Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:02:46 (4048510): wrapper (7.7.26015): starting
05:02:46 (4048510): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 05:02:46] Arguments: --nthreads 4
[2026-03-07 05:02:46] Threads: 4
[2026-03-07 05:02:46] Checking for CVMFS
[2026-03-07 05:02:46] No cvmfs_config command found, will try listing directly
[2026-03-07 05:02:46] CVMFS is ok
[2026-03-07 05:02:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 05:02:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 05:02:46] Further information can be found at the LHC@home message board.
[2026-03-07 05:02:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 05:02:46] Checking for apptainer binary...
[2026-03-07 05:02:46] which: no apptainer in ((null))
[2026-03-07 05:02:46] apptainer is not installed, using version from CVMFS
[2026-03-07 05:02:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 05:02:46] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot148/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-07 05:02:46] apptainer works
[2026-03-07 05:02:46] Set ATHENA_PROC_NUMBER=4
[2026-03-07 05:02:46] Set ATHENA_CORE_NUMBER=4
[2026-03-07 05:02:46] Starting ATLAS job with PandaID=7042913237
[2026-03-07 05:02:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot148/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 08:06:22]  *** The last 200 lines of the pilot log: ***
[2026-03-07 08:06:22] 2026-03-07 07:05:23,538 | INFO     | sum of square deviations: 1808350185.0
[2026-03-07 08:06:22] 2026-03-07 07:05:23,539 | INFO     | sum of deviations: 9659916323.999998
[2026-03-07 08:06:22] 2026-03-07 07:05:23,539 | INFO     | mean x: 1772861657.5
[2026-03-07 08:06:22] 2026-03-07 07:05:23,539 | INFO     | mean y: 2314013.3444444444
[2026-03-07 08:06:22] 2026-03-07 07:05:23,539 | INFO     | intersect: -9468028295.093975
[2026-03-07 08:06:22] 2026-03-07 07:05:23,539 | INFO     | chi2: 1.915920038206742
[2026-03-07 08:06:22] 2026-03-07 07:05:23,539 | INFO     | sum of square deviations: 1661798600.0
[2026-03-07 08:06:22] 2026-03-07 07:05:23,540 | INFO     | sum of deviations: 20639452540.99999
[2026-03-07 08:06:22] 2026-03-07 07:05:23,540 | INFO     | mean x: 1772861505.0
[2026-03-07 08:06:22] 2026-03-07 07:05:23,540 | INFO     | mean y: 2325170.165714286
[2026-03-07 08:06:22] 2026-03-07 07:05:23,540 | INFO     | intersect: -22016522898.555317
[2026-03-07 08:06:22] 2026-03-07 07:05:23,540 | INFO     | chi2: 1.093432606204607
[2026-03-07 08:06:22] 2026-03-07 07:05:23,540 | INFO     | current chi2=1.093432606204607 (change=42.929110589185385 %)
[2026-03-07 08:06:22] 2026-03-07 07:05:23,540 | INFO     | sum of square deviations: 1523386702.5
[2026-03-07 08:06:22] 2026-03-07 07:05:23,541 | INFO     | sum of deviations: 19956296949.0
[2026-03-07 08:06:22] 2026-03-07 07:05:23,541 | INFO     | mean x: 1772861352.5
[2026-03-07 08:06:22] 2026-03-07 07:05:23,541 | INFO     | mean y: 2324417.282352941
[2026-03-07 08:06:22] 2026-03-07 07:05:23,541 | INFO     | intersect: -23222079171.00863
[2026-03-07 08:06:22] 2026-03-07 07:05:23,541 | INFO     | chi2: 1.0940034986139822
[2026-03-07 08:06:22] 2026-03-07 07:05:23,541 | INFO     | current chi2=1.0940034986139822 (change=-0.05221102847452658 %)
[2026-03-07 08:06:22] 2026-03-07 07:05:23,541 | INFO     | right removable region: 169
[2026-03-07 08:06:22] 2026-03-07 07:05:23,541 | INFO     | sum of square deviations: 1661798600.0
[2026-03-07 08:06:22] 2026-03-07 07:05:23,541 | INFO     | sum of deviations: -7543294708.999999
[2026-03-07 08:06:22] 2026-03-07 07:05:23,542 | INFO     | mean x: 1772861810.0
[2026-03-07 08:06:22] 2026-03-07 07:05:23,542 | INFO     | mean y: 2331591.6285714284
[2026-03-07 08:06:22] 2026-03-07 07:05:23,542 | INFO     | intersect: 8049768333.458275
[2026-03-07 08:06:22] 2026-03-07 07:05:23,542 | INFO     | chi2: 0.8421950263745245
[2026-03-07 08:06:22] 2026-03-07 07:05:23,542 | INFO     | current chi2=0.8421950263745245 (change=56.04226640049133 %)
[2026-03-07 08:06:22] 2026-03-07 07:05:23,542 | INFO     | sum of square deviations: 1523386702.5
[2026-03-07 08:06:22] 2026-03-07 07:05:23,542 | INFO     | sum of deviations: -7952696300.5
[2026-03-07 08:06:22] 2026-03-07 07:05:23,542 | INFO     | mean x: 1772861962.5
[2026-03-07 08:06:22] 2026-03-07 07:05:23,542 | INFO     | mean y: 2332041.288235294
[2026-03-07 08:06:22] 2026-03-07 07:05:23,542 | INFO     | intersect: 9257390357.95417
[2026-03-07 08:06:22] 2026-03-07 07:05:23,543 | INFO     | chi2: 0.8423055542935876
[2026-03-07 08:06:22] 2026-03-07 07:05:23,543 | INFO     | current chi2=0.8423055542935876 (change=-0.01312379147367738 %)
[2026-03-07 08:06:22] 2026-03-07 07:05:23,543 | INFO     | left removable region: 20
[2026-03-07 08:06:22] 2026-03-07 07:05:23,543 | INFO     | sum of square deviations: 1025693650.0
[2026-03-07 08:06:22] 2026-03-07 07:05:23,543 | INFO     | sum of deviations: 2350899251.9999995
[2026-03-07 08:06:22] 2026-03-07 07:05:23,543 | INFO     | mean x: 1772861932.0
[2026-03-07 08:06:22] 2026-03-07 07:05:23,543 | INFO     | mean y: 2344665.644295302
[2026-03-07 08:06:22] 2026-03-07 07:05:23,543 | INFO     | intersect: -4061071140.6620755
[2026-03-07 08:06:22] 2026-03-07 07:05:23,543 | INFO     | chi2: 0.0003119943366313019
[2026-03-07 08:06:22] 2026-03-07 07:05:23,544 | INFO     | current memory leak: 2.29 B/s (using 149 data points, chi2=0.00)
[2026-03-07 08:06:22] 2026-03-07 07:05:23,544 | INFO     | could have reported an average CPU frequency of 3597 MHz (10 samples)
[2026-03-07 08:06:22] 2026-03-07 07:05:23,544 | INFO     | ..............................
[2026-03-07 08:06:22] 2026-03-07 07:05:23,544 | INFO     | . Timing measurements:
[2026-03-07 08:06:22] 2026-03-07 07:05:23,544 | INFO     | . get job = 0 s
[2026-03-07 08:06:22] 2026-03-07 07:05:23,544 | INFO     | . initial setup = 4 s
[2026-03-07 08:06:22] 2026-03-07 07:05:23,544 | INFO     | . payload setup = 4 s
[2026-03-07 08:06:22] 2026-03-07 07:05:23,544 | INFO     | . stage-in = 0 s
[2026-03-07 08:06:22] 2026-03-07 07:05:23,544 | INFO     | . payload execution = 10924 s
[2026-03-07 08:06:22] 2026-03-07 07:05:23,544 | INFO     | . stage-out = 0 s
[2026-03-07 08:06:22] 2026-03-07 07:05:23,544 | INFO     | . log creation = 0 s
[2026-03-07 08:06:22] 2026-03-07 07:05:23,544 | INFO     | ..............................
[2026-03-07 08:06:22] 2026-03-07 07:05:23,599 | INFO     | 
[2026-03-07 08:06:22] 2026-03-07 07:05:23,599 | INFO     | job summary report
[2026-03-07 08:06:22] 2026-03-07 07:05:23,599 | INFO     | --------------------------------------------------
[2026-03-07 08:06:22] 2026-03-07 07:05:23,600 | INFO     | PanDA job id: 7042913237
[2026-03-07 08:06:22] 2026-03-07 07:05:23,600 | INFO     | task id: 48966932
[2026-03-07 08:06:22] 2026-03-07 07:05:23,600 | INFO     | errors: (none)
[2026-03-07 08:06:22] 2026-03-07 07:05:23,600 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 08:06:22] 2026-03-07 07:05:23,600 | INFO     | pilot state: finished 
[2026-03-07 08:06:22] 2026-03-07 07:05:23,600 | INFO     | transexitcode: 0
[2026-03-07 08:06:22] 2026-03-07 07:05:23,600 | INFO     | exeerrorcode: 0
[2026-03-07 08:06:22] 2026-03-07 07:05:23,600 | INFO     | exeerrordiag: 
[2026-03-07 08:06:22] 2026-03-07 07:05:23,600 | INFO     | exitcode: 0
[2026-03-07 08:06:22] 2026-03-07 07:05:23,600 | INFO     | exitmsg: OK
[2026-03-07 08:06:22] 2026-03-07 07:05:23,600 | INFO     | cpuconsumptiontime: 42069 s
[2026-03-07 08:06:22] 2026-03-07 07:05:23,600 | INFO     | nevents: 400
[2026-03-07 08:06:22] 2026-03-07 07:05:23,600 | INFO     | neventsw: 0
[2026-03-07 08:06:22] 2026-03-07 07:05:23,600 | INFO     | pid: 4058993
[2026-03-07 08:06:22] 2026-03-07 07:05:23,600 | INFO     | pgrp: 4058993
[2026-03-07 08:06:22] 2026-03-07 07:05:23,600 | INFO     | corecount: 4
[2026-03-07 08:06:22] 2026-03-07 07:05:23,600 | INFO     | event service: False
[2026-03-07 08:06:22] 2026-03-07 07:05:23,600 | INFO     | sizes: {0: 2294706, 1: 2295836, 11: 2295836, 10933: 2325089, 10934: 2334305}
[2026-03-07 08:06:22] 2026-03-07 07:05:23,600 | INFO     | --------------------------------------------------
[2026-03-07 08:06:22] 2026-03-07 07:05:23,600 | INFO     | 
[2026-03-07 08:06:22] 2026-03-07 07:05:23,600 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot148/slots/0
[2026-03-07 08:06:22] 2026-03-07 07:05:23,622 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 08:06:22] 2026-03-07 07:05:23,622 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 08:06:22] 2026-03-07 07:05:23,622 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 08:06:22] 2026-03-07 07:05:23,622 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 08:06:22] 2026-03-07 07:05:23,622 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 08:06:22] 2026-03-07 07:05:23,622 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 08:06:22] 2026-03-07 07:05:23,622 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 08:06:22] 2026-03-07 07:05:23,622 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 08:06:22] 2026-03-07 07:05:23,622 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 08:06:22] 2026-03-07 07:05:23,622 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 08:06:22] 2026-03-07 07:05:23,622 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 08:06:22] 2026-03-07 07:05:23,622 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 08:06:22] 2026-03-07 07:05:23,622 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 08:06:22] 2026-03-07 07:05:23,622 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 08:06:22] 2026-03-07 07:05:23,622 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 08:06:22] 2026-03-07 07:05:23,622 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 08:06:22] 2026-03-07 07:05:23,622 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 08:06:22] 2026-03-07 07:05:23,622 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 08:06:22] 2026-03-07 07:05:23,623 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 08:06:22] 2026-03-07 07:05:23,623 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 08:06:22] 2026-03-07 07:05:23,623 | INFO     | job 7042913237 has completed (purged errors)
[2026-03-07 08:06:22] 2026-03-07 07:05:23,623 | INFO     | overall cleanup function is called
[2026-03-07 08:06:22] 2026-03-07 07:05:24,629 | INFO     | --- collectZombieJob: --- 10, [4058993]
[2026-03-07 08:06:22] 2026-03-07 07:05:24,630 | INFO     | zombie collector waiting for pid 4058993
[2026-03-07 08:06:22] 2026-03-07 07:05:24,630 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 08:06:22] 2026-03-07 07:05:24,630 | INFO     | collected zombie processes
[2026-03-07 08:06:22] 2026-03-07 07:05:24,630 | INFO     | will attempt to kill all subprocesses of pid=4058993
[2026-03-07 08:06:22] 2026-03-07 07:05:25,057 | INFO     | process IDs to be killed: [4058993] (in reverse order)
[2026-03-07 08:06:22] 2026-03-07 07:05:25,290 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 08:06:22] 2026-03-07 07:05:25,291 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 08:06:22] 2026-03-07 07:05:25,317 | INFO     | did not find any defunct processes belonging to 4058993
[2026-03-07 08:06:22] 2026-03-07 07:05:25,344 | INFO     | did not find any defunct processes belonging to 4058993
[2026-03-07 08:06:22] 2026-03-07 07:05:25,344 | INFO     | ready for new job
[2026-03-07 08:06:22] 2026-03-07 07:05:25,344 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 08:06:22] 2026-03-07 07:05:25,345 | INFO     | **************************************
[2026-03-07 08:06:22] 2026-03-07 07:05:25,346 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 08:06:22] 2026-03-07 07:05:25,346 | INFO     | **************************************
[2026-03-07 08:06:22] 2026-03-07 07:05:25,346 | INFO     | 
[2026-03-07 08:06:22] 2026-03-07 07:05:25,351 | INFO     | architecture information:
[2026-03-07 08:06:22] 2026-03-07 07:05:25,351 | INFO     | executing command: cat /etc/os-release
[2026-03-07 08:06:22] 2026-03-07 07:05:25,363 | INFO     | cat /etc/os-release:
[2026-03-07 08:06:22] NAME="CentOS Linux"
[2026-03-07 08:06:22] VERSION="7 (Core)"
[2026-03-07 08:06:22] ID="centos"
[2026-03-07 08:06:22] ID_LIKE="rhel fedora"
[2026-03-07 08:06:22] VERSION_ID="7"
[2026-03-07 08:06:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 08:06:22] ANSI_COLOR="0;31"
[2026-03-07 08:06:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 08:06:22] HOME_URL="https://www.centos.org/"
[2026-03-07 08:06:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 08:06:22] 
[2026-03-07 08:06:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 08:06:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 08:06:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 08:06:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 08:06:22] 
[2026-03-07 08:06:22] 2026-03-07 07:05:25,363 | INFO     | **************************************
[2026-03-07 08:06:22] 2026-03-07 07:05:25,866 | INFO     | executing command: df -mP /var/lib/boinc/var/slot148/slots/0
[2026-03-07 08:06:22] 2026-03-07 07:05:25,878 | INFO     | sufficient remaining disk space (22028484608 B)
[2026-03-07 08:06:22] 2026-03-07 07:05:25,878 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 08:06:22] 2026-03-07 07:05:25,878 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 08:06:22] 2026-03-07 07:05:25,878 | INFO     | update_server=False
[2026-03-07 08:06:22] 2026-03-07 07:05:25,878 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 08:06:22] 2026-03-07 07:05:25,920 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 08:06:22] 2026-03-07 07:05:26,111 | INFO     | all data control threads have been joined
[2026-03-07 08:06:22] 2026-03-07 07:05:26,622 | WARNING  | process 4058993 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 08:06:22] 2026-03-07 07:05:26,840 | INFO     | all payload control threads have been joined
[2026-03-07 08:06:22] 2026-03-07 07:05:26,851 | INFO     | using path: /var/lib/boinc/var/slot148/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 08:06:22] 2026-03-07 07:05:26,852 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot148/slots/0/PanDA_Pilot-7042913237/payload.stdout) since it has not been created yet
[2026-03-07 08:06:22] 2026-03-07 07:05:26,852 | INFO     | executing command: df -mP /var/lib/boinc/var/slot148/slots/0
[2026-03-07 08:06:22] 2026-03-07 07:05:26,862 | INFO     | sufficient remaining disk space (22022193152 B)
[2026-03-07 08:06:22] 2026-03-07 07:05:26,862 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-07 08:06:22] 2026-03-07 07:05:26,863 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot148/slots/0/PanDA_Pilot-7042913237/HITS.48966932._000676.pool.root.1 since it does not exist
[2026-03-07 08:06:22] 2026-03-07 07:05:26,883 | INFO     | [job] retrieve thread has finished
[2026-03-07 08:06:22] 2026-03-07 07:05:27,024 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 08:06:22] 2026-03-07 07:05:27,117 | INFO     | [data] control thread has finished
[2026-03-07 08:06:22] 2026-03-07 07:05:27,182 | INFO     | number of running child processes to parent process 4058993: 1
[2026-03-07 08:06:22] 2026-03-07 07:05:27,182 | INFO     | maximum number of monitored processes: 6
[2026-03-07 08:06:22] 2026-03-07 07:05:27,182 | INFO     | aborting job monitoring since job object (job id=7042913237) has expired
[2026-03-07 08:06:22] 2026-03-07 07:05:27,182 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 08:06:22] 2026-03-07 07:05:27,182 | INFO     | will abort loop
[2026-03-07 08:06:22] 2026-03-07 07:05:27,345 | INFO     | [data] copytool_in thread has finished
[2026-03-07 08:06:22] 2026-03-07 07:05:27,474 | INFO     | all job control threads have been joined
[2026-03-07 08:06:22] 2026-03-07 07:05:27,525 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 08:06:22] 2026-03-07 07:05:27,827 | INFO     | [payload] validate_post thread has finished
[2026-03-07 08:06:22] 2026-03-07 07:05:27,846 | INFO     | [payload] control thread has finished
[2026-03-07 08:06:22] 2026-03-07 07:05:27,925 | INFO     | [data] copytool_out thread has finished
[2026-03-07 08:06:22] 2026-03-07 07:05:28,187 | INFO     | [job] job monitor thread has finished
[2026-03-07 08:06:22] 2026-03-07 07:05:28,214 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 08:06:22] 2026-03-07 07:05:28,351 | INFO     | [payload] failed_post thread has finished
[2026-03-07 08:06:22] 2026-03-07 07:05:28,383 | INFO     | [job] validate thread has finished
[2026-03-07 08:06:22] 2026-03-07 07:05:28,479 | INFO     | [job] control thread has finished
[2026-03-07 08:06:22] 2026-03-07 07:05:28,609 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 08:06:22] 2026-03-07 07:05:28,970 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 08:06:22] 2026-03-07 07:05:29,615 | INFO     | [job] queue monitor thread has finished
[2026-03-07 08:06:22] 2026-03-07 07:05:32,975 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 08:06:22] 2026-03-07 07:05:35,955 | INFO     | job.realtimelogging is not enabled
[2026-03-07 08:06:22] 2026-03-07 07:05:36,960 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 08:06:22] 2026-03-07 07:05:56,041 | INFO     | PID=4053122 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 08:06:22] 2026-03-07 07:05:56,042 | INFO     | .. there are 57 such processes running
[2026-03-07 08:06:22] 2026-03-07 07:05:56,042 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 08:06:22] 2026-03-07 07:05:56,042 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 08:06:22] 2026-03-07 07:05:56,042 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 08:06:22] 2026-03-07 07:06:16,621 | INFO     | [monitor] cgroup control has ended
[2026-03-07 08:06:22] 2026-03-07 07:06:16,979 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22667906615104)>', '<ExcThread(monitor, started 22667664299776)>']
[2026-03-07 08:06:22] 2026-03-07 07:06:17,147 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 08:06:22] 2026-03-07 07:06:17,148 | INFO     | [monitor] control thread has ended
[2026-03-07 08:06:22] 2026-03-07 07:06:22,003 | INFO     | all workflow threads have been joined
[2026-03-07 08:06:22] 2026-03-07 07:06:22,004 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 08:06:22] 2026-03-07 07:06:22,004 | INFO     | traces error code: 0
[2026-03-07 08:06:22] 2026-03-07 07:06:22,004 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 08:06:22] 2026-03-07 07:06:22,143 [wrapper] ==== pilot stdout END ====
[2026-03-07 08:06:22] 2026-03-07 07:06:22,146 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 08:06:22] 2026-03-07 07:06:22,152 [wrapper] pilotpid: 4053122
[2026-03-07 08:06:22] 2026-03-07 07:06:22,155 [wrapper] Pilot exit status: 0
[2026-03-07 08:06:22] 2026-03-07 07:06:22,173 [wrapper] pandaids: 7042913237
[2026-03-07 08:06:22] 2026-03-07 07:06:22,291 [wrapper] cleanup supervisor_pilot 1519629 4053123
[2026-03-07 08:06:22] 2026-03-07 07:06:22,294 [wrapper] Test setup, not cleaning
[2026-03-07 08:06:22] 2026-03-07 07:06:22,300 [wrapper] apfmon messages muted
[2026-03-07 08:06:22] 2026-03-07 07:06:22,302 [wrapper] ==== wrapper stdout END ====
[2026-03-07 08:06:22] 2026-03-07 07:06:22,304 [wrapper] ==== wrapper stderr END ====
[2026-03-07 08:06:22]  *** Error codes and diagnostics ***
[2026-03-07 08:06:22]     "exeErrorCode": 0,
[2026-03-07 08:06:22]     "exeErrorDiag": "",
[2026-03-07 08:06:22]     "pilotErrorCode": 0,
[2026-03-07 08:06:22]     "pilotErrorDiag": "",
[2026-03-07 08:06:22]  *** Listing of results directory ***
[2026-03-07 08:06:22] total 482980
[2026-03-07 08:06:22] -rw-r--r--. 1 boinc boinc    584627 Mar  6 05:56 pilot3.tar.gz
[2026-03-07 08:06:22] -rwx------. 1 boinc boinc     36322 Mar  6 05:57 runpilot2-wrapper.sh
[2026-03-07 08:06:22] -rw-r--r--. 1 boinc boinc      5111 Mar  6 05:58 queuedata.json
[2026-03-07 08:06:22] -rw-r--r--. 1 boinc boinc       100 Mar  7 05:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 08:06:22] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 05:02 run_atlas
[2026-03-07 08:06:22] -rw-r--r--. 1 boinc boinc       105 Mar  7 05:02 job.xml
[2026-03-07 08:06:22] -rw-r--r--. 1 boinc boinc      6707 Mar  7 05:02 init_data.xml
[2026-03-07 08:06:22] -rw-r--r--. 2 boinc boinc 227142496 Mar  7 05:02 EVNT.48966930._000042.pool.root.1
[2026-03-07 08:06:22] -rw-r--r--. 2 boinc boinc     15845 Mar  7 05:02 start_atlas.sh
[2026-03-07 08:06:22] drwxrwx--x. 2 boinc boinc      4096 Mar  7 05:02 shared
[2026-03-07 08:06:22] -rw-r--r--. 2 boinc boinc    597941 Mar  7 05:02 input.tar.gz
[2026-03-07 08:06:22] -rw-r--r--. 1 boinc boinc         0 Mar  7 05:02 boinc_lockfile
[2026-03-07 08:06:22] -rw-r--r--. 1 boinc boinc      2560 Mar  7 05:02 pandaJob.out
[2026-03-07 08:06:22] -rw-------. 1 boinc boinc    999155 Mar  7 05:02 agis_schedconf.cvmfs.json
[2026-03-07 08:06:22] -rw-------. 1 boinc boinc       444 Mar  7 05:02 workernode_map.json
[2026-03-07 08:06:22] drwx------. 5 boinc boinc      4096 Mar  7 05:02 pilot3
[2026-03-07 08:06:22] -rw-------. 1 boinc boinc 259699302 Mar  7 08:04 HITS.48966932._000676.pool.root.1
[2026-03-07 08:06:22] -rw-------. 1 boinc boinc        95 Mar  7 08:05 pilot_heartbeat.json
[2026-03-07 08:06:22] -rw-r--r--. 1 boinc boinc       530 Mar  7 08:05 boinc_task_state.xml
[2026-03-07 08:06:22] -rw-------. 1 boinc boinc      1032 Mar  7 08:05 memory_monitor_summary.json
[2026-03-07 08:06:22] -rw-------. 1 boinc boinc   1521291 Mar  7 08:05 agis_ddmendpoints.agis.ALL.json
[2026-03-07 08:06:22] -rw-------. 1 boinc boinc    346720 Mar  7 08:05 log.48966932._000676.job.log.tgz.1
[2026-03-07 08:06:22] -rw-------. 1 boinc boinc      6346 Mar  7 08:05 heartbeat.json
[2026-03-07 08:06:22] -rw-r--r--. 1 boinc boinc      8192 Mar  7 08:06 boinc_mmap_file
[2026-03-07 08:06:22] -rw-r--r--. 1 boinc boinc        28 Mar  7 08:06 wrapper_checkpoint.txt
[2026-03-07 08:06:22] -rw-------. 1 boinc boinc      6112 Mar  7 08:06 pilotlog.txt
[2026-03-07 08:06:22] -rw-------. 1 boinc boinc   1547455 Mar  7 08:06 log.48966932._000676.job.log.1
[2026-03-07 08:06:22] -rw-------. 1 boinc boinc       357 Mar  7 08:06 output.list
[2026-03-07 08:06:22] -rw-r--r--. 1 boinc boinc       620 Mar  7 08:06 runtime_log
[2026-03-07 08:06:22] -rw-------. 1 boinc boinc   1914880 Mar  7 08:06 result.tar.gz
[2026-03-07 08:06:22] -rw-r--r--. 1 boinc boinc      9222 Mar  7 08:06 runtime_log.err
[2026-03-07 08:06:22] -rw-------. 1 boinc boinc       665 Mar  7 08:06 RtJODmvQcI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm3LQLDmvarQ2m.diag
[2026-03-07 08:06:22] -rw-r--r--. 1 boinc boinc     21132 Mar  7 08:06 stderr.txt
[2026-03-07 08:06:22] HITS file was successfully produced:
[2026-03-07 08:06:22] -rw-------. 1 boinc boinc 259699302 Mar  7 08:04 shared/HITS.pool.root.1
[2026-03-07 08:06:22]  *** Contents of shared directory: ***
[2026-03-07 08:06:22] total 477916
[2026-03-07 08:06:22] -rw-r--r--. 2 boinc boinc 227142496 Mar  7 05:02 ATLAS.root_0
[2026-03-07 08:06:22] -rw-r--r--. 2 boinc boinc     15845 Mar  7 05:02 start_atlas.sh
[2026-03-07 08:06:22] -rw-r--r--. 2 boinc boinc    597941 Mar  7 05:02 input.tar.gz
[2026-03-07 08:06:22] -rw-------. 1 boinc boinc 259699302 Mar  7 08:04 HITS.pool.root.1
[2026-03-07 08:06:22] -rw-------. 1 boinc boinc   1914880 Mar  7 08:06 result.tar.gz
08:06:23 (4048510): run_atlas exited; CPU time 42548.953800
08:06:23 (4048510): called boinc_finish(0)

</stderr_txt>
]]>

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