Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:26:46 (336826): wrapper (7.7.26015): starting
23:26:46 (336826): wrapper: running run_atlas (--nthreads 4)
[2026-03-06 23:26:46] Arguments: --nthreads 4
[2026-03-06 23:26:46] Threads: 4
[2026-03-06 23:26:46] Checking for CVMFS
[2026-03-06 23:26:46] No cvmfs_config command found, will try listing directly
[2026-03-06 23:26:46] CVMFS is ok
[2026-03-06 23:26:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 23:26:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 23:26:46] Further information can be found at the LHC@home message board.
[2026-03-06 23:26:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 23:26:46] Checking for apptainer binary...
[2026-03-06 23:26:46] which: no apptainer in ((null))
[2026-03-06 23:26:46] apptainer is not installed, using version from CVMFS
[2026-03-06 23:26:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 23:26:46] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-03-06 23:26:46] apptainer works
[2026-03-06 23:26:46] Set ATHENA_PROC_NUMBER=4
[2026-03-06 23:26:46] Set ATHENA_CORE_NUMBER=4
[2026-03-06 23:26:46] Starting ATLAS job with PandaID=7042918549
[2026-03-06 23:26:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 06:47:53]  *** The last 200 lines of the pilot log: ***
[2026-03-07 06:47:53] 2026-03-07 05:47:11,967 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 06:47:53] 2026-03-07 05:47:11,974 | INFO     | fitting pss+swap vs Time
[2026-03-07 06:47:53] 2026-03-07 05:47:11,975 | INFO     | sum of square deviations: 25173279432.0
[2026-03-07 06:47:53] 2026-03-07 05:47:11,980 | INFO     | sum of deviations: 84799383508.0
[2026-03-07 06:47:53] 2026-03-07 05:47:11,980 | INFO     | mean x: 1772849221.0
[2026-03-07 06:47:53] 2026-03-07 05:47:11,980 | INFO     | mean y: 2334900.794457275
[2026-03-07 06:47:53] 2026-03-07 05:47:11,980 | INFO     | intersect: -5969732481.190422
[2026-03-07 06:47:53] 2026-03-07 05:47:11,981 | INFO     | chi2: 2.202509445646525
[2026-03-07 06:47:53] 2026-03-07 05:47:11,982 | INFO     | sum of square deviations: 24311253967.0
[2026-03-07 06:47:53] 2026-03-07 05:47:11,986 | INFO     | sum of deviations: 110822763484.5
[2026-03-07 06:47:53] 2026-03-07 05:47:11,986 | INFO     | mean x: 1772849068.5
[2026-03-07 06:47:53] 2026-03-07 05:47:11,986 | INFO     | mean y: 2339459.3855140186
[2026-03-07 06:47:53] 2026-03-07 05:47:11,987 | INFO     | intersect: -8079186622.271236
[2026-03-07 06:47:53] 2026-03-07 05:47:11,987 | INFO     | chi2: 1.4149852681688277
[2026-03-07 06:47:53] 2026-03-07 05:47:11,987 | INFO     | current chi2=1.4149852681688277 (change=35.755768450133814 %)
[2026-03-07 06:47:53] 2026-03-07 05:47:11,988 | INFO     | sum of square deviations: 23469135852.0
[2026-03-07 06:47:53] 2026-03-07 05:47:11,993 | INFO     | sum of deviations: 109077162688.00003
[2026-03-07 06:47:53] 2026-03-07 05:47:11,993 | INFO     | mean x: 1772848916.0
[2026-03-07 06:47:53] 2026-03-07 05:47:11,993 | INFO     | mean y: 2339143.257683215
[2026-03-07 06:47:53] 2026-03-07 05:47:11,993 | INFO     | intersect: -8237305079.318038
[2026-03-07 06:47:53] 2026-03-07 05:47:11,994 | INFO     | chi2: 1.414879790615132
[2026-03-07 06:47:53] 2026-03-07 05:47:11,994 | INFO     | current chi2=1.414879790615132 (change=0.007454321685781389 %)
[2026-03-07 06:47:53] 2026-03-07 05:47:11,994 | INFO     | right removable region: 422
[2026-03-07 06:47:53] 2026-03-07 05:47:11,994 | INFO     | sum of square deviations: 24311253967.0
[2026-03-07 06:47:53] 2026-03-07 05:47:11,999 | INFO     | sum of deviations: 22650311044.5
[2026-03-07 06:47:53] 2026-03-07 05:47:11,999 | INFO     | mean x: 1772849373.5
[2026-03-07 06:47:53] 2026-03-07 05:47:11,999 | INFO     | mean y: 2345838.98364486
[2026-03-07 06:47:53] 2026-03-07 05:47:11,999 | INFO     | intersect: -1649382607.4111397
[2026-03-07 06:47:53] 2026-03-07 05:47:12,000 | INFO     | chi2: 0.822010683288439
[2026-03-07 06:47:53] 2026-03-07 05:47:12,000 | INFO     | current chi2=0.822010683288439 (change=62.678449124782496 %)
[2026-03-07 06:47:53] 2026-03-07 05:47:12,001 | INFO     | sum of square deviations: 23469135852.0
[2026-03-07 06:47:53] 2026-03-07 05:47:12,005 | INFO     | sum of deviations: 12214523550.999996
[2026-03-07 06:47:53] 2026-03-07 05:47:12,005 | INFO     | mean x: 1772849526.0
[2026-03-07 06:47:53] 2026-03-07 05:47:12,006 | INFO     | mean y: 2347728.716312057
[2026-03-07 06:47:53] 2026-03-07 05:47:12,006 | INFO     | intersect: -920332698.2181472
[2026-03-07 06:47:53] 2026-03-07 05:47:12,006 | INFO     | chi2: 0.803343650775334
[2026-03-07 06:47:53] 2026-03-07 05:47:12,006 | INFO     | current chi2=0.803343650775334 (change=2.270899015378711 %)
[2026-03-07 06:47:53] 2026-03-07 05:47:12,007 | INFO     | left removable region: 20
[2026-03-07 06:47:53] 2026-03-07 05:47:12,007 | INFO     | sum of square deviations: 20144379560.5
[2026-03-07 06:47:53] 2026-03-07 05:47:12,011 | INFO     | sum of deviations: 31312073205.500008
[2026-03-07 06:47:53] 2026-03-07 05:47:12,011 | INFO     | mean x: 1772849495.5
[2026-03-07 06:47:53] 2026-03-07 05:47:12,012 | INFO     | mean y: 2353556.3208955224
[2026-03-07 06:47:53] 2026-03-07 05:47:12,012 | INFO     | intersect: -2753332863.2439623
[2026-03-07 06:47:53] 2026-03-07 05:47:12,012 | INFO     | chi2: 0.002774344941578469
[2026-03-07 06:47:53] 2026-03-07 05:47:12,012 | INFO     | current memory leak: 1.55 B/s (using 402 data points, chi2=0.00)
[2026-03-07 06:47:53] 2026-03-07 05:47:12,013 | INFO     | could have reported an average CPU frequency of 2563 MHz (18 samples)
[2026-03-07 06:47:53] 2026-03-07 05:47:12,013 | INFO     | ..............................
[2026-03-07 06:47:53] 2026-03-07 05:47:12,014 | INFO     | . Timing measurements:
[2026-03-07 06:47:53] 2026-03-07 05:47:12,014 | INFO     | . get job = 0 s
[2026-03-07 06:47:53] 2026-03-07 05:47:12,014 | INFO     | . initial setup = 5 s
[2026-03-07 06:47:53] 2026-03-07 05:47:12,014 | INFO     | . payload setup = 6 s
[2026-03-07 06:47:53] 2026-03-07 05:47:12,014 | INFO     | . stage-in = 0 s
[2026-03-07 06:47:53] 2026-03-07 05:47:12,014 | INFO     | . payload execution = 26385 s
[2026-03-07 06:47:53] 2026-03-07 05:47:12,014 | INFO     | . stage-out = 1 s
[2026-03-07 06:47:53] 2026-03-07 05:47:12,014 | INFO     | . log creation = 0 s
[2026-03-07 06:47:53] 2026-03-07 05:47:12,014 | INFO     | ..............................
[2026-03-07 06:47:53] 2026-03-07 05:47:12,112 | INFO     | 
[2026-03-07 06:47:53] 2026-03-07 05:47:12,113 | INFO     | job summary report
[2026-03-07 06:47:53] 2026-03-07 05:47:12,113 | INFO     | --------------------------------------------------
[2026-03-07 06:47:53] 2026-03-07 05:47:12,113 | INFO     | PanDA job id: 7042918549
[2026-03-07 06:47:53] 2026-03-07 05:47:12,113 | INFO     | task id: 48966951
[2026-03-07 06:47:53] 2026-03-07 05:47:12,113 | INFO     | errors: (none)
[2026-03-07 06:47:53] 2026-03-07 05:47:12,113 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 06:47:53] 2026-03-07 05:47:12,113 | INFO     | pilot state: finished 
[2026-03-07 06:47:53] 2026-03-07 05:47:12,113 | INFO     | transexitcode: 0
[2026-03-07 06:47:53] 2026-03-07 05:47:12,113 | INFO     | exeerrorcode: 0
[2026-03-07 06:47:53] 2026-03-07 05:47:12,114 | INFO     | exeerrordiag: 
[2026-03-07 06:47:53] 2026-03-07 05:47:12,114 | INFO     | exitcode: 0
[2026-03-07 06:47:53] 2026-03-07 05:47:12,114 | INFO     | exitmsg: OK
[2026-03-07 06:47:53] 2026-03-07 05:47:12,114 | INFO     | cpuconsumptiontime: 100236 s
[2026-03-07 06:47:53] 2026-03-07 05:47:12,114 | INFO     | nevents: 400
[2026-03-07 06:47:53] 2026-03-07 05:47:12,114 | INFO     | neventsw: 0
[2026-03-07 06:47:53] 2026-03-07 05:47:12,114 | INFO     | pid: 345891
[2026-03-07 06:47:53] 2026-03-07 05:47:12,114 | INFO     | pgrp: 345891
[2026-03-07 06:47:53] 2026-03-07 05:47:12,114 | INFO     | corecount: 4
[2026-03-07 06:47:53] 2026-03-07 05:47:12,114 | INFO     | event service: False
[2026-03-07 06:47:53] 2026-03-07 05:47:12,115 | INFO     | sizes: {0: 2295301, 1: 2295818, 12: 2295818, 26395: 2332438, 26398: 2341652}
[2026-03-07 06:47:53] 2026-03-07 05:47:12,115 | INFO     | --------------------------------------------------
[2026-03-07 06:47:53] 2026-03-07 05:47:12,115 | INFO     | 
[2026-03-07 06:47:53] 2026-03-07 05:47:12,115 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot52/slots/0
[2026-03-07 06:47:53] 2026-03-07 05:47:12,143 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 06:47:53] 2026-03-07 05:47:12,144 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 06:47:53] 2026-03-07 05:47:12,144 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 06:47:53] 2026-03-07 05:47:12,144 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 06:47:53] 2026-03-07 05:47:12,144 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 06:47:53] 2026-03-07 05:47:12,144 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 06:47:53] 2026-03-07 05:47:12,144 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 06:47:53] 2026-03-07 05:47:12,145 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 06:47:53] 2026-03-07 05:47:12,145 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 06:47:53] 2026-03-07 05:47:12,145 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 06:47:53] 2026-03-07 05:47:12,145 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 06:47:53] 2026-03-07 05:47:12,145 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 06:47:53] 2026-03-07 05:47:12,145 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 06:47:53] 2026-03-07 05:47:12,145 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 06:47:53] 2026-03-07 05:47:12,145 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 06:47:53] 2026-03-07 05:47:12,145 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 06:47:53] 2026-03-07 05:47:12,145 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 06:47:53] 2026-03-07 05:47:12,146 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 06:47:53] 2026-03-07 05:47:12,146 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 06:47:53] 2026-03-07 05:47:12,146 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 06:47:53] 2026-03-07 05:47:12,146 | INFO     | job 7042918549 has completed (purged errors)
[2026-03-07 06:47:53] 2026-03-07 05:47:12,146 | INFO     | overall cleanup function is called
[2026-03-07 06:47:53] 2026-03-07 05:47:13,154 | INFO     | --- collectZombieJob: --- 10, [345891]
[2026-03-07 06:47:53] 2026-03-07 05:47:13,154 | INFO     | zombie collector waiting for pid 345891
[2026-03-07 06:47:53] 2026-03-07 05:47:13,154 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 06:47:53] 2026-03-07 05:47:13,154 | INFO     | collected zombie processes
[2026-03-07 06:47:53] 2026-03-07 05:47:13,154 | INFO     | will attempt to kill all subprocesses of pid=345891
[2026-03-07 06:47:53] 2026-03-07 05:47:13,478 | WARNING  | process 345891 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 06:47:53] 2026-03-07 05:47:14,274 | INFO     | using path: /var/lib/boinc/var/slot52/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 06:47:53] 2026-03-07 05:47:14,275 | INFO     | using path: /var/lib/boinc/var/slot52/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 06:47:53] 2026-03-07 05:47:14,276 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-07 06:47:53] 2026-03-07 05:47:14,276 | WARNING  | maxPSS not found in memory monitor output
[2026-03-07 06:47:53] 2026-03-07 05:47:14,362 | INFO     | process IDs to be killed: [345891] (in reverse order)
[2026-03-07 06:47:53] 2026-03-07 05:47:14,514 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 06:47:53] 2026-03-07 05:47:14,514 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 06:47:53] 2026-03-07 05:47:14,543 | INFO     | did not find any defunct processes belonging to 345891
[2026-03-07 06:47:53] 2026-03-07 05:47:14,570 | INFO     | did not find any defunct processes belonging to 345891
[2026-03-07 06:47:53] 2026-03-07 05:47:14,571 | INFO     | ready for new job
[2026-03-07 06:47:53] 2026-03-07 05:47:14,571 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 06:47:53] 2026-03-07 05:47:14,574 | INFO     | **************************************
[2026-03-07 06:47:53] 2026-03-07 05:47:14,575 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 06:47:53] 2026-03-07 05:47:14,575 | INFO     | **************************************
[2026-03-07 06:47:53] 2026-03-07 05:47:14,575 | INFO     | 
[2026-03-07 06:47:53] 2026-03-07 05:47:14,580 | INFO     | architecture information:
[2026-03-07 06:47:53] 2026-03-07 05:47:14,580 | INFO     | executing command: cat /etc/os-release
[2026-03-07 06:47:53] 2026-03-07 05:47:14,599 | INFO     | cat /etc/os-release:
[2026-03-07 06:47:53] NAME="CentOS Linux"
[2026-03-07 06:47:53] VERSION="7 (Core)"
[2026-03-07 06:47:53] ID="centos"
[2026-03-07 06:47:53] ID_LIKE="rhel fedora"
[2026-03-07 06:47:53] VERSION_ID="7"
[2026-03-07 06:47:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 06:47:53] ANSI_COLOR="0;31"
[2026-03-07 06:47:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 06:47:53] HOME_URL="https://www.centos.org/"
[2026-03-07 06:47:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 06:47:53] 
[2026-03-07 06:47:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 06:47:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 06:47:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 06:47:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 06:47:53] 
[2026-03-07 06:47:53] 2026-03-07 05:47:14,600 | INFO     | **************************************
[2026-03-07 06:47:53] 2026-03-07 05:47:14,795 | INFO     | number of running child processes to parent process 345891: 1
[2026-03-07 06:47:53] 2026-03-07 05:47:14,795 | INFO     | maximum number of monitored processes: 6
[2026-03-07 06:47:53] 2026-03-07 05:47:14,796 | INFO     | aborting job monitoring since job object (job id=7042918549) has expired
[2026-03-07 06:47:53] 2026-03-07 05:47:15,102 | INFO     | executing command: df -mP /var/lib/boinc/var/slot52/slots/0
[2026-03-07 06:47:53] 2026-03-07 05:47:15,127 | INFO     | sufficient remaining disk space (20119027712 B)
[2026-03-07 06:47:53] 2026-03-07 05:47:15,128 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 06:47:53] 2026-03-07 05:47:15,128 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 06:47:53] 2026-03-07 05:47:15,128 | INFO     | update_server=False
[2026-03-07 06:47:53] 2026-03-07 05:47:15,128 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 06:47:53] 2026-03-07 05:47:15,129 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 06:47:53] 2026-03-07 05:47:15,129 | INFO     | will abort loop
[2026-03-07 06:47:53] 2026-03-07 05:47:15,129 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 06:47:53] 2026-03-07 05:47:15,521 | INFO     | all data control threads have been joined
[2026-03-07 06:47:53] 2026-03-07 05:47:16,133 | INFO     | [job] retrieve thread has finished
[2026-03-07 06:47:53] 2026-03-07 05:47:16,134 | INFO     | [job] job monitor thread has finished
[2026-03-07 06:47:53] 2026-03-07 05:47:16,188 | INFO     | all payload control threads have been joined
[2026-03-07 06:47:53] 2026-03-07 05:47:16,344 | INFO     | all job control threads have been joined
[2026-03-07 06:47:53] 2026-03-07 05:47:16,514 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 06:47:53] 2026-03-07 05:47:16,526 | INFO     | [data] control thread has finished
[2026-03-07 06:47:53] 2026-03-07 05:47:16,584 | INFO     | [payload] validate_post thread has finished
[2026-03-07 06:47:53] 2026-03-07 05:47:16,589 | INFO     | [payload] failed_post thread has finished
[2026-03-07 06:47:53] 2026-03-07 05:47:16,967 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 06:47:53] 2026-03-07 05:47:17,122 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 06:47:53] 2026-03-07 05:47:17,135 | INFO     | [data] copytool_out thread has finished
[2026-03-07 06:47:53] 2026-03-07 05:47:17,193 | INFO     | [payload] control thread has finished
[2026-03-07 06:47:53] 2026-03-07 05:47:17,349 | INFO     | [job] control thread has finished
[2026-03-07 06:47:53] 2026-03-07 05:47:17,412 | INFO     | [data] copytool_in thread has finished
[2026-03-07 06:47:53] 2026-03-07 05:47:17,436 | INFO     | [job] validate thread has finished
[2026-03-07 06:47:53] 2026-03-07 05:47:17,607 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 06:47:53] 2026-03-07 05:47:17,953 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 06:47:53] 2026-03-07 05:47:18,127 | INFO     | [job] queue monitor thread has finished
[2026-03-07 06:47:53] 2026-03-07 05:47:21,958 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 06:47:53] 2026-03-07 05:47:25,817 | INFO     | job.realtimelogging is not enabled
[2026-03-07 06:47:53] 2026-03-07 05:47:26,822 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 06:47:53] 2026-03-07 05:47:44,381 | INFO     | PID=340679 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 06:47:53] 2026-03-07 05:47:44,381 | INFO     | .. there are 14 such processes running
[2026-03-07 06:47:53] 2026-03-07 05:47:44,382 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 06:47:53] 2026-03-07 05:47:44,382 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 06:47:53] 2026-03-07 05:47:44,382 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 06:47:53] 2026-03-07 05:47:46,110 | INFO     | [monitor] cgroup control has ended
[2026-03-07 06:47:53] 2026-03-07 05:47:47,722 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22587736196928)>', '<ExcThread(monitor, started 22587428030208)>']
[2026-03-07 06:47:53] 2026-03-07 05:47:48,402 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 06:47:53] 2026-03-07 05:47:48,402 | INFO     | [monitor] control thread has ended
[2026-03-07 06:47:53] 2026-03-07 05:47:52,747 | INFO     | all workflow threads have been joined
[2026-03-07 06:47:53] 2026-03-07 05:47:52,747 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 06:47:53] 2026-03-07 05:47:52,747 | INFO     | traces error code: 0
[2026-03-07 06:47:53] 2026-03-07 05:47:52,747 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 06:47:53] 2026-03-07 05:47:52,904 [wrapper] ==== pilot stdout END ====
[2026-03-07 06:47:53] 2026-03-07 05:47:52,907 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 06:47:53] 2026-03-07 05:47:52,915 [wrapper] pilotpid: 340679
[2026-03-07 06:47:53] 2026-03-07 05:47:52,919 [wrapper] Pilot exit status: 0
[2026-03-07 06:47:53] 2026-03-07 05:47:52,941 [wrapper] pandaids: 7042918549
[2026-03-07 06:47:53] 2026-03-07 05:47:53,028 [wrapper] cleanup supervisor_pilot  866702 340680
[2026-03-07 06:47:53] 2026-03-07 05:47:53,033 [wrapper] Test setup, not cleaning
[2026-03-07 06:47:53] 2026-03-07 05:47:53,037 [wrapper] apfmon messages muted
[2026-03-07 06:47:53] 2026-03-07 05:47:53,040 [wrapper] ==== wrapper stdout END ====
[2026-03-07 06:47:53] 2026-03-07 05:47:53,043 [wrapper] ==== wrapper stderr END ====
[2026-03-07 06:47:53]  *** Error codes and diagnostics ***
[2026-03-07 06:47:53]     "exeErrorCode": 0,
[2026-03-07 06:47:53]     "exeErrorDiag": "",
[2026-03-07 06:47:53]     "pilotErrorCode": 0,
[2026-03-07 06:47:53]     "pilotErrorDiag": "",
[2026-03-07 06:47:53]  *** Listing of results directory ***
[2026-03-07 06:47:53] total 521532
[2026-03-07 06:47:53] -rw-r--r--. 1 boinc boinc      5111 Mar  6 07:22 queuedata.json
[2026-03-07 06:47:53] -rw-r--r--. 1 boinc boinc    584627 Mar  6 07:22 pilot3.tar.gz
[2026-03-07 06:47:53] -rwx------. 1 boinc boinc     36322 Mar  6 07:23 runpilot2-wrapper.sh
[2026-03-07 06:47:53] -rw-r--r--. 1 boinc boinc       100 Mar  6 23:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 06:47:53] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 23:26 run_atlas
[2026-03-07 06:47:53] -rw-r--r--. 1 boinc boinc       105 Mar  6 23:26 job.xml
[2026-03-07 06:47:53] -rw-r--r--. 1 boinc boinc      6560 Mar  6 23:26 init_data.xml
[2026-03-07 06:47:53] -rw-r--r--. 2 boinc boinc 237165313 Mar  6 23:26 EVNT.48966948._000016.pool.root.1
[2026-03-07 06:47:53] -rw-r--r--. 2 boinc boinc     15845 Mar  6 23:26 start_atlas.sh
[2026-03-07 06:47:53] drwxrwx--x. 2 boinc boinc      4096 Mar  6 23:26 shared
[2026-03-07 06:47:53] -rw-r--r--. 2 boinc boinc    597936 Mar  6 23:26 input.tar.gz
[2026-03-07 06:47:53] -rw-r--r--. 1 boinc boinc         0 Mar  6 23:26 boinc_lockfile
[2026-03-07 06:47:53] -rw-r--r--. 1 boinc boinc      2540 Mar  6 23:26 pandaJob.out
[2026-03-07 06:47:53] -rw-------. 1 boinc boinc    999504 Mar  6 23:26 agis_schedconf.cvmfs.json
[2026-03-07 06:47:53] -rw-------. 1 boinc boinc       452 Mar  6 23:27 workernode_map.json
[2026-03-07 06:47:53] drwx------. 5 boinc boinc      4096 Mar  6 23:27 pilot3
[2026-03-07 06:47:53] -rw-------. 1 boinc boinc 284478204 Mar  7 06:46 HITS.48966951._000955.pool.root.1
[2026-03-07 06:47:53] -rw-r--r--. 1 boinc boinc       531 Mar  7 06:46 boinc_task_state.xml
[2026-03-07 06:47:53] -rw-------. 1 boinc boinc      1036 Mar  7 06:47 memory_monitor_summary.json
[2026-03-07 06:47:53] -rw-------. 1 boinc boinc   1521291 Mar  7 06:47 agis_ddmendpoints.agis.ALL.json
[2026-03-07 06:47:53] -rw-------. 1 boinc boinc    564420 Mar  7 06:47 log.48966951._000955.job.log.tgz.1
[2026-03-07 06:47:53] -rw-------. 1 boinc boinc      6404 Mar  7 06:47 heartbeat.json
[2026-03-07 06:47:53] -rw-r--r--. 1 boinc boinc      8192 Mar  7 06:47 boinc_mmap_file
[2026-03-07 06:47:53] -rw-r--r--. 1 boinc boinc        29 Mar  7 06:47 wrapper_checkpoint.txt
[2026-03-07 06:47:53] -rw-------. 1 boinc boinc        95 Mar  7 06:47 pilot_heartbeat.json
[2026-03-07 06:47:53] -rw-------. 1 boinc boinc      5190 Mar  7 06:47 pilotlog.txt
[2026-03-07 06:47:53] -rw-------. 1 boinc boinc   3669225 Mar  7 06:47 log.48966951._000955.job.log.1
[2026-03-07 06:47:53] -rw-------. 1 boinc boinc       357 Mar  7 06:47 output.list
[2026-03-07 06:47:53] -rw-r--r--. 1 boinc boinc       620 Mar  7 06:47 runtime_log
[2026-03-07 06:47:53] -rw-------. 1 boinc boinc   4249600 Mar  7 06:47 result.tar.gz
[2026-03-07 06:47:53] -rw-r--r--. 1 boinc boinc      9205 Mar  7 06:47 runtime_log.err
[2026-03-07 06:47:53] -rw-------. 1 boinc boinc       668 Mar  7 06:47 7NTKDmildI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmTYQLDmzehZdn.diag
[2026-03-07 06:47:53] -rw-r--r--. 1 boinc boinc     20911 Mar  7 06:47 stderr.txt
[2026-03-07 06:47:53] HITS file was successfully produced:
[2026-03-07 06:47:53] -rw-------. 1 boinc boinc 284478204 Mar  7 06:46 shared/HITS.pool.root.1
[2026-03-07 06:47:53]  *** Contents of shared directory: ***
[2026-03-07 06:47:53] total 514180
[2026-03-07 06:47:53] -rw-r--r--. 2 boinc boinc 237165313 Mar  6 23:26 ATLAS.root_0
[2026-03-07 06:47:53] -rw-r--r--. 2 boinc boinc     15845 Mar  6 23:26 start_atlas.sh
[2026-03-07 06:47:53] -rw-r--r--. 2 boinc boinc    597936 Mar  6 23:26 input.tar.gz
[2026-03-07 06:47:53] -rw-------. 1 boinc boinc 284478204 Mar  7 06:46 HITS.pool.root.1
[2026-03-07 06:47:53] -rw-------. 1 boinc boinc   4249600 Mar  7 06:47 result.tar.gz
06:47:54 (336826): run_atlas exited; CPU time 101499.004696
06:47:54 (336826): called boinc_finish(0)

</stderr_txt>
]]>

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