Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:00:00 (126676): wrapper (7.7.26015): starting
20:00:00 (126676): wrapper: running run_atlas (--nthreads 3)
[2026-03-06 20:00:00] Arguments: --nthreads 3
[2026-03-06 20:00:00] Threads: 3
[2026-03-06 20:00:00] Checking for CVMFS
[2026-03-06 20:00:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 20:00:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 20:00:00] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 20:00:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 20:00:01] 2.9.2.0 2547764 13041 86468 156965 2 188 29809066 36864000 0 130560 0 4957057 99.981 480914 9878 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-06 20:00:01] CVMFS is ok
[2026-03-06 20:00:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 20:00:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 20:00:01] Further information can be found at the LHC@home message board.
[2026-03-06 20:00:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 20:00:01] Checking for apptainer binary...
[2026-03-06 20:00:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-06 20:00:01] Running /usr/bin/apptainer --version
[2026-03-06 20:00:01] apptainer version 1.4.1-1.1
[2026-03-06 20:00:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 20:00:01] atlasA228b
[2026-03-06 20:00:01] apptainer works
[2026-03-06 20:00:01] Set ATHENA_PROC_NUMBER=3
[2026-03-06 20:00:01] Set ATHENA_CORE_NUMBER=3
[2026-03-06 20:00:01] Starting ATLAS job with PandaID=7042914533
[2026-03-06 20:00:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 23:00:29]  *** The last 200 lines of the pilot log: ***
[2026-03-06 23:00:29] 2026-03-06 21:59:47,784 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 23:00:29] 2026-03-06 21:59:47,873 | INFO     | process IDs to be killed: [135192] (in reverse order)
[2026-03-06 23:00:29] 2026-03-06 21:59:47,884 | INFO     | number of running child processes to parent process 135192: 1
[2026-03-06 23:00:29] 2026-03-06 21:59:47,884 | INFO     | maximum number of monitored processes: 6
[2026-03-06 23:00:29] 2026-03-06 21:59:47,884 | INFO     | aborting job monitoring since job object (job id=7042914533) has expired
[2026-03-06 23:00:29] 2026-03-06 21:59:47,899 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 23:00:29] 2026-03-06 21:59:47,899 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 23:00:29] 2026-03-06 21:59:47,900 | INFO     | did not find any defunct processes belonging to 135192
[2026-03-06 23:00:29] 2026-03-06 21:59:47,901 | INFO     | did not find any defunct processes belonging to 135192
[2026-03-06 23:00:29] 2026-03-06 21:59:47,902 | INFO     | ready for new job
[2026-03-06 23:00:29] 2026-03-06 21:59:47,902 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 23:00:29] 2026-03-06 21:59:47,902 | INFO     | **************************************
[2026-03-06 23:00:29] 2026-03-06 21:59:47,902 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 23:00:29] 2026-03-06 21:59:47,902 | INFO     | **************************************
[2026-03-06 23:00:29] 2026-03-06 21:59:47,902 | INFO     | 
[2026-03-06 23:00:29] 2026-03-06 21:59:47,903 | INFO     | architecture information:
[2026-03-06 23:00:29] 2026-03-06 21:59:47,903 | INFO     | executing command: cat /etc/os-release
[2026-03-06 23:00:29] 2026-03-06 21:59:47,912 | INFO     | cat /etc/os-release:
[2026-03-06 23:00:29] NAME="CentOS Linux"
[2026-03-06 23:00:29] VERSION="7 (Core)"
[2026-03-06 23:00:29] ID="centos"
[2026-03-06 23:00:29] ID_LIKE="rhel fedora"
[2026-03-06 23:00:29] VERSION_ID="7"
[2026-03-06 23:00:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 23:00:29] ANSI_COLOR="0;31"
[2026-03-06 23:00:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 23:00:29] HOME_URL="https://www.centos.org/"
[2026-03-06 23:00:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 23:00:29] 
[2026-03-06 23:00:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 23:00:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 23:00:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 23:00:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 23:00:29] 
[2026-03-06 23:00:29] 2026-03-06 21:59:47,912 | INFO     | **************************************
[2026-03-06 23:00:29] 2026-03-06 21:59:48,416 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-06 23:00:29] 2026-03-06 21:59:48,429 | INFO     | sufficient remaining disk space (274343133184 B)
[2026-03-06 23:00:29] 2026-03-06 21:59:48,429 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 23:00:29] 2026-03-06 21:59:48,429 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 23:00:29] 2026-03-06 21:59:48,430 | INFO     | update_server=False
[2026-03-06 23:00:29] 2026-03-06 21:59:48,430 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 23:00:29] 2026-03-06 21:59:48,430 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 23:00:29] 2026-03-06 21:59:48,430 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 23:00:29] 2026-03-06 21:59:48,430 | INFO     | will abort loop
[2026-03-06 23:00:29] 2026-03-06 21:59:48,430 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-06 23:00:29] 2026-03-06 21:59:48,430 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 23:00:29] 2026-03-06 21:59:48,430 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 23:00:29] 2026-03-06 21:59:48,430 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 23:00:29] 2026-03-06 21:59:48,483 | INFO     | all payload control threads have been joined
[2026-03-06 23:00:29] 2026-03-06 21:59:49,060 | INFO     | all job control threads have been joined
[2026-03-06 23:00:29] 2026-03-06 21:59:49,435 | INFO     | [job] queue monitor thread has finished
[2026-03-06 23:00:29] 2026-03-06 21:59:49,435 | INFO     | [job] retrieve thread has finished
[2026-03-06 23:00:29] 2026-03-06 21:59:49,436 | INFO     | [job] job monitor thread has finished
[2026-03-06 23:00:29] 2026-03-06 21:59:49,444 | INFO     | all data control threads have been joined
[2026-03-06 23:00:29] 2026-03-06 21:59:49,489 | INFO     | [payload] control thread has finished
[2026-03-06 23:00:29] 2026-03-06 21:59:49,600 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 23:00:29] 2026-03-06 21:59:49,711 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 23:00:29] 2026-03-06 21:59:49,711 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 23:00:29] 2026-03-06 21:59:49,925 | INFO     | [job] validate thread has finished
[2026-03-06 23:00:29] 2026-03-06 21:59:50,003 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 23:00:29] 2026-03-06 21:59:50,037 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 23:00:29] 2026-03-06 21:59:50,065 | INFO     | [job] control thread has finished
[2026-03-06 23:00:29] 2026-03-06 21:59:50,216 | INFO     | [data] copytool_in thread has finished
[2026-03-06 23:00:29] 2026-03-06 21:59:50,242 | INFO     | [payload] validate_post thread has finished
[2026-03-06 23:00:29] 2026-03-06 21:59:50,450 | INFO     | [data] control thread has finished
[2026-03-06 23:00:29] 2026-03-06 21:59:50,635 | INFO     | [payload] failed_post thread has finished
[2026-03-06 23:00:29] 2026-03-06 21:59:51,606 | INFO     | [data] copytool_out thread has finished
[2026-03-06 23:00:29] 2026-03-06 21:59:53,718 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 23:00:29] 2026-03-06 21:59:58,675 | INFO     | job.realtimelogging is not enabled
[2026-03-06 23:00:29] 2026-03-06 21:59:59,681 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 23:00:29] 2026-03-06 22:00:06,837 [wrapper] supervise_pilot (15 min periods counter: 13)
[2026-03-06 23:00:29] 2026-03-06 22:00:23,153 | INFO     | [monitor] cgroup control has ended
[2026-03-06 23:00:29] 2026-03-06 22:00:24,267 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140183572707136)>', '<ExcThread(monitor, started 140182498047744)>']
[2026-03-06 23:00:29] 2026-03-06 22:00:24,623 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 23:00:29] 2026-03-06 22:00:24,624 | INFO     | [monitor] control thread has ended
[2026-03-06 23:00:29] 2026-03-06 22:00:29,292 | INFO     | all workflow threads have been joined
[2026-03-06 23:00:29] 2026-03-06 22:00:29,293 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 23:00:29] 2026-03-06 22:00:29,293 | INFO     | traces error code: 0
[2026-03-06 23:00:29] 2026-03-06 22:00:29,293 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 23:00:29] 2026-03-06 22:00:29,346 [wrapper] ==== pilot stdout END ====
[2026-03-06 23:00:29] 2026-03-06 22:00:29,349 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 23:00:29] 2026-03-06 22:00:29,351 [wrapper] pilotpid: 130745
[2026-03-06 23:00:29] 2026-03-06 22:00:29,354 [wrapper] Pilot exit status: 0
[2026-03-06 23:00:29] 2026-03-06 22:00:29,361 [wrapper] pandaids: 7042914533
[2026-03-06 23:00:29] 2026-03-06 22:00:29,379 [wrapper] cleanup supervisor_pilot  142353 130746
[2026-03-06 23:00:29] 2026-03-06 22:00:29,382 [wrapper] Test setup, not cleaning
[2026-03-06 23:00:29] 2026-03-06 22:00:29,384 [wrapper] apfmon messages muted
[2026-03-06 23:00:29] 2026-03-06 22:00:29,386 [wrapper] ==== wrapper stdout END ====
[2026-03-06 23:00:29] 2026-03-06 22:00:29,389 [wrapper] ==== wrapper stderr END ====
[2026-03-06 23:00:29]  *** Error codes and diagnostics ***
[2026-03-06 23:00:29]     "exeErrorCode": 0,
[2026-03-06 23:00:29]     "exeErrorDiag": "",
[2026-03-06 23:00:29]     "pilotErrorCode": 0,
[2026-03-06 23:00:29]     "pilotErrorDiag": "",
[2026-03-06 23:00:29]  *** Listing of results directory ***
[2026-03-06 23:00:29] total 510864
[2026-03-06 23:00:29] -rw-r--r-- 1 boinc boinc    584627 Mar  6 06:53 pilot3.tar.gz
[2026-03-06 23:00:29] -rwx------ 1 boinc boinc     36322 Mar  6 06:54 runpilot2-wrapper.sh
[2026-03-06 23:00:29] -rw-r--r-- 1 boinc boinc      5111 Mar  6 06:54 queuedata.json
[2026-03-06 23:00:29] -rw-r--r-- 1 boinc boinc       100 Mar  6 20:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 23:00:29] -rwxr-xr-x 1 boinc boinc      7986 Mar  6 20:00 run_atlas
[2026-03-06 23:00:29] -rw-r--r-- 1 boinc boinc       105 Mar  6 20:00 job.xml
[2026-03-06 23:00:29] -rw-r--r-- 2 boinc boinc 237139268 Mar  6 20:00 EVNT.48966948._000003.pool.root.1
[2026-03-06 23:00:29] -rw-r--r-- 2 boinc boinc    597933 Mar  6 20:00 input.tar.gz
[2026-03-06 23:00:29] -rw-r--r-- 2 boinc boinc     15845 Mar  6 20:00 start_atlas.sh
[2026-03-06 23:00:29] drwxrwx--x 2 boinc boinc      4096 Mar  6 20:00 shared
[2026-03-06 23:00:29] -rw-r--r-- 1 boinc boinc         0 Mar  6 20:00 boinc_setup_complete
[2026-03-06 23:00:29] -rw-r--r-- 1 boinc boinc      6449 Mar  6 20:00 init_data.xml
[2026-03-06 23:00:29] -rw-r--r-- 1 boinc boinc         0 Mar  6 20:00 boinc_lockfile
[2026-03-06 23:00:29] -rw-r--r-- 1 boinc boinc      2539 Mar  6 20:00 pandaJob.out
[2026-03-06 23:00:29] -rw------- 1 boinc boinc    999496 Mar  6 20:00 agis_schedconf.cvmfs.json
[2026-03-06 23:00:29] -rw------- 1 boinc boinc   1521291 Mar  6 20:00 agis_ddmendpoints.agis.ALL.json
[2026-03-06 23:00:29] -rw------- 1 boinc boinc       427 Mar  6 20:00 workernode_map.json
[2026-03-06 23:00:29] drwx------ 5 boinc boinc      4096 Mar  6 20:00 pilot3
[2026-03-06 23:00:29] -rw------- 1 boinc boinc        95 Mar  6 22:59 pilot_heartbeat.json
[2026-03-06 23:00:29] -rw------- 1 boinc boinc 278341733 Mar  6 22:59 HITS.48966951._000136.pool.root.1
[2026-03-06 23:00:29] -rw-r--r-- 1 boinc boinc       530 Mar  6 22:59 boinc_task_state.xml
[2026-03-06 23:00:29] -rw------- 1 boinc boinc      1014 Mar  6 22:59 memory_monitor_summary.json
[2026-03-06 23:00:29] -rw------- 1 boinc boinc    333073 Mar  6 22:59 log.48966951._000136.job.log.tgz.1
[2026-03-06 23:00:29] -rw------- 1 boinc boinc      6309 Mar  6 22:59 heartbeat.json
[2026-03-06 23:00:29] -rw-r--r-- 1 boinc boinc        28 Mar  6 23:00 wrapper_checkpoint.txt
[2026-03-06 23:00:29] -rw-r--r-- 1 boinc boinc      8192 Mar  6 23:00 boinc_mmap_file
[2026-03-06 23:00:29] -rw------- 1 boinc boinc      4626 Mar  6 23:00 pilotlog.txt
[2026-03-06 23:00:29] -rw------- 1 boinc boinc   1523637 Mar  6 23:00 log.48966951._000136.job.log.1
[2026-03-06 23:00:29] -rw------- 1 boinc boinc       357 Mar  6 23:00 output.list
[2026-03-06 23:00:29] -rw-r--r-- 1 boinc boinc       620 Mar  6 23:00 runtime_log
[2026-03-06 23:00:29] -rw------- 1 boinc boinc   1873920 Mar  6 23:00 result.tar.gz
[2026-03-06 23:00:29] -rw------- 1 boinc boinc       664 Mar  6 23:00 ynaLDmxJdI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmUSQLDmbPGZJn.diag
[2026-03-06 23:00:29] -rw-r--r-- 1 boinc boinc      8917 Mar  6 23:00 runtime_log.err
[2026-03-06 23:00:29] -rw-r--r-- 1 boinc boinc     10693 Mar  6 23:00 stderr.txt
[2026-03-06 23:00:29] HITS file was successfully produced:
[2026-03-06 23:00:29] -rw------- 1 boinc boinc 278341733 Mar  6 22:59 shared/HITS.pool.root.1
[2026-03-06 23:00:29]  *** Contents of shared directory: ***
[2026-03-06 23:00:29] total 505844
[2026-03-06 23:00:29] -rw-r--r-- 2 boinc boinc 237139268 Mar  6 20:00 ATLAS.root_0
[2026-03-06 23:00:29] -rw-r--r-- 2 boinc boinc    597933 Mar  6 20:00 input.tar.gz
[2026-03-06 23:00:29] -rw-r--r-- 2 boinc boinc     15845 Mar  6 20:00 start_atlas.sh
[2026-03-06 23:00:29] -rw------- 1 boinc boinc 278341733 Mar  6 22:59 HITS.pool.root.1
[2026-03-06 23:00:29] -rw------- 1 boinc boinc   1873920 Mar  6 23:00 result.tar.gz
23:00:31 (126676): run_atlas exited; CPU time 31374.014116
23:00:31 (126676): called boinc_finish(0)

</stderr_txt>
]]>

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