Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-06 01:43:30 (3960): vboxwrapper version 26210
2026-03-06 01:43:30 (3960): BOINC client version: 8.2.4
2026-03-06 01:43:30 (3960): Detected: VirtualBox VboxManage Interface (Version: 7.2.0)
2026-03-06 01:43:30 (3960): Successfully copied 'init_data.xml' to the shared directory.
2026-03-06 01:43:31 (3960): Create VM. (boinc_aa65446619d796e7, slot#2)
2026-03-06 01:43:31 (3960): Setting Memory Size for VM. (4400MB)
2026-03-06 01:43:31 (3960): Setting CPU Count for VM. (4)
2026-03-06 01:43:32 (3960): Setting Chipset Options for VM.
2026-03-06 01:43:32 (3960): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-06 01:43:32 (3960): Setting Boot Options for VM.
2026-03-06 01:43:33 (3960): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-06 01:43:33 (3960): Enabling VM Network Access.
2026-03-06 01:43:33 (3960): Disabling USB Support for VM.
2026-03-06 01:43:33 (3960): Disabling COM Port Support for VM.
2026-03-06 01:43:34 (3960): Disabling LPT Port Support for VM.
2026-03-06 01:43:34 (3960): Disabling Audio Support for VM.
2026-03-06 01:43:34 (3960): Disabling Clipboard Support for VM.
2026-03-06 01:43:35 (3960): Disabling Drag and Drop Support for VM.
2026-03-06 01:43:35 (3960): Adding storage controller(s) to VM.
2026-03-06 01:43:35 (3960): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-06 01:43:36 (3960): Adding VirtualBox Guest Additions to VM.
2026-03-06 01:43:36 (3960): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-06 01:43:36 (3960): forwarding host port 53983 to guest port 80
2026-03-06 01:43:36 (3960): Enabling remote desktop for VM.
2026-03-06 01:43:37 (3960): Required extension pack not installed, remote desktop not enabled.
2026-03-06 01:43:37 (3960): Enabling shared directory for VM.
2026-03-06 01:43:37 (3960): Starting VM using VBoxManage interface. (boinc_aa65446619d796e7, slot#2)
2026-03-06 01:43:42 (3960): Successfully started VM. (PID = '4848')
2026-03-06 01:43:42 (3960): Reporting VM Process ID to BOINC.
2026-03-06 01:43:42 (3960): Guest Log: BIOS: VirtualBox 7.2.0
2026-03-06 01:43:42 (3960): Guest Log: CPUID EDX: 0x178bfbff
2026-03-06 01:43:42 (3960): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-06 01:43:42 (3960): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-06 01:43:42 (3960): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-06 01:43:42 (3960): Detected: Web Application Enabled (http://localhost:53983)
2026-03-06 01:43:42 (3960): Preference change detected
2026-03-06 01:43:42 (3960): Setting CPU throttle for VM. (60%)
2026-03-06 01:43:42 (3960): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-06 01:43:44 (3960): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-06 01:43:44 (3960): Guest Log: BIOS: Booting from Hard Disk...
2026-03-06 01:43:47 (3960): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-06 01:43:47 (3960): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-06 01:43:47 (3960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-06 01:43:59 (3960): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-06 01:43:59 (3960): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-06 01:44:16 (3960): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-06 01:44:16 (3960): Guest Log: 00:00:00.000205 main     Log opened 2026-03-06T01:44:14.966978000Z
2026-03-06 01:44:16 (3960): Guest Log: 00:00:00.000356 main     OS Product: Linux
2026-03-06 01:44:16 (3960): Guest Log: 00:00:00.000394 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-06 01:44:16 (3960): Guest Log: 00:00:00.000423 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-06 01:44:16 (3960): Guest Log: 00:00:00.000450 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-06 01:44:16 (3960): Guest Log: 00:00:00.000451 main     Process ID: 1305
2026-03-06 01:44:16 (3960): Guest Log: 00:00:00.000452 main     Package type: LINUX_64BITS_GENERIC
2026-03-06 01:44:16 (3960): Guest Log: 00:00:00.003349 main     5.2.32 r132073 started. Verbose level = 0
2026-03-06 01:44:17 (3960): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-06 01:44:17 (3960): Guest Log: [INFO] Mounting shared directory
2026-03-06 01:44:17 (3960): Guest Log: [INFO] Checking for init_data.xml
2026-03-06 01:44:25 (3960): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-06 01:44:25 (3960): Guest Log: [INFO] Detected branch: prod
2026-03-06 01:44:25 (3960): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-06 01:44:25 (3960): Guest Log: Copying input files
2026-03-06 01:44:27 (3960): Guest Log: 00:00:10.038025 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 496 703 000ns (GuestNow=1 772 779 466 474 231 000 ns GuestLast=1 772 761 454 977 528 000 ns fSetTimeLastLoop=true )
2026-03-06 01:44:27 (3960): Guest Log: Copied input files into RunAtlas.
2026-03-06 01:44:28 (3960): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-06 01:44:28 (3960): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-06 01:44:28 (3960): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-06 01:44:28 (3960): Guest Log: Further information can be found at the LHC@home message board.
2026-03-06 01:44:37 (3960): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-06 01:44:37 (3960): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-06 01:44:37 (3960): Guest Log: 2.6.3.0 1586 0 30128 156947 3 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-06 01:44:39 (3960): Guest Log: copied the webapp to /var/www
2026-03-06 01:44:40 (3960): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-06 01:44:40 (3960): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-06 01:44:40 (3960): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-06 01:44:40 (3960): Guest Log:  *** Starting ATLAS job. (PandaID=7042830961 taskID=48966988) ***
2026-03-06 03:25:08 (3960): Status Report: Elapsed Time: '6000.000000'
2026-03-06 03:25:08 (3960): Status Report: CPU Time: '9867.937500'
2026-03-06 05:07:15 (3960): Status Report: Elapsed Time: '12000.000000'
2026-03-06 05:07:15 (3960): Status Report: CPU Time: '22129.343750'
2026-03-06 06:49:22 (3960): Status Report: Elapsed Time: '18000.000000'
2026-03-06 06:49:22 (3960): Status Report: CPU Time: '34359.812500'
2026-03-06 07:47:36 (3960): Guest Log:  *** Job finished ***
2026-03-06 07:47:36 (3960): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-06 07:47:36 (3960): Guest Log: 2026-03-06 12:47:16,716 | INFO     | all workflow threads have been joined
2026-03-06 07:47:36 (3960): Guest Log: 2026-03-06 12:47:16,716 | INFO     | end of generic workflow (traces error code: 0)
2026-03-06 07:47:36 (3960): Guest Log: 2026-03-06 12:47:16,716 | INFO     | traces error code: 0
2026-03-06 07:47:36 (3960): Guest Log: 2026-03-06 12:47:16,717 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-06 07:47:36 (3960): Guest Log: 2026-03-06 12:47:32,239 | INFO     | PID=5989 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-06 07:47:36 (3960): Guest Log: 2026-03-06 12:47:32,240 | INFO     | found 0 job(s) in 20 queues
2026-03-06 07:47:36 (3960): Guest Log: 2026-03-06 12:47:32,240 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-06 07:47:36 (3960): Guest Log: 2026-03-06 12:47:32,240 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-06 07:47:36 (3960): Guest Log: 2026-03-06 12:47:32,240 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-06 07:47:36 (3960): Guest Log: 2026-03-06 12:47:32,240 | INFO     | [monitor] control thread has ended
2026-03-06 07:47:36 (3960): Guest Log: 2026-03-06 12:47:32,442 [wrapper] ==== pilot stdout END ====
2026-03-06 07:47:36 (3960): Guest Log: 2026-03-06 12:47:32,517 [wrapper] ==== wrapper stdout RESUME ====
2026-03-06 07:47:36 (3960): Guest Log: 2026-03-06 12:47:32,554 [wrapper] pilotpid: 5989
2026-03-06 07:47:36 (3960): Guest Log: 2026-03-06 12:47:32,587 [wrapper] Pilot exit status: 0
2026-03-06 07:47:36 (3960): Guest Log: 2026-03-06 12:47:35,168 [wrapper] pandaids: 7042830961
2026-03-06 07:47:36 (3960): Guest Log: 2026-03-06 12:47:35,235 [wrapper] cleanup supervisor_pilot 30578 5990
2026-03-06 07:47:36 (3960): Guest Log: 2026-03-06 12:47:35,258 [wrapper] Test setup, not cleaning
2026-03-06 07:47:36 (3960): Guest Log: 2026-03-06 12:47:35,294 [wrapper] apfmon messages muted
2026-03-06 07:47:36 (3960): Guest Log: 2026-03-06 12:47:35,300 [wrapper] ==== wrapper stdout END ====
2026-03-06 07:47:36 (3960): Guest Log: 2026-03-06 12:47:35,355 [wrapper] ==== wrapper stderr END ====
2026-03-06 07:47:36 (3960): Guest Log:  *** Error codes and diagnostics ***
2026-03-06 07:47:36 (3960): Guest Log:     "exeErrorCode": 0,
2026-03-06 07:47:36 (3960): Guest Log:     "exeErrorDiag": "",
2026-03-06 07:47:36 (3960): Guest Log:     "pilotErrorCode": 0,
2026-03-06 07:47:36 (3960): Guest Log:     "pilotErrorDiag": "",
2026-03-06 07:47:36 (3960): Guest Log:  *** Listing of results directory ***
2026-03-06 07:47:36 (3960): Guest Log: total 210840
2026-03-06 07:47:36 (3960): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  6 03:41 pilot3.tar.gz
2026-03-06 07:47:36 (3960): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  6 04:16 queuedata.json
2026-03-06 07:47:36 (3960): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  6 04:16 runpilot2-wrapper.sh
2026-03-06 07:47:36 (3960): Guest Log: -rwxr-xr-x. 1 atlas atlas     10504 Mar  6 06:44 init_data.xml
2026-03-06 07:47:36 (3960): Guest Log: -rwxr-xr-x. 1 atlas atlas    597959 Mar  6 06:44 input.tar.gz
2026-03-06 07:47:36 (3960): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  6 06:44 start_atlas.sh
2026-03-06 07:47:36 (3960): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  6 06:44 EVNT.48966985._000158.pool.root.1 -> /data/./ATLAS.root_0
2026-03-06 07:47:36 (3960): Guest Log: -rw-r--r--. 1 atlas atlas      2588 Mar  6 06:44 pandaJob.out
2026-03-06 07:47:36 (3960): Guest Log: -rw-------. 1 atlas atlas    998544 Mar  6 06:46 agis_schedconf.cvmfs.json
2026-03-06 07:47:36 (3960): Guest Log: -rw-------. 1 atlas atlas       422 Mar  6 06:46 workernode_map.json
2026-03-06 07:47:36 (3960): Guest Log: drwx------. 5 atlas atlas      4096 Mar  6 06:46 pilot3
2026-03-06 07:47:36 (3960): Guest Log: -rw-------. 1 atlas atlas 205212278 Mar  6 12:45 HITS.48966988._000813.pool.root.1
2026-03-06 07:47:36 (3960): Guest Log: -rw-------. 1 atlas atlas      1026 Mar  6 12:46 memory_monitor_summary.json
2026-03-06 07:47:36 (3960): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  6 12:46 agis_ddmendpoints.agis.ALL.json
2026-03-06 07:47:36 (3960): Guest Log: -rw-------. 1 atlas atlas    498020 Mar  6 12:46 log.48966988._000813.job.log.tgz.1
2026-03-06 07:47:36 (3960): Guest Log: -rw-------. 1 atlas atlas      6355 Mar  6 12:47 heartbeat.json
2026-03-06 07:47:36 (3960): Guest Log: -rw-------. 1 atlas atlas       744 Mar  6 12:47 pilotlog.txt
2026-03-06 07:47:36 (3960): Guest Log: -rw-------. 1 atlas atlas        95 Mar  6 12:47 pilot_heartbeat.json
2026-03-06 07:47:36 (3960): Guest Log: -rw-------. 1 atlas atlas   2916166 Mar  6 12:47 log.48966988._000813.job.log.1
2026-03-06 07:47:36 (3960): Guest Log: -rw-------. 1 atlas atlas       357 Mar  6 12:47 output.list
2026-03-06 07:47:36 (3960): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  6 12:47 runtime_log
2026-03-06 07:47:36 (3960): Guest Log: -rw-------. 1 atlas atlas   3430400 Mar  6 12:47 result.tar.gz
2026-03-06 07:47:36 (3960): Guest Log: -rw-r--r--. 1 atlas atlas      8713 Mar  6 12:47 runtime_log.err
2026-03-06 07:47:36 (3960): Guest Log: -rw-------. 1 atlas atlas       646 Mar  6 12:47 8HxLDmOnbI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmx9PLDmiFDNom.diag
2026-03-06 07:47:37 (3960): Guest Log: Looking for outputfile HITS.48966988._000813.pool.root.1
2026-03-06 07:47:37 (3960): Guest Log: HITS file was successfully produced
2026-03-06 07:47:37 (3960): Guest Log: -rw-------. 1 atlas atlas 205212278 Mar  6 12:45 /home/atlas/RunAtlas/HITS.48966988._000813.pool.root.1
2026-03-06 07:47:38 (3960): Guest Log: Successfully finished the ATLAS job!
2026-03-06 07:47:38 (3960): Guest Log: Copying the results back to the shared directory!
2026-03-06 07:47:39 (3960): Guest Log:  *** Contents of shared directory: ***
2026-03-06 07:47:39 (3960): Guest Log: total 411944
2026-03-06 07:47:39 (3960): Guest Log: -rwxrwxrwx. 1 root root 212555603 Mar  6 06:43 ATLAS.root_0
2026-03-06 07:47:39 (3960): Guest Log: -rwxrwxrwx. 1 root root 205212278 Mar  6 12:47 HITS.pool.root.1
2026-03-06 07:47:39 (3960): Guest Log: -rwxrwxrwx. 1 root root     10504 Mar  6 06:43 init_data.xml
2026-03-06 07:47:39 (3960): Guest Log: -rwxrwxrwx. 1 root root    597959 Mar  6 06:43 input.tar.gz
2026-03-06 07:47:39 (3960): Guest Log: -rwxrwxrwx. 1 root root   3430400 Mar  6 12:47 result.tar.gz
2026-03-06 07:47:39 (3960): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  6 06:43 start_atlas.sh
2026-03-06 07:47:39 (3960): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-06 07:47:39 (3960): VM Completion File Detected.
2026-03-06 07:47:39 (3960): Powering off VM.
2026-03-06 07:47:40 (3960): Successfully stopped VM.
2026-03-06 07:47:40 (3960): Deregistering VM. (boinc_aa65446619d796e7, slot#2)
2026-03-06 07:47:40 (3960): Removing network bandwidth throttle group from VM.
2026-03-06 07:47:41 (3960): Removing VM from VirtualBox.
2026-03-06 07:47:46 (3960): called boinc_finish(0)

</stderr_txt>
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