Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:40:52 (2353005): wrapper (7.7.26015): starting
04:40:52 (2353005): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 04:40:52] Arguments: --nthreads 4
[2026-03-07 04:40:53] Threads: 4
[2026-03-07 04:40:53] Checking for CVMFS
[2026-03-07 04:40:53] No cvmfs_config command found, will try listing directly
[2026-03-07 04:40:53] CVMFS is ok
[2026-03-07 04:40:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 04:40:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 04:40:53] Further information can be found at the LHC@home message board.
[2026-03-07 04:40:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 04:40:53] Checking for apptainer binary...
[2026-03-07 04:40:53] which: no apptainer in ((null))
[2026-03-07 04:40:53] apptainer is not installed, using version from CVMFS
[2026-03-07 04:40:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 04:40:53] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot56/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-07 04:40:53] apptainer works
[2026-03-07 04:40:53] Set ATHENA_PROC_NUMBER=4
[2026-03-07 04:40:53] Set ATHENA_CORE_NUMBER=4
[2026-03-07 04:40:53] Starting ATLAS job with PandaID=7042858056
[2026-03-07 04:40:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot56/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 06:22:21]  *** The last 200 lines of the pilot log: ***
[2026-03-07 06:22:21]  is_altstaged=None
[2026-03-07 06:22:21]  is_tar=False
[2026-03-07 06:22:21]  lfn=log.48966988._001270.job.log.tgz.1
[2026-03-07 06:22:21]  mtime=0
[2026-03-07 06:22:21]  protocol_id=None
[2026-03-07 06:22:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 06:22:21]  replicas=None
[2026-03-07 06:22:21]  scope=mc23_13p6TeV
[2026-03-07 06:22:21]  status=None
[2026-03-07 06:22:21]  status_code=0
[2026-03-07 06:22:21]  storage_token=
[2026-03-07 06:22:21]  surl=/var/lib/boinc/var/slot56/slots/7/PanDA_Pilot-7042858056/log.48966988._001270.job.log.tgz.1
[2026-03-07 06:22:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/81/log.48966988._001270.job.log.tgz.1
[2026-03-07 06:22:21]  workdir=None
[2026-03-07 06:22:21] ]
[2026-03-07 06:22:21] 2026-03-07 05:21:18,853 | INFO     | transferring file log.48966988._001270.job.log.tgz.1 from /var/lib/boinc/var/slot56/slots/7/PanDA_Pilot-7042858056/log.48966988._001270.job.log.tgz.1 to /var/lib/b
[2026-03-07 06:22:21] 2026-03-07 05:21:18,853 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot56/slots/7/PanDA_Pilot-7042858056/log.48966988._001270.job.log.tgz.1 /var/lib/boinc/var/slot56/slots/7/lo
[2026-03-07 06:22:21] 2026-03-07 05:21:18,867 | INFO     | adding to output.list: log.48966988._001270.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/81/log.48966988._001270.job.log.tg
[2026-03-07 06:22:21] 2026-03-07 05:21:18,868 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 06:22:21] 2026-03-07 05:21:18,868 | INFO     | summary of transferred files:
[2026-03-07 06:22:21] 2026-03-07 05:21:18,868 | INFO     |  -- lfn=log.48966988._001270.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 06:22:21] 2026-03-07 05:21:18,868 | INFO     | stage-out finished correctly
[2026-03-07 06:22:21] 2026-03-07 05:21:19,507 | INFO     | time since job start (6014s) is within the limit (349056.0s)
[2026-03-07 06:22:21] 2026-03-07 05:21:19,707 | INFO     | monitor loop #436: job 0:7042858056 is in state 'finished'
[2026-03-07 06:22:21] 2026-03-07 05:21:19,707 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-07 06:22:21] 2026-03-07 05:21:21,513 | INFO     | time since job start (6016s) is within the limit (349056.0s)
[2026-03-07 06:22:21] 2026-03-07 05:21:21,988 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 06:22:21] 2026-03-07 05:21:22,209 | INFO     | monitor loop #437: job 0:7042858056 is in state 'finished'
[2026-03-07 06:22:21] 2026-03-07 05:21:22,210 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-07 06:22:21] 2026-03-07 05:21:22,283 | INFO     | job 7042858056 has state=finished
[2026-03-07 06:22:21] 2026-03-07 05:21:22,283 | INFO     | preparing for final server update for job 7042858056 in state='finished'
[2026-03-07 06:22:21] 2026-03-07 05:21:22,283 | INFO     | reading metadata from: /var/lib/boinc/var/slot56/slots/7/PanDA_Pilot-7042858056/jobReport.json
[2026-03-07 06:22:21] 2026-03-07 05:21:22,285 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot56/slots/7/workernode_map.json
[2026-03-07 06:22:21] 2026-03-07 05:21:22,285 | INFO     | this job has now completed (state=finished)
[2026-03-07 06:22:21] 2026-03-07 05:21:22,285 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 06:22:21] 2026-03-07 05:21:22,285 | INFO     | log transfer has been attempted: DONE
[2026-03-07 06:22:21] 2026-03-07 05:21:22,285 | INFO     | job 7042858056 has finished - writing final server update
[2026-03-07 06:22:21] 2026-03-07 05:21:22,285 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2211485/.job.ad'
[2026-03-07 06:22:21] 2026-03-07 05:21:22,285 | INFO     | total number of processed events: 400 (read)
[2026-03-07 06:22:21] 2026-03-07 05:21:22,303 | INFO     | using path: /var/lib/boinc/var/slot56/slots/7/PanDA_Pilot-7042858056/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 06:22:21] 2026-03-07 05:21:22,304 | INFO     | extracted standard info from prmon json
[2026-03-07 06:22:21] 2026-03-07 05:21:22,304 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 06:22:21] 2026-03-07 05:21:22,304 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 06:22:21] 2026-03-07 05:21:22,304 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 06:22:21] 2026-03-07 05:21:22,304 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 06:22:21] 2026-03-07 05:21:22,305 | INFO     | fitting pss+swap vs Time
[2026-03-07 06:22:21] 2026-03-07 05:21:22,306 | INFO     | sum of square deviations: 241429643.0
[2026-03-07 06:22:21] 2026-03-07 05:21:22,306 | INFO     | sum of deviations: 1072274043.0000001
[2026-03-07 06:22:21] 2026-03-07 05:21:22,306 | INFO     | mean x: 1772857965.5
[2026-03-07 06:22:21] 2026-03-07 05:21:22,306 | INFO     | mean y: 2320569.1739130435
[2026-03-07 06:22:21] 2026-03-07 05:21:22,306 | INFO     | intersect: -7871565813.25113
[2026-03-07 06:22:21] 2026-03-07 05:21:22,306 | INFO     | chi2: 0.0003245097289612327
[2026-03-07 06:22:21] 2026-03-07 05:21:22,306 | INFO     | current memory leak: 4.44 B/s (using 92 data points, chi2=0.00)
[2026-03-07 06:22:21] 2026-03-07 05:21:22,306 | INFO     | could have reported an average CPU frequency of 3599 MHz (7 samples)
[2026-03-07 06:22:21] 2026-03-07 05:21:22,306 | INFO     | ..............................
[2026-03-07 06:22:21] 2026-03-07 05:21:22,306 | INFO     | . Timing measurements:
[2026-03-07 06:22:21] 2026-03-07 05:21:22,307 | INFO     | . get job = 0 s
[2026-03-07 06:22:21] 2026-03-07 05:21:22,307 | INFO     | . initial setup = 4 s
[2026-03-07 06:22:21] 2026-03-07 05:21:22,307 | INFO     | . payload setup = 4 s
[2026-03-07 06:22:21] 2026-03-07 05:21:22,307 | INFO     | . stage-in = 0 s
[2026-03-07 06:22:21] 2026-03-07 05:21:22,307 | INFO     | . payload execution = 5994 s
[2026-03-07 06:22:21] 2026-03-07 05:21:22,307 | INFO     | . stage-out = 0 s
[2026-03-07 06:22:21] 2026-03-07 05:21:22,307 | INFO     | . log creation = 0 s
[2026-03-07 06:22:21] 2026-03-07 05:21:22,307 | INFO     | ..............................
[2026-03-07 06:22:21] 2026-03-07 05:21:22,727 | INFO     | 
[2026-03-07 06:22:21] 2026-03-07 05:21:22,728 | INFO     | job summary report
[2026-03-07 06:22:21] 2026-03-07 05:21:22,728 | INFO     | --------------------------------------------------
[2026-03-07 06:22:21] 2026-03-07 05:21:22,728 | INFO     | PanDA job id: 7042858056
[2026-03-07 06:22:21] 2026-03-07 05:21:22,728 | INFO     | task id: 48966988
[2026-03-07 06:22:21] 2026-03-07 05:21:22,728 | INFO     | errors: (none)
[2026-03-07 06:22:21] 2026-03-07 05:21:22,728 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 06:22:21] 2026-03-07 05:21:22,728 | INFO     | pilot state: finished 
[2026-03-07 06:22:21] 2026-03-07 05:21:22,728 | INFO     | transexitcode: 0
[2026-03-07 06:22:21] 2026-03-07 05:21:22,728 | INFO     | exeerrorcode: 0
[2026-03-07 06:22:21] 2026-03-07 05:21:22,728 | INFO     | exeerrordiag: 
[2026-03-07 06:22:21] 2026-03-07 05:21:22,728 | INFO     | exitcode: 0
[2026-03-07 06:22:21] 2026-03-07 05:21:22,728 | INFO     | exitmsg: OK
[2026-03-07 06:22:21] 2026-03-07 05:21:22,728 | INFO     | cpuconsumptiontime: 23072 s
[2026-03-07 06:22:21] 2026-03-07 05:21:22,728 | INFO     | nevents: 400
[2026-03-07 06:22:21] 2026-03-07 05:21:22,728 | INFO     | neventsw: 0
[2026-03-07 06:22:21] 2026-03-07 05:21:22,728 | INFO     | pid: 2365782
[2026-03-07 06:22:21] 2026-03-07 05:21:22,728 | INFO     | pgrp: 2365782
[2026-03-07 06:22:21] 2026-03-07 05:21:22,728 | INFO     | corecount: 4
[2026-03-07 06:22:21] 2026-03-07 05:21:22,728 | INFO     | event service: False
[2026-03-07 06:22:21] 2026-03-07 05:21:22,728 | INFO     | sizes: {0: 2295852, 11: 2295852, 6002: 2322666, 6003: 2331686, 6006: 2331936}
[2026-03-07 06:22:21] 2026-03-07 05:21:22,728 | INFO     | --------------------------------------------------
[2026-03-07 06:22:21] 2026-03-07 05:21:22,728 | INFO     | 
[2026-03-07 06:22:21] 2026-03-07 05:21:22,728 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot56/slots/7
[2026-03-07 06:22:21] 2026-03-07 05:21:22,747 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 06:22:21] 2026-03-07 05:21:22,747 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 06:22:21] 2026-03-07 05:21:22,747 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 06:22:21] 2026-03-07 05:21:22,747 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 06:22:21] 2026-03-07 05:21:22,747 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 06:22:21] 2026-03-07 05:21:22,747 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 06:22:21] 2026-03-07 05:21:22,747 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 06:22:21] 2026-03-07 05:21:22,747 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 06:22:21] 2026-03-07 05:21:22,747 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 06:22:21] 2026-03-07 05:21:22,747 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 06:22:21] 2026-03-07 05:21:22,747 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 06:22:21] 2026-03-07 05:21:22,747 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 06:22:21] 2026-03-07 05:21:22,747 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 06:22:21] 2026-03-07 05:21:22,747 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 06:22:21] 2026-03-07 05:21:22,747 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 06:22:21] 2026-03-07 05:21:22,747 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 06:22:21] 2026-03-07 05:21:22,747 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 06:22:21] 2026-03-07 05:21:22,747 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 06:22:21] 2026-03-07 05:21:22,747 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 06:22:21] 2026-03-07 05:21:22,747 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 06:22:21] 2026-03-07 05:21:22,748 | INFO     | job 7042858056 has completed (purged errors)
[2026-03-07 06:22:21] 2026-03-07 05:21:22,748 | INFO     | overall cleanup function is called
[2026-03-07 06:22:21] 2026-03-07 05:21:23,754 | INFO     | --- collectZombieJob: --- 10, [2365782]
[2026-03-07 06:22:21] 2026-03-07 05:21:23,755 | INFO     | zombie collector waiting for pid 2365782
[2026-03-07 06:22:21] 2026-03-07 05:21:23,755 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 06:22:21] 2026-03-07 05:21:23,755 | INFO     | collected zombie processes
[2026-03-07 06:22:21] 2026-03-07 05:21:23,755 | INFO     | will attempt to kill all subprocesses of pid=2365782
[2026-03-07 06:22:21] 2026-03-07 05:21:24,177 | INFO     | process IDs to be killed: [2365782] (in reverse order)
[2026-03-07 06:22:21] 2026-03-07 05:21:24,385 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 06:22:21] 2026-03-07 05:21:24,385 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 06:22:21] 2026-03-07 05:21:24,409 | INFO     | did not find any defunct processes belonging to 2365782
[2026-03-07 06:22:21] 2026-03-07 05:21:24,432 | INFO     | did not find any defunct processes belonging to 2365782
[2026-03-07 06:22:21] 2026-03-07 05:21:24,433 | INFO     | ready for new job
[2026-03-07 06:22:21] 2026-03-07 05:21:24,433 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 06:22:21] 2026-03-07 05:21:24,434 | INFO     | **************************************
[2026-03-07 06:22:21] 2026-03-07 05:21:24,434 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 06:22:21] 2026-03-07 05:21:24,434 | INFO     | **************************************
[2026-03-07 06:22:21] 2026-03-07 05:21:24,434 | INFO     | 
[2026-03-07 06:22:21] 2026-03-07 05:21:24,441 | INFO     | architecture information:
[2026-03-07 06:22:21] 2026-03-07 05:21:24,441 | INFO     | executing command: cat /etc/os-release
[2026-03-07 06:22:21] 2026-03-07 05:21:24,454 | INFO     | cat /etc/os-release:
[2026-03-07 06:22:21] NAME="CentOS Linux"
[2026-03-07 06:22:21] VERSION="7 (Core)"
[2026-03-07 06:22:21] ID="centos"
[2026-03-07 06:22:21] ID_LIKE="rhel fedora"
[2026-03-07 06:22:21] VERSION_ID="7"
[2026-03-07 06:22:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 06:22:21] ANSI_COLOR="0;31"
[2026-03-07 06:22:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 06:22:21] HOME_URL="https://www.centos.org/"
[2026-03-07 06:22:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 06:22:21] 
[2026-03-07 06:22:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 06:22:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 06:22:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 06:22:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 06:22:21] 
[2026-03-07 06:22:21] 2026-03-07 05:21:24,454 | INFO     | **************************************
[2026-03-07 06:22:21] 2026-03-07 05:21:24,957 | INFO     | executing command: df -mP /var/lib/boinc/var/slot56/slots/7
[2026-03-07 06:22:21] 2026-03-07 05:21:24,970 | INFO     | sufficient remaining disk space (20567818240 B)
[2026-03-07 06:22:21] 2026-03-07 05:21:24,970 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 06:22:21] 2026-03-07 05:21:24,970 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 06:22:21] 2026-03-07 05:21:24,971 | INFO     | update_server=False
[2026-03-07 06:22:21] 2026-03-07 05:21:24,971 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 06:22:21] 2026-03-07 05:21:24,971 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 06:22:21] 2026-03-07 05:21:24,989 | INFO     | all data control threads have been joined
[2026-03-07 06:22:21] 2026-03-07 05:21:25,092 | INFO     | all payload control threads have been joined
[2026-03-07 06:22:21] 2026-03-07 05:21:25,668 | INFO     | all job control threads have been joined
[2026-03-07 06:22:21] 2026-03-07 05:21:25,717 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 06:22:21] 2026-03-07 05:21:25,718 | INFO     | aborting loop
[2026-03-07 06:22:21] 2026-03-07 05:21:25,975 | INFO     | [job] retrieve thread has finished
[2026-03-07 06:22:21] 2026-03-07 05:21:25,994 | INFO     | [data] control thread has finished
[2026-03-07 06:22:21] 2026-03-07 05:21:26,028 | INFO     | [data] copytool_in thread has finished
[2026-03-07 06:22:21] 2026-03-07 05:21:26,097 | INFO     | [payload] control thread has finished
[2026-03-07 06:22:21] 2026-03-07 05:21:26,181 | INFO     | [payload] failed_post thread has finished
[2026-03-07 06:22:21] 2026-03-07 05:21:26,673 | INFO     | [job] control thread has finished
[2026-03-07 06:22:21] 2026-03-07 05:21:26,722 | INFO     | [job] job monitor thread has finished
[2026-03-07 06:22:21] 2026-03-07 05:21:26,778 | INFO     | [job] validate thread has finished
[2026-03-07 06:22:21] 2026-03-07 05:21:26,815 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 06:22:21] 2026-03-07 05:21:26,977 | INFO     | [data] copytool_out thread has finished
[2026-03-07 06:22:21] 2026-03-07 05:21:27,044 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 06:22:21] 2026-03-07 05:21:27,059 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 06:22:21] 2026-03-07 05:21:27,353 | INFO     | [payload] validate_post thread has finished
[2026-03-07 06:22:21] 2026-03-07 05:21:27,369 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 06:22:21] 2026-03-07 05:21:28,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 06:22:21] 2026-03-07 05:21:28,375 | INFO     | [job] queue monitor thread has finished
[2026-03-07 06:22:21] 2026-03-07 05:21:32,048 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 06:22:21] 2026-03-07 05:21:35,369 | INFO     | job.realtimelogging is not enabled
[2026-03-07 06:22:21] 2026-03-07 05:21:36,374 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 06:22:21] 2026-03-07 05:21:55,029 | INFO     | PID=2357584 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 06:22:21] 2026-03-07 05:21:55,029 | INFO     | .. there are 55 such processes running
[2026-03-07 06:22:21] 2026-03-07 05:21:55,029 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 06:22:21] 2026-03-07 05:21:55,030 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 06:22:21] 2026-03-07 05:21:55,030 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 06:22:21] 2026-03-07 05:22:14,745 | INFO     | [monitor] cgroup control has ended
[2026-03-07 06:22:21] 2026-03-07 05:22:16,171 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23121022957376)>', '<ExcThread(monitor, started 23120783353600)>']
[2026-03-07 06:22:21] 2026-03-07 05:22:17,139 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 06:22:21] 2026-03-07 05:22:17,140 | INFO     | [monitor] control thread has ended
[2026-03-07 06:22:21] 2026-03-07 05:22:21,196 | INFO     | all workflow threads have been joined
[2026-03-07 06:22:21] 2026-03-07 05:22:21,197 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 06:22:21] 2026-03-07 05:22:21,197 | INFO     | traces error code: 0
[2026-03-07 06:22:21] 2026-03-07 05:22:21,197 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 06:22:21] 2026-03-07 05:22:21,359 [wrapper] ==== pilot stdout END ====
[2026-03-07 06:22:21] 2026-03-07 05:22:21,362 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 06:22:21] 2026-03-07 05:22:21,364 [wrapper] pilotpid: 2357584
[2026-03-07 06:22:21] 2026-03-07 05:22:21,366 [wrapper] Pilot exit status: 0
[2026-03-07 06:22:21] 2026-03-07 05:22:21,377 [wrapper] pandaids: 7042858056
[2026-03-07 06:22:21] 2026-03-07 05:22:21,486 [wrapper] cleanup supervisor_pilot 3298038 2357585
[2026-03-07 06:22:21] 2026-03-07 05:22:21,489 [wrapper] Test setup, not cleaning
[2026-03-07 06:22:21] 2026-03-07 05:22:21,491 [wrapper] apfmon messages muted
[2026-03-07 06:22:21] 2026-03-07 05:22:21,493 [wrapper] ==== wrapper stdout END ====
[2026-03-07 06:22:21] 2026-03-07 05:22:21,495 [wrapper] ==== wrapper stderr END ====
[2026-03-07 06:22:21]  *** Error codes and diagnostics ***
[2026-03-07 06:22:21]     "exeErrorCode": 0,
[2026-03-07 06:22:21]     "exeErrorDiag": "",
[2026-03-07 06:22:21]     "pilotErrorCode": 0,
[2026-03-07 06:22:21]     "pilotErrorDiag": "",
[2026-03-07 06:22:21]  *** Listing of results directory ***
[2026-03-07 06:22:21] total 404804
[2026-03-07 06:22:21] -rw-r--r--. 1 boinc boinc    584627 Mar  6 04:41 pilot3.tar.gz
[2026-03-07 06:22:21] -rw-r--r--. 1 boinc boinc      5111 Mar  6 05:16 queuedata.json
[2026-03-07 06:22:21] -rwx------. 1 boinc boinc     36322 Mar  6 05:17 runpilot2-wrapper.sh
[2026-03-07 06:22:21] -rw-r--r--. 1 boinc boinc       100 Mar  7 04:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 06:22:21] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 04:40 run_atlas
[2026-03-07 06:22:21] -rw-r--r--. 1 boinc boinc       105 Mar  7 04:40 job.xml
[2026-03-07 06:22:21] -rw-r--r--. 2 boinc boinc 211457727 Mar  7 04:40 EVNT.48966985._000176.pool.root.1
[2026-03-07 06:22:21] -rw-r--r--. 2 boinc boinc     15845 Mar  7 04:40 start_atlas.sh
[2026-03-07 06:22:21] drwxrwx--x. 2 boinc boinc      4096 Mar  7 04:40 shared
[2026-03-07 06:22:21] -rw-r--r--. 2 boinc boinc    597960 Mar  7 04:40 input.tar.gz
[2026-03-07 06:22:21] -rw-r--r--. 1 boinc boinc         0 Mar  7 04:40 boinc_lockfile
[2026-03-07 06:22:21] -rw-r--r--. 1 boinc boinc      2590 Mar  7 04:40 pandaJob.out
[2026-03-07 06:22:21] -rw-------. 1 boinc boinc    999155 Mar  7 04:41 agis_schedconf.cvmfs.json
[2026-03-07 06:22:21] -rw-------. 1 boinc boinc   1521291 Mar  7 04:41 agis_ddmendpoints.agis.ALL.json
[2026-03-07 06:22:21] -rw-------. 1 boinc boinc       442 Mar  7 04:41 workernode_map.json
[2026-03-07 06:22:21] drwx------. 5 boinc boinc      4096 Mar  7 04:41 pilot3
[2026-03-07 06:22:21] -rw-r--r--. 1 boinc boinc      6705 Mar  7 04:41 init_data.xml
[2026-03-07 06:22:21] -rw-------. 1 boinc boinc 196781399 Mar  7 06:20 HITS.48966988._001270.pool.root.1
[2026-03-07 06:22:21] -rw-r--r--. 1 boinc boinc       529 Mar  7 06:20 boinc_task_state.xml
[2026-03-07 06:22:21] -rw-------. 1 boinc boinc        95 Mar  7 06:21 pilot_heartbeat.json
[2026-03-07 06:22:21] -rw-------. 1 boinc boinc      1043 Mar  7 06:21 memory_monitor_summary.json
[2026-03-07 06:22:21] -rw-------. 1 boinc boinc    295727 Mar  7 06:21 log.48966988._001270.job.log.tgz.1
[2026-03-07 06:22:21] -rw-------. 1 boinc boinc      6343 Mar  7 06:21 heartbeat.json
[2026-03-07 06:22:21] -rw-r--r--. 1 boinc boinc      8192 Mar  7 06:21 boinc_mmap_file
[2026-03-07 06:22:21] -rw-r--r--. 1 boinc boinc        27 Mar  7 06:21 wrapper_checkpoint.txt
[2026-03-07 06:22:21] -rw-------. 1 boinc boinc      4901 Mar  7 06:22 pilotlog.txt
[2026-03-07 06:22:21] -rw-------. 1 boinc boinc    872611 Mar  7 06:22 log.48966988._001270.job.log.1
[2026-03-07 06:22:21] -rw-------. 1 boinc boinc       357 Mar  7 06:22 output.list
[2026-03-07 06:22:21] -rw-r--r--. 1 boinc boinc       620 Mar  7 06:22 runtime_log
[2026-03-07 06:22:21] -rw-------. 1 boinc boinc   1187840 Mar  7 06:22 result.tar.gz
[2026-03-07 06:22:21] -rw-------. 1 boinc boinc       663 Mar  7 06:22 wleKDmonbI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmJ6NLDm5Syahm.diag
[2026-03-07 06:22:21] -rw-r--r--. 1 boinc boinc      9204 Mar  7 06:22 runtime_log.err
[2026-03-07 06:22:21] -rw-r--r--. 1 boinc boinc     21332 Mar  7 06:22 stderr.txt
[2026-03-07 06:22:21] HITS file was successfully produced:
[2026-03-07 06:22:21] -rw-------. 1 boinc boinc 196781399 Mar  7 06:20 shared/HITS.pool.root.1
[2026-03-07 06:22:21]  *** Contents of shared directory: ***
[2026-03-07 06:22:21] total 400444
[2026-03-07 06:22:21] -rw-r--r--. 2 boinc boinc 211457727 Mar  7 04:40 ATLAS.root_0
[2026-03-07 06:22:21] -rw-r--r--. 2 boinc boinc     15845 Mar  7 04:40 start_atlas.sh
[2026-03-07 06:22:21] -rw-r--r--. 2 boinc boinc    597960 Mar  7 04:40 input.tar.gz
[2026-03-07 06:22:21] -rw-------. 1 boinc boinc 196781399 Mar  7 06:20 HITS.pool.root.1
[2026-03-07 06:22:21] -rw-------. 1 boinc boinc   1187840 Mar  7 06:22 result.tar.gz
06:22:23 (2353005): run_atlas exited; CPU time 23302.007967
06:22:23 (2353005): called boinc_finish(0)

</stderr_txt>
]]>

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