Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:24:10 (505003): wrapper (7.7.26015): starting
23:24:10 (505003): wrapper: running run_atlas (--nthreads 4)
[2026-03-06 23:24:10] Arguments: --nthreads 4
[2026-03-06 23:24:10] Threads: 4
[2026-03-06 23:24:10] Checking for CVMFS
[2026-03-06 23:24:10] No cvmfs_config command found, will try listing directly
[2026-03-06 23:24:10] CVMFS is ok
[2026-03-06 23:24:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 23:24:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 23:24:10] Further information can be found at the LHC@home message board.
[2026-03-06 23:24:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 23:24:10] Checking for apptainer binary...
[2026-03-06 23:24:10] which: no apptainer in ((null))
[2026-03-06 23:24:10] apptainer is not installed, using version from CVMFS
[2026-03-06 23:24:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 23:24:10] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-03-06 23:24:10] apptainer works
[2026-03-06 23:24:10] Set ATHENA_PROC_NUMBER=4
[2026-03-06 23:24:10] Set ATHENA_CORE_NUMBER=4
[2026-03-06 23:24:10] Starting ATLAS job with PandaID=7042913738
[2026-03-06 23:24:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 03:17:01]  *** The last 200 lines of the pilot log: ***
[2026-03-07 03:17:01] 2026-03-07 02:16:20,750 | INFO     | log transfer has been attempted: DONE
[2026-03-07 03:17:01] 2026-03-07 02:16:20,751 | INFO     | job 7042913738 has finished - writing final server update
[2026-03-07 03:17:01] 2026-03-07 02:16:20,751 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_38740/.job.ad'
[2026-03-07 03:17:01] 2026-03-07 02:16:20,751 | INFO     | total number of processed events: 400 (read)
[2026-03-07 03:17:01] 2026-03-07 02:16:20,763 | INFO     | using path: /var/lib/boinc/var/slot40/slots/0/PanDA_Pilot-7042913738/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 03:17:01] 2026-03-07 02:16:20,763 | INFO     | extracted standard info from prmon json
[2026-03-07 03:17:01] 2026-03-07 02:16:20,763 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 03:17:01] 2026-03-07 02:16:20,763 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 03:17:01] 2026-03-07 02:16:20,764 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 03:17:01] 2026-03-07 02:16:20,764 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 03:17:01] 2026-03-07 02:16:20,768 | INFO     | fitting pss+swap vs Time
[2026-03-07 03:17:01] 2026-03-07 02:16:20,769 | INFO     | sum of square deviations: 3675146117.0
[2026-03-07 03:17:01] 2026-03-07 02:16:20,770 | INFO     | sum of deviations: 19253943589.5
[2026-03-07 03:17:01] 2026-03-07 02:16:20,770 | INFO     | mean x: 1772842820.5
[2026-03-07 03:17:01] 2026-03-07 02:16:20,770 | INFO     | mean y: 2304444.8552631577
[2026-03-07 03:17:01] 2026-03-07 02:16:20,770 | INFO     | intersect: -9285548220.665592
[2026-03-07 03:17:01] 2026-03-07 02:16:20,771 | INFO     | chi2: 2.045381373828449
[2026-03-07 03:17:01] 2026-03-07 02:16:20,771 | INFO     | sum of square deviations: 3438620752.0
[2026-03-07 03:17:01] 2026-03-07 02:16:20,772 | INFO     | sum of deviations: 31575912387.999996
[2026-03-07 03:17:01] 2026-03-07 02:16:20,772 | INFO     | mean x: 1772842668.0
[2026-03-07 03:17:01] 2026-03-07 02:16:20,773 | INFO     | mean y: 2312238.7668161434
[2026-03-07 03:17:01] 2026-03-07 02:16:20,773 | INFO     | intersect: -16277216328.004353
[2026-03-07 03:17:01] 2026-03-07 02:16:20,773 | INFO     | chi2: 1.3739799820697074
[2026-03-07 03:17:01] 2026-03-07 02:16:20,773 | INFO     | current chi2=1.3739799820697074 (change=32.82524229220118 %)
[2026-03-07 03:17:01] 2026-03-07 02:16:20,773 | INFO     | sum of square deviations: 3212467674.5
[2026-03-07 03:17:01] 2026-03-07 02:16:20,775 | INFO     | sum of deviations: 30641408430.999996
[2026-03-07 03:17:01] 2026-03-07 02:16:20,775 | INFO     | mean x: 1772842515.5
[2026-03-07 03:17:01] 2026-03-07 02:16:20,775 | INFO     | mean y: 2311608.5045871558
[2026-03-07 03:17:01] 2026-03-07 02:16:20,775 | INFO     | intersect: -16907552429.18783
[2026-03-07 03:17:01] 2026-03-07 02:16:20,775 | INFO     | chi2: 1.3746440117678151
[2026-03-07 03:17:01] 2026-03-07 02:16:20,776 | INFO     | current chi2=1.3746440117678151 (change=-0.04832892085570865 %)
[2026-03-07 03:17:01] 2026-03-07 02:16:20,776 | INFO     | right removable region: 217
[2026-03-07 03:17:01] 2026-03-07 02:16:20,776 | INFO     | sum of square deviations: 3438620752.0
[2026-03-07 03:17:01] 2026-03-07 02:16:20,777 | INFO     | sum of deviations: -10570921312.0
[2026-03-07 03:17:01] 2026-03-07 02:16:20,777 | INFO     | mean x: 1772842973.0
[2026-03-07 03:17:01] 2026-03-07 02:16:20,778 | INFO     | mean y: 2323462.125560538
[2026-03-07 03:17:01] 2026-03-07 02:16:20,778 | INFO     | intersect: 5452352679.571272
[2026-03-07 03:17:01] 2026-03-07 02:16:20,778 | INFO     | chi2: 0.7056291138735651
[2026-03-07 03:17:01] 2026-03-07 02:16:20,778 | INFO     | current chi2=0.7056291138735651 (change=65.5013425416698 %)
[2026-03-07 03:17:01] 2026-03-07 02:16:20,778 | INFO     | sum of square deviations: 3212467674.5
[2026-03-07 03:17:01] 2026-03-07 02:16:20,780 | INFO     | sum of deviations: -8970605527.0
[2026-03-07 03:17:01] 2026-03-07 02:16:20,780 | INFO     | mean x: 1772843125.5
[2026-03-07 03:17:01] 2026-03-07 02:16:20,780 | INFO     | mean y: 2322369.7155963304
[2026-03-07 03:17:01] 2026-03-07 02:16:20,780 | INFO     | intersect: 4952870655.805207
[2026-03-07 03:17:01] 2026-03-07 02:16:20,780 | INFO     | chi2: 0.701459232251143
[2026-03-07 03:17:01] 2026-03-07 02:16:20,780 | INFO     | current chi2=0.701459232251143 (change=0.5909452346051025 %)
[2026-03-07 03:17:01] 2026-03-07 02:16:20,781 | INFO     | left removable region: 20
[2026-03-07 03:17:01] 2026-03-07 02:16:20,781 | INFO     | sum of square deviations: 2370641658.0
[2026-03-07 03:17:01] 2026-03-07 02:16:20,782 | INFO     | sum of deviations: 6600852883.0
[2026-03-07 03:17:01] 2026-03-07 02:16:20,782 | INFO     | mean x: 1772843095.0
[2026-03-07 03:17:01] 2026-03-07 02:16:20,782 | INFO     | mean y: 2327921.0862944163
[2026-03-07 03:17:01] 2026-03-07 02:16:20,782 | INFO     | intersect: -4934004997.57593
[2026-03-07 03:17:01] 2026-03-07 02:16:20,782 | INFO     | chi2: 0.0004201609521856311
[2026-03-07 03:17:01] 2026-03-07 02:16:20,783 | INFO     | current memory leak: 2.78 B/s (using 197 data points, chi2=0.00)
[2026-03-07 03:17:01] 2026-03-07 02:16:20,783 | INFO     | could have reported an average CPU frequency of 2570 MHz (11 samples)
[2026-03-07 03:17:01] 2026-03-07 02:16:20,783 | INFO     | ..............................
[2026-03-07 03:17:01] 2026-03-07 02:16:20,784 | INFO     | . Timing measurements:
[2026-03-07 03:17:01] 2026-03-07 02:16:20,784 | INFO     | . get job = 0 s
[2026-03-07 03:17:01] 2026-03-07 02:16:20,784 | INFO     | . initial setup = 7 s
[2026-03-07 03:17:01] 2026-03-07 02:16:20,784 | INFO     | . payload setup = 7 s
[2026-03-07 03:17:01] 2026-03-07 02:16:20,784 | INFO     | . stage-in = 0 s
[2026-03-07 03:17:01] 2026-03-07 02:16:20,784 | INFO     | . payload execution = 13880 s
[2026-03-07 03:17:01] 2026-03-07 02:16:20,784 | INFO     | . stage-out = 1 s
[2026-03-07 03:17:01] 2026-03-07 02:16:20,784 | INFO     | . log creation = 0 s
[2026-03-07 03:17:01] 2026-03-07 02:16:20,784 | INFO     | ..............................
[2026-03-07 03:17:01] 2026-03-07 02:16:21,252 | INFO     | 
[2026-03-07 03:17:01] 2026-03-07 02:16:21,252 | INFO     | job summary report
[2026-03-07 03:17:01] 2026-03-07 02:16:21,252 | INFO     | --------------------------------------------------
[2026-03-07 03:17:01] 2026-03-07 02:16:21,252 | INFO     | PanDA job id: 7042913738
[2026-03-07 03:17:01] 2026-03-07 02:16:21,252 | INFO     | task id: 48966988
[2026-03-07 03:17:01] 2026-03-07 02:16:21,252 | INFO     | errors: (none)
[2026-03-07 03:17:01] 2026-03-07 02:16:21,252 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 03:17:01] 2026-03-07 02:16:21,252 | INFO     | pilot state: finished 
[2026-03-07 03:17:01] 2026-03-07 02:16:21,253 | INFO     | transexitcode: 0
[2026-03-07 03:17:01] 2026-03-07 02:16:21,253 | INFO     | exeerrorcode: 0
[2026-03-07 03:17:01] 2026-03-07 02:16:21,253 | INFO     | exeerrordiag: 
[2026-03-07 03:17:01] 2026-03-07 02:16:21,253 | INFO     | exitcode: 0
[2026-03-07 03:17:01] 2026-03-07 02:16:21,253 | INFO     | exitmsg: OK
[2026-03-07 03:17:01] 2026-03-07 02:16:21,253 | INFO     | cpuconsumptiontime: 52571 s
[2026-03-07 03:17:01] 2026-03-07 02:16:21,253 | INFO     | nevents: 400
[2026-03-07 03:17:01] 2026-03-07 02:16:21,253 | INFO     | neventsw: 0
[2026-03-07 03:17:01] 2026-03-07 02:16:21,253 | INFO     | pid: 513976
[2026-03-07 03:17:01] 2026-03-07 02:16:21,253 | INFO     | pgrp: 513976
[2026-03-07 03:17:01] 2026-03-07 02:16:21,253 | INFO     | corecount: 4
[2026-03-07 03:17:01] 2026-03-07 02:16:21,253 | INFO     | event service: False
[2026-03-07 03:17:01] 2026-03-07 02:16:21,253 | INFO     | sizes: {0: 2294751, 1: 2295880, 12: 2295880, 13891: 2326295, 13892: 2335315, 13894: 2335371, 13898: 2335693}
[2026-03-07 03:17:01] 2026-03-07 02:16:21,254 | INFO     | --------------------------------------------------
[2026-03-07 03:17:01] 2026-03-07 02:16:21,254 | INFO     | 
[2026-03-07 03:17:01] 2026-03-07 02:16:21,255 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot40/slots/0
[2026-03-07 03:17:01] 2026-03-07 02:16:21,276 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 03:17:01] 2026-03-07 02:16:21,277 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 03:17:01] 2026-03-07 02:16:21,277 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 03:17:01] 2026-03-07 02:16:21,277 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 03:17:01] 2026-03-07 02:16:21,277 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 03:17:01] 2026-03-07 02:16:21,277 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 03:17:01] 2026-03-07 02:16:21,277 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 03:17:01] 2026-03-07 02:16:21,277 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 03:17:01] 2026-03-07 02:16:21,277 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 03:17:01] 2026-03-07 02:16:21,277 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 03:17:01] 2026-03-07 02:16:21,277 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 03:17:01] 2026-03-07 02:16:21,277 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 03:17:01] 2026-03-07 02:16:21,278 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 03:17:01] 2026-03-07 02:16:21,278 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 03:17:01] 2026-03-07 02:16:21,278 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 03:17:01] 2026-03-07 02:16:21,278 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 03:17:01] 2026-03-07 02:16:21,278 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 03:17:01] 2026-03-07 02:16:21,278 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 03:17:01] 2026-03-07 02:16:21,278 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 03:17:01] 2026-03-07 02:16:21,278 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 03:17:01] 2026-03-07 02:16:21,278 | INFO     | job 7042913738 has completed (purged errors)
[2026-03-07 03:17:01] 2026-03-07 02:16:21,278 | INFO     | overall cleanup function is called
[2026-03-07 03:17:01] 2026-03-07 02:16:22,286 | INFO     | --- collectZombieJob: --- 10, [513976]
[2026-03-07 03:17:01] 2026-03-07 02:16:22,286 | INFO     | zombie collector waiting for pid 513976
[2026-03-07 03:17:01] 2026-03-07 02:16:22,286 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 03:17:01] 2026-03-07 02:16:22,286 | INFO     | collected zombie processes
[2026-03-07 03:17:01] 2026-03-07 02:16:22,286 | INFO     | will attempt to kill all subprocesses of pid=513976
[2026-03-07 03:17:01] 2026-03-07 02:16:22,688 | INFO     | process IDs to be killed: [513976] (in reverse order)
[2026-03-07 03:17:01] 2026-03-07 02:16:22,811 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 03:17:01] 2026-03-07 02:16:22,811 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 03:17:01] 2026-03-07 02:16:22,824 | INFO     | did not find any defunct processes belonging to 513976
[2026-03-07 03:17:01] 2026-03-07 02:16:22,836 | INFO     | did not find any defunct processes belonging to 513976
[2026-03-07 03:17:01] 2026-03-07 02:16:22,836 | INFO     | ready for new job
[2026-03-07 03:17:01] 2026-03-07 02:16:22,836 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 03:17:01] 2026-03-07 02:16:22,839 | INFO     | **************************************
[2026-03-07 03:17:01] 2026-03-07 02:16:22,839 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 03:17:01] 2026-03-07 02:16:22,839 | INFO     | **************************************
[2026-03-07 03:17:01] 2026-03-07 02:16:22,839 | INFO     | 
[2026-03-07 03:17:01] 2026-03-07 02:16:22,843 | INFO     | architecture information:
[2026-03-07 03:17:01] 2026-03-07 02:16:22,843 | INFO     | executing command: cat /etc/os-release
[2026-03-07 03:17:01] 2026-03-07 02:16:22,860 | INFO     | cat /etc/os-release:
[2026-03-07 03:17:01] NAME="CentOS Linux"
[2026-03-07 03:17:01] VERSION="7 (Core)"
[2026-03-07 03:17:01] ID="centos"
[2026-03-07 03:17:01] ID_LIKE="rhel fedora"
[2026-03-07 03:17:01] VERSION_ID="7"
[2026-03-07 03:17:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 03:17:01] ANSI_COLOR="0;31"
[2026-03-07 03:17:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 03:17:01] HOME_URL="https://www.centos.org/"
[2026-03-07 03:17:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 03:17:01] 
[2026-03-07 03:17:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 03:17:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 03:17:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 03:17:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 03:17:01] 
[2026-03-07 03:17:01] 2026-03-07 02:16:22,861 | INFO     | **************************************
[2026-03-07 03:17:01] 2026-03-07 02:16:23,363 | INFO     | executing command: df -mP /var/lib/boinc/var/slot40/slots/0
[2026-03-07 03:17:01] 2026-03-07 02:16:23,378 | INFO     | sufficient remaining disk space (21166555136 B)
[2026-03-07 03:17:01] 2026-03-07 02:16:23,378 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 03:17:01] 2026-03-07 02:16:23,379 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 03:17:01] 2026-03-07 02:16:23,379 | INFO     | update_server=False
[2026-03-07 03:17:01] 2026-03-07 02:16:23,379 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 03:17:01] 2026-03-07 02:16:23,507 | INFO     | all data control threads have been joined
[2026-03-07 03:17:01] 2026-03-07 02:16:23,591 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 03:17:01] 2026-03-07 02:16:23,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 03:17:01] 2026-03-07 02:16:23,741 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 03:17:01] 2026-03-07 02:16:23,741 | INFO     | aborting loop
[2026-03-07 03:17:01] 2026-03-07 02:16:24,384 | INFO     | [job] retrieve thread has finished
[2026-03-07 03:17:01] 2026-03-07 02:16:24,396 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 03:17:01] 2026-03-07 02:16:24,507 | INFO     | [data] copytool_in thread has finished
[2026-03-07 03:17:01] 2026-03-07 02:16:24,512 | INFO     | [data] control thread has finished
[2026-03-07 03:17:01] 2026-03-07 02:16:24,677 | INFO     | all job control threads have been joined
[2026-03-07 03:17:01] 2026-03-07 02:16:24,728 | INFO     | [job] validate thread has finished
[2026-03-07 03:17:01] 2026-03-07 02:16:24,746 | INFO     | [job] job monitor thread has finished
[2026-03-07 03:17:01] 2026-03-07 02:16:24,801 | INFO     | all payload control threads have been joined
[2026-03-07 03:17:01] 2026-03-07 02:16:24,891 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 03:17:01] 2026-03-07 02:16:25,094 | INFO     | [payload] validate_post thread has finished
[2026-03-07 03:17:01] 2026-03-07 02:16:25,101 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 03:17:01] 2026-03-07 02:16:25,231 | INFO     | [payload] failed_post thread has finished
[2026-03-07 03:17:01] 2026-03-07 02:16:25,422 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 03:17:01] 2026-03-07 02:16:25,635 | INFO     | [data] copytool_out thread has finished
[2026-03-07 03:17:01] 2026-03-07 02:16:25,682 | INFO     | [job] control thread has finished
[2026-03-07 03:17:01] 2026-03-07 02:16:25,806 | INFO     | [payload] control thread has finished
[2026-03-07 03:17:01] 2026-03-07 02:16:25,887 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 03:17:01] 2026-03-07 02:16:26,892 | INFO     | [job] queue monitor thread has finished
[2026-03-07 03:17:01] 2026-03-07 02:16:27,596 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 03:17:01] 2026-03-07 02:16:53,244 | INFO     | PID=509130 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-07 03:17:01] 2026-03-07 02:16:53,244 | INFO     | .. there are 12 such processes running
[2026-03-07 03:17:01] 2026-03-07 02:16:53,245 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 03:17:01] 2026-03-07 02:16:53,245 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 03:17:01] 2026-03-07 02:16:53,245 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 03:17:01] 2026-03-07 02:16:54,306 | INFO     | [monitor] cgroup control has ended
[2026-03-07 03:17:01] 2026-03-07 02:16:55,868 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22585338754880)>', '<ExcThread(monitor, started 22585088923392)>']
[2026-03-07 03:17:01] 2026-03-07 02:16:56,260 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 03:17:01] 2026-03-07 02:16:56,260 | INFO     | [monitor] control thread has ended
[2026-03-07 03:17:01] 2026-03-07 02:17:00,893 | INFO     | all workflow threads have been joined
[2026-03-07 03:17:01] 2026-03-07 02:17:00,893 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 03:17:01] 2026-03-07 02:17:00,893 | INFO     | traces error code: 0
[2026-03-07 03:17:01] 2026-03-07 02:17:00,894 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 03:17:01] 2026-03-07 02:17:01,066 [wrapper] ==== pilot stdout END ====
[2026-03-07 03:17:01] 2026-03-07 02:17:01,070 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 03:17:01] 2026-03-07 02:17:01,072 [wrapper] pilotpid: 509130
[2026-03-07 03:17:01] 2026-03-07 02:17:01,075 [wrapper] Pilot exit status: 0
[2026-03-07 03:17:01] 2026-03-07 02:17:01,088 [wrapper] pandaids: 7042913738
[2026-03-07 03:17:01] 2026-03-07 02:17:01,163 [wrapper] cleanup supervisor_pilot  785588 509131
[2026-03-07 03:17:01] 2026-03-07 02:17:01,166 [wrapper] Test setup, not cleaning
[2026-03-07 03:17:01] 2026-03-07 02:17:01,169 [wrapper] apfmon messages muted
[2026-03-07 03:17:01] 2026-03-07 02:17:01,172 [wrapper] ==== wrapper stdout END ====
[2026-03-07 03:17:01] 2026-03-07 02:17:01,174 [wrapper] ==== wrapper stderr END ====
[2026-03-07 03:17:01]  *** Error codes and diagnostics ***
[2026-03-07 03:17:01]     "exeErrorCode": 0,
[2026-03-07 03:17:01]     "exeErrorDiag": "",
[2026-03-07 03:17:01]     "pilotErrorCode": 0,
[2026-03-07 03:17:01]     "pilotErrorDiag": "",
[2026-03-07 03:17:01]  *** Listing of results directory ***
[2026-03-07 03:17:01] total 412116
[2026-03-07 03:17:01] -rw-r--r--. 1 boinc boinc    584627 Mar  6 06:53 pilot3.tar.gz
[2026-03-07 03:17:01] -rw-r--r--. 1 boinc boinc      5111 Mar  6 06:54 queuedata.json
[2026-03-07 03:17:01] -rwx------. 1 boinc boinc     36322 Mar  6 06:54 runpilot2-wrapper.sh
[2026-03-07 03:17:01] -rw-r--r--. 1 boinc boinc       100 Mar  6 23:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 03:17:01] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 23:24 run_atlas
[2026-03-07 03:17:01] -rw-r--r--. 1 boinc boinc       105 Mar  6 23:24 job.xml
[2026-03-07 03:17:01] -rw-r--r--. 2 boinc boinc 210704306 Mar  6 23:24 EVNT.48966985._000218.pool.root.1
[2026-03-07 03:17:01] -rw-r--r--. 1 boinc boinc      6560 Mar  6 23:24 init_data.xml
[2026-03-07 03:17:01] -rw-r--r--. 2 boinc boinc     15845 Mar  6 23:24 start_atlas.sh
[2026-03-07 03:17:01] drwxrwx--x. 2 boinc boinc      4096 Mar  6 23:24 shared
[2026-03-07 03:17:01] -rw-r--r--. 2 boinc boinc    597959 Mar  6 23:24 input.tar.gz
[2026-03-07 03:17:01] -rw-r--r--. 1 boinc boinc         0 Mar  6 23:24 boinc_lockfile
[2026-03-07 03:17:01] -rw-r--r--. 1 boinc boinc      2590 Mar  6 23:24 pandaJob.out
[2026-03-07 03:17:01] -rw-------. 1 boinc boinc    999504 Mar  6 23:24 agis_schedconf.cvmfs.json
[2026-03-07 03:17:01] -rw-------. 1 boinc boinc       452 Mar  6 23:24 workernode_map.json
[2026-03-07 03:17:01] drwx------. 5 boinc boinc      4096 Mar  6 23:24 pilot3
[2026-03-07 03:17:01] -rw-------. 1 boinc boinc 202686582 Mar  7 03:15 HITS.48966988._001705.pool.root.1
[2026-03-07 03:17:01] -rw-r--r--. 1 boinc boinc       529 Mar  7 03:15 boinc_task_state.xml
[2026-03-07 03:17:01] -rw-------. 1 boinc boinc      1036 Mar  7 03:16 memory_monitor_summary.json
[2026-03-07 03:17:01] -rw-------. 1 boinc boinc   1521291 Mar  7 03:16 agis_ddmendpoints.agis.ALL.json
[2026-03-07 03:17:01] -rw-------. 1 boinc boinc    388455 Mar  7 03:16 log.48966988._001705.job.log.tgz.1
[2026-03-07 03:17:01] -rw-------. 1 boinc boinc      6403 Mar  7 03:16 heartbeat.json
[2026-03-07 03:17:01] -rw-------. 1 boinc boinc        95 Mar  7 03:16 pilot_heartbeat.json
[2026-03-07 03:17:01] -rw-r--r--. 1 boinc boinc        27 Mar  7 03:16 wrapper_checkpoint.txt
[2026-03-07 03:17:01] -rw-r--r--. 1 boinc boinc      8192 Mar  7 03:16 boinc_mmap_file
[2026-03-07 03:17:01] -rw-------. 1 boinc boinc      4828 Mar  7 03:17 pilotlog.txt
[2026-03-07 03:17:01] -rw-------. 1 boinc boinc   1946419 Mar  7 03:17 log.48966988._001705.job.log.1
[2026-03-07 03:17:01] -rw-------. 1 boinc boinc       357 Mar  7 03:17 output.list
[2026-03-07 03:17:01] -rw-r--r--. 1 boinc boinc       620 Mar  7 03:17 runtime_log
[2026-03-07 03:17:01] -rw-------. 1 boinc boinc   2355200 Mar  7 03:17 result.tar.gz
[2026-03-07 03:17:01] -rw-------. 1 boinc boinc       665 Mar  7 03:17 yYENDm7JdI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmTUQLDmuZaFYn.diag
[2026-03-07 03:17:01] -rw-r--r--. 1 boinc boinc      9205 Mar  7 03:17 runtime_log.err
[2026-03-07 03:17:01] -rw-r--r--. 1 boinc boinc     20874 Mar  7 03:17 stderr.txt
[2026-03-07 03:17:01] HITS file was successfully produced:
[2026-03-07 03:17:01] -rw-------. 1 boinc boinc 202686582 Mar  7 03:15 shared/HITS.pool.root.1
[2026-03-07 03:17:01]  *** Contents of shared directory: ***
[2026-03-07 03:17:01] total 406616
[2026-03-07 03:17:01] -rw-r--r--. 2 boinc boinc 210704306 Mar  6 23:24 ATLAS.root_0
[2026-03-07 03:17:01] -rw-r--r--. 2 boinc boinc     15845 Mar  6 23:24 start_atlas.sh
[2026-03-07 03:17:01] -rw-r--r--. 2 boinc boinc    597959 Mar  6 23:24 input.tar.gz
[2026-03-07 03:17:01] -rw-------. 1 boinc boinc 202686582 Mar  7 03:15 HITS.pool.root.1
[2026-03-07 03:17:01] -rw-------. 1 boinc boinc   2355200 Mar  7 03:17 result.tar.gz
03:17:02 (505003): run_atlas exited; CPU time 53154.642264
03:17:02 (505003): called boinc_finish(0)

</stderr_txt>
]]>

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