Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:49:24 (897): wrapper (7.7.26015): starting
11:49:24 (897): wrapper: running run_atlas (--nthreads 8)
[2026-03-06 11:49:24] Arguments: --nthreads 8
[2026-03-06 11:49:24] Threads: 8
[2026-03-06 11:49:24] Checking for CVMFS
[2026-03-06 11:49:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 11:49:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 11:49:26] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 11:49:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 11:49:28] 2.11.2.0 18344 115939 103488 156953 1 118 20618402 25165825 1088 130560 156 32184848 99.803 31706489 1100 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-06 11:49:28] CVMFS is ok
[2026-03-06 11:49:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 11:49:28] Checking for apptainer binary...
[2026-03-06 11:49:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-06 11:49:28] Running /usr/bin/apptainer --version
[2026-03-06 11:49:28] apptainer version 1.3.2-1.el7
[2026-03-06 11:49:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 11:49:42] cg-vwn430.simple-grid.lan
[2026-03-06 11:49:42] apptainer works
[2026-03-06 11:49:42] Set ATHENA_PROC_NUMBER=8
[2026-03-06 11:49:42] Set ATHENA_CORE_NUMBER=8
[2026-03-06 11:49:42] Starting ATLAS job with PandaID=7042544472
[2026-03-06 11:49:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 17:06:46]  *** The last 200 lines of the pilot log: ***
[2026-03-06 17:06:46] 2026-03-06 16:05:51,222 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7042544472/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 17:06:46] 2026-03-06 16:05:51,223 | INFO     | extracted standard info from prmon json
[2026-03-06 17:06:46] 2026-03-06 16:05:51,223 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 17:06:46] 2026-03-06 16:05:51,224 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 17:06:46] 2026-03-06 16:05:51,224 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 17:06:46] 2026-03-06 16:05:51,224 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 17:06:46] 2026-03-06 16:05:51,231 | INFO     | fitting pss+swap vs Time
[2026-03-06 17:06:46] 2026-03-06 16:05:51,231 | INFO     | sum of square deviations: 8372156975.0
[2026-03-06 17:06:46] 2026-03-06 16:05:51,234 | INFO     | sum of deviations: 168615307661.5
[2026-03-06 17:06:46] 2026-03-06 16:05:51,235 | INFO     | mean x: 1772803999.5
[2026-03-06 17:06:46] 2026-03-06 16:05:51,235 | INFO     | mean y: 2456467.4166666665
[2026-03-06 17:06:46] 2026-03-06 16:05:51,235 | INFO     | intersect: -35701830097.18519
[2026-03-06 17:06:46] 2026-03-06 16:05:51,236 | INFO     | chi2: 7.988326074811382
[2026-03-06 17:06:46] 2026-03-06 16:05:51,236 | INFO     | sum of square deviations: 7960484140.0
[2026-03-06 17:06:46] 2026-03-06 16:05:51,239 | INFO     | sum of deviations: 185620349428.0001
[2026-03-06 17:06:46] 2026-03-06 16:05:51,239 | INFO     | mean x: 1772803847.0
[2026-03-06 17:06:46] 2026-03-06 16:05:51,240 | INFO     | mean y: 2462665.4576271186
[2026-03-06 17:06:46] 2026-03-06 16:05:51,240 | INFO     | intersect: -41335283099.769516
[2026-03-06 17:06:46] 2026-03-06 16:05:51,240 | INFO     | chi2: 7.262028133718104
[2026-03-06 17:06:46] 2026-03-06 16:05:51,240 | INFO     | current chi2=7.262028133718104 (change=9.09199166748369 %)
[2026-03-06 17:06:46] 2026-03-06 16:05:51,240 | INFO     | right removable region: 294
[2026-03-06 17:06:46] 2026-03-06 16:05:51,241 | INFO     | sum of square deviations: 7960484140.0
[2026-03-06 17:06:46] 2026-03-06 16:05:51,244 | INFO     | sum of deviations: 63689647502.000015
[2026-03-06 17:06:46] 2026-03-06 16:05:51,244 | INFO     | mean x: 1772804152.0
[2026-03-06 17:06:46] 2026-03-06 16:05:51,244 | INFO     | mean y: 2495315.3898305083
[2026-03-06 17:06:46] 2026-03-06 16:05:51,245 | INFO     | intersect: -14181223858.62539
[2026-03-06 17:06:46] 2026-03-06 16:05:51,245 | INFO     | chi2: 3.163128171163052
[2026-03-06 17:06:46] 2026-03-06 16:05:51,245 | INFO     | current chi2=3.163128171163052 (change=60.40311647847025 %)
[2026-03-06 17:06:46] 2026-03-06 16:05:51,246 | INFO     | sum of square deviations: 7562532492.5
[2026-03-06 17:06:46] 2026-03-06 16:05:51,249 | INFO     | sum of deviations: -7750532022.000008
[2026-03-06 17:06:46] 2026-03-06 16:05:51,249 | INFO     | mean x: 1772804304.5
[2026-03-06 17:06:46] 2026-03-06 16:05:51,249 | INFO     | mean y: 2522618.8206896554
[2026-03-06 17:06:46] 2026-03-06 16:05:51,249 | INFO     | intersect: 1819397659.6080537
[2026-03-06 17:06:46] 2026-03-06 16:05:51,250 | INFO     | chi2: 0.8814804739172561
[2026-03-06 17:06:46] 2026-03-06 16:05:51,250 | INFO     | current chi2=0.8814804739172561 (change=72.13263496707614 %)
[2026-03-06 17:06:46] 2026-03-06 16:05:51,250 | INFO     | sum of square deviations: 7178069470.0
[2026-03-06 17:06:46] 2026-03-06 16:05:51,253 | INFO     | sum of deviations: -19670075860.0
[2026-03-06 17:06:46] 2026-03-06 16:05:51,253 | INFO     | mean x: 1772804457.0
[2026-03-06 17:06:46] 2026-03-06 16:05:51,254 | INFO     | mean y: 2527320.6
[2026-03-06 17:06:46] 2026-03-06 16:05:51,254 | INFO     | intersect: 4860546360.381752
[2026-03-06 17:06:46] 2026-03-06 16:05:51,254 | INFO     | chi2: 0.8033099151466693
[2026-03-06 17:06:46] 2026-03-06 16:05:51,254 | INFO     | current chi2=0.8033099151466693 (change=8.868098736572204 %)
[2026-03-06 17:06:46] 2026-03-06 16:05:51,255 | INFO     | left removable region: 30
[2026-03-06 17:06:46] 2026-03-06 16:05:51,255 | INFO     | sum of square deviations: 5705372090.0
[2026-03-06 17:06:46] 2026-03-06 16:05:51,258 | INFO     | sum of deviations: -2215952368.0000005
[2026-03-06 17:06:46] 2026-03-06 16:05:51,258 | INFO     | mean x: 1772804731.5
[2026-03-06 17:06:46] 2026-03-06 16:05:51,258 | INFO     | mean y: 2535824.242424242
[2026-03-06 17:06:46] 2026-03-06 16:05:51,258 | INFO     | intersect: 691088784.6452277
[2026-03-06 17:06:46] 2026-03-06 16:05:51,259 | INFO     | chi2: 0.006813989955945642
[2026-03-06 17:06:46] 2026-03-06 16:05:51,259 | INFO     | current memory leak: -0.39 B/s (using 264 data points, chi2=0.01)
[2026-03-06 17:06:46] 2026-03-06 16:05:51,260 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-03-06 17:06:46] 2026-03-06 16:05:51,260 | INFO     | ..............................
[2026-03-06 17:06:46] 2026-03-06 16:05:51,260 | INFO     | . Timing measurements:
[2026-03-06 17:06:46] 2026-03-06 16:05:51,260 | INFO     | . get job = 0 s
[2026-03-06 17:06:46] 2026-03-06 16:05:51,260 | INFO     | . initial setup = 115 s
[2026-03-06 17:06:46] 2026-03-06 16:05:51,260 | INFO     | . payload setup = 157 s
[2026-03-06 17:06:46] 2026-03-06 16:05:51,260 | INFO     | . stage-in = 0 s
[2026-03-06 17:06:46] 2026-03-06 16:05:51,261 | INFO     | . payload execution = 18411 s
[2026-03-06 17:06:46] 2026-03-06 16:05:51,261 | INFO     | . stage-out = 1 s
[2026-03-06 17:06:46] 2026-03-06 16:05:51,261 | INFO     | . log creation = 0 s
[2026-03-06 17:06:46] 2026-03-06 16:05:51,261 | INFO     | ..............................
[2026-03-06 17:06:46] 2026-03-06 16:05:51,383 | INFO     | 
[2026-03-06 17:06:46] 2026-03-06 16:05:51,384 | INFO     | job summary report
[2026-03-06 17:06:46] 2026-03-06 16:05:51,384 | INFO     | --------------------------------------------------
[2026-03-06 17:06:46] 2026-03-06 16:05:51,384 | INFO     | PanDA job id: 7042544472
[2026-03-06 17:06:46] 2026-03-06 16:05:51,384 | INFO     | task id: 48958554
[2026-03-06 17:06:46] 2026-03-06 16:05:51,384 | INFO     | errors: (none)
[2026-03-06 17:06:46] 2026-03-06 16:05:51,384 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 17:06:46] 2026-03-06 16:05:51,384 | INFO     | pilot state: finished 
[2026-03-06 17:06:46] 2026-03-06 16:05:51,384 | INFO     | transexitcode: 0
[2026-03-06 17:06:46] 2026-03-06 16:05:51,385 | INFO     | exeerrorcode: 0
[2026-03-06 17:06:46] 2026-03-06 16:05:51,385 | INFO     | exeerrordiag: 
[2026-03-06 17:06:46] 2026-03-06 16:05:51,385 | INFO     | exitcode: 0
[2026-03-06 17:06:46] 2026-03-06 16:05:51,385 | INFO     | exitmsg: OK
[2026-03-06 17:06:46] 2026-03-06 16:05:51,385 | INFO     | cpuconsumptiontime: 68842 s
[2026-03-06 17:06:46] 2026-03-06 16:05:51,385 | INFO     | nevents: 400
[2026-03-06 17:06:46] 2026-03-06 16:05:51,385 | INFO     | neventsw: 0
[2026-03-06 17:06:46] 2026-03-06 16:05:51,385 | INFO     | pid: 9362
[2026-03-06 17:06:46] 2026-03-06 16:05:51,385 | INFO     | pgrp: 9362
[2026-03-06 17:06:46] 2026-03-06 16:05:51,386 | INFO     | corecount: 8
[2026-03-06 17:06:46] 2026-03-06 16:05:51,386 | INFO     | event service: False
[2026-03-06 17:06:46] 2026-03-06 16:05:51,386 | INFO     | sizes: {0: 2295309, 1: 2295770, 2: 2295770, 18573: 2328246, 18575: 2337244, 18576: 2337300, 18579: 2337622}
[2026-03-06 17:06:46] 2026-03-06 16:05:51,386 | INFO     | --------------------------------------------------
[2026-03-06 17:06:46] 2026-03-06 16:05:51,386 | INFO     | 
[2026-03-06 17:06:46] 2026-03-06 16:05:51,386 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-03-06 17:06:46] 2026-03-06 16:05:51,441 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 17:06:46] 2026-03-06 16:05:51,441 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 17:06:46] 2026-03-06 16:05:51,441 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 17:06:46] 2026-03-06 16:05:51,441 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 17:06:46] 2026-03-06 16:05:51,441 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 17:06:46] 2026-03-06 16:05:51,442 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 17:06:46] 2026-03-06 16:05:51,442 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 17:06:46] 2026-03-06 16:05:51,442 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 17:06:46] 2026-03-06 16:05:51,442 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 17:06:46] 2026-03-06 16:05:51,442 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 17:06:46] 2026-03-06 16:05:51,442 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 17:06:46] 2026-03-06 16:05:51,442 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 17:06:46] 2026-03-06 16:05:51,442 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 17:06:46] 2026-03-06 16:05:51,443 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 17:06:46] 2026-03-06 16:05:51,443 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 17:06:46] 2026-03-06 16:05:51,443 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 17:06:46] 2026-03-06 16:05:51,443 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 17:06:46] 2026-03-06 16:05:51,443 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 17:06:46] 2026-03-06 16:05:51,444 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 17:06:46] 2026-03-06 16:05:51,444 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 17:06:46] 2026-03-06 16:05:51,444 | INFO     | job 7042544472 has completed (purged errors)
[2026-03-06 17:06:46] 2026-03-06 16:05:51,444 | INFO     | overall cleanup function is called
[2026-03-06 17:06:46] 2026-03-06 16:05:52,453 | INFO     | --- collectZombieJob: --- 10, [9362]
[2026-03-06 17:06:46] 2026-03-06 16:05:52,453 | INFO     | zombie collector waiting for pid 9362
[2026-03-06 17:06:46] 2026-03-06 16:05:52,454 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 17:06:46] 2026-03-06 16:05:52,454 | INFO     | collected zombie processes
[2026-03-06 17:06:46] 2026-03-06 16:05:52,454 | INFO     | will attempt to kill all subprocesses of pid=9362
[2026-03-06 17:06:46] 2026-03-06 16:05:52,522 | INFO     | process IDs to be killed: [9362] (in reverse order)
[2026-03-06 17:06:46] 2026-03-06 16:05:52,595 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 17:06:46] 2026-03-06 16:05:52,595 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 17:06:46] 2026-03-06 16:05:52,598 | INFO     | did not find any defunct processes belonging to 9362
[2026-03-06 17:06:46] 2026-03-06 16:05:52,600 | INFO     | did not find any defunct processes belonging to 9362
[2026-03-06 17:06:46] 2026-03-06 16:05:52,600 | INFO     | ready for new job
[2026-03-06 17:06:46] 2026-03-06 16:05:52,600 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 17:06:46] 2026-03-06 16:05:52,602 | INFO     | **************************************
[2026-03-06 17:06:46] 2026-03-06 16:05:52,603 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 17:06:46] 2026-03-06 16:05:52,603 | INFO     | **************************************
[2026-03-06 17:06:46] 2026-03-06 16:05:52,603 | INFO     | 
[2026-03-06 17:06:46] 2026-03-06 16:05:52,604 | INFO     | pilot is running in a VM
[2026-03-06 17:06:46] 2026-03-06 16:05:52,604 | INFO     | architecture information:
[2026-03-06 17:06:46] 2026-03-06 16:05:52,604 | INFO     | executing command: cat /etc/os-release
[2026-03-06 17:06:46] 2026-03-06 16:05:52,627 | INFO     | cat /etc/os-release:
[2026-03-06 17:06:46] NAME="CentOS Linux"
[2026-03-06 17:06:46] VERSION="7 (Core)"
[2026-03-06 17:06:46] ID="centos"
[2026-03-06 17:06:46] ID_LIKE="rhel fedora"
[2026-03-06 17:06:46] VERSION_ID="7"
[2026-03-06 17:06:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 17:06:46] ANSI_COLOR="0;31"
[2026-03-06 17:06:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 17:06:46] HOME_URL="https://www.centos.org/"
[2026-03-06 17:06:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 17:06:46] 
[2026-03-06 17:06:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 17:06:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 17:06:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 17:06:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 17:06:46] 
[2026-03-06 17:06:46] 2026-03-06 16:05:52,627 | INFO     | **************************************
[2026-03-06 17:06:46] 2026-03-06 16:05:53,131 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-03-06 17:06:46] 2026-03-06 16:05:53,155 | INFO     | sufficient remaining disk space (495446917120 B)
[2026-03-06 17:06:46] 2026-03-06 16:05:53,155 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 17:06:46] 2026-03-06 16:05:53,156 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 17:06:46] 2026-03-06 16:05:53,156 | INFO     | update_server=False
[2026-03-06 17:06:46] 2026-03-06 16:05:53,156 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 17:06:46] 2026-03-06 16:05:53,156 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 17:06:46] 2026-03-06 16:05:53,236 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 17:06:46] 2026-03-06 16:05:53,256 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-06 17:06:46] 2026-03-06 16:05:53,257 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-06 17:06:46] 2026-03-06 16:05:53,257 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 17:06:46] 2026-03-06 16:05:53,257 | INFO     | will abort loop
[2026-03-06 17:06:46] 2026-03-06 16:05:53,413 | INFO     | all data control threads have been joined
[2026-03-06 17:06:46] 2026-03-06 16:05:53,614 | INFO     | all payload control threads have been joined
[2026-03-06 17:06:46] 2026-03-06 16:05:54,039 | INFO     | all job control threads have been joined
[2026-03-06 17:06:46] 2026-03-06 16:05:54,162 | INFO     | [job] retrieve thread has finished
[2026-03-06 17:06:46] 2026-03-06 16:05:54,162 | INFO     | [job] queue monitor thread has finished
[2026-03-06 17:06:46] 2026-03-06 16:05:54,260 | INFO     | [job] job monitor thread has finished
[2026-03-06 17:06:46] 2026-03-06 16:05:54,419 | INFO     | [data] control thread has finished
[2026-03-06 17:06:46] 2026-03-06 16:05:54,620 | INFO     | [payload] control thread has finished
[2026-03-06 17:06:46] 2026-03-06 16:05:54,636 | INFO     | [job] validate thread has finished
[2026-03-06 17:06:46] 2026-03-06 16:05:54,693 | INFO     | [data] copytool_in thread has finished
[2026-03-06 17:06:46] 2026-03-06 16:05:54,874 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 17:06:46] 2026-03-06 16:05:54,999 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 17:06:46] 2026-03-06 16:05:55,000 | INFO     | [payload] validate_post thread has finished
[2026-03-06 17:06:46] 2026-03-06 16:05:55,045 | INFO     | [job] control thread has finished
[2026-03-06 17:06:46] 2026-03-06 16:05:55,157 | INFO     | [payload] failed_post thread has finished
[2026-03-06 17:06:46] 2026-03-06 16:05:55,242 | INFO     | [data] copytool_out thread has finished
[2026-03-06 17:06:46] 2026-03-06 16:05:55,312 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 17:06:46] 2026-03-06 16:05:55,500 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 17:06:46] 2026-03-06 16:05:59,009 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 17:06:46] 2026-03-06 16:06:04,047 | INFO     | job.realtimelogging is not enabled
[2026-03-06 17:06:46] 2026-03-06 16:06:05,053 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 17:06:46] 2026-03-06 16:06:23,101 | INFO     | PID=4902 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-06 17:06:46] 2026-03-06 16:06:23,101 | INFO     | .. there are 2 such processes running
[2026-03-06 17:06:46] 2026-03-06 16:06:23,101 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 17:06:46] 2026-03-06 16:06:23,101 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 17:06:46] 2026-03-06 16:06:23,102 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 17:06:46] 2026-03-06 16:06:40,978 | INFO     | [monitor] cgroup control has ended
[2026-03-06 17:06:46] 2026-03-06 16:06:41,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139770492634944)>', '<ExcThread(monitor, started 139770197939968)>']
[2026-03-06 17:06:46] 2026-03-06 16:06:42,199 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 17:06:46] 2026-03-06 16:06:42,200 | INFO     | [monitor] control thread has ended
[2026-03-06 17:06:46] 2026-03-06 16:06:46,455 | INFO     | all workflow threads have been joined
[2026-03-06 17:06:46] 2026-03-06 16:06:46,455 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 17:06:46] 2026-03-06 16:06:46,455 | INFO     | traces error code: 0
[2026-03-06 17:06:46] 2026-03-06 16:06:46,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 17:06:46] 2026-03-06 16:06:46,614 [wrapper] ==== pilot stdout END ====
[2026-03-06 17:06:46] 2026-03-06 16:06:46,619 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 17:06:46] 2026-03-06 16:06:46,626 [wrapper] pilotpid: 4902
[2026-03-06 17:06:46] 2026-03-06 16:06:46,630 [wrapper] Pilot exit status: 0
[2026-03-06 17:06:46] 2026-03-06 16:06:46,666 [wrapper] pandaids: 7042544472
[2026-03-06 17:06:46] 2026-03-06 16:06:46,710 [wrapper] cleanup supervisor_pilot 16785 4903
[2026-03-06 17:06:46] 2026-03-06 16:06:46,715 [wrapper] Test setup, not cleaning
[2026-03-06 17:06:46] 2026-03-06 16:06:46,726 [wrapper] apfmon messages muted
[2026-03-06 17:06:46] 2026-03-06 16:06:46,730 [wrapper] ==== wrapper stdout END ====
[2026-03-06 17:06:46] 2026-03-06 16:06:46,733 [wrapper] ==== wrapper stderr END ====
[2026-03-06 17:06:46]  *** Error codes and diagnostics ***
[2026-03-06 17:06:46]     "exeErrorCode": 0,
[2026-03-06 17:06:46]     "exeErrorDiag": "",
[2026-03-06 17:06:46]     "pilotErrorCode": 0,
[2026-03-06 17:06:46]     "pilotErrorDiag": "",
[2026-03-06 17:06:46]  *** Listing of results directory ***
[2026-03-06 17:06:46] total 480740
[2026-03-06 17:06:46] -rw-r--r--. 1 boinc boinc    584627 Mar  5 23:42 pilot3.tar.gz
[2026-03-06 17:06:46] -rw-r--r--. 1 boinc boinc      5111 Mar  6 00:16 queuedata.json
[2026-03-06 17:06:46] -rwx------. 1 boinc boinc     36322 Mar  6 00:17 runpilot2-wrapper.sh
[2026-03-06 17:06:46] -rw-r--r--. 1 boinc boinc       100 Mar  6 11:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 17:06:46] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 11:49 run_atlas
[2026-03-06 17:06:46] -rw-r--r--. 1 boinc boinc       105 Mar  6 11:49 job.xml
[2026-03-06 17:06:46] -rw-r--r--. 2 boinc boinc 275639036 Mar  6 11:49 EVNT.48958551._000034.pool.root.1
[2026-03-06 17:06:46] -rw-r--r--. 2 boinc boinc     15845 Mar  6 11:49 start_atlas.sh
[2026-03-06 17:06:46] drwxrwx--x. 2 boinc boinc        68 Mar  6 11:49 shared
[2026-03-06 17:06:46] -rw-r--r--. 2 boinc boinc    597944 Mar  6 11:49 input.tar.gz
[2026-03-06 17:06:46] -rw-r--r--. 1 boinc boinc      6390 Mar  6 11:49 init_data.xml
[2026-03-06 17:06:46] -rw-r--r--. 1 boinc boinc         0 Mar  6 11:49 boinc_lockfile
[2026-03-06 17:06:46] -rw-r--r--. 1 boinc boinc      2515 Mar  6 11:49 pandaJob.out
[2026-03-06 17:06:46] -rw-------. 1 boinc boinc       415 Mar  6 11:56 workernode_map.json
[2026-03-06 17:06:46] -rw-------. 1 boinc boinc    998153 Mar  6 11:56 agis_schedconf.cvmfs.json
[2026-03-06 17:06:46] drwx------. 5 boinc boinc      4096 Mar  6 11:56 pilot3
[2026-03-06 17:06:46] -rw-------. 1 boinc boinc 206470237 Mar  6 17:05 HITS.48958554._000794.pool.root.1
[2026-03-06 17:06:46] -rw-r--r--. 1 boinc boinc       531 Mar  6 17:05 boinc_task_state.xml
[2026-03-06 17:06:46] -rw-------. 1 boinc boinc        95 Mar  6 17:05 pilot_heartbeat.json
[2026-03-06 17:06:46] -rw-------. 1 boinc boinc      1013 Mar  6 17:05 memory_monitor_summary.json
[2026-03-06 17:06:46] -rw-------. 1 boinc boinc   1521291 Mar  6 17:05 agis_ddmendpoints.agis.ALL.json
[2026-03-06 17:06:46] -rw-------. 1 boinc boinc    522255 Mar  6 17:05 log.48958554._000794.job.log.tgz.1
[2026-03-06 17:06:46] -rw-------. 1 boinc boinc      6312 Mar  6 17:05 heartbeat.json
[2026-03-06 17:06:46] -rw-r--r--. 1 boinc boinc      8192 Mar  6 17:06 boinc_mmap_file
[2026-03-06 17:06:46] -rw-r--r--. 1 boinc boinc        28 Mar  6 17:06 wrapper_checkpoint.txt
[2026-03-06 17:06:46] -rw-------. 1 boinc boinc      5137 Mar  6 17:06 pilotlog.txt
[2026-03-06 17:06:46] -rw-------. 1 boinc boinc   2600292 Mar  6 17:06 log.48958554._000794.job.log.1
[2026-03-06 17:06:46] -rw-------. 1 boinc boinc       357 Mar  6 17:06 output.list
[2026-03-06 17:06:46] -rw-r--r--. 1 boinc boinc       620 Mar  6 17:06 runtime_log
[2026-03-06 17:06:46] -rw-------. 1 boinc boinc   3143680 Mar  6 17:06 result.tar.gz
[2026-03-06 17:06:46] -rw-r--r--. 1 boinc boinc      8816 Mar  6 17:06 runtime_log.err
[2026-03-06 17:06:46] -rw-------. 1 boinc boinc       656 Mar  6 17:06 m7LNDmW7WI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmYPPLDmZf6mmn.diag
[2026-03-06 17:06:46] -rw-r--r--. 1 boinc boinc     20682 Mar  6 17:06 stderr.txt
[2026-03-06 17:06:46] HITS file was successfully produced:
[2026-03-06 17:06:46] -rw-------. 1 boinc boinc 206470237 Mar  6 17:05 shared/HITS.pool.root.1
[2026-03-06 17:06:46]  *** Contents of shared directory: ***
[2026-03-06 17:06:46] total 474484
[2026-03-06 17:06:46] -rw-r--r--. 2 boinc boinc 275639036 Mar  6 11:49 ATLAS.root_0
[2026-03-06 17:06:46] -rw-r--r--. 2 boinc boinc     15845 Mar  6 11:49 start_atlas.sh
[2026-03-06 17:06:46] -rw-r--r--. 2 boinc boinc    597944 Mar  6 11:49 input.tar.gz
[2026-03-06 17:06:46] -rw-------. 1 boinc boinc 206470237 Mar  6 17:05 HITS.pool.root.1
[2026-03-06 17:06:46] -rw-------. 1 boinc boinc   3143680 Mar  6 17:06 result.tar.gz
17:06:48 (897): run_atlas exited; CPU time 69050.297150
17:06:48 (897): called boinc_finish(0)

</stderr_txt>
]]>

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