Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:09:38 (5154): wrapper (7.7.26015): starting
14:09:38 (5154): wrapper: running run_atlas (--nthreads 8)
[2026-03-06 14:09:38] Arguments: --nthreads 8
[2026-03-06 14:09:38] Threads: 8
[2026-03-06 14:09:38] Checking for CVMFS
[2026-03-06 14:09:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 14:09:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 14:09:38] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 14:09:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 14:09:38] 2.11.2.0 22482 116079 132928 156957 2 140 16698223 25165824 738 130560 163 42476340 99.848 28602740 1025 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-06 14:09:38] CVMFS is ok
[2026-03-06 14:09:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 14:09:38] Checking for apptainer binary...
[2026-03-06 14:09:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-06 14:09:38] Running /usr/bin/apptainer --version
[2026-03-06 14:09:38] apptainer version 1.3.2-1.el7
[2026-03-06 14:09:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 14:09:40] cg-vwn445.simple-grid.lan
[2026-03-06 14:09:40] apptainer works
[2026-03-06 14:09:40] Set ATHENA_PROC_NUMBER=8
[2026-03-06 14:09:40] Set ATHENA_CORE_NUMBER=8
[2026-03-06 14:09:40] Starting ATLAS job with PandaID=7038545865
[2026-03-06 14:09:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 18:08:53]  *** The last 200 lines of the pilot log: ***
[2026-03-06 18:08:53] 2026-03-06 17:08:13,548 | INFO     | total number of processed events: 400 (read)
[2026-03-06 18:08:53] 2026-03-06 17:08:13,551 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-7038545865/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 18:08:53] 2026-03-06 17:08:13,551 | INFO     | extracted standard info from prmon json
[2026-03-06 18:08:53] 2026-03-06 17:08:13,551 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 18:08:53] 2026-03-06 17:08:13,552 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 18:08:53] 2026-03-06 17:08:13,552 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 18:08:53] 2026-03-06 17:08:13,552 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 18:08:53] 2026-03-06 17:08:13,557 | INFO     | fitting pss+swap vs Time
[2026-03-06 18:08:53] 2026-03-06 17:08:13,557 | INFO     | sum of square deviations: 3972995422.5
[2026-03-06 18:08:53] 2026-03-06 17:08:13,559 | INFO     | sum of deviations: 16796934502.000017
[2026-03-06 18:08:53] 2026-03-06 17:08:13,559 | INFO     | mean x: 1772809731.5
[2026-03-06 18:08:53] 2026-03-06 17:08:13,559 | INFO     | mean y: 2476899.2136752135
[2026-03-06 18:08:53] 2026-03-06 17:08:13,560 | INFO     | intersect: -7492565449.910436
[2026-03-06 18:08:53] 2026-03-06 17:08:13,560 | INFO     | chi2: 2.2139192047672576
[2026-03-06 18:08:53] 2026-03-06 17:08:13,560 | INFO     | sum of square deviations: 3723716330.0
[2026-03-06 18:08:53] 2026-03-06 17:08:13,562 | INFO     | sum of deviations: 31843375977.000008
[2026-03-06 18:08:53] 2026-03-06 17:08:13,563 | INFO     | mean x: 1772809579.0
[2026-03-06 18:08:53] 2026-03-06 17:08:13,563 | INFO     | mean y: 2485939.847161572
[2026-03-06 18:08:53] 2026-03-06 17:08:13,563 | INFO     | intersect: -15157702688.088442
[2026-03-06 18:08:53] 2026-03-06 17:08:13,563 | INFO     | chi2: 1.4397140830402686
[2026-03-06 18:08:53] 2026-03-06 17:08:13,563 | INFO     | current chi2=1.4397140830402686 (change=34.96989050277373 %)
[2026-03-06 18:08:53] 2026-03-06 17:08:13,564 | INFO     | sum of square deviations: 3485088600.0
[2026-03-06 18:08:53] 2026-03-06 17:08:13,566 | INFO     | sum of deviations: 31102030258.5
[2026-03-06 18:08:53] 2026-03-06 17:08:13,566 | INFO     | mean x: 1772809426.5
[2026-03-06 18:08:53] 2026-03-06 17:08:13,566 | INFO     | mean y: 2485466.0848214286
[2026-03-06 18:08:53] 2026-03-06 17:08:13,566 | INFO     | intersect: -15818625201.103676
[2026-03-06 18:08:53] 2026-03-06 17:08:13,566 | INFO     | chi2: 1.4403465554987862
[2026-03-06 18:08:53] 2026-03-06 17:08:13,567 | INFO     | current chi2=1.4403465554987862 (change=-0.043930421044573315 %)
[2026-03-06 18:08:53] 2026-03-06 17:08:13,567 | INFO     | right removable region: 223
[2026-03-06 18:08:53] 2026-03-06 17:08:13,567 | INFO     | sum of square deviations: 3723716330.0
[2026-03-06 18:08:53] 2026-03-06 17:08:13,572 | INFO     | sum of deviations: -18255234967.0
[2026-03-06 18:08:53] 2026-03-06 17:08:13,572 | INFO     | mean x: 1772809884.0
[2026-03-06 18:08:53] 2026-03-06 17:08:13,572 | INFO     | mean y: 2498132.3362445417
[2026-03-06 18:08:53] 2026-03-06 17:08:13,573 | INFO     | intersect: 8693563217.908972
[2026-03-06 18:08:53] 2026-03-06 17:08:13,573 | INFO     | chi2: 0.802630995538649
[2026-03-06 18:08:53] 2026-03-06 17:08:13,573 | INFO     | current chi2=0.802630995538649 (change=63.74614783546145 %)
[2026-03-06 18:08:53] 2026-03-06 17:08:13,573 | INFO     | sum of square deviations: 3485088600.0
[2026-03-06 18:08:53] 2026-03-06 17:08:13,575 | INFO     | sum of deviations: -20304725502.5
[2026-03-06 18:08:53] 2026-03-06 17:08:13,575 | INFO     | mean x: 1772810036.5
[2026-03-06 18:08:53] 2026-03-06 17:08:13,575 | INFO     | mean y: 2499436.6026785714
[2026-03-06 18:08:53] 2026-03-06 17:08:13,575 | INFO     | intersect: 10331195573.398026
[2026-03-06 18:08:53] 2026-03-06 17:08:13,576 | INFO     | chi2: 0.7976425363857185
[2026-03-06 18:08:53] 2026-03-06 17:08:13,576 | INFO     | current chi2=0.7976425363857185 (change=0.6215133954031743 %)
[2026-03-06 18:08:53] 2026-03-06 17:08:13,576 | INFO     | left removable region: 20
[2026-03-06 18:08:53] 2026-03-06 17:08:13,576 | INFO     | sum of square deviations: 2593916542.0
[2026-03-06 18:08:53] 2026-03-06 17:08:13,578 | INFO     | sum of deviations: -5951052457.0
[2026-03-06 18:08:53] 2026-03-06 17:08:13,578 | INFO     | mean x: 1772810006.0
[2026-03-06 18:08:53] 2026-03-06 17:08:13,578 | INFO     | mean y: 2510154.6009852216
[2026-03-06 18:08:53] 2026-03-06 17:08:13,578 | INFO     | intersect: 4069751783.6882505
[2026-03-06 18:08:53] 2026-03-06 17:08:13,578 | INFO     | chi2: 0.004686976439156249
[2026-03-06 18:08:53] 2026-03-06 17:08:13,579 | INFO     | current memory leak: -2.29 B/s (using 203 data points, chi2=0.00)
[2026-03-06 18:08:53] 2026-03-06 17:08:13,579 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-06 18:08:53] 2026-03-06 17:08:13,579 | INFO     | ..............................
[2026-03-06 18:08:53] 2026-03-06 17:08:13,579 | INFO     | . Timing measurements:
[2026-03-06 18:08:53] 2026-03-06 17:08:13,580 | INFO     | . get job = 0 s
[2026-03-06 18:08:53] 2026-03-06 17:08:13,580 | INFO     | . initial setup = 9 s
[2026-03-06 18:08:53] 2026-03-06 17:08:13,580 | INFO     | . payload setup = 8 s
[2026-03-06 18:08:53] 2026-03-06 17:08:13,580 | INFO     | . stage-in = 0 s
[2026-03-06 18:08:53] 2026-03-06 17:08:13,580 | INFO     | . payload execution = 14265 s
[2026-03-06 18:08:53] 2026-03-06 17:08:13,580 | INFO     | . stage-out = 3 s
[2026-03-06 18:08:53] 2026-03-06 17:08:13,580 | INFO     | . log creation = 1 s
[2026-03-06 18:08:53] 2026-03-06 17:08:13,580 | INFO     | ..............................
[2026-03-06 18:08:53] 2026-03-06 17:08:14,052 | INFO     | 
[2026-03-06 18:08:53] 2026-03-06 17:08:14,052 | INFO     | job summary report
[2026-03-06 18:08:53] 2026-03-06 17:08:14,052 | INFO     | --------------------------------------------------
[2026-03-06 18:08:53] 2026-03-06 17:08:14,053 | INFO     | PanDA job id: 7038545865
[2026-03-06 18:08:53] 2026-03-06 17:08:14,053 | INFO     | task id: 48955010
[2026-03-06 18:08:53] 2026-03-06 17:08:14,053 | INFO     | errors: (none)
[2026-03-06 18:08:53] 2026-03-06 17:08:14,053 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 18:08:53] 2026-03-06 17:08:14,053 | INFO     | pilot state: finished 
[2026-03-06 18:08:53] 2026-03-06 17:08:14,053 | INFO     | transexitcode: 0
[2026-03-06 18:08:53] 2026-03-06 17:08:14,053 | INFO     | exeerrorcode: 0
[2026-03-06 18:08:53] 2026-03-06 17:08:14,053 | INFO     | exeerrordiag: 
[2026-03-06 18:08:53] 2026-03-06 17:08:14,053 | INFO     | exitcode: 0
[2026-03-06 18:08:53] 2026-03-06 17:08:14,053 | INFO     | exitmsg: OK
[2026-03-06 18:08:53] 2026-03-06 17:08:14,054 | INFO     | cpuconsumptiontime: 53811 s
[2026-03-06 18:08:53] 2026-03-06 17:08:14,054 | INFO     | nevents: 400
[2026-03-06 18:08:53] 2026-03-06 17:08:14,054 | INFO     | neventsw: 0
[2026-03-06 18:08:53] 2026-03-06 17:08:14,054 | INFO     | pid: 13316
[2026-03-06 18:08:53] 2026-03-06 17:08:14,054 | INFO     | pgrp: 13316
[2026-03-06 18:08:53] 2026-03-06 17:08:14,054 | INFO     | corecount: 8
[2026-03-06 18:08:53] 2026-03-06 17:08:14,054 | INFO     | event service: False
[2026-03-06 18:08:53] 2026-03-06 17:08:14,054 | INFO     | sizes: {0: 2295318, 1: 2295779, 14278: 2326432, 14279: 2326431, 14283: 2335487, 14284: 2335543, 14285: 2335865}
[2026-03-06 18:08:53] 2026-03-06 17:08:14,054 | INFO     | --------------------------------------------------
[2026-03-06 18:08:53] 2026-03-06 17:08:14,054 | INFO     | 
[2026-03-06 18:08:53] 2026-03-06 17:08:14,054 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-03-06 18:08:53] 2026-03-06 17:08:14,078 | INFO     | time since job start (14287s) is within the limit (349056.0s)
[2026-03-06 18:08:53] 2026-03-06 17:08:14,598 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 18:08:53] 2026-03-06 17:08:14,598 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 18:08:53] 2026-03-06 17:08:14,598 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 18:08:53] 2026-03-06 17:08:14,598 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 18:08:53] 2026-03-06 17:08:14,598 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 18:08:53] 2026-03-06 17:08:14,598 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 18:08:53] 2026-03-06 17:08:14,598 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 18:08:53] 2026-03-06 17:08:14,599 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 18:08:53] 2026-03-06 17:08:14,599 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 18:08:53] 2026-03-06 17:08:14,599 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 18:08:53] 2026-03-06 17:08:14,599 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 18:08:53] 2026-03-06 17:08:14,599 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 18:08:53] 2026-03-06 17:08:14,599 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 18:08:53] 2026-03-06 17:08:14,599 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 18:08:53] 2026-03-06 17:08:14,599 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 18:08:53] 2026-03-06 17:08:14,599 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 18:08:53] 2026-03-06 17:08:14,599 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 18:08:53] 2026-03-06 17:08:14,600 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 18:08:53] 2026-03-06 17:08:14,600 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 18:08:53] 2026-03-06 17:08:14,600 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 18:08:53] 2026-03-06 17:08:14,600 | INFO     | job 7038545865 has completed (purged errors)
[2026-03-06 18:08:53] 2026-03-06 17:08:14,600 | INFO     | overall cleanup function is called
[2026-03-06 18:08:53] 2026-03-06 17:08:15,609 | INFO     | --- collectZombieJob: --- 10, [13316]
[2026-03-06 18:08:53] 2026-03-06 17:08:15,609 | INFO     | zombie collector waiting for pid 13316
[2026-03-06 18:08:53] 2026-03-06 17:08:15,609 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 18:08:53] 2026-03-06 17:08:15,610 | INFO     | collected zombie processes
[2026-03-06 18:08:53] 2026-03-06 17:08:15,610 | INFO     | will attempt to kill all subprocesses of pid=13316
[2026-03-06 18:08:53] 2026-03-06 17:08:15,704 | INFO     | process IDs to be killed: [13316] (in reverse order)
[2026-03-06 18:08:53] 2026-03-06 17:08:16,462 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 18:08:53] 2026-03-06 17:08:16,462 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 18:08:53] 2026-03-06 17:08:16,464 | INFO     | did not find any defunct processes belonging to 13316
[2026-03-06 18:08:53] 2026-03-06 17:08:16,466 | INFO     | did not find any defunct processes belonging to 13316
[2026-03-06 18:08:53] 2026-03-06 17:08:16,466 | INFO     | ready for new job
[2026-03-06 18:08:53] 2026-03-06 17:08:16,467 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 18:08:53] 2026-03-06 17:08:16,469 | INFO     | **************************************
[2026-03-06 18:08:53] 2026-03-06 17:08:16,469 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 18:08:53] 2026-03-06 17:08:16,469 | INFO     | **************************************
[2026-03-06 18:08:53] 2026-03-06 17:08:16,469 | INFO     | 
[2026-03-06 18:08:53] 2026-03-06 17:08:16,470 | INFO     | pilot is running in a VM
[2026-03-06 18:08:53] 2026-03-06 17:08:16,470 | INFO     | architecture information:
[2026-03-06 18:08:53] 2026-03-06 17:08:16,475 | INFO     | executing command: cat /etc/os-release
[2026-03-06 18:08:53] 2026-03-06 17:08:16,824 | INFO     | cat /etc/os-release:
[2026-03-06 18:08:53] NAME="CentOS Linux"
[2026-03-06 18:08:53] VERSION="7 (Core)"
[2026-03-06 18:08:53] ID="centos"
[2026-03-06 18:08:53] ID_LIKE="rhel fedora"
[2026-03-06 18:08:53] VERSION_ID="7"
[2026-03-06 18:08:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 18:08:53] ANSI_COLOR="0;31"
[2026-03-06 18:08:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 18:08:53] HOME_URL="https://www.centos.org/"
[2026-03-06 18:08:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 18:08:53] 
[2026-03-06 18:08:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 18:08:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 18:08:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 18:08:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 18:08:53] 
[2026-03-06 18:08:53] 2026-03-06 17:08:16,825 | INFO     | **************************************
[2026-03-06 18:08:53] 2026-03-06 17:08:17,328 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-03-06 18:08:53] 2026-03-06 17:08:17,499 | INFO     | sufficient remaining disk space (495708012544 B)
[2026-03-06 18:08:53] 2026-03-06 17:08:17,499 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 18:08:53] 2026-03-06 17:08:17,499 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 18:08:53] 2026-03-06 17:08:17,499 | INFO     | update_server=False
[2026-03-06 18:08:53] 2026-03-06 17:08:17,499 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 18:08:53] 2026-03-06 17:08:17,500 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 18:08:53] 2026-03-06 17:08:18,024 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 18:08:53] 2026-03-06 17:08:18,189 | INFO     | all data control threads have been joined
[2026-03-06 18:08:53] 2026-03-06 17:08:18,305 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 18:08:53] 2026-03-06 17:08:18,305 | INFO     | aborting loop
[2026-03-06 18:08:53] 2026-03-06 17:08:18,504 | INFO     | [job] retrieve thread has finished
[2026-03-06 18:08:53] 2026-03-06 17:08:18,586 | INFO     | all job control threads have been joined
[2026-03-06 18:08:53] 2026-03-06 17:08:18,596 | INFO     | [payload] failed_post thread has finished
[2026-03-06 18:08:53] 2026-03-06 17:08:18,668 | INFO     | [data] copytool_in thread has finished
[2026-03-06 18:08:53] 2026-03-06 17:08:18,744 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 18:08:53] 2026-03-06 17:08:18,836 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 18:08:53] 2026-03-06 17:08:18,971 | INFO     | all payload control threads have been joined
[2026-03-06 18:08:53] 2026-03-06 17:08:19,038 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 18:08:53] 2026-03-06 17:08:19,195 | INFO     | [data] control thread has finished
[2026-03-06 18:08:53] 2026-03-06 17:08:19,261 | INFO     | [payload] validate_post thread has finished
[2026-03-06 18:08:53] 2026-03-06 17:08:19,311 | INFO     | [job] job monitor thread has finished
[2026-03-06 18:08:53] 2026-03-06 17:08:19,376 | INFO     | [job] validate thread has finished
[2026-03-06 18:08:53] 2026-03-06 17:08:19,507 | INFO     | [data] copytool_out thread has finished
[2026-03-06 18:08:53] 2026-03-06 17:08:19,535 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 18:08:53] 2026-03-06 17:08:19,591 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 18:08:53] 2026-03-06 17:08:19,592 | INFO     | [job] control thread has finished
[2026-03-06 18:08:53] 2026-03-06 17:08:19,750 | INFO     | [job] queue monitor thread has finished
[2026-03-06 18:08:53] 2026-03-06 17:08:19,977 | INFO     | [payload] control thread has finished
[2026-03-06 18:08:53] 2026-03-06 17:08:22,038 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 18:08:53] 2026-03-06 17:08:31,385 | INFO     | [monitor] cgroup control has ended
[2026-03-06 18:08:53] 2026-03-06 17:08:31,499 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140286845511488)>', '<ExcThread(monitor, started 140286088955648)>']
[2026-03-06 18:08:53] 2026-03-06 17:08:36,525 | INFO     | all workflow threads have been joined
[2026-03-06 18:08:53] 2026-03-06 17:08:36,525 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 18:08:53] 2026-03-06 17:08:36,526 | INFO     | traces error code: 0
[2026-03-06 18:08:53] 2026-03-06 17:08:36,526 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 18:08:53] 2026-03-06 17:08:47,220 | INFO     | PID=8871 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-06 18:08:53] 2026-03-06 17:08:47,221 | INFO     | .. there are 2 such processes running
[2026-03-06 18:08:53] 2026-03-06 17:08:47,221 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 18:08:53] 2026-03-06 17:08:47,221 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 18:08:53] 2026-03-06 17:08:47,221 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 18:08:53] 2026-03-06 17:08:47,221 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 18:08:53] 2026-03-06 17:08:47,221 | CRITICAL | thread 'MainThread' is not alive
[2026-03-06 18:08:53] 2026-03-06 17:08:47,221 | INFO     | [monitor] control thread has ended
[2026-03-06 18:08:53] 2026-03-06 17:08:47,769 [wrapper] ==== pilot stdout END ====
[2026-03-06 18:08:53] 2026-03-06 17:08:47,884 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 18:08:53] 2026-03-06 17:08:47,994 [wrapper] pilotpid: 8871
[2026-03-06 18:08:53] 2026-03-06 17:08:48,107 [wrapper] Pilot exit status: 0
[2026-03-06 18:08:53] 2026-03-06 17:08:48,591 [wrapper] pandaids: 7038545865
[2026-03-06 18:08:53] 2026-03-06 17:08:49,593 [wrapper] cleanup supervisor_pilot 19799 8872
[2026-03-06 18:08:53] 2026-03-06 17:08:49,728 [wrapper] Test setup, not cleaning
[2026-03-06 18:08:53] 2026-03-06 17:08:49,849 [wrapper] apfmon messages muted
[2026-03-06 18:08:53] 2026-03-06 17:08:49,964 [wrapper] ==== wrapper stdout END ====
[2026-03-06 18:08:53] 2026-03-06 17:08:50,092 [wrapper] ==== wrapper stderr END ====
[2026-03-06 18:08:53]  *** Error codes and diagnostics ***
[2026-03-06 18:08:53]     "exeErrorCode": 0,
[2026-03-06 18:08:53]     "exeErrorDiag": "",
[2026-03-06 18:08:53]     "pilotErrorCode": 0,
[2026-03-06 18:08:53]     "pilotErrorDiag": "",
[2026-03-06 18:08:53]  *** Listing of results directory ***
[2026-03-06 18:08:53] total 623944
[2026-03-06 18:08:53] -rw-r--r--. 1 boinc boinc    584627 Mar  5 01:15 pilot3.tar.gz
[2026-03-06 18:08:53] -rw-r--r--. 1 boinc boinc      5111 Mar  5 01:15 queuedata.json
[2026-03-06 18:08:53] -rwx------. 1 boinc boinc     36322 Mar  5 01:16 runpilot2-wrapper.sh
[2026-03-06 18:08:53] -rw-r--r--. 1 boinc boinc       100 Mar  6 14:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 18:08:53] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 14:09 run_atlas
[2026-03-06 18:08:53] -rw-r--r--. 1 boinc boinc       105 Mar  6 14:09 job.xml
[2026-03-06 18:08:53] -rw-r--r--. 2 boinc boinc 441177188 Mar  6 14:09 EVNT.46701403._001070.pool.root.1
[2026-03-06 18:08:53] -rw-r--r--. 2 boinc boinc    597954 Mar  6 14:09 input.tar.gz
[2026-03-06 18:08:53] -rw-r--r--. 1 boinc boinc      6392 Mar  6 14:09 init_data.xml
[2026-03-06 18:08:53] -rw-r--r--. 2 boinc boinc     15845 Mar  6 14:09 start_atlas.sh
[2026-03-06 18:08:53] drwxrwx--x. 2 boinc boinc        68 Mar  6 14:09 shared
[2026-03-06 18:08:53] -rw-r--r--. 1 boinc boinc         0 Mar  6 14:09 boinc_lockfile
[2026-03-06 18:08:53] -rw-r--r--. 1 boinc boinc      2561 Mar  6 14:09 pandaJob.out
[2026-03-06 18:08:53] -rw-------. 1 boinc boinc    998899 Mar  6 14:09 agis_schedconf.cvmfs.json
[2026-03-06 18:08:53] -rw-------. 1 boinc boinc       415 Mar  6 14:10 workernode_map.json
[2026-03-06 18:08:53] drwx------. 5 boinc boinc      4096 Mar  6 14:10 pilot3
[2026-03-06 18:08:53] -rw-------. 1 boinc boinc 188840210 Mar  6 18:06 HITS.48955010._003483.pool.root.1
[2026-03-06 18:08:53] -rw-r--r--. 1 boinc boinc       531 Mar  6 18:07 boinc_task_state.xml
[2026-03-06 18:08:53] -rw-------. 1 boinc boinc        95 Mar  6 18:07 pilot_heartbeat.json
[2026-03-06 18:08:53] -rw-------. 1 boinc boinc      1011 Mar  6 18:08 memory_monitor_summary.json
[2026-03-06 18:08:53] -rw-------. 1 boinc boinc   1521291 Mar  6 18:08 agis_ddmendpoints.agis.ALL.json
[2026-03-06 18:08:53] -rw-------. 1 boinc boinc    486668 Mar  6 18:08 log.48955010._003483.job.log.tgz.1
[2026-03-06 18:08:53] -rw-------. 1 boinc boinc      6316 Mar  6 18:08 heartbeat.json
[2026-03-06 18:08:53] -rw-r--r--. 1 boinc boinc      8192 Mar  6 18:08 boinc_mmap_file
[2026-03-06 18:08:53] -rw-r--r--. 1 boinc boinc        28 Mar  6 18:08 wrapper_checkpoint.txt
[2026-03-06 18:08:53] -rw-------. 1 boinc boinc       889 Mar  6 18:08 pilotlog.txt
[2026-03-06 18:08:53] -rw-------. 1 boinc boinc   2003824 Mar  6 18:08 log.48955010._003483.job.log.1
[2026-03-06 18:08:53] -rw-------. 1 boinc boinc       357 Mar  6 18:08 output.list
[2026-03-06 18:08:53] -rw-r--r--. 1 boinc boinc       620 Mar  6 18:08 runtime_log
[2026-03-06 18:08:53] -rw-------. 1 boinc boinc   2508800 Mar  6 18:08 result.tar.gz
[2026-03-06 18:08:53] -rw-r--r--. 1 boinc boinc      8832 Mar  6 18:08 runtime_log.err
[2026-03-06 18:08:53] -rw-------. 1 boinc boinc       656 Mar  6 18:08 NFJKDm4YBI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmoOMLDm3gvC7m.diag
[2026-03-06 18:08:53] -rw-r--r--. 1 boinc boinc     20698 Mar  6 18:08 stderr.txt
[2026-03-06 18:08:53] HITS file was successfully produced:
[2026-03-06 18:08:53] -rw-------. 1 boinc boinc 188840210 Mar  6 18:06 shared/HITS.pool.root.1
[2026-03-06 18:08:53]  *** Contents of shared directory: ***
[2026-03-06 18:08:53] total 618308
[2026-03-06 18:08:53] -rw-r--r--. 2 boinc boinc 441177188 Mar  6 14:09 ATLAS.root_0
[2026-03-06 18:08:53] -rw-r--r--. 2 boinc boinc    597954 Mar  6 14:09 input.tar.gz
[2026-03-06 18:08:53] -rw-r--r--. 2 boinc boinc     15845 Mar  6 14:09 start_atlas.sh
[2026-03-06 18:08:53] -rw-------. 1 boinc boinc 188840210 Mar  6 18:06 HITS.pool.root.1
[2026-03-06 18:08:53] -rw-------. 1 boinc boinc   2508800 Mar  6 18:08 result.tar.gz
18:08:55 (5154): run_atlas exited; CPU time 53957.854911
18:08:55 (5154): called boinc_finish(0)

</stderr_txt>
]]>

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