24 (15404): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-06 05:26:24 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-06 05:26:34 (15404): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-06 05:26:34 (15404): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-06 05:26:46 (15404): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-06 05:26:46 (15404): Guest Log: 00:00:00.002843 main     Log opened 2026-03-06T05:26:44.542791000Z
2026-03-06 05:26:46 (15404): Guest Log: 00:00:00.003731 main     OS Product: Linux
2026-03-06 05:26:46 (15404): Guest Log: 00:00:00.003947 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-06 05:26:46 (15404): Guest Log: 00:00:00.004385 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-06 05:26:46 (15404): Guest Log: 00:00:00.004631 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-06 05:26:46 (15404): Guest Log: 00:00:00.004690 main     Process ID: 1369
2026-03-06 05:26:46 (15404): Guest Log: 00:00:00.004716 main     Package type: LINUX_64BITS_GENERIC
2026-03-06 05:26:46 (15404): Guest Log: 00:00:00.010924 main     5.2.32 r132073 started. Verbose level = 0
2026-03-06 05:26:46 (15404): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-06 05:26:46 (15404): Guest Log: [INFO] Mounting shared directory
2026-03-06 05:26:46 (15404): Guest Log: [INFO] Checking for init_data.xml
2026-03-06 05:26:50 (15404): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-06 05:26:50 (15404): Guest Log: [INFO] Detected branch: prod
2026-03-06 05:26:50 (15404): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-06 05:26:50 (15404): Guest Log: Copying input files
2026-03-06 05:26:55 (15404): Guest Log: Copied input files into RunAtlas.
2026-03-06 05:26:55 (15404): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-06 05:26:55 (15404): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-06 05:26:55 (15404): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-06 05:26:55 (15404): Guest Log: Further information can be found at the LHC@home message board.
2026-03-06 05:26:56 (15404): Guest Log: 00:00:10.026867 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 812 008 234 000ns (GuestNow=1 772 803 616 562 201 000 ns GuestLast=1 772 774 804 553 967 000 ns fSetTimeLastLoop=true )
2026-03-06 05:27:06 (15404): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-06 05:27:06 (15404): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-06 05:27:06 (15404): Guest Log: 2.6.3.0 1647 0 32036 156958 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-06 05:27:09 (15404): Guest Log: copied the webapp to /var/www
2026-03-06 05:27:09 (15404): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-06 05:27:09 (15404): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-06 05:27:09 (15404): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-06 05:27:09 (15404): Guest Log:  *** Starting ATLAS job. (PandaID=7038991569 taskID=48955006) ***
2026-03-06 05:45:10 (15404): Preference change detected
2026-03-06 05:45:10 (15404): Setting CPU throttle for VM. (90%)
2026-03-06 05:45:10 (15404): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-06 06:00:39 (15404): Preference change detected
2026-03-06 06:00:39 (15404): Setting CPU throttle for VM. (90%)
2026-03-06 06:00:40 (15404): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-06 06:31:02 (15404): Preference change detected
2026-03-06 06:31:02 (15404): Setting CPU throttle for VM. (90%)
2026-03-06 06:31:02 (15404): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-06 06:48:49 (15404): Preference change detected
2026-03-06 06:48:49 (15404): Setting CPU throttle for VM. (90%)
2026-03-06 06:48:50 (15404): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-06 07:06:22 (15404): Status Report: Elapsed Time: '6000.000000'
2026-03-06 07:06:22 (15404): Status Report: CPU Time: '39574.953125'
2026-03-06 07:09:15 (15404): Guest Log:  *** Job finished ***
2026-03-06 07:09:15 (15404): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-06 07:09:15 (15404): Guest Log: 2026-03-06 15:08:47,803 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-06 07:09:15 (15404): Guest Log: 2026-03-06 15:08:47,803 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-06 07:09:15 (15404): Guest Log: 2026-03-06 15:09:06,871 | INFO     | [monitor] cgroup control has ended
2026-03-06 07:09:15 (15404): Guest Log: 2026-03-06 15:09:08,008 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140467293693760)>', '<ExcThread(monitor, started 140466536298240)>']
2026-03-06 07:09:15 (15404): Guest Log: 2026-03-06 15:09:08,875 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-06 07:09:15 (15404): Guest Log: 2026-03-06 15:09:08,876 | INFO     | [monitor] control thread has ended
2026-03-06 07:09:15 (15404): Guest Log: 2026-03-06 15:09:13,072 | INFO     | all workflow threads have been joined
2026-03-06 07:09:15 (15404): Guest Log: 2026-03-06 15:09:13,073 | INFO     | end of generic workflow (traces error code: 0)
2026-03-06 07:09:15 (15404): Guest Log: 2026-03-06 15:09:13,074 | INFO     | traces error code: 0
2026-03-06 07:09:15 (15404): Guest Log: 2026-03-06 15:09:13,074 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-06 07:09:15 (15404): Guest Log: 2026-03-06 15:09:13,208 [wrapper] ==== pilot stdout END ====
2026-03-06 07:09:15 (15404): Guest Log: 2026-03-06 15:09:13,213 [wrapper] ==== wrapper stdout RESUME ====
2026-03-06 07:09:15 (15404): Guest Log: 2026-03-06 15:09:13,218 [wrapper] pilotpid: 6076
2026-03-06 07:09:15 (15404): Guest Log: 2026-03-06 15:09:13,222 [wrapper] Pilot exit status: 0
2026-03-06 07:09:15 (15404): Guest Log: 2026-03-06 15:09:13,299 [wrapper] pandaids: 7038991569
2026-03-06 07:09:15 (15404): Guest Log: 2026-03-06 15:09:13,382 [wrapper] cleanup supervisor_pilot 25805 6077
2026-03-06 07:09:15 (15404): Guest Log: 2026-03-06 15:09:13,391 [wrapper] Test setup, not cleaning
2026-03-06 07:09:15 (15404): Guest Log: 2026-03-06 15:09:13,397 [wrapper] apfmon messages muted
2026-03-06 07:09:15 (15404): Guest Log: 2026-03-06 15:09:13,401 [wrapper] ==== wrapper stdout END ====
2026-03-06 07:09:15 (15404): Guest Log: 2026-03-06 15:09:13,406 [wrapper] ==== wrapper stderr END ====
2026-03-06 07:09:15 (15404): Guest Log:  *** Error codes and diagnostics ***
2026-03-06 07:09:15 (15404): Guest Log:     "exeErrorCode": 0,
2026-03-06 07:09:15 (15404): Guest Log:     "exeErrorDiag": "",
2026-03-06 07:09:15 (15404): Guest Log:     "pilotErrorCode": 0,
2026-03-06 07:09:15 (15404): Guest Log:     "pilotErrorDiag": "",
2026-03-06 07:09:15 (15404): Guest Log:  *** Listing of results directory ***
2026-03-06 07:09:15 (15404): Guest Log: total 187388
2026-03-06 07:09:15 (15404): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  6 06:22 pilot3.tar.gz
2026-03-06 07:09:15 (15404): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  6 06:26 runpilot2-wrapper.sh
2026-03-06 07:09:15 (15404): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  6 06:26 queuedata.json
2026-03-06 07:09:15 (15404): Guest Log: -rwxr-xr-x. 1 atlas atlas      9136 Mar  6 13:26 init_data.xml
2026-03-06 07:09:15 (15404): Guest Log: -rwxr-xr-x. 1 atlas atlas    597950 Mar  6 13:26 input.tar.gz
2026-03-06 07:09:15 (15404): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  6 13:26 start_atlas.sh
2026-03-06 07:09:15 (15404): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  6 13:26 EVNT.46701403._000290.pool.root.1 -> /data/./ATLAS.root_0
2026-03-06 07:09:15 (15404): Guest Log: -rw-r--r--. 1 atlas atlas      2563 Mar  6 13:27 pandaJob.out
2026-03-06 07:09:15 (15404): Guest Log: -rw-------. 1 atlas atlas    998883 Mar  6 13:27 agis_schedconf.cvmfs.json
2026-03-06 07:09:15 (15404): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  6 13:27 agis_ddmendpoints.agis.ALL.json
2026-03-06 07:09:15 (15404): Guest Log: -rw-------. 1 atlas atlas       427 Mar  6 13:27 workernode_map.json
2026-03-06 07:09:15 (15404): Guest Log: drwx------. 5 atlas atlas      4096 Mar  6 13:28 pilot3
2026-03-06 07:09:15 (15404): Guest Log: -rw-------. 1 atlas atlas 185637852 Mar  6 15:07 HITS.48955006._014457.pool.root.1
2026-03-06 07:09:15 (15404): Guest Log: -rw-------. 1 atlas atlas        95 Mar  6 15:07 pilot_heartbeat.json
2026-03-06 07:09:15 (15404): Guest Log: -rw-------. 1 atlas atlas      1029 Mar  6 15:08 memory_monitor_summary.json
2026-03-06 07:09:15 (15404): Guest Log: -rw-------. 1 atlas atlas    337899 Mar  6 15:08 log.48955006._014457.job.log.tgz.1
2026-03-06 07:09:15 (15404): Guest Log: -rw-------. 1 atlas atlas      6377 Mar  6 15:08 heartbeat.json
2026-03-06 07:09:15 (15404): Guest Log: -rw-------. 1 atlas atlas      4801 Mar  6 15:09 pilotlog.txt
2026-03-06 07:09:15 (15404): Guest Log: -rw-------. 1 atlas atlas    854437 Mar  6 15:09 log.48955006._014457.job.log.1
2026-03-06 07:09:15 (15404): Guest Log: -rw-------. 1 atlas atlas       357 Mar  6 15:09 output.list
2026-03-06 07:09:15 (15404): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  6 15:09 runtime_log
2026-03-06 07:09:15 (15404): Guest Log: -rw-------. 1 atlas atlas   1208320 Mar  6 15:09 result.tar.gz
2026-03-06 07:09:15 (15404): Guest Log: -rw-r--r--. 1 atlas atlas      8733 Mar  6 15:09 runtime_log.err
2026-03-06 07:09:15 (15404): Guest Log: -rw-------. 1 atlas atlas       647 Mar  6 15:09 aAZLDmlodI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmHYOLDmxNcvOn.diag
2026-03-06 07:09:15 (15404): Guest Log: Looking for outputfile HITS.48955006._014457.pool.root.1
2026-03-06 07:09:15 (15404): Guest Log: HITS file was successfully produced
2026-03-06 07:09:15 (15404): Guest Log: -rw-------. 1 atlas atlas 185637852 Mar  6 15:07 /home/atlas/RunAtlas/HITS.48955006._014457.pool.root.1
2026-03-06 07:09:16 (15404): Guest Log: Successfully finished the ATLAS job!
2026-03-06 07:09:16 (15404): Guest Log: Copying the results back to the shared directory!
2026-03-06 07:09:16 (15404): Guest Log:  *** Contents of shared directory: ***
2026-03-06 07:09:16 (15404): Guest Log: total 614500
2026-03-06 07:09:16 (15404): Guest Log: -rwxrwxrwx. 1 root root 441771316 Mar  6 13:26 ATLAS.root_0
2026-03-06 07:09:16 (15404): Guest Log: -rwxrwxrwx. 1 root root 185637852 Mar  6 15:09 HITS.pool.root.1
2026-03-06 07:09:16 (15404): Guest Log: -rwxrwxrwx. 1 root root      9136 Mar  6 13:26 init_data.xml
2026-03-06 07:09:16 (15404): Guest Log: -rwxrwxrwx. 1 root root    597950 Mar  6 08:53 input.tar.gz
2026-03-06 07:09:16 (15404): Guest Log: -rwxrwxrwx. 1 root root   1208320 Mar  6 15:09 result.tar.gz
2026-03-06 07:09:16 (15404): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  6 08:53 start_atlas.sh
2026-03-06 07:09:16 (15404): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-06 07:09:16 (15404): VM Completion File Detected.
2026-03-06 07:09:16 (15404): Powering off VM.
2026-03-06 07:09:17 (15404): Successfully stopped VM.
2026-03-06 07:09:17 (15404): Deregistering VM. (boinc_69f1a48a298e3e6b, slot#0)
2026-03-06 07:09:17 (15404): Removing network bandwidth throttle group from VM.
2026-03-06 07:09:17 (15404): Removing VM from VirtualBox.
2026-03-06 07:09:22 (15404): called boinc_finish(0)

</stderr_txt>
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