Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:14:59 (2540912): wrapper (7.7.26015): starting
00:14:59 (2540912): wrapper: running run_atlas (--nthreads 10)
[2026-03-06 00:14:59] Arguments: --nthreads 10
[2026-03-06 00:14:59] Threads: 10
[2026-03-06 00:14:59] Checking for CVMFS
[2026-03-06 00:14:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 00:15:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 00:15:00] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 00:15:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 00:15:01] 2.13.3.0 10074 102326 144452 156945 0 59 34979732 39288833 7408 16776704 0 57795045 99.582 67892460 35562 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-06 00:15:01] CVMFS is ok
[2026-03-06 00:15:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 00:15:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 00:15:01] Further information can be found at the LHC@home message board.
[2026-03-06 00:15:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 00:15:01] Checking for apptainer binary...
[2026-03-06 00:15:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-06 00:15:01] Running /usr/bin/apptainer --version
[2026-03-06 00:15:01] apptainer version 1.4.5-2.el9
[2026-03-06 00:15:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 00:15:02] c-210-29.aglt2.org
[2026-03-06 00:15:02] apptainer works
[2026-03-06 00:15:02] Set ATHENA_PROC_NUMBER=10
[2026-03-06 00:15:02] Set ATHENA_CORE_NUMBER=10
[2026-03-06 00:15:03] Starting ATLAS job with PandaID=7038697107
[2026-03-06 00:15:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 05:30:15]  *** The last 200 lines of the pilot log: ***
[2026-03-06 05:30:15] 2026-03-06 10:29:07,802 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-06 05:30:15] 2026-03-06 10:29:07,802 | INFO     | log transfer has been attempted: DONE
[2026-03-06 05:30:15] 2026-03-06 10:29:07,802 | INFO     | job 7038697107 has finished - writing final server update
[2026-03-06 05:30:15] 2026-03-06 10:29:07,802 | INFO     | total number of processed events: 400 (read)
[2026-03-06 05:30:15] 2026-03-06 10:29:07,871 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7038697107/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 05:30:15] 2026-03-06 10:29:07,872 | INFO     | extracted standard info from prmon json
[2026-03-06 05:30:15] 2026-03-06 10:29:07,872 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 05:30:15] 2026-03-06 10:29:07,872 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 05:30:15] 2026-03-06 10:29:07,896 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 05:30:15] 2026-03-06 10:29:07,897 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 05:30:15] 2026-03-06 10:29:07,923 | INFO     | fitting pss+swap vs Time
[2026-03-06 05:30:15] 2026-03-06 10:29:07,923 | INFO     | sum of square deviations: 8795786221.19994
[2026-03-06 05:30:15] 2026-03-06 10:29:07,962 | INFO     | sum of deviations: 50481752596.79998
[2026-03-06 05:30:15] 2026-03-06 10:29:07,963 | INFO     | mean x: 1772783631.6
[2026-03-06 05:30:15] 2026-03-06 10:29:07,963 | INFO     | mean y: 2568865.006557377
[2026-03-06 05:30:15] 2026-03-06 10:29:07,963 | INFO     | intersect: -10171987729.193949
[2026-03-06 05:30:15] 2026-03-06 10:29:07,963 | INFO     | chi2: 6.338100030913043
[2026-03-06 05:30:15] 2026-03-06 10:29:07,964 | INFO     | sum of square deviations: 8370289860.436649
[2026-03-06 05:30:15] 2026-03-06 10:29:07,976 | INFO     | sum of deviations: 89599848043.16676
[2026-03-06 05:30:15] 2026-03-06 10:29:07,976 | INFO     | mean x: 1772783479.1233332
[2026-03-06 05:30:15] 2026-03-06 10:29:07,976 | INFO     | mean y: 2582740.8333333335
[2026-03-06 05:30:15] 2026-03-06 10:29:07,976 | INFO     | intersect: -18974195004.185043
[2026-03-06 05:30:15] 2026-03-06 10:29:07,977 | INFO     | chi2: 4.990494332624116
[2026-03-06 05:30:15] 2026-03-06 10:29:07,977 | INFO     | current chi2=4.990494332624116 (change=21.261982166835505 %)
[2026-03-06 05:30:15] 2026-03-06 10:29:07,977 | INFO     | right removable region: 299
[2026-03-06 05:30:15] 2026-03-06 10:29:07,977 | INFO     | sum of square deviations: 8370047631.679959
[2026-03-06 05:30:15] 2026-03-06 10:29:08,000 | INFO     | sum of deviations: -43111192665.32004
[2026-03-06 05:30:15] 2026-03-06 10:29:08,000 | INFO     | mean x: 1772783784.12
[2026-03-06 05:30:15] 2026-03-06 10:29:08,001 | INFO     | mean y: 2602337.12
[2026-03-06 05:30:15] 2026-03-06 10:29:08,001 | INFO     | intersect: 9133592581.65374
[2026-03-06 05:30:15] 2026-03-06 10:29:08,001 | INFO     | chi2: 2.9188347067522877
[2026-03-06 05:30:15] 2026-03-06 10:29:08,001 | INFO     | current chi2=2.9188347067522877 (change=53.947796776381715 %)
[2026-03-06 05:30:15] 2026-03-06 10:29:08,002 | INFO     | sum of square deviations: 7958372961.47795
[2026-03-06 05:30:15] 2026-03-06 10:29:08,023 | INFO     | sum of deviations: -87188480626.52539
[2026-03-06 05:30:15] 2026-03-06 10:29:08,024 | INFO     | mean x: 1772783936.620339
[2026-03-06 05:30:15] 2026-03-06 10:29:08,024 | INFO     | mean y: 2618608.254237288
[2026-03-06 05:30:15] 2026-03-06 10:29:08,024 | INFO     | intersect: 19424470117.50209
[2026-03-06 05:30:15] 2026-03-06 10:29:08,025 | INFO     | chi2: 2.058004454362452
[2026-03-06 05:30:15] 2026-03-06 10:29:08,025 | INFO     | current chi2=2.058004454362452 (change=29.492257660169436 %)
[2026-03-06 05:30:15] 2026-03-06 10:29:08,025 | INFO     | sum of square deviations: 7560456079.244841
[2026-03-06 05:30:15] 2026-03-06 10:29:08,054 | INFO     | sum of deviations: -103880028488.40344
[2026-03-06 05:30:15] 2026-03-06 10:29:08,054 | INFO     | mean x: 1772784089.1137931
[2026-03-06 05:30:15] 2026-03-06 10:29:08,054 | INFO     | mean y: 2624993.375862069
[2026-03-06 05:30:15] 2026-03-06 10:29:08,054 | INFO     | intersect: 24360528769.377068
[2026-03-06 05:30:15] 2026-03-06 10:29:08,055 | INFO     | chi2: 1.9056155845580727
[2026-03-06 05:30:15] 2026-03-06 10:29:08,055 | INFO     | current chi2=1.9056155845580727 (change=7.404690960768004 %)
[2026-03-06 05:30:15] 2026-03-06 10:29:08,055 | INFO     | left removable region: 30
[2026-03-06 05:30:15] 2026-03-06 10:29:08,055 | INFO     | sum of square deviations: 6033992723.197045
[2026-03-06 05:30:15] 2026-03-06 10:29:08,090 | INFO     | sum of deviations: -58534498186.76952
[2026-03-06 05:30:15] 2026-03-06 10:29:08,101 | INFO     | mean x: 1772784363.5873606
[2026-03-06 05:30:15] 2026-03-06 10:29:08,102 | INFO     | mean y: 2638037.4795539035
[2026-03-06 05:30:15] 2026-03-06 10:29:08,102 | INFO     | intersect: 17200047427.286842
[2026-03-06 05:30:15] 2026-03-06 10:29:08,102 | INFO     | chi2: 0.4001595509036917
[2026-03-06 05:30:15] 2026-03-06 10:29:08,102 | INFO     | current memory leak: -9.70 B/s (using 269 data points, chi2=0.40)
[2026-03-06 05:30:15] 2026-03-06 10:29:08,103 | INFO     | could have reported an average CPU frequency of 2600 MHz (14 samples)
[2026-03-06 05:30:15] 2026-03-06 10:29:08,103 | INFO     | ..............................
[2026-03-06 05:30:15] 2026-03-06 10:29:08,103 | INFO     | . Timing measurements:
[2026-03-06 05:30:15] 2026-03-06 10:29:08,103 | INFO     | . get job = 1 s
[2026-03-06 05:30:15] 2026-03-06 10:29:08,103 | INFO     | . initial setup = 50 s
[2026-03-06 05:30:15] 2026-03-06 10:29:08,104 | INFO     | . payload setup = 64 s
[2026-03-06 05:30:15] 2026-03-06 10:29:08,104 | INFO     | . stage-in = 1 s
[2026-03-06 05:30:15] 2026-03-06 10:29:08,104 | INFO     | . payload execution = 18609 s
[2026-03-06 05:30:15] 2026-03-06 10:29:08,104 | INFO     | . stage-out = 6 s
[2026-03-06 05:30:15] 2026-03-06 10:29:08,104 | INFO     | . log creation = 1 s
[2026-03-06 05:30:15] 2026-03-06 10:29:08,104 | INFO     | ..............................
[2026-03-06 05:30:15] 2026-03-06 10:29:08,919 | INFO     | 
[2026-03-06 05:30:15] 2026-03-06 10:29:08,919 | INFO     | job summary report
[2026-03-06 05:30:15] 2026-03-06 10:29:08,920 | INFO     | --------------------------------------------------
[2026-03-06 05:30:15] 2026-03-06 10:29:08,920 | INFO     | PanDA job id: 7038697107
[2026-03-06 05:30:15] 2026-03-06 10:29:08,920 | INFO     | task id: 48955006
[2026-03-06 05:30:15] 2026-03-06 10:29:08,920 | INFO     | errors: (none)
[2026-03-06 05:30:15] 2026-03-06 10:29:08,920 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 05:30:15] 2026-03-06 10:29:08,920 | INFO     | pilot state: finished 
[2026-03-06 05:30:15] 2026-03-06 10:29:08,920 | INFO     | transexitcode: 0
[2026-03-06 05:30:15] 2026-03-06 10:29:08,920 | INFO     | exeerrorcode: 0
[2026-03-06 05:30:15] 2026-03-06 10:29:08,920 | INFO     | exeerrordiag: 
[2026-03-06 05:30:15] 2026-03-06 10:29:08,921 | INFO     | exitcode: 0
[2026-03-06 05:30:15] 2026-03-06 10:29:08,921 | INFO     | exitmsg: OK
[2026-03-06 05:30:15] 2026-03-06 10:29:08,921 | INFO     | cpuconsumptiontime: 44677 s
[2026-03-06 05:30:15] 2026-03-06 10:29:08,921 | INFO     | nevents: 400
[2026-03-06 05:30:15] 2026-03-06 10:29:08,921 | INFO     | neventsw: 0
[2026-03-06 05:30:15] 2026-03-06 10:29:08,921 | INFO     | pid: 2552051
[2026-03-06 05:30:15] 2026-03-06 10:29:08,921 | INFO     | pgrp: 2552051
[2026-03-06 05:30:15] 2026-03-06 10:29:08,921 | INFO     | corecount: 10
[2026-03-06 05:30:15] 2026-03-06 10:29:08,921 | INFO     | event service: False
[2026-03-06 05:30:15] 2026-03-06 10:29:08,922 | INFO     | sizes: {0: 2295314, 1: 2295398, 3: 2295859, 4: 2295859, 18678: 2328794, 18680: 2328793, 18687: 2337975, 18691: 2338031, 18692: 2338225}
[2026-03-06 05:30:15] 2026-03-06 10:29:08,922 | INFO     | --------------------------------------------------
[2026-03-06 05:30:15] 2026-03-06 10:29:08,922 | INFO     | 
[2026-03-06 05:30:15] 2026-03-06 10:29:08,922 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-06 05:30:15] 2026-03-06 10:29:09,167 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 05:30:15] 2026-03-06 10:29:09,168 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 05:30:15] 2026-03-06 10:29:09,168 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 05:30:15] 2026-03-06 10:29:09,168 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 05:30:15] 2026-03-06 10:29:09,168 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 05:30:15] 2026-03-06 10:29:09,168 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 05:30:15] 2026-03-06 10:29:09,168 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 05:30:15] 2026-03-06 10:29:09,169 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 05:30:15] 2026-03-06 10:29:09,169 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 05:30:15] 2026-03-06 10:29:09,169 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 05:30:15] 2026-03-06 10:29:09,169 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 05:30:15] 2026-03-06 10:29:09,169 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 05:30:15] 2026-03-06 10:29:09,169 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 05:30:15] 2026-03-06 10:29:09,169 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 05:30:15] 2026-03-06 10:29:09,169 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 05:30:15] 2026-03-06 10:29:09,169 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 05:30:15] 2026-03-06 10:29:09,170 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 05:30:15] 2026-03-06 10:29:09,170 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 05:30:15] 2026-03-06 10:29:09,170 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 05:30:15] 2026-03-06 10:29:09,170 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 05:30:15] 2026-03-06 10:29:09,170 | INFO     | job 7038697107 has completed (purged errors)
[2026-03-06 05:30:15] 2026-03-06 10:29:09,171 | INFO     | overall cleanup function is called
[2026-03-06 05:30:15] 2026-03-06 10:29:10,220 | INFO     | --- collectZombieJob: --- 10, [2552051]
[2026-03-06 05:30:15] 2026-03-06 10:29:10,220 | INFO     | zombie collector waiting for pid 2552051
[2026-03-06 05:30:15] 2026-03-06 10:29:10,221 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 05:30:15] 2026-03-06 10:29:10,221 | INFO     | collected zombie processes
[2026-03-06 05:30:15] 2026-03-06 10:29:10,221 | INFO     | will attempt to kill all subprocesses of pid=2552051
[2026-03-06 05:30:15] 2026-03-06 10:29:12,664 | INFO     | process IDs to be killed: [2552051] (in reverse order)
[2026-03-06 05:30:15] 2026-03-06 10:29:13,647 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 05:30:15] 2026-03-06 10:29:13,647 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 05:30:15] 2026-03-06 10:29:13,773 | INFO     | did not find any defunct processes belonging to 2552051
[2026-03-06 05:30:15] 2026-03-06 10:29:13,849 | INFO     | did not find any defunct processes belonging to 2552051
[2026-03-06 05:30:15] 2026-03-06 10:29:13,850 | INFO     | ready for new job
[2026-03-06 05:30:15] 2026-03-06 10:29:13,850 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 05:30:15] 2026-03-06 10:29:13,868 | INFO     | **************************************
[2026-03-06 05:30:15] 2026-03-06 10:29:13,868 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 05:30:15] 2026-03-06 10:29:13,868 | INFO     | **************************************
[2026-03-06 05:30:15] 2026-03-06 10:29:13,869 | INFO     | 
[2026-03-06 05:30:15] 2026-03-06 10:29:13,901 | INFO     | architecture information:
[2026-03-06 05:30:15] 2026-03-06 10:29:13,909 | INFO     | executing command: cat /etc/os-release
[2026-03-06 05:30:15] 2026-03-06 10:29:14,101 | INFO     | cat /etc/os-release:
[2026-03-06 05:30:15] NAME="CentOS Linux"
[2026-03-06 05:30:15] VERSION="7 (Core)"
[2026-03-06 05:30:15] ID="centos"
[2026-03-06 05:30:15] ID_LIKE="rhel fedora"
[2026-03-06 05:30:15] VERSION_ID="7"
[2026-03-06 05:30:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 05:30:15] ANSI_COLOR="0;31"
[2026-03-06 05:30:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 05:30:15] HOME_URL="https://www.centos.org/"
[2026-03-06 05:30:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 05:30:15] 
[2026-03-06 05:30:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 05:30:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 05:30:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 05:30:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 05:30:15] 
[2026-03-06 05:30:15] 2026-03-06 10:29:14,102 | INFO     | **************************************
[2026-03-06 05:30:15] 2026-03-06 10:29:14,604 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-06 05:30:15] 2026-03-06 10:29:14,717 | INFO     | sufficient remaining disk space (52446625792 B)
[2026-03-06 05:30:15] 2026-03-06 10:29:14,717 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 05:30:15] 2026-03-06 10:29:14,717 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 05:30:15] 2026-03-06 10:29:14,717 | INFO     | update_server=False
[2026-03-06 05:30:15] 2026-03-06 10:29:14,717 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 05:30:15] 2026-03-06 10:29:14,725 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 05:30:15] 2026-03-06 10:29:14,725 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 05:30:15] 2026-03-06 10:29:14,726 | INFO     | aborting loop
[2026-03-06 05:30:15] 2026-03-06 10:29:14,883 | INFO     | all data control threads have been joined
[2026-03-06 05:30:15] 2026-03-06 10:29:14,885 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 05:30:15] 2026-03-06 10:29:15,182 | INFO     | all payload control threads have been joined
[2026-03-06 05:30:15] 2026-03-06 10:29:15,283 | INFO     | all job control threads have been joined
[2026-03-06 05:30:15] 2026-03-06 10:29:15,723 | INFO     | [job] retrieve thread has finished
[2026-03-06 05:30:15] 2026-03-06 10:29:15,731 | INFO     | [job] job monitor thread has finished
[2026-03-06 05:30:15] 2026-03-06 10:29:15,740 | INFO     | [job] queue monitor thread has finished
[2026-03-06 05:30:15] 2026-03-06 10:29:15,854 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 05:30:15] 2026-03-06 10:29:15,889 | INFO     | [data] control thread has finished
[2026-03-06 05:30:15] 2026-03-06 10:29:15,891 | INFO     | [job] validate thread has finished
[2026-03-06 05:30:15] 2026-03-06 10:29:16,056 | INFO     | [payload] validate_post thread has finished
[2026-03-06 05:30:15] 2026-03-06 10:29:16,188 | INFO     | [payload] control thread has finished
[2026-03-06 05:30:15] 2026-03-06 10:29:16,289 | INFO     | [job] control thread has finished
[2026-03-06 05:30:15] 2026-03-06 10:29:16,333 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 05:30:15] 2026-03-06 10:29:16,390 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 05:30:15] 2026-03-06 10:29:16,838 | INFO     | [data] copytool_in thread has finished
[2026-03-06 05:30:15] 2026-03-06 10:29:16,844 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 05:30:15] 2026-03-06 10:29:16,892 | INFO     | [data] copytool_out thread has finished
[2026-03-06 05:30:15] 2026-03-06 10:29:17,212 | INFO     | [payload] failed_post thread has finished
[2026-03-06 05:30:15] 2026-03-06 10:29:18,143 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 05:30:15] 2026-03-06 10:29:22,189 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 05:30:15] 2026-03-06 10:29:41,389 | INFO     | PID=2545347 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 05:30:15] 2026-03-06 10:29:41,390 | INFO     | .. there are 7 such processes running
[2026-03-06 05:30:15] 2026-03-06 10:29:41,390 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 05:30:15] 2026-03-06 10:29:41,390 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 05:30:15] 2026-03-06 10:29:41,390 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 05:30:15] 2026-03-06 10:30:06,269 | INFO     | [monitor] cgroup control has ended
[2026-03-06 05:30:15] 2026-03-06 10:30:06,558 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139905078327104)>', '<ExcThread(monitor, started 139904700888832)>']
[2026-03-06 05:30:15] 2026-03-06 10:30:07,547 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 05:30:15] 2026-03-06 10:30:07,547 | INFO     | [monitor] control thread has ended
[2026-03-06 05:30:15] 2026-03-06 10:30:11,584 | INFO     | all workflow threads have been joined
[2026-03-06 05:30:15] 2026-03-06 10:30:11,584 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 05:30:15] 2026-03-06 10:30:11,585 | INFO     | traces error code: 0
[2026-03-06 05:30:15] 2026-03-06 10:30:11,585 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 05:30:15] 2026-03-06 10:30:12,950 [wrapper] ==== pilot stdout END ====
[2026-03-06 05:30:15] 2026-03-06 10:30:12,953 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 05:30:15] 2026-03-06 10:30:12,955 [wrapper] pilotpid: 2545347
[2026-03-06 05:30:15] 2026-03-06 10:30:12,958 [wrapper] Pilot exit status: 0
[2026-03-06 05:30:15] 2026-03-06 10:30:13,047 [wrapper] pandaids: 7038697107
[2026-03-06 05:30:15] 2026-03-06 10:30:13,932 [wrapper] cleanup supervisor_pilot 2983562 2545348
[2026-03-06 05:30:15] 2026-03-06 10:30:14,012 [wrapper] Test setup, not cleaning
[2026-03-06 05:30:15] 2026-03-06 10:30:14,051 [wrapper] apfmon messages muted
[2026-03-06 05:30:15] 2026-03-06 10:30:14,104 [wrapper] ==== wrapper stdout END ====
[2026-03-06 05:30:15] 2026-03-06 10:30:14,173 [wrapper] ==== wrapper stderr END ====
[2026-03-06 05:30:15]  *** Error codes and diagnostics ***
[2026-03-06 05:30:15]     "exeErrorCode": 0,
[2026-03-06 05:30:15]     "exeErrorDiag": "",
[2026-03-06 05:30:15]     "pilotErrorCode": 0,
[2026-03-06 05:30:15]     "pilotErrorDiag": "",
[2026-03-06 05:30:15]  *** Listing of results directory ***
[2026-03-06 05:30:15] total 611044
[2026-03-06 05:30:15] -rw-r--r--. 1 boincer umatlas    584627 Mar  5 13:20 pilot3.tar.gz
[2026-03-06 05:30:15] -rw-r--r--. 1 boincer umatlas      5111 Mar  5 13:22 queuedata.json
[2026-03-06 05:30:15] -rwx------. 1 boincer umatlas     36322 Mar  5 13:24 runpilot2-wrapper.sh
[2026-03-06 05:30:15] -rw-r--r--. 1 boincer umatlas       100 Mar  6 00:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 05:30:15] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  6 00:14 run_atlas
[2026-03-06 05:30:15] -rw-r--r--. 1 boincer umatlas       105 Mar  6 00:14 job.xml
[2026-03-06 05:30:15] -rw-r--r--. 2 boincer umatlas 434895091 Mar  6 00:14 EVNT.46701403._000207.pool.root.1
[2026-03-06 05:30:15] -rw-r--r--. 2 boincer umatlas     15845 Mar  6 00:14 start_atlas.sh
[2026-03-06 05:30:15] drwxrwx--x. 2 boincer umatlas      4096 Mar  6 00:14 shared
[2026-03-06 05:30:15] -rw-r--r--. 2 boincer umatlas    597958 Mar  6 00:14 input.tar.gz
[2026-03-06 05:30:15] -rw-r--r--. 1 boincer umatlas         0 Mar  6 00:14 boinc_lockfile
[2026-03-06 05:30:15] -rw-r--r--. 1 boincer umatlas      2563 Mar  6 00:15 pandaJob.out
[2026-03-06 05:30:15] -rw-------. 1 boincer umatlas        57 Mar  6 00:15 setup.sh.local
[2026-03-06 05:30:15] -rw-------. 1 boincer umatlas    998544 Mar  6 00:16 agis_schedconf.cvmfs.json
[2026-03-06 05:30:15] -rw-------. 1 boincer umatlas       435 Mar  6 00:17 workernode_map.json
[2026-03-06 05:30:15] drwx------. 5 boincer umatlas      4096 Mar  6 00:17 pilot3
[2026-03-06 05:30:15] -rw-r--r--. 1 boincer umatlas      6660 Mar  6 05:18 init_data.xml
[2026-03-06 05:30:15] -rw-------. 1 boincer umatlas 180988806 Mar  6 05:26 HITS.48955006._010310.pool.root.1
[2026-03-06 05:30:15] -rw-r--r--. 1 boincer umatlas       531 Mar  6 05:27 boinc_task_state.xml
[2026-03-06 05:30:15] -rw-------. 1 boincer umatlas      1041 Mar  6 05:28 memory_monitor_summary.json
[2026-03-06 05:30:15] -rw-------. 1 boincer umatlas        95 Mar  6 05:28 pilot_heartbeat.json
[2026-03-06 05:30:15] -rw-------. 1 boincer umatlas   1521291 Mar  6 05:28 agis_ddmendpoints.agis.ALL.json
[2026-03-06 05:30:15] -rw-------. 1 boincer umatlas    540655 Mar  6 05:29 log.48955006._010310.job.log.tgz.1
[2026-03-06 05:30:15] -rw-------. 1 boincer umatlas      6391 Mar  6 05:29 heartbeat.json
[2026-03-06 05:30:15] -rw-r--r--. 1 boincer umatlas        28 Mar  6 05:29 wrapper_checkpoint.txt
[2026-03-06 05:30:15] -rw-r--r--. 1 boincer umatlas      8192 Mar  6 05:29 boinc_mmap_file
[2026-03-06 05:30:15] -rw-------. 1 boincer umatlas      4819 Mar  6 05:30 pilotlog.txt
[2026-03-06 05:30:15] -rw-------. 1 boincer umatlas   2402755 Mar  6 05:30 log.48955006._010310.job.log.1
[2026-03-06 05:30:15] -rw-------. 1 boincer umatlas       357 Mar  6 05:30 output.list
[2026-03-06 05:30:15] -rw-r--r--. 1 boincer umatlas       620 Mar  6 05:30 runtime_log
[2026-03-06 05:30:15] -rw-------. 1 boincer umatlas   2959360 Mar  6 05:30 result.tar.gz
[2026-03-06 05:30:15] -rw-r--r--. 1 boincer umatlas      9344 Mar  6 05:30 runtime_log.err
[2026-03-06 05:30:15] -rw-------. 1 boincer umatlas       656 Mar  6 05:30 O7wLDm1XSI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmcfMLDmqoplfn.diag
[2026-03-06 05:30:15] -rw-r--r--. 1 boincer umatlas     21154 Mar  6 05:30 stderr.txt
[2026-03-06 05:30:15] HITS file was successfully produced:
[2026-03-06 05:30:15] -rw-------. 1 boincer umatlas 180988806 Mar  6 05:26 shared/HITS.pool.root.1
[2026-03-06 05:30:15]  *** Contents of shared directory: ***
[2026-03-06 05:30:15] total 604952
[2026-03-06 05:30:15] -rw-r--r--. 2 boincer umatlas 434895091 Mar  6 00:14 ATLAS.root_0
[2026-03-06 05:30:15] -rw-r--r--. 2 boincer umatlas     15845 Mar  6 00:14 start_atlas.sh
[2026-03-06 05:30:15] -rw-r--r--. 2 boincer umatlas    597958 Mar  6 00:14 input.tar.gz
[2026-03-06 05:30:15] -rw-------. 1 boincer umatlas 180988806 Mar  6 05:26 HITS.pool.root.1
[2026-03-06 05:30:15] -rw-------. 1 boincer umatlas   2959360 Mar  6 05:30 result.tar.gz
05:30:16 (2540912): run_atlas exited; CPU time 45082.119850
05:30:16 (2540912): called boinc_finish(0)

</stderr_txt>
]]>

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