Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:00:54 (985682): wrapper (7.7.26015): starting
01:00:54 (985682): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 01:00:54] Arguments: --nthreads 4
[2026-03-07 01:00:54] Threads: 4
[2026-03-07 01:00:54] Checking for CVMFS
[2026-03-07 01:00:54] No cvmfs_config command found, will try listing directly
[2026-03-07 01:00:54] CVMFS is ok
[2026-03-07 01:00:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 01:00:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 01:00:54] Further information can be found at the LHC@home message board.
[2026-03-07 01:00:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 01:00:54] Checking for apptainer binary...
[2026-03-07 01:00:54] which: no apptainer in ((null))
[2026-03-07 01:00:54] apptainer is not installed, using version from CVMFS
[2026-03-07 01:00:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 01:00:55] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot132/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-07 01:00:55] apptainer works
[2026-03-07 01:00:55] Set ATHENA_PROC_NUMBER=4
[2026-03-07 01:00:55] Set ATHENA_CORE_NUMBER=4
[2026-03-07 01:00:55] Starting ATLAS job with PandaID=7042538632
[2026-03-07 01:00:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot132/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 02:40:24]  *** The last 200 lines of the pilot log: ***
[2026-03-07 02:40:24]  filetype=log
[2026-03-07 02:40:24]  guid=0c54cda7-22d2-4f4c-b0a4-0f497841d431
[2026-03-07 02:40:24]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-07 02:40:24]  is_altstaged=None
[2026-03-07 02:40:24]  is_tar=False
[2026-03-07 02:40:24]  lfn=log.48966988._000172.job.log.tgz.1
[2026-03-07 02:40:24]  mtime=0
[2026-03-07 02:40:24]  protocol_id=None
[2026-03-07 02:40:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 02:40:24]  replicas=None
[2026-03-07 02:40:24]  scope=mc23_13p6TeV
[2026-03-07 02:40:24]  status=None
[2026-03-07 02:40:24]  status_code=0
[2026-03-07 02:40:24]  storage_token=
[2026-03-07 02:40:24]  surl=/var/lib/boinc/var/slot132/slots/0/PanDA_Pilot-7042538632/log.48966988._000172.job.log.tgz.1
[2026-03-07 02:40:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/ee/log.48966988._000172.job.log.tgz.1
[2026-03-07 02:40:24]  workdir=None
[2026-03-07 02:40:24] ]
[2026-03-07 02:40:24] 2026-03-07 01:39:19,857 | INFO     | transferring file log.48966988._000172.job.log.tgz.1 from /var/lib/boinc/var/slot132/slots/0/PanDA_Pilot-7042538632/log.48966988._000172.job.log.tgz.1 to /var/lib/
[2026-03-07 02:40:24] 2026-03-07 01:39:19,857 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot132/slots/0/PanDA_Pilot-7042538632/log.48966988._000172.job.log.tgz.1 /var/lib/boinc/var/slot132/slots/0/
[2026-03-07 02:40:24] 2026-03-07 01:39:19,874 | INFO     | adding to output.list: log.48966988._000172.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/ee/log.48966988._000172.job.log.tg
[2026-03-07 02:40:24] 2026-03-07 01:39:19,875 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 02:40:24] 2026-03-07 01:39:19,875 | INFO     | summary of transferred files:
[2026-03-07 02:40:24] 2026-03-07 01:39:19,875 | INFO     |  -- lfn=log.48966988._000172.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 02:40:24] 2026-03-07 01:39:19,875 | INFO     | stage-out finished correctly
[2026-03-07 02:40:24] 2026-03-07 01:39:19,929 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 02:40:24] 2026-03-07 01:39:21,670 | INFO     | time since job start (5894s) is within the limit (349056.0s)
[2026-03-07 02:40:24] 2026-03-07 01:39:22,035 | INFO     | monitor loop #426: job 0:7042538632 is in state 'finished'
[2026-03-07 02:40:24] 2026-03-07 01:39:22,035 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-07 02:40:24] 2026-03-07 01:39:22,190 | INFO     | job 7042538632 has state=finished
[2026-03-07 02:40:24] 2026-03-07 01:39:22,190 | INFO     | preparing for final server update for job 7042538632 in state='finished'
[2026-03-07 02:40:24] 2026-03-07 01:39:22,190 | INFO     | reading metadata from: /var/lib/boinc/var/slot132/slots/0/PanDA_Pilot-7042538632/jobReport.json
[2026-03-07 02:40:24] 2026-03-07 01:39:22,193 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot132/slots/0/workernode_map.json
[2026-03-07 02:40:24] 2026-03-07 01:39:22,197 | INFO     | this job has now completed (state=finished)
[2026-03-07 02:40:24] 2026-03-07 01:39:22,197 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 02:40:24] 2026-03-07 01:39:22,197 | INFO     | log transfer has been attempted: DONE
[2026-03-07 02:40:24] 2026-03-07 01:39:22,197 | INFO     | job 7042538632 has finished - writing final server update
[2026-03-07 02:40:24] 2026-03-07 01:39:22,198 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_546658/.job.ad'
[2026-03-07 02:40:24] 2026-03-07 01:39:22,198 | INFO     | total number of processed events: 400 (read)
[2026-03-07 02:40:24] 2026-03-07 01:39:22,216 | INFO     | using path: /var/lib/boinc/var/slot132/slots/0/PanDA_Pilot-7042538632/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 02:40:24] 2026-03-07 01:39:22,217 | INFO     | extracted standard info from prmon json
[2026-03-07 02:40:24] 2026-03-07 01:39:22,217 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 02:40:24] 2026-03-07 01:39:22,217 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 02:40:24] 2026-03-07 01:39:22,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 02:40:24] 2026-03-07 01:39:22,217 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 02:40:24] 2026-03-07 01:39:22,219 | INFO     | fitting pss+swap vs Time
[2026-03-07 02:40:24] 2026-03-07 01:39:22,219 | INFO     | sum of square deviations: 226022842.5
[2026-03-07 02:40:24] 2026-03-07 01:39:22,219 | INFO     | sum of deviations: 1061596877.5
[2026-03-07 02:40:24] 2026-03-07 01:39:22,219 | INFO     | mean x: 1772844707.5
[2026-03-07 02:40:24] 2026-03-07 01:39:22,219 | INFO     | mean y: 2322608.611111111
[2026-03-07 02:40:24] 2026-03-07 01:39:22,219 | INFO     | intersect: -8324474740.530274
[2026-03-07 02:40:24] 2026-03-07 01:39:22,219 | INFO     | chi2: 0.0002851980483687686
[2026-03-07 02:40:24] 2026-03-07 01:39:22,219 | INFO     | current memory leak: 4.70 B/s (using 90 data points, chi2=0.00)
[2026-03-07 02:40:24] 2026-03-07 01:39:22,220 | INFO     | could have reported an average CPU frequency of 3563 MHz (7 samples)
[2026-03-07 02:40:24] 2026-03-07 01:39:22,220 | INFO     | ..............................
[2026-03-07 02:40:24] 2026-03-07 01:39:22,220 | INFO     | . Timing measurements:
[2026-03-07 02:40:24] 2026-03-07 01:39:22,220 | INFO     | . get job = 0 s
[2026-03-07 02:40:24] 2026-03-07 01:39:22,220 | INFO     | . initial setup = 5 s
[2026-03-07 02:40:24] 2026-03-07 01:39:22,220 | INFO     | . payload setup = 5 s
[2026-03-07 02:40:24] 2026-03-07 01:39:22,220 | INFO     | . stage-in = 0 s
[2026-03-07 02:40:24] 2026-03-07 01:39:22,220 | INFO     | . payload execution = 5871 s
[2026-03-07 02:40:24] 2026-03-07 01:39:22,220 | INFO     | . stage-out = 0 s
[2026-03-07 02:40:24] 2026-03-07 01:39:22,220 | INFO     | . log creation = 0 s
[2026-03-07 02:40:24] 2026-03-07 01:39:22,220 | INFO     | ..............................
[2026-03-07 02:40:24] 2026-03-07 01:39:22,271 | INFO     | 
[2026-03-07 02:40:24] 2026-03-07 01:39:22,271 | INFO     | job summary report
[2026-03-07 02:40:24] 2026-03-07 01:39:22,271 | INFO     | --------------------------------------------------
[2026-03-07 02:40:24] 2026-03-07 01:39:22,271 | INFO     | PanDA job id: 7042538632
[2026-03-07 02:40:24] 2026-03-07 01:39:22,271 | INFO     | task id: 48966988
[2026-03-07 02:40:24] 2026-03-07 01:39:22,271 | INFO     | errors: (none)
[2026-03-07 02:40:24] 2026-03-07 01:39:22,271 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 02:40:24] 2026-03-07 01:39:22,271 | INFO     | pilot state: finished 
[2026-03-07 02:40:24] 2026-03-07 01:39:22,271 | INFO     | transexitcode: 0
[2026-03-07 02:40:24] 2026-03-07 01:39:22,271 | INFO     | exeerrorcode: 0
[2026-03-07 02:40:24] 2026-03-07 01:39:22,271 | INFO     | exeerrordiag: 
[2026-03-07 02:40:24] 2026-03-07 01:39:22,271 | INFO     | exitcode: 0
[2026-03-07 02:40:24] 2026-03-07 01:39:22,271 | INFO     | exitmsg: OK
[2026-03-07 02:40:24] 2026-03-07 01:39:22,271 | INFO     | cpuconsumptiontime: 22582 s
[2026-03-07 02:40:24] 2026-03-07 01:39:22,271 | INFO     | nevents: 400
[2026-03-07 02:40:24] 2026-03-07 01:39:22,271 | INFO     | neventsw: 0
[2026-03-07 02:40:24] 2026-03-07 01:39:22,271 | INFO     | pid: 996354
[2026-03-07 02:40:24] 2026-03-07 01:39:22,271 | INFO     | pgrp: 996354
[2026-03-07 02:40:24] 2026-03-07 01:39:22,271 | INFO     | corecount: 4
[2026-03-07 02:40:24] 2026-03-07 01:39:22,271 | INFO     | event service: False
[2026-03-07 02:40:24] 2026-03-07 01:39:22,271 | INFO     | sizes: {0: 2295847, 10: 2295847, 5880: 2322602, 5882: 2331680, 5884: 2331818}
[2026-03-07 02:40:24] 2026-03-07 01:39:22,271 | INFO     | --------------------------------------------------
[2026-03-07 02:40:24] 2026-03-07 01:39:22,272 | INFO     | 
[2026-03-07 02:40:24] 2026-03-07 01:39:22,272 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot132/slots/0
[2026-03-07 02:40:24] 2026-03-07 01:39:22,292 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 02:40:24] 2026-03-07 01:39:22,292 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 02:40:24] 2026-03-07 01:39:22,292 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 02:40:24] 2026-03-07 01:39:22,292 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 02:40:24] 2026-03-07 01:39:22,292 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 02:40:24] 2026-03-07 01:39:22,292 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 02:40:24] 2026-03-07 01:39:22,292 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 02:40:24] 2026-03-07 01:39:22,292 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 02:40:24] 2026-03-07 01:39:22,292 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 02:40:24] 2026-03-07 01:39:22,292 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 02:40:24] 2026-03-07 01:39:22,292 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 02:40:24] 2026-03-07 01:39:22,292 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 02:40:24] 2026-03-07 01:39:22,292 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 02:40:24] 2026-03-07 01:39:22,293 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 02:40:24] 2026-03-07 01:39:22,293 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 02:40:24] 2026-03-07 01:39:22,293 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 02:40:24] 2026-03-07 01:39:22,293 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 02:40:24] 2026-03-07 01:39:22,293 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 02:40:24] 2026-03-07 01:39:22,293 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 02:40:24] 2026-03-07 01:39:22,293 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 02:40:24] 2026-03-07 01:39:22,293 | INFO     | job 7042538632 has completed (purged errors)
[2026-03-07 02:40:24] 2026-03-07 01:39:22,293 | INFO     | overall cleanup function is called
[2026-03-07 02:40:24] 2026-03-07 01:39:23,299 | INFO     | --- collectZombieJob: --- 10, [996354]
[2026-03-07 02:40:24] 2026-03-07 01:39:23,299 | INFO     | zombie collector waiting for pid 996354
[2026-03-07 02:40:24] 2026-03-07 01:39:23,299 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 02:40:24] 2026-03-07 01:39:23,299 | INFO     | collected zombie processes
[2026-03-07 02:40:24] 2026-03-07 01:39:23,299 | INFO     | will attempt to kill all subprocesses of pid=996354
[2026-03-07 02:40:24] 2026-03-07 01:39:23,753 | INFO     | process IDs to be killed: [996354] (in reverse order)
[2026-03-07 02:40:24] 2026-03-07 01:39:23,973 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 02:40:24] 2026-03-07 01:39:23,973 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 02:40:24] 2026-03-07 01:39:24,003 | INFO     | did not find any defunct processes belonging to 996354
[2026-03-07 02:40:24] 2026-03-07 01:39:24,033 | INFO     | did not find any defunct processes belonging to 996354
[2026-03-07 02:40:24] 2026-03-07 01:39:24,033 | INFO     | ready for new job
[2026-03-07 02:40:24] 2026-03-07 01:39:24,034 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 02:40:24] 2026-03-07 01:39:24,035 | INFO     | **************************************
[2026-03-07 02:40:24] 2026-03-07 01:39:24,035 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 02:40:24] 2026-03-07 01:39:24,035 | INFO     | **************************************
[2026-03-07 02:40:24] 2026-03-07 01:39:24,035 | INFO     | 
[2026-03-07 02:40:24] 2026-03-07 01:39:24,044 | INFO     | architecture information:
[2026-03-07 02:40:24] 2026-03-07 01:39:24,044 | INFO     | executing command: cat /etc/os-release
[2026-03-07 02:40:24] 2026-03-07 01:39:24,059 | INFO     | cat /etc/os-release:
[2026-03-07 02:40:24] NAME="CentOS Linux"
[2026-03-07 02:40:24] VERSION="7 (Core)"
[2026-03-07 02:40:24] ID="centos"
[2026-03-07 02:40:24] ID_LIKE="rhel fedora"
[2026-03-07 02:40:24] VERSION_ID="7"
[2026-03-07 02:40:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 02:40:24] ANSI_COLOR="0;31"
[2026-03-07 02:40:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 02:40:24] HOME_URL="https://www.centos.org/"
[2026-03-07 02:40:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 02:40:24] 
[2026-03-07 02:40:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 02:40:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 02:40:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 02:40:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 02:40:24] 
[2026-03-07 02:40:24] 2026-03-07 01:39:24,059 | INFO     | **************************************
[2026-03-07 02:40:24] 2026-03-07 01:39:24,562 | INFO     | executing command: df -mP /var/lib/boinc/var/slot132/slots/0
[2026-03-07 02:40:24] 2026-03-07 01:39:24,576 | INFO     | sufficient remaining disk space (22218276864 B)
[2026-03-07 02:40:24] 2026-03-07 01:39:24,576 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 02:40:24] 2026-03-07 01:39:24,576 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 02:40:24] 2026-03-07 01:39:24,576 | INFO     | update_server=False
[2026-03-07 02:40:24] 2026-03-07 01:39:24,576 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 02:40:24] 2026-03-07 01:39:25,086 | INFO     | all data control threads have been joined
[2026-03-07 02:40:24] 2026-03-07 01:39:25,270 | INFO     | all payload control threads have been joined
[2026-03-07 02:40:24] 2026-03-07 01:39:25,438 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 02:40:24] 2026-03-07 01:39:25,538 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 02:40:24] 2026-03-07 01:39:25,538 | INFO     | aborting loop
[2026-03-07 02:40:24] 2026-03-07 01:39:25,581 | INFO     | [job] retrieve thread has finished
[2026-03-07 02:40:24] 2026-03-07 01:39:25,835 | INFO     | all job control threads have been joined
[2026-03-07 02:40:24] 2026-03-07 01:39:25,984 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 02:40:24] 2026-03-07 01:39:26,091 | INFO     | [data] control thread has finished
[2026-03-07 02:40:24] 2026-03-07 01:39:26,159 | INFO     | [payload] validate_post thread has finished
[2026-03-07 02:40:24] 2026-03-07 01:39:26,214 | INFO     | [job] validate thread has finished
[2026-03-07 02:40:24] 2026-03-07 01:39:26,275 | INFO     | [payload] control thread has finished
[2026-03-07 02:40:24] 2026-03-07 01:39:26,372 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 02:40:24] 2026-03-07 01:39:26,543 | INFO     | [job] job monitor thread has finished
[2026-03-07 02:40:24] 2026-03-07 01:39:26,624 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 02:40:24] 2026-03-07 01:39:26,701 | INFO     | [data] copytool_in thread has finished
[2026-03-07 02:40:24] 2026-03-07 01:39:26,840 | INFO     | [job] control thread has finished
[2026-03-07 02:40:24] 2026-03-07 01:39:26,856 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 02:40:24] 2026-03-07 01:39:27,084 | INFO     | [payload] failed_post thread has finished
[2026-03-07 02:40:24] 2026-03-07 01:39:27,280 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 02:40:24] 2026-03-07 01:39:27,444 | INFO     | [data] copytool_out thread has finished
[2026-03-07 02:40:24] 2026-03-07 01:39:28,285 | INFO     | [job] queue monitor thread has finished
[2026-03-07 02:40:24] 2026-03-07 01:39:29,991 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 02:40:24] 2026-03-07 01:39:35,447 | INFO     | job.realtimelogging is not enabled
[2026-03-07 02:40:24] 2026-03-07 01:39:36,452 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 02:40:24] 2026-03-07 01:39:55,365 | INFO     | PID=990405 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-07 02:40:24] 2026-03-07 01:39:55,365 | INFO     | .. there are 47 such processes running
[2026-03-07 02:40:24] 2026-03-07 01:39:55,365 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 02:40:24] 2026-03-07 01:39:55,365 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 02:40:24] 2026-03-07 01:39:55,365 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 02:40:24] 2026-03-07 01:40:17,203 | INFO     | [monitor] cgroup control has ended
[2026-03-07 02:40:24] 2026-03-07 01:40:18,727 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23077218666304)>', '<ExcThread(monitor, started 23076980143872)>']
[2026-03-07 02:40:24] 2026-03-07 01:40:19,469 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 02:40:24] 2026-03-07 01:40:19,469 | INFO     | [monitor] control thread has ended
[2026-03-07 02:40:24] 2026-03-07 01:40:23,752 | INFO     | all workflow threads have been joined
[2026-03-07 02:40:24] 2026-03-07 01:40:23,752 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 02:40:24] 2026-03-07 01:40:23,752 | INFO     | traces error code: 0
[2026-03-07 02:40:24] 2026-03-07 01:40:23,752 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 02:40:24] 2026-03-07 01:40:23,889 [wrapper] ==== pilot stdout END ====
[2026-03-07 02:40:24] 2026-03-07 01:40:23,892 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 02:40:24] 2026-03-07 01:40:23,893 [wrapper] pilotpid: 990405
[2026-03-07 02:40:24] 2026-03-07 01:40:23,895 [wrapper] Pilot exit status: 0
[2026-03-07 02:40:24] 2026-03-07 01:40:23,905 [wrapper] pandaids: 7042538632
[2026-03-07 02:40:24] 2026-03-07 01:40:24,041 [wrapper] cleanup supervisor_pilot 1851503 990406
[2026-03-07 02:40:24] 2026-03-07 01:40:24,044 [wrapper] Test setup, not cleaning
[2026-03-07 02:40:24] 2026-03-07 01:40:24,047 [wrapper] apfmon messages muted
[2026-03-07 02:40:24] 2026-03-07 01:40:24,049 [wrapper] ==== wrapper stdout END ====
[2026-03-07 02:40:24] 2026-03-07 01:40:24,052 [wrapper] ==== wrapper stderr END ====
[2026-03-07 02:40:24]  *** Error codes and diagnostics ***
[2026-03-07 02:40:24]     "exeErrorCode": 0,
[2026-03-07 02:40:24]     "exeErrorDiag": "",
[2026-03-07 02:40:24]     "pilotErrorCode": 0,
[2026-03-07 02:40:24]     "pilotErrorDiag": "",
[2026-03-07 02:40:24]  *** Listing of results directory ***
[2026-03-07 02:40:24] total 406412
[2026-03-07 02:40:24] -rw-r--r--. 1 boinc boinc    584627 Mar  5 23:42 pilot3.tar.gz
[2026-03-07 02:40:24] -rwx------. 1 boinc boinc     36322 Mar  6 00:19 runpilot2-wrapper.sh
[2026-03-07 02:40:24] -rw-r--r--. 1 boinc boinc      5111 Mar  6 00:20 queuedata.json
[2026-03-07 02:40:24] -rw-r--r--. 1 boinc boinc       100 Mar  7 01:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 02:40:24] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 01:00 run_atlas
[2026-03-07 02:40:24] -rw-r--r--. 1 boinc boinc       105 Mar  7 01:00 job.xml
[2026-03-07 02:40:24] -rw-r--r--. 2 boinc boinc 213146683 Mar  7 01:00 EVNT.48966985._000007.pool.root.1
[2026-03-07 02:40:24] -rw-r--r--. 2 boinc boinc    597953 Mar  7 01:00 input.tar.gz
[2026-03-07 02:40:24] -rw-r--r--. 1 boinc boinc      6708 Mar  7 01:00 init_data.xml
[2026-03-07 02:40:24] -rw-r--r--. 2 boinc boinc     15845 Mar  7 01:00 start_atlas.sh
[2026-03-07 02:40:24] drwxrwx--x. 2 boinc boinc      4096 Mar  7 01:00 shared
[2026-03-07 02:40:24] -rw-r--r--. 1 boinc boinc         0 Mar  7 01:00 boinc_lockfile
[2026-03-07 02:40:24] -rw-r--r--. 1 boinc boinc      2587 Mar  7 01:00 pandaJob.out
[2026-03-07 02:40:24] -rw-------. 1 boinc boinc    999504 Mar  7 01:01 agis_schedconf.cvmfs.json
[2026-03-07 02:40:24] -rw-------. 1 boinc boinc   1521291 Mar  7 01:01 agis_ddmendpoints.agis.ALL.json
[2026-03-07 02:40:24] -rw-------. 1 boinc boinc       445 Mar  7 01:01 workernode_map.json
[2026-03-07 02:40:24] drwx------. 5 boinc boinc      4096 Mar  7 01:01 pilot3
[2026-03-07 02:40:24] -rw-------. 1 boinc boinc 196791074 Mar  7 02:38 HITS.48966988._000172.pool.root.1
[2026-03-07 02:40:24] -rw-------. 1 boinc boinc        95 Mar  7 02:38 pilot_heartbeat.json
[2026-03-07 02:40:24] -rw-r--r--. 1 boinc boinc       529 Mar  7 02:38 boinc_task_state.xml
[2026-03-07 02:40:24] -rw-------. 1 boinc boinc      1032 Mar  7 02:39 memory_monitor_summary.json
[2026-03-07 02:40:24] -rw-------. 1 boinc boinc    297139 Mar  7 02:39 log.48966988._000172.job.log.tgz.1
[2026-03-07 02:40:24] -rw-------. 1 boinc boinc      6352 Mar  7 02:39 heartbeat.json
[2026-03-07 02:40:24] -rw-r--r--. 1 boinc boinc        27 Mar  7 02:39 wrapper_checkpoint.txt
[2026-03-07 02:40:24] -rw-r--r--. 1 boinc boinc      8192 Mar  7 02:39 boinc_mmap_file
[2026-03-07 02:40:24] -rw-------. 1 boinc boinc      4901 Mar  7 02:40 pilotlog.txt
[2026-03-07 02:40:24] -rw-------. 1 boinc boinc    851386 Mar  7 02:40 log.48966988._000172.job.log.1
[2026-03-07 02:40:24] -rw-------. 1 boinc boinc       357 Mar  7 02:40 output.list
[2026-03-07 02:40:24] -rw-r--r--. 1 boinc boinc       620 Mar  7 02:40 runtime_log
[2026-03-07 02:40:24] -rw-------. 1 boinc boinc   1167360 Mar  7 02:40 result.tar.gz
[2026-03-07 02:40:24] -rw-r--r--. 1 boinc boinc      9221 Mar  7 02:40 runtime_log.err
[2026-03-07 02:40:24] -rw-------. 1 boinc boinc       662 Mar  7 02:40 JcuMDmy9WI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmiSPLDmZd7N8n.diag
[2026-03-07 02:40:24] -rw-r--r--. 1 boinc boinc     14447 Mar  7 02:40 stderr.txt
[2026-03-07 02:40:24] HITS file was successfully produced:
[2026-03-07 02:40:24] -rw-------. 1 boinc boinc 196791074 Mar  7 02:38 shared/HITS.pool.root.1
[2026-03-07 02:40:24]  *** Contents of shared directory: ***
[2026-03-07 02:40:24] total 402080
[2026-03-07 02:40:24] -rw-r--r--. 2 boinc boinc 213146683 Mar  7 01:00 ATLAS.root_0
[2026-03-07 02:40:24] -rw-r--r--. 2 boinc boinc    597953 Mar  7 01:00 input.tar.gz
[2026-03-07 02:40:24] -rw-r--r--. 2 boinc boinc     15845 Mar  7 01:00 start_atlas.sh
[2026-03-07 02:40:24] -rw-------. 1 boinc boinc 196791074 Mar  7 02:38 HITS.pool.root.1
[2026-03-07 02:40:24] -rw-------. 1 boinc boinc   1167360 Mar  7 02:40 result.tar.gz
02:40:26 (985682): run_atlas exited; CPU time 22846.759761
02:40:26 (985682): called boinc_finish(0)

</stderr_txt>
]]>

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