Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:31:42 (4072757): wrapper (7.7.26015): starting
15:31:42 (4072757): wrapper: running run_atlas (--nthreads 4)
[2026-03-06 15:31:42] Arguments: --nthreads 4
[2026-03-06 15:31:42] Threads: 4
[2026-03-06 15:31:42] Checking for CVMFS
[2026-03-06 15:31:42] No cvmfs_config command found, will try listing directly
[2026-03-06 15:31:42] CVMFS is ok
[2026-03-06 15:31:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 15:31:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 15:31:42] Further information can be found at the LHC@home message board.
[2026-03-06 15:31:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 15:31:42] Checking for apptainer binary...
[2026-03-06 15:31:42] which: no apptainer in ((null))
[2026-03-06 15:31:42] apptainer is not installed, using version from CVMFS
[2026-03-06 15:31:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 15:31:42] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot84/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-06 15:31:42] apptainer works
[2026-03-06 15:31:42] Set ATHENA_PROC_NUMBER=4
[2026-03-06 15:31:42] Set ATHENA_CORE_NUMBER=4
[2026-03-06 15:31:42] Starting ATLAS job with PandaID=7042830639
[2026-03-06 15:31:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot84/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 18:45:14]  *** The last 200 lines of the pilot log: ***
[2026-03-06 18:45:14] 2026-03-06 17:42:44,545 | INFO     | log transfer has been attempted: DONE
[2026-03-06 18:45:14] 2026-03-06 17:42:44,545 | INFO     | job 7042830639 has finished - writing final server update
[2026-03-06 18:45:14] 2026-03-06 17:42:44,545 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2919811/.job.ad'
[2026-03-06 18:45:14] 2026-03-06 17:42:44,546 | INFO     | total number of processed events: 400 (read)
[2026-03-06 18:45:14] 2026-03-06 17:42:44,563 | INFO     | using path: /var/lib/boinc/var/slot84/slots/3/PanDA_Pilot-7042830639/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 18:45:14] 2026-03-06 17:42:44,564 | INFO     | extracted standard info from prmon json
[2026-03-06 18:45:14] 2026-03-06 17:42:44,564 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 18:45:14] 2026-03-06 17:42:44,564 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 18:45:14] 2026-03-06 17:42:44,564 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 18:45:14] 2026-03-06 17:42:44,564 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 18:45:14] 2026-03-06 17:42:44,566 | INFO     | fitting pss+swap vs Time
[2026-03-06 18:45:14] 2026-03-06 17:42:44,567 | INFO     | sum of square deviations: 2060343747.0
[2026-03-06 18:45:14] 2026-03-06 17:42:44,567 | INFO     | sum of deviations: 8158184651.999996
[2026-03-06 18:45:14] 2026-03-06 17:42:44,567 | INFO     | mean x: 1772813239.5
[2026-03-06 18:45:14] 2026-03-06 17:42:44,567 | INFO     | mean y: 2315740.638297872
[2026-03-06 18:45:14] 2026-03-06 17:42:44,567 | INFO     | intersect: -7017356477.849666
[2026-03-06 18:45:14] 2026-03-06 17:42:44,568 | INFO     | chi2: 1.917636098207221
[2026-03-06 18:45:14] 2026-03-06 17:42:44,568 | INFO     | sum of square deviations: 1900284932.0
[2026-03-06 18:45:14] 2026-03-06 17:42:44,568 | INFO     | sum of deviations: 19691225658.0
[2026-03-06 18:45:14] 2026-03-06 17:42:44,568 | INFO     | mean x: 1772813087.0
[2026-03-06 18:45:14] 2026-03-06 17:42:44,568 | INFO     | mean y: 2326484.475409836
[2026-03-06 18:45:14] 2026-03-06 17:42:44,568 | INFO     | intersect: -18368004173.691692
[2026-03-06 18:45:14] 2026-03-06 17:42:44,569 | INFO     | chi2: 1.1017180220320089
[2026-03-06 18:45:14] 2026-03-06 17:42:44,569 | INFO     | current chi2=1.1017180220320089 (change=42.5481183284986 %)
[2026-03-06 18:45:14] 2026-03-06 17:42:44,569 | INFO     | sum of square deviations: 1748737904.5
[2026-03-06 18:45:14] 2026-03-06 17:42:44,569 | INFO     | sum of deviations: 19096374520.0
[2026-03-06 18:45:14] 2026-03-06 17:42:44,569 | INFO     | mean x: 1772812934.5
[2026-03-06 18:45:14] 2026-03-06 17:42:44,569 | INFO     | mean y: 2325885.6966292136
[2026-03-06 18:45:14] 2026-03-06 17:42:44,569 | INFO     | intersect: -19356950117.86885
[2026-03-06 18:45:14] 2026-03-06 17:42:44,570 | INFO     | chi2: 1.102305646193001
[2026-03-06 18:45:14] 2026-03-06 17:42:44,570 | INFO     | current chi2=1.102305646193001 (change=-0.05333707439116801 %)
[2026-03-06 18:45:14] 2026-03-06 17:42:44,570 | INFO     | right removable region: 177
[2026-03-06 18:45:14] 2026-03-06 17:42:44,570 | INFO     | sum of square deviations: 1900284932.0
[2026-03-06 18:45:14] 2026-03-06 17:42:44,570 | INFO     | sum of deviations: -11034858093.0
[2026-03-06 18:45:14] 2026-03-06 17:42:44,570 | INFO     | mean x: 1772813392.0
[2026-03-06 18:45:14] 2026-03-06 17:42:44,570 | INFO     | mean y: 2333754.2513661203
[2026-03-06 18:45:14] 2026-03-06 17:42:44,570 | INFO     | intersect: 10296971088.190916
[2026-03-06 18:45:14] 2026-03-06 17:42:44,571 | INFO     | chi2: 0.8365255381648881
[2026-03-06 18:45:14] 2026-03-06 17:42:44,571 | INFO     | current chi2=0.8365255381648881 (change=56.37725327829677 %)
[2026-03-06 18:45:14] 2026-03-06 17:42:44,571 | INFO     | sum of square deviations: 1748737904.5
[2026-03-06 18:45:14] 2026-03-06 17:42:44,571 | INFO     | sum of deviations: -11405395181.5
[2026-03-06 18:45:14] 2026-03-06 17:42:44,571 | INFO     | mean x: 1772813544.5
[2026-03-06 18:45:14] 2026-03-06 17:42:44,571 | INFO     | mean y: 2334122.915730337
[2026-03-06 18:45:14] 2026-03-06 17:42:44,571 | INFO     | intersect: 11564752371.017607
[2026-03-06 18:45:14] 2026-03-06 17:42:44,572 | INFO     | chi2: 0.8362279587070038
[2026-03-06 18:45:14] 2026-03-06 17:42:44,572 | INFO     | current chi2=0.8362279587070038 (change=0.03557326636279773 %)
[2026-03-06 18:45:14] 2026-03-06 17:42:44,572 | INFO     | left removable region: 20
[2026-03-06 18:45:14] 2026-03-06 17:42:44,572 | INFO     | sum of square deviations: 1199940638.0
[2026-03-06 18:45:14] 2026-03-06 17:42:44,572 | INFO     | sum of deviations: 353424483.99999994
[2026-03-06 18:45:14] 2026-03-06 17:42:44,572 | INFO     | mean x: 1772813514.0
[2026-03-06 18:45:14] 2026-03-06 17:42:44,572 | INFO     | mean y: 2345462.312101911
[2026-03-06 18:45:14] 2026-03-06 17:42:44,572 | INFO     | intersect: -519810119.03231174
[2026-03-06 18:45:14] 2026-03-06 17:42:44,572 | INFO     | chi2: 0.0016231593295613033
[2026-03-06 18:45:14] 2026-03-06 17:42:44,572 | INFO     | current memory leak: 0.29 B/s (using 157 data points, chi2=0.00)
[2026-03-06 18:45:14] 2026-03-06 17:42:44,573 | INFO     | could have reported an average CPU frequency of 3581 MHz (10 samples)
[2026-03-06 18:45:14] 2026-03-06 17:42:44,573 | INFO     | ..............................
[2026-03-06 18:45:14] 2026-03-06 17:42:44,573 | INFO     | . Timing measurements:
[2026-03-06 18:45:14] 2026-03-06 17:42:44,573 | INFO     | . get job = 0 s
[2026-03-06 18:45:14] 2026-03-06 17:42:44,573 | INFO     | . initial setup = 5 s
[2026-03-06 18:45:14] 2026-03-06 17:42:44,573 | INFO     | . payload setup = 5 s
[2026-03-06 18:45:14] 2026-03-06 17:42:44,573 | INFO     | . stage-in = 0 s
[2026-03-06 18:45:14] 2026-03-06 17:42:44,573 | INFO     | . payload execution = 11424 s
[2026-03-06 18:45:14] 2026-03-06 17:42:44,573 | INFO     | . stage-out = 0 s
[2026-03-06 18:45:14] 2026-03-06 17:42:44,573 | INFO     | . log creation = 0 s
[2026-03-06 18:45:14] 2026-03-06 17:42:44,573 | INFO     | ..............................
[2026-03-06 18:45:14] 2026-03-06 17:42:44,621 | INFO     | 
[2026-03-06 18:45:14] 2026-03-06 17:42:44,622 | INFO     | job summary report
[2026-03-06 18:45:14] 2026-03-06 17:42:44,622 | INFO     | --------------------------------------------------
[2026-03-06 18:45:14] 2026-03-06 17:42:44,622 | INFO     | PanDA job id: 7042830639
[2026-03-06 18:45:14] 2026-03-06 17:42:44,622 | INFO     | task id: 48966951
[2026-03-06 18:45:14] 2026-03-06 17:42:44,622 | INFO     | errors: (none)
[2026-03-06 18:45:14] 2026-03-06 17:42:44,622 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 18:45:14] 2026-03-06 17:42:44,622 | INFO     | pilot state: finished 
[2026-03-06 18:45:14] 2026-03-06 17:42:44,622 | INFO     | transexitcode: 0
[2026-03-06 18:45:14] 2026-03-06 17:42:44,622 | INFO     | exeerrorcode: 0
[2026-03-06 18:45:14] 2026-03-06 17:42:44,622 | INFO     | exeerrordiag: 
[2026-03-06 18:45:14] 2026-03-06 17:42:44,622 | INFO     | exitcode: 0
[2026-03-06 18:45:14] 2026-03-06 17:42:44,622 | INFO     | exitmsg: OK
[2026-03-06 18:45:14] 2026-03-06 17:42:44,622 | INFO     | cpuconsumptiontime: 44087 s
[2026-03-06 18:45:14] 2026-03-06 17:42:44,622 | INFO     | nevents: 400
[2026-03-06 18:45:14] 2026-03-06 17:42:44,622 | INFO     | neventsw: 0
[2026-03-06 18:45:14] 2026-03-06 17:42:44,622 | INFO     | pid: 4083634
[2026-03-06 18:45:14] 2026-03-06 17:42:44,622 | INFO     | pgrp: 4083634
[2026-03-06 18:45:14] 2026-03-06 17:42:44,622 | INFO     | corecount: 4
[2026-03-06 18:45:14] 2026-03-06 17:42:44,622 | INFO     | event service: False
[2026-03-06 18:45:14] 2026-03-06 17:42:44,622 | INFO     | sizes: {0: 2295784, 10: 2295784, 11434: 2325064, 11436: 2334140, 11438: 2334278}
[2026-03-06 18:45:14] 2026-03-06 17:42:44,622 | INFO     | --------------------------------------------------
[2026-03-06 18:45:14] 2026-03-06 17:42:44,622 | INFO     | 
[2026-03-06 18:45:14] 2026-03-06 17:42:44,622 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot84/slots/3
[2026-03-06 18:45:14] 2026-03-06 17:42:44,640 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 18:45:14] 2026-03-06 17:42:44,640 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 18:45:14] 2026-03-06 17:42:44,640 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 18:45:14] 2026-03-06 17:42:44,640 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 18:45:14] 2026-03-06 17:42:44,640 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 18:45:14] 2026-03-06 17:42:44,641 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 18:45:14] 2026-03-06 17:42:44,641 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 18:45:14] 2026-03-06 17:42:44,641 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 18:45:14] 2026-03-06 17:42:44,641 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 18:45:14] 2026-03-06 17:42:44,641 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 18:45:14] 2026-03-06 17:42:44,641 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 18:45:14] 2026-03-06 17:42:44,641 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 18:45:14] 2026-03-06 17:42:44,641 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 18:45:14] 2026-03-06 17:42:44,641 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 18:45:14] 2026-03-06 17:42:44,641 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 18:45:14] 2026-03-06 17:42:44,641 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 18:45:14] 2026-03-06 17:42:44,641 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 18:45:14] 2026-03-06 17:42:44,641 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 18:45:14] 2026-03-06 17:42:44,641 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 18:45:14] 2026-03-06 17:42:44,641 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 18:45:14] 2026-03-06 17:42:44,641 | INFO     | job 7042830639 has completed (purged errors)
[2026-03-06 18:45:14] 2026-03-06 17:42:44,641 | INFO     | overall cleanup function is called
[2026-03-06 18:45:14] 2026-03-06 17:42:45,652 | INFO     | --- collectZombieJob: --- 10, [4083634]
[2026-03-06 18:45:14] 2026-03-06 17:42:45,652 | INFO     | zombie collector waiting for pid 4083634
[2026-03-06 18:45:14] 2026-03-06 17:42:45,652 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 18:45:14] 2026-03-06 17:42:45,652 | INFO     | collected zombie processes
[2026-03-06 18:45:14] 2026-03-06 17:42:45,652 | INFO     | will attempt to kill all subprocesses of pid=4083634
[2026-03-06 18:45:14] 2026-03-06 17:42:46,109 | INFO     | process IDs to be killed: [4083634] (in reverse order)
[2026-03-06 18:45:14] 2026-03-06 17:42:46,348 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 18:45:14] 2026-03-06 17:42:46,349 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 18:45:14] 2026-03-06 17:42:46,380 | INFO     | did not find any defunct processes belonging to 4083634
[2026-03-06 18:45:14] 2026-03-06 17:42:46,412 | INFO     | did not find any defunct processes belonging to 4083634
[2026-03-06 18:45:14] 2026-03-06 17:42:46,412 | INFO     | ready for new job
[2026-03-06 18:45:14] 2026-03-06 17:42:46,412 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 18:45:14] 2026-03-06 17:42:46,414 | INFO     | **************************************
[2026-03-06 18:45:14] 2026-03-06 17:42:46,414 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 18:45:14] 2026-03-06 17:42:46,414 | INFO     | **************************************
[2026-03-06 18:45:14] 2026-03-06 17:42:46,414 | INFO     | 
[2026-03-06 18:45:14] 2026-03-06 17:42:46,421 | INFO     | architecture information:
[2026-03-06 18:45:14] 2026-03-06 17:42:46,421 | INFO     | executing command: cat /etc/os-release
[2026-03-06 18:45:14] 2026-03-06 17:42:46,434 | INFO     | cat /etc/os-release:
[2026-03-06 18:45:14] NAME="CentOS Linux"
[2026-03-06 18:45:14] VERSION="7 (Core)"
[2026-03-06 18:45:14] ID="centos"
[2026-03-06 18:45:14] ID_LIKE="rhel fedora"
[2026-03-06 18:45:14] VERSION_ID="7"
[2026-03-06 18:45:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 18:45:14] ANSI_COLOR="0;31"
[2026-03-06 18:45:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 18:45:14] HOME_URL="https://www.centos.org/"
[2026-03-06 18:45:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 18:45:14] 
[2026-03-06 18:45:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 18:45:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 18:45:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 18:45:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 18:45:14] 
[2026-03-06 18:45:14] 2026-03-06 17:42:46,435 | INFO     | **************************************
[2026-03-06 18:45:14] 2026-03-06 17:42:46,937 | INFO     | executing command: df -mP /var/lib/boinc/var/slot84/slots/3
[2026-03-06 18:45:14] 2026-03-06 17:42:46,952 | INFO     | sufficient remaining disk space (20626538496 B)
[2026-03-06 18:45:14] 2026-03-06 17:42:46,952 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 18:45:14] 2026-03-06 17:42:46,953 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 18:45:14] 2026-03-06 17:42:46,953 | INFO     | update_server=False
[2026-03-06 18:45:14] 2026-03-06 17:42:46,953 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 18:45:14] 2026-03-06 17:42:46,953 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 18:45:14] 2026-03-06 17:42:46,953 | INFO     | aborting loop
[2026-03-06 18:45:14] 2026-03-06 17:42:46,953 | INFO     | all job control threads have been joined
[2026-03-06 18:45:14] 2026-03-06 17:42:47,278 | INFO     | all data control threads have been joined
[2026-03-06 18:45:14] 2026-03-06 17:42:47,946 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 18:45:14] 2026-03-06 17:42:47,957 | INFO     | [job] retrieve thread has finished
[2026-03-06 18:45:14] 2026-03-06 17:42:47,958 | INFO     | [job] job monitor thread has finished
[2026-03-06 18:45:14] 2026-03-06 17:42:47,958 | INFO     | [job] control thread has finished
[2026-03-06 18:45:14] 2026-03-06 17:42:48,008 | INFO     | [data] copytool_in thread has finished
[2026-03-06 18:45:14] 2026-03-06 17:42:48,063 | INFO     | [payload] failed_post thread has finished
[2026-03-06 18:45:14] 2026-03-06 17:42:48,175 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 18:45:14] 2026-03-06 17:42:48,283 | INFO     | [data] control thread has finished
[2026-03-06 18:45:14] 2026-03-06 17:42:48,422 | INFO     | all payload control threads have been joined
[2026-03-06 18:45:14] 2026-03-06 17:42:48,718 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 18:45:14] 2026-03-06 17:42:48,748 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 18:45:14] 2026-03-06 17:42:48,838 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 18:45:14] 2026-03-06 17:42:48,949 | INFO     | [job] validate thread has finished
[2026-03-06 18:45:14] 2026-03-06 17:42:49,131 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 18:45:14] 2026-03-06 17:42:49,299 | INFO     | [payload] validate_post thread has finished
[2026-03-06 18:45:14] 2026-03-06 17:42:49,427 | INFO     | [payload] control thread has finished
[2026-03-06 18:45:14] 2026-03-06 17:42:49,632 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 18:45:14] 2026-03-06 17:42:49,952 | INFO     | [data] copytool_out thread has finished
[2026-03-06 18:45:14] 2026-03-06 17:42:50,637 | INFO     | [job] queue monitor thread has finished
[2026-03-06 18:45:14] 2026-03-06 17:42:52,723 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 18:45:14] 2026-03-06 17:43:14,184 | INFO     | [monitor] cgroup control has ended
[2026-03-06 18:45:14] 2026-03-06 17:43:15,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22847256700736)>', '<ExcThread(monitor, started 22846942209792)>']
[2026-03-06 18:45:14] 2026-03-06 17:43:17,577 | INFO     | PID=4077506 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 18:45:14] 2026-03-06 17:43:17,577 | INFO     | .. there are 44 such processes running
[2026-03-06 18:45:14] 2026-03-06 17:43:17,577 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 18:45:14] 2026-03-06 17:43:17,578 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 18:45:14] 2026-03-06 17:43:17,578 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 18:45:14] 2026-03-06 17:43:17,578 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 18:45:14] 2026-03-06 17:43:17,578 | INFO     | [monitor] control thread has ended
[2026-03-06 18:45:14] 2026-03-06 17:43:20,235 | INFO     | all workflow threads have been joined
[2026-03-06 18:45:14] 2026-03-06 17:43:20,235 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 18:45:14] 2026-03-06 17:43:20,235 | INFO     | traces error code: 0
[2026-03-06 18:45:14] 2026-03-06 17:43:20,236 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 18:45:14] 2026-03-06 17:43:20,461 [wrapper] ==== pilot stdout END ====
[2026-03-06 18:45:14] 2026-03-06 17:43:20,463 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 18:45:14] 2026-03-06 17:43:20,465 [wrapper] pilotpid: 4077506
[2026-03-06 18:45:14] 2026-03-06 17:43:20,466 [wrapper] Pilot exit status: 0
[2026-03-06 18:45:14] 2026-03-06 17:43:20,475 [wrapper] pandaids: 7042830639
[2026-03-06 18:45:14] 2026-03-06 17:43:20,607 [wrapper] cleanup supervisor_pilot 1437585 4077507
[2026-03-06 18:45:14] 2026-03-06 17:43:20,609 [wrapper] Test setup, not cleaning
[2026-03-06 18:45:14] 2026-03-06 17:43:20,610 [wrapper] apfmon messages muted
[2026-03-06 18:45:14] 2026-03-06 17:43:20,612 [wrapper] ==== wrapper stdout END ====
[2026-03-06 18:45:14] 2026-03-06 17:43:20,613 [wrapper] ==== wrapper stderr END ====
[2026-03-06 18:45:14]  *** Error codes and diagnostics ***
[2026-03-06 18:45:14]     "exeErrorCode": 0,
[2026-03-06 18:45:14]     "exeErrorDiag": "",
[2026-03-06 18:45:14]     "pilotErrorCode": 0,
[2026-03-06 18:45:14]     "pilotErrorDiag": "",
[2026-03-06 18:45:14]  *** Listing of results directory ***
[2026-03-06 18:45:14] total 506960
[2026-03-06 18:45:14] -rw-r--r--. 1 boinc boinc    584627 Mar  6 04:41 pilot3.tar.gz
[2026-03-06 18:45:14] -rw-r--r--. 1 boinc boinc      5111 Mar  6 05:16 queuedata.json
[2026-03-06 18:45:14] -rwx------. 1 boinc boinc     36322 Mar  6 05:18 runpilot2-wrapper.sh
[2026-03-06 18:45:14] -rw-r--r--. 1 boinc boinc       100 Mar  6 15:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 18:45:14] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 15:31 run_atlas
[2026-03-06 18:45:14] -rw-r--r--. 1 boinc boinc       105 Mar  6 15:31 job.xml
[2026-03-06 18:45:14] -rw-r--r--. 2 boinc boinc    597935 Mar  6 15:31 input.tar.gz
[2026-03-06 18:45:14] -rw-r--r--. 1 boinc boinc      6705 Mar  6 15:31 init_data.xml
[2026-03-06 18:45:14] -rw-r--r--. 2 boinc boinc 236237035 Mar  6 15:31 EVNT.48966948._000007.pool.root.1
[2026-03-06 18:45:14] -rw-r--r--. 2 boinc boinc     15845 Mar  6 15:31 start_atlas.sh
[2026-03-06 18:45:14] drwxrwx--x. 2 boinc boinc      4096 Mar  6 15:31 shared
[2026-03-06 18:45:14] -rw-r--r--. 1 boinc boinc         0 Mar  6 15:31 boinc_lockfile
[2026-03-06 18:45:14] -rw-r--r--. 1 boinc boinc      2537 Mar  6 15:31 pandaJob.out
[2026-03-06 18:45:14] -rw-------. 1 boinc boinc    998899 Mar  6 15:31 agis_schedconf.cvmfs.json
[2026-03-06 18:45:14] -rw-------. 1 boinc boinc       443 Mar  6 15:31 workernode_map.json
[2026-03-06 18:45:14] drwx------. 5 boinc boinc      4096 Mar  6 15:31 pilot3
[2026-03-06 18:45:14] -rw-r--r--. 1 boinc boinc       529 Mar  6 18:42 boinc_task_state.xml
[2026-03-06 18:45:14] -rw-------. 1 boinc boinc 275012167 Mar  6 18:42 HITS.48966951._000081.pool.root.1
[2026-03-06 18:45:14] -rw-------. 1 boinc boinc      1032 Mar  6 18:42 memory_monitor_summary.json
[2026-03-06 18:45:14] -rw-------. 1 boinc boinc        95 Mar  6 18:42 pilot_heartbeat.json
[2026-03-06 18:45:14] -rw-------. 1 boinc boinc   1521291 Mar  6 18:42 agis_ddmendpoints.agis.ALL.json
[2026-03-06 18:45:14] -rw-------. 1 boinc boinc    356585 Mar  6 18:42 log.48966951._000081.job.log.tgz.1
[2026-03-06 18:45:14] -rw-------. 1 boinc boinc      6349 Mar  6 18:42 heartbeat.json
[2026-03-06 18:45:14] -rw-------. 1 boinc boinc      4829 Mar  6 18:43 pilotlog.txt
[2026-03-06 18:45:14] -rw-------. 1 boinc boinc   1610341 Mar  6 18:43 log.48966951._000081.job.log.1
[2026-03-06 18:45:14] -rw-------. 1 boinc boinc       357 Mar  6 18:43 output.list
[2026-03-06 18:45:14] -rw-r--r--. 1 boinc boinc       620 Mar  6 18:43 runtime_log
[2026-03-06 18:45:14] -rw-------. 1 boinc boinc   1986560 Mar  6 18:43 result.tar.gz
[2026-03-06 18:45:14] -rw-r--r--. 1 boinc boinc      9205 Mar  6 18:43 runtime_log.err
[2026-03-06 18:45:14] -rw-------. 1 boinc boinc       665 Mar  6 18:43 KNDMDmoobI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmTDQLDmL9ZVnn.diag
[2026-03-06 18:45:14] -rw-r--r--. 1 boinc boinc        27 Mar  6 18:44 wrapper_checkpoint.txt
[2026-03-06 18:45:14] -rw-r--r--. 1 boinc boinc      8192 Mar  6 18:45 boinc_mmap_file
[2026-03-06 18:45:14] -rw-r--r--. 1 boinc boinc     20863 Mar  6 18:45 stderr.txt
[2026-03-06 18:45:14] HITS file was successfully produced:
[2026-03-06 18:45:14] -rw-------. 1 boinc boinc 275012167 Mar  6 18:42 shared/HITS.pool.root.1
[2026-03-06 18:45:14]  *** Contents of shared directory: ***
[2026-03-06 18:45:14] total 501820
[2026-03-06 18:45:14] -rw-r--r--. 2 boinc boinc    597935 Mar  6 15:31 input.tar.gz
[2026-03-06 18:45:14] -rw-r--r--. 2 boinc boinc 236237035 Mar  6 15:31 ATLAS.root_0
[2026-03-06 18:45:14] -rw-r--r--. 2 boinc boinc     15845 Mar  6 15:31 start_atlas.sh
[2026-03-06 18:45:14] -rw-------. 1 boinc boinc 275012167 Mar  6 18:42 HITS.pool.root.1
[2026-03-06 18:45:14] -rw-------. 1 boinc boinc   1986560 Mar  6 18:43 result.tar.gz
18:45:15 (4072757): run_atlas exited; CPU time 44642.568019
18:45:15 (4072757): called boinc_finish(0)

</stderr_txt>
]]>

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