Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:06:42 (637600): wrapper (7.7.26015): starting
02:06:42 (637600): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 02:06:42] Arguments: --nthreads 4
[2026-03-07 02:06:42] Threads: 4
[2026-03-07 02:06:42] Checking for CVMFS
[2026-03-07 02:06:42] No cvmfs_config command found, will try listing directly
[2026-03-07 02:06:42] CVMFS is ok
[2026-03-07 02:06:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 02:06:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 02:06:42] Further information can be found at the LHC@home message board.
[2026-03-07 02:06:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 02:06:42] Checking for apptainer binary...
[2026-03-07 02:06:42] which: no apptainer in ((null))
[2026-03-07 02:06:42] apptainer is not installed, using version from CVMFS
[2026-03-07 02:06:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 02:06:43] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot20/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-03-07 02:06:43] apptainer works
[2026-03-07 02:06:43] Set ATHENA_PROC_NUMBER=4
[2026-03-07 02:06:43] Set ATHENA_CORE_NUMBER=4
[2026-03-07 02:06:43] Starting ATLAS job with PandaID=7042885996
[2026-03-07 02:06:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot20/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 06:00:28]  *** The last 200 lines of the pilot log: ***
[2026-03-07 06:00:28] 2026-03-07 04:59:47,667 | INFO     | total number of processed events: 400 (read)
[2026-03-07 06:00:28] 2026-03-07 04:59:47,679 | INFO     | using path: /var/lib/boinc/var/slot20/slots/2/PanDA_Pilot-7042885996/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 06:00:28] 2026-03-07 04:59:47,680 | INFO     | extracted standard info from prmon json
[2026-03-07 06:00:28] 2026-03-07 04:59:47,680 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 06:00:28] 2026-03-07 04:59:47,680 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 06:00:28] 2026-03-07 04:59:47,680 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 06:00:28] 2026-03-07 04:59:47,680 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 06:00:28] 2026-03-07 04:59:47,692 | INFO     | fitting pss+swap vs Time
[2026-03-07 06:00:28] 2026-03-07 04:59:47,692 | INFO     | sum of square deviations: 3723716330.0
[2026-03-07 06:00:28] 2026-03-07 04:59:47,694 | INFO     | sum of deviations: 11110773325.0
[2026-03-07 06:00:28] 2026-03-07 04:59:47,694 | INFO     | mean x: 1772852596.0
[2026-03-07 06:00:28] 2026-03-07 04:59:47,694 | INFO     | mean y: 2304402.864628821
[2026-03-07 06:00:28] 2026-03-07 04:59:47,694 | INFO     | intersect: -5287508672.878926
[2026-03-07 06:00:28] 2026-03-07 04:59:47,694 | INFO     | chi2: 2.217408994514728
[2026-03-07 06:00:28] 2026-03-07 04:59:47,695 | INFO     | sum of square deviations: 3485088600.0
[2026-03-07 06:00:28] 2026-03-07 04:59:47,696 | INFO     | sum of deviations: 25494194149.0
[2026-03-07 06:00:28] 2026-03-07 04:59:47,696 | INFO     | mean x: 1772852443.5
[2026-03-07 06:00:28] 2026-03-07 04:59:47,696 | INFO     | mean y: 2313426.276785714
[2026-03-07 06:00:28] 2026-03-07 04:59:47,696 | INFO     | intersect: -12966494423.29067
[2026-03-07 06:00:28] 2026-03-07 04:59:47,697 | INFO     | chi2: 1.3531770753138825
[2026-03-07 06:00:28] 2026-03-07 04:59:47,697 | INFO     | current chi2=1.3531770753138825 (change=38.97485404536206 %)
[2026-03-07 06:00:28] 2026-03-07 04:59:47,697 | INFO     | sum of square deviations: 3256879670.0
[2026-03-07 06:00:28] 2026-03-07 04:59:47,698 | INFO     | sum of deviations: 24707824971.0
[2026-03-07 06:00:28] 2026-03-07 04:59:47,699 | INFO     | mean x: 1772852291.0
[2026-03-07 06:00:28] 2026-03-07 04:59:47,699 | INFO     | mean y: 2312900.684931507
[2026-03-07 06:00:28] 2026-03-07 04:59:47,699 | INFO     | intersect: -13447162837.994835
[2026-03-07 06:00:28] 2026-03-07 04:59:47,699 | INFO     | chi2: 1.353860406248935
[2026-03-07 06:00:28] 2026-03-07 04:59:47,699 | INFO     | current chi2=1.353860406248935 (change=-0.05049826423448362 %)
[2026-03-07 06:00:28] 2026-03-07 04:59:47,699 | INFO     | right removable region: 218
[2026-03-07 06:00:28] 2026-03-07 04:59:47,700 | INFO     | sum of square deviations: 3485088600.0
[2026-03-07 06:00:28] 2026-03-07 04:59:47,701 | INFO     | sum of deviations: -18895514665.5
[2026-03-07 06:00:28] 2026-03-07 04:59:47,701 | INFO     | mean x: 1772852748.5
[2026-03-07 06:00:28] 2026-03-07 04:59:47,701 | INFO     | mean y: 2323374.1651785714
[2026-03-07 06:00:28] 2026-03-07 04:59:47,701 | INFO     | intersect: 9614407586.042528
[2026-03-07 06:00:28] 2026-03-07 04:59:47,702 | INFO     | chi2: 0.8921438029577937
[2026-03-07 06:00:28] 2026-03-07 04:59:47,702 | INFO     | current chi2=0.8921438029577937 (change=59.76638476867746 %)
[2026-03-07 06:00:28] 2026-03-07 04:59:47,702 | INFO     | sum of square deviations: 3256879670.0
[2026-03-07 06:00:28] 2026-03-07 04:59:47,703 | INFO     | sum of deviations: -17726289815.0
[2026-03-07 06:00:28] 2026-03-07 04:59:47,703 | INFO     | mean x: 1772852901.0
[2026-03-07 06:00:28] 2026-03-07 04:59:47,703 | INFO     | mean y: 2322589.721461187
[2026-03-07 06:00:28] 2026-03-07 04:59:47,704 | INFO     | intersect: 9651467632.43331
[2026-03-07 06:00:28] 2026-03-07 04:59:47,704 | INFO     | chi2: 0.8920703760103703
[2026-03-07 06:00:28] 2026-03-07 04:59:47,704 | INFO     | current chi2=0.8920703760103703 (change=0.008230393707826808 %)
[2026-03-07 06:00:28] 2026-03-07 04:59:47,704 | INFO     | left removable region: 20
[2026-03-07 06:00:28] 2026-03-07 04:59:47,704 | INFO     | sum of square deviations: 2406926989.5
[2026-03-07 06:00:28] 2026-03-07 04:59:47,706 | INFO     | sum of deviations: -1837799033.0
[2026-03-07 06:00:28] 2026-03-07 04:59:47,706 | INFO     | mean x: 1772852870.5
[2026-03-07 06:00:28] 2026-03-07 04:59:47,706 | INFO     | mean y: 2331021.4545454546
[2026-03-07 06:00:28] 2026-03-07 04:59:47,706 | INFO     | intersect: 1355985413.6606846
[2026-03-07 06:00:28] 2026-03-07 04:59:47,706 | INFO     | chi2: 0.006537812659036677
[2026-03-07 06:00:28] 2026-03-07 04:59:47,706 | INFO     | current memory leak: -0.76 B/s (using 198 data points, chi2=0.01)
[2026-03-07 06:00:28] 2026-03-07 04:59:47,707 | INFO     | could have reported an average CPU frequency of 2533 MHz (11 samples)
[2026-03-07 06:00:28] 2026-03-07 04:59:47,707 | INFO     | ..............................
[2026-03-07 06:00:28] 2026-03-07 04:59:47,707 | INFO     | . Timing measurements:
[2026-03-07 06:00:28] 2026-03-07 04:59:47,707 | INFO     | . get job = 0 s
[2026-03-07 06:00:28] 2026-03-07 04:59:47,707 | INFO     | . initial setup = 5 s
[2026-03-07 06:00:28] 2026-03-07 04:59:47,707 | INFO     | . payload setup = 6 s
[2026-03-07 06:00:28] 2026-03-07 04:59:47,707 | INFO     | . stage-in = 0 s
[2026-03-07 06:00:28] 2026-03-07 04:59:47,708 | INFO     | . payload execution = 13945 s
[2026-03-07 06:00:28] 2026-03-07 04:59:47,708 | INFO     | . stage-out = 1 s
[2026-03-07 06:00:28] 2026-03-07 04:59:47,708 | INFO     | . log creation = 0 s
[2026-03-07 06:00:28] 2026-03-07 04:59:47,708 | INFO     | ..............................
[2026-03-07 06:00:28] 2026-03-07 04:59:47,824 | INFO     | 
[2026-03-07 06:00:28] 2026-03-07 04:59:47,824 | INFO     | job summary report
[2026-03-07 06:00:28] 2026-03-07 04:59:47,824 | INFO     | --------------------------------------------------
[2026-03-07 06:00:28] 2026-03-07 04:59:47,824 | INFO     | PanDA job id: 7042885996
[2026-03-07 06:00:28] 2026-03-07 04:59:47,825 | INFO     | task id: 48966988
[2026-03-07 06:00:28] 2026-03-07 04:59:47,825 | INFO     | errors: (none)
[2026-03-07 06:00:28] 2026-03-07 04:59:47,825 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 06:00:28] 2026-03-07 04:59:47,825 | INFO     | pilot state: finished 
[2026-03-07 06:00:28] 2026-03-07 04:59:47,825 | INFO     | transexitcode: 0
[2026-03-07 06:00:28] 2026-03-07 04:59:47,825 | INFO     | exeerrorcode: 0
[2026-03-07 06:00:28] 2026-03-07 04:59:47,825 | INFO     | exeerrordiag: 
[2026-03-07 06:00:28] 2026-03-07 04:59:47,825 | INFO     | exitcode: 0
[2026-03-07 06:00:28] 2026-03-07 04:59:47,825 | INFO     | exitmsg: OK
[2026-03-07 06:00:28] 2026-03-07 04:59:47,825 | INFO     | cpuconsumptiontime: 52965 s
[2026-03-07 06:00:28] 2026-03-07 04:59:47,825 | INFO     | nevents: 400
[2026-03-07 06:00:28] 2026-03-07 04:59:47,825 | INFO     | neventsw: 0
[2026-03-07 06:00:28] 2026-03-07 04:59:47,825 | INFO     | pid: 646216
[2026-03-07 06:00:28] 2026-03-07 04:59:47,826 | INFO     | pgrp: 646216
[2026-03-07 06:00:28] 2026-03-07 04:59:47,826 | INFO     | corecount: 4
[2026-03-07 06:00:28] 2026-03-07 04:59:47,826 | INFO     | event service: False
[2026-03-07 06:00:28] 2026-03-07 04:59:47,826 | INFO     | sizes: {0: 2295588, 1: 2295878, 11: 2295878, 13955: 2326744, 13957: 2335764, 13958: 2336142}
[2026-03-07 06:00:28] 2026-03-07 04:59:47,826 | INFO     | --------------------------------------------------
[2026-03-07 06:00:28] 2026-03-07 04:59:47,826 | INFO     | 
[2026-03-07 06:00:28] 2026-03-07 04:59:47,826 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot20/slots/2
[2026-03-07 06:00:28] 2026-03-07 04:59:47,872 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 06:00:28] 2026-03-07 04:59:47,872 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 06:00:28] 2026-03-07 04:59:47,872 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 06:00:28] 2026-03-07 04:59:47,872 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 06:00:28] 2026-03-07 04:59:47,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 06:00:28] 2026-03-07 04:59:47,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 06:00:28] 2026-03-07 04:59:47,873 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 06:00:28] 2026-03-07 04:59:47,873 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 06:00:28] 2026-03-07 04:59:47,873 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 06:00:28] 2026-03-07 04:59:47,873 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 06:00:28] 2026-03-07 04:59:47,873 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 06:00:28] 2026-03-07 04:59:47,873 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 06:00:28] 2026-03-07 04:59:47,873 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 06:00:28] 2026-03-07 04:59:47,873 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 06:00:28] 2026-03-07 04:59:47,873 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 06:00:28] 2026-03-07 04:59:47,873 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 06:00:28] 2026-03-07 04:59:47,873 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 06:00:28] 2026-03-07 04:59:47,874 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 06:00:28] 2026-03-07 04:59:47,874 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 06:00:28] 2026-03-07 04:59:47,874 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 06:00:28] 2026-03-07 04:59:47,874 | INFO     | job 7042885996 has completed (purged errors)
[2026-03-07 06:00:28] 2026-03-07 04:59:47,874 | INFO     | overall cleanup function is called
[2026-03-07 06:00:28] 2026-03-07 04:59:48,439 | INFO     | PID=641377 has CPU usage=15.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 06:00:28] 2026-03-07 04:59:48,440 | INFO     | .. there are 13 such processes running
[2026-03-07 06:00:28] 2026-03-07 04:59:48,881 | INFO     | --- collectZombieJob: --- 10, [646216]
[2026-03-07 06:00:28] 2026-03-07 04:59:48,882 | INFO     | zombie collector waiting for pid 646216
[2026-03-07 06:00:28] 2026-03-07 04:59:48,882 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 06:00:28] 2026-03-07 04:59:48,882 | INFO     | collected zombie processes
[2026-03-07 06:00:28] 2026-03-07 04:59:48,882 | INFO     | will attempt to kill all subprocesses of pid=646216
[2026-03-07 06:00:28] 2026-03-07 04:59:49,324 | INFO     | process IDs to be killed: [646216] (in reverse order)
[2026-03-07 06:00:28] 2026-03-07 04:59:49,486 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 06:00:28] 2026-03-07 04:59:49,486 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 06:00:28] 2026-03-07 04:59:49,501 | INFO     | did not find any defunct processes belonging to 646216
[2026-03-07 06:00:28] 2026-03-07 04:59:49,514 | INFO     | did not find any defunct processes belonging to 646216
[2026-03-07 06:00:28] 2026-03-07 04:59:49,514 | INFO     | ready for new job
[2026-03-07 06:00:28] 2026-03-07 04:59:49,514 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 06:00:28] 2026-03-07 04:59:49,516 | INFO     | **************************************
[2026-03-07 06:00:28] 2026-03-07 04:59:49,516 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 06:00:28] 2026-03-07 04:59:49,516 | INFO     | **************************************
[2026-03-07 06:00:28] 2026-03-07 04:59:49,516 | INFO     | 
[2026-03-07 06:00:28] 2026-03-07 04:59:49,520 | INFO     | architecture information:
[2026-03-07 06:00:28] 2026-03-07 04:59:49,525 | INFO     | executing command: cat /etc/os-release
[2026-03-07 06:00:28] 2026-03-07 04:59:49,579 | INFO     | cat /etc/os-release:
[2026-03-07 06:00:28] NAME="CentOS Linux"
[2026-03-07 06:00:28] VERSION="7 (Core)"
[2026-03-07 06:00:28] ID="centos"
[2026-03-07 06:00:28] ID_LIKE="rhel fedora"
[2026-03-07 06:00:28] VERSION_ID="7"
[2026-03-07 06:00:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 06:00:28] ANSI_COLOR="0;31"
[2026-03-07 06:00:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 06:00:28] HOME_URL="https://www.centos.org/"
[2026-03-07 06:00:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 06:00:28] 
[2026-03-07 06:00:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 06:00:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 06:00:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 06:00:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 06:00:28] 
[2026-03-07 06:00:28] 2026-03-07 04:59:49,579 | INFO     | **************************************
[2026-03-07 06:00:28] 2026-03-07 04:59:50,082 | INFO     | executing command: df -mP /var/lib/boinc/var/slot20/slots/2
[2026-03-07 06:00:28] 2026-03-07 04:59:50,104 | INFO     | sufficient remaining disk space (21052260352 B)
[2026-03-07 06:00:28] 2026-03-07 04:59:50,104 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 06:00:28] 2026-03-07 04:59:50,105 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 06:00:28] 2026-03-07 04:59:50,105 | INFO     | update_server=False
[2026-03-07 06:00:28] 2026-03-07 04:59:50,105 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 06:00:28] 2026-03-07 04:59:50,105 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 06:00:28] 2026-03-07 04:59:50,105 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 06:00:28] 2026-03-07 04:59:50,106 | INFO     | aborting loop
[2026-03-07 06:00:28] 2026-03-07 04:59:50,542 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 06:00:28] 2026-03-07 04:59:50,594 | INFO     | all data control threads have been joined
[2026-03-07 06:00:28] 2026-03-07 04:59:51,057 | INFO     | all job control threads have been joined
[2026-03-07 06:00:28] 2026-03-07 04:59:51,110 | INFO     | [job] retrieve thread has finished
[2026-03-07 06:00:28] 2026-03-07 04:59:51,111 | INFO     | [job] job monitor thread has finished
[2026-03-07 06:00:28] 2026-03-07 04:59:51,167 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 06:00:28] 2026-03-07 04:59:51,533 | INFO     | [payload] failed_post thread has finished
[2026-03-07 06:00:28] 2026-03-07 04:59:51,559 | INFO     | [job] validate thread has finished
[2026-03-07 06:00:28] 2026-03-07 04:59:51,600 | INFO     | [data] control thread has finished
[2026-03-07 06:00:28] 2026-03-07 04:59:51,603 | INFO     | all payload control threads have been joined
[2026-03-07 06:00:28] 2026-03-07 04:59:51,959 | INFO     | [data] copytool_in thread has finished
[2026-03-07 06:00:28] 2026-03-07 04:59:51,977 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 06:00:28] 2026-03-07 04:59:52,063 | INFO     | [job] control thread has finished
[2026-03-07 06:00:28] 2026-03-07 04:59:52,537 | INFO     | [payload] validate_post thread has finished
[2026-03-07 06:00:28] 2026-03-07 04:59:52,548 | INFO     | [data] copytool_out thread has finished
[2026-03-07 06:00:28] 2026-03-07 04:59:52,557 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 06:00:28] 2026-03-07 04:59:52,608 | INFO     | [payload] control thread has finished
[2026-03-07 06:00:28] 2026-03-07 04:59:52,834 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 06:00:28] 2026-03-07 04:59:53,839 | INFO     | [job] queue monitor thread has finished
[2026-03-07 06:00:28] 2026-03-07 04:59:54,110 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 06:00:28] 2026-03-07 05:00:00,377 | INFO     | job.realtimelogging is not enabled
[2026-03-07 06:00:28] 2026-03-07 05:00:01,382 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 06:00:28] 2026-03-07 05:00:21,098 | INFO     | PID=641377 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-07 06:00:28] 2026-03-07 05:00:21,098 | INFO     | .. there are 13 such processes running
[2026-03-07 06:00:28] 2026-03-07 05:00:21,098 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 06:00:28] 2026-03-07 05:00:21,098 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 06:00:28] 2026-03-07 05:00:21,098 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 06:00:28] 2026-03-07 05:00:21,816 | INFO     | [monitor] cgroup control has ended
[2026-03-07 06:00:28] 2026-03-07 05:00:22,354 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22782776305472)>', '<ExcThread(monitor, started 22782531602176)>']
[2026-03-07 06:00:28] 2026-03-07 05:00:23,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 06:00:28] 2026-03-07 05:00:23,109 | INFO     | [monitor] control thread has ended
[2026-03-07 06:00:28] 2026-03-07 05:00:27,379 | INFO     | all workflow threads have been joined
[2026-03-07 06:00:28] 2026-03-07 05:00:27,380 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 06:00:28] 2026-03-07 05:00:27,380 | INFO     | traces error code: 0
[2026-03-07 06:00:28] 2026-03-07 05:00:27,380 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 06:00:28] 2026-03-07 05:00:27,530 [wrapper] ==== pilot stdout END ====
[2026-03-07 06:00:28] 2026-03-07 05:00:27,536 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 06:00:28] 2026-03-07 05:00:27,557 [wrapper] pilotpid: 641377
[2026-03-07 06:00:28] 2026-03-07 05:00:27,564 [wrapper] Pilot exit status: 0
[2026-03-07 06:00:28] 2026-03-07 05:00:27,648 [wrapper] pandaids: 7042885996
[2026-03-07 06:00:28] 2026-03-07 05:00:27,741 [wrapper] cleanup supervisor_pilot  949534 641379
[2026-03-07 06:00:28] 2026-03-07 05:00:27,759 [wrapper] Test setup, not cleaning
[2026-03-07 06:00:28] 2026-03-07 05:00:27,782 [wrapper] apfmon messages muted
[2026-03-07 06:00:28] 2026-03-07 05:00:27,785 [wrapper] ==== wrapper stdout END ====
[2026-03-07 06:00:28] 2026-03-07 05:00:27,792 [wrapper] ==== wrapper stderr END ====
[2026-03-07 06:00:28]  *** Error codes and diagnostics ***
[2026-03-07 06:00:28]     "exeErrorCode": 0,
[2026-03-07 06:00:28]     "exeErrorDiag": "",
[2026-03-07 06:00:28]     "pilotErrorCode": 0,
[2026-03-07 06:00:28]     "pilotErrorDiag": "",
[2026-03-07 06:00:28]  *** Listing of results directory ***
[2026-03-07 06:00:28] total 413540
[2026-03-07 06:00:28] -rw-r--r--. 1 boinc boinc      5111 Mar  6 05:56 queuedata.json
[2026-03-07 06:00:28] -rw-r--r--. 1 boinc boinc    584627 Mar  6 05:56 pilot3.tar.gz
[2026-03-07 06:00:28] -rwx------. 1 boinc boinc     36322 Mar  6 05:56 runpilot2-wrapper.sh
[2026-03-07 06:00:28] -rw-r--r--. 1 boinc boinc       100 Mar  7 02:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 06:00:28] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 02:06 run_atlas
[2026-03-07 06:00:28] -rw-r--r--. 1 boinc boinc       105 Mar  7 02:06 job.xml
[2026-03-07 06:00:28] -rw-r--r--. 2 boinc boinc 213271247 Mar  7 02:06 EVNT.48966985._000215.pool.root.1
[2026-03-07 06:00:28] -rw-r--r--. 1 boinc boinc      6562 Mar  7 02:06 init_data.xml
[2026-03-07 06:00:28] -rw-r--r--. 2 boinc boinc     15845 Mar  7 02:06 start_atlas.sh
[2026-03-07 06:00:28] drwxrwx--x. 2 boinc boinc      4096 Mar  7 02:06 shared
[2026-03-07 06:00:28] -rw-r--r--. 2 boinc boinc    597964 Mar  7 02:06 input.tar.gz
[2026-03-07 06:00:28] -rw-r--r--. 1 boinc boinc         0 Mar  7 02:06 boinc_lockfile
[2026-03-07 06:00:28] -rw-r--r--. 1 boinc boinc      2589 Mar  7 02:06 pandaJob.out
[2026-03-07 06:00:28] -rw-------. 1 boinc boinc    999186 Mar  7 02:06 agis_schedconf.cvmfs.json
[2026-03-07 06:00:28] -rw-------. 1 boinc boinc       452 Mar  7 02:06 workernode_map.json
[2026-03-07 06:00:28] drwx------. 5 boinc boinc      4096 Mar  7 02:06 pilot3
[2026-03-07 06:00:28] -rw-------. 1 boinc boinc 201564152 Mar  7 05:59 HITS.48966988._001628.pool.root.1
[2026-03-07 06:00:28] -rw-------. 1 boinc boinc        95 Mar  7 05:59 pilot_heartbeat.json
[2026-03-07 06:00:28] -rw-r--r--. 1 boinc boinc       529 Mar  7 05:59 boinc_task_state.xml
[2026-03-07 06:00:28] -rw-------. 1 boinc boinc      1045 Mar  7 05:59 memory_monitor_summary.json
[2026-03-07 06:00:28] -rw-------. 1 boinc boinc   1521291 Mar  7 05:59 agis_ddmendpoints.agis.ALL.json
[2026-03-07 06:00:28] -rw-------. 1 boinc boinc    386009 Mar  7 05:59 log.48966988._001628.job.log.tgz.1
[2026-03-07 06:00:28] -rw-------. 1 boinc boinc      6399 Mar  7 05:59 heartbeat.json
[2026-03-07 06:00:28] -rw-r--r--. 1 boinc boinc        27 Mar  7 05:59 wrapper_checkpoint.txt
[2026-03-07 06:00:28] -rw-r--r--. 1 boinc boinc      8192 Mar  7 05:59 boinc_mmap_file
[2026-03-07 06:00:28] -rw-------. 1 boinc boinc      4900 Mar  7 06:00 pilotlog.txt
[2026-03-07 06:00:28] -rw-------. 1 boinc boinc   1957185 Mar  7 06:00 log.48966988._001628.job.log.1
[2026-03-07 06:00:28] -rw-------. 1 boinc boinc       357 Mar  7 06:00 output.list
[2026-03-07 06:00:28] -rw-r--r--. 1 boinc boinc       620 Mar  7 06:00 runtime_log
[2026-03-07 06:00:28] -rw-------. 1 boinc boinc   2365440 Mar  7 06:00 result.tar.gz
[2026-03-07 06:00:28] -rw-r--r--. 1 boinc boinc      9205 Mar  7 06:00 runtime_log.err
[2026-03-07 06:00:28] -rw-------. 1 boinc boinc       665 Mar  7 06:00 0TrMDmDQcI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmeKQLDmiG8m4m.diag
[2026-03-07 06:00:28] -rw-r--r--. 1 boinc boinc     20628 Mar  7 06:00 stderr.txt
[2026-03-07 06:00:28] HITS file was successfully produced:
[2026-03-07 06:00:28] -rw-------. 1 boinc boinc 201564152 Mar  7 05:59 shared/HITS.pool.root.1
[2026-03-07 06:00:28]  *** Contents of shared directory: ***
[2026-03-07 06:00:28] total 408036
[2026-03-07 06:00:28] -rw-r--r--. 2 boinc boinc 213271247 Mar  7 02:06 ATLAS.root_0
[2026-03-07 06:00:28] -rw-r--r--. 2 boinc boinc     15845 Mar  7 02:06 start_atlas.sh
[2026-03-07 06:00:28] -rw-r--r--. 2 boinc boinc    597964 Mar  7 02:06 input.tar.gz
[2026-03-07 06:00:28] -rw-------. 1 boinc boinc 201564152 Mar  7 05:59 HITS.pool.root.1
[2026-03-07 06:00:28] -rw-------. 1 boinc boinc   2365440 Mar  7 06:00 result.tar.gz
06:00:29 (637600): run_atlas exited; CPU time 53531.916143
06:00:29 (637600): called boinc_finish(0)

</stderr_txt>
]]>

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