Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
06:27:39 (1866033): wrapper (7.7.26015): starting
06:27:39 (1866033): wrapper: running run_atlas (--nthreads 2)
[2026-03-06 06:27:39] Arguments: --nthreads 2
[2026-03-06 06:27:39] Threads: 2
[2026-03-06 06:27:39] Checking for CVMFS
[2026-03-06 06:27:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 06:27:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 06:27:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 06:27:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 06:27:44] 2.13.3.0 876980 3367 59728 156946 3 49 2234136 4096001 0 130560 0 400845 99.949 120329 79 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
[2026-03-06 06:27:44] CVMFS is ok
[2026-03-06 06:27:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 06:27:44] Checking for apptainer binary...
[2026-03-06 06:27:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-06 06:27:44] Running /usr/bin/apptainer --version
[2026-03-06 06:27:44] apptainer version 1.4.5-3.el9
[2026-03-06 06:27:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 06:27:44] ahanllin05
[2026-03-06 06:27:44] apptainer works
[2026-03-06 06:27:44] Set ATHENA_PROC_NUMBER=2
[2026-03-06 06:27:44] Set ATHENA_CORE_NUMBER=2
[2026-03-06 06:27:44] Starting ATLAS job with PandaID=7042761378
[2026-03-06 06:27:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 12:08:38]  *** The last 200 lines of the pilot log: ***
[2026-03-06 12:08:38] 2026-03-06 11:07:33,697 | INFO     | job 7042761378 has state=finished
[2026-03-06 12:08:38] 2026-03-06 11:07:33,698 | INFO     | preparing for final server update for job 7042761378 in state='finished'
[2026-03-06 12:08:38] 2026-03-06 11:07:33,698 | INFO     | reading metadata from: /var/lib/boinc/slots/0/PanDA_Pilot-7042761378/jobReport.json
[2026-03-06 12:08:38] 2026-03-06 11:07:33,698 | INFO     | time since job start (20374s) is within the limit (349056.0s)
[2026-03-06 12:08:38] 2026-03-06 11:07:33,699 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/0/workernode_map.json
[2026-03-06 12:08:38] 2026-03-06 11:07:33,699 | INFO     | this job has now completed (state=finished)
[2026-03-06 12:08:38] 2026-03-06 11:07:33,699 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-06 12:08:38] 2026-03-06 11:07:33,699 | INFO     | log transfer has been attempted: DONE
[2026-03-06 12:08:38] 2026-03-06 11:07:33,700 | INFO     | job 7042761378 has finished - writing final server update
[2026-03-06 12:08:38] 2026-03-06 11:07:33,700 | INFO     | total number of processed events: 400 (read)
[2026-03-06 12:08:38] 2026-03-06 11:07:33,701 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-7042761378/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 12:08:38] 2026-03-06 11:07:33,701 | INFO     | extracted standard info from prmon json
[2026-03-06 12:08:38] 2026-03-06 11:07:33,701 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 12:08:38] 2026-03-06 11:07:33,701 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 12:08:38] 2026-03-06 11:07:33,701 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 12:08:38] 2026-03-06 11:07:33,701 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 12:08:38] 2026-03-06 11:07:33,703 | INFO     | fitting pss+swap vs Time
[2026-03-06 12:08:38] 2026-03-06 11:07:33,704 | INFO     | sum of square deviations: 11553509647.5
[2026-03-06 12:08:38] 2026-03-06 11:07:33,705 | INFO     | sum of deviations: -127625090599.99998
[2026-03-06 12:08:38] 2026-03-06 11:07:33,705 | INFO     | mean x: 1772785052.5
[2026-03-06 12:08:38] 2026-03-06 11:07:33,705 | INFO     | mean y: 2353134.6706586825
[2026-03-06 12:08:38] 2026-03-06 11:07:33,705 | INFO     | intersect: 19585307565.196938
[2026-03-06 12:08:38] 2026-03-06 11:07:33,705 | INFO     | chi2: 1.7220109075385042
[2026-03-06 12:08:38] 2026-03-06 11:07:33,706 | INFO     | sum of square deviations: 11042365180.0
[2026-03-06 12:08:38] 2026-03-06 11:07:33,707 | INFO     | sum of deviations: -124645201682.00003
[2026-03-06 12:08:38] 2026-03-06 11:07:33,707 | INFO     | mean x: 1772784900.0
[2026-03-06 12:08:38] 2026-03-06 11:07:33,707 | INFO     | mean y: 2354022.1914893617
[2026-03-06 12:08:38] 2026-03-06 11:07:33,707 | INFO     | intersect: 20013386785.310474
[2026-03-06 12:08:38] 2026-03-06 11:07:33,707 | INFO     | chi2: 1.7175996718199613
[2026-03-06 12:08:38] 2026-03-06 11:07:33,707 | INFO     | current chi2=1.7175996718199613 (change=0.25616769901001424 %)
[2026-03-06 12:08:38] 2026-03-06 11:07:33,707 | INFO     | right removable region: 328
[2026-03-06 12:08:38] 2026-03-06 11:07:33,707 | INFO     | sum of square deviations: 11042365180.0
[2026-03-06 12:08:38] 2026-03-06 11:07:33,709 | INFO     | sum of deviations: -145556859098.0
[2026-03-06 12:08:38] 2026-03-06 11:07:33,709 | INFO     | mean x: 1772785205.0
[2026-03-06 12:08:38] 2026-03-06 11:07:33,709 | INFO     | mean y: 2358379.914893617
[2026-03-06 12:08:38] 2026-03-06 11:07:33,709 | INFO     | intersect: 23370635201.85605
[2026-03-06 12:08:38] 2026-03-06 11:07:33,709 | INFO     | chi2: 0.6772202477239572
[2026-03-06 12:08:38] 2026-03-06 11:07:33,709 | INFO     | current chi2=0.6772202477239572 (change=60.67270858975006 %)
[2026-03-06 12:08:38] 2026-03-06 11:07:33,709 | INFO     | sum of square deviations: 10546523325.0
[2026-03-06 12:08:38] 2026-03-06 11:07:33,710 | INFO     | sum of deviations: -129216815510.99998
[2026-03-06 12:08:38] 2026-03-06 11:07:33,710 | INFO     | mean x: 1772785357.5
[2026-03-06 12:08:38] 2026-03-06 11:07:33,710 | INFO     | mean y: 2353353.734567901
[2026-03-06 12:08:38] 2026-03-06 11:07:33,710 | INFO     | intersect: 21722655999.600063
[2026-03-06 12:08:38] 2026-03-06 11:07:33,711 | INFO     | chi2: 0.6466057392268015
[2026-03-06 12:08:38] 2026-03-06 11:07:33,711 | INFO     | current chi2=0.6466057392268015 (change=4.520613286452484 %)
[2026-03-06 12:08:38] 2026-03-06 11:07:33,711 | INFO     | left removable region: 20
[2026-03-06 12:08:38] 2026-03-06 11:07:33,711 | INFO     | sum of square deviations: 9059954057.0
[2026-03-06 12:08:38] 2026-03-06 11:07:33,712 | INFO     | sum of deviations: -92441570807.00005
[2026-03-06 12:08:38] 2026-03-06 11:07:33,712 | INFO     | mean x: 1772785479.5
[2026-03-06 12:08:38] 2026-03-06 11:07:33,712 | INFO     | mean y: 2343234.9805194805
[2026-03-06 12:08:38] 2026-03-06 11:07:33,712 | INFO     | intersect: 18090633020.755177
[2026-03-06 12:08:38] 2026-03-06 11:07:33,712 | INFO     | chi2: 0.5522630221769226
[2026-03-06 12:08:38] 2026-03-06 11:07:33,712 | INFO     | current memory leak: -10.20 B/s (using 308 data points, chi2=0.55)
[2026-03-06 12:08:38] 2026-03-06 11:07:33,713 | INFO     | could have reported an average CPU frequency of 806 MHz (15 samples)
[2026-03-06 12:08:38] 2026-03-06 11:07:33,713 | INFO     | ..............................
[2026-03-06 12:08:38] 2026-03-06 11:07:33,713 | INFO     | . Timing measurements:
[2026-03-06 12:08:38] 2026-03-06 11:07:33,713 | INFO     | . get job = 0 s
[2026-03-06 12:08:38] 2026-03-06 11:07:33,713 | INFO     | . initial setup = 3 s
[2026-03-06 12:08:38] 2026-03-06 11:07:33,713 | INFO     | . payload setup = 2 s
[2026-03-06 12:08:38] 2026-03-06 11:07:33,713 | INFO     | . stage-in = 0 s
[2026-03-06 12:08:38] 2026-03-06 11:07:33,713 | INFO     | . payload execution = 20354 s
[2026-03-06 12:08:38] 2026-03-06 11:07:33,713 | INFO     | . stage-out = 0 s
[2026-03-06 12:08:38] 2026-03-06 11:07:33,713 | INFO     | . log creation = 0 s
[2026-03-06 12:08:38] 2026-03-06 11:07:33,713 | INFO     | ..............................
[2026-03-06 12:08:38] 2026-03-06 11:07:33,747 | INFO     | 
[2026-03-06 12:08:38] 2026-03-06 11:07:33,747 | INFO     | job summary report
[2026-03-06 12:08:38] 2026-03-06 11:07:33,747 | INFO     | --------------------------------------------------
[2026-03-06 12:08:38] 2026-03-06 11:07:33,747 | INFO     | PanDA job id: 7042761378
[2026-03-06 12:08:38] 2026-03-06 11:07:33,747 | INFO     | task id: 48958554
[2026-03-06 12:08:38] 2026-03-06 11:07:33,747 | INFO     | errors: (none)
[2026-03-06 12:08:38] 2026-03-06 11:07:33,747 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 12:08:38] 2026-03-06 11:07:33,747 | INFO     | pilot state: finished 
[2026-03-06 12:08:38] 2026-03-06 11:07:33,747 | INFO     | transexitcode: 0
[2026-03-06 12:08:38] 2026-03-06 11:07:33,747 | INFO     | exeerrorcode: 0
[2026-03-06 12:08:38] 2026-03-06 11:07:33,747 | INFO     | exeerrordiag: 
[2026-03-06 12:08:38] 2026-03-06 11:07:33,747 | INFO     | exitcode: 0
[2026-03-06 12:08:38] 2026-03-06 11:07:33,747 | INFO     | exitmsg: OK
[2026-03-06 12:08:38] 2026-03-06 11:07:33,747 | INFO     | cpuconsumptiontime: 38952 s
[2026-03-06 12:08:38] 2026-03-06 11:07:33,747 | INFO     | nevents: 400
[2026-03-06 12:08:38] 2026-03-06 11:07:33,747 | INFO     | neventsw: 0
[2026-03-06 12:08:38] 2026-03-06 11:07:33,747 | INFO     | pid: 1874578
[2026-03-06 12:08:38] 2026-03-06 11:07:33,747 | INFO     | pgrp: 1874578
[2026-03-06 12:08:38] 2026-03-06 11:07:33,748 | INFO     | corecount: 2
[2026-03-06 12:08:38] 2026-03-06 11:07:33,748 | INFO     | event service: False
[2026-03-06 12:08:38] 2026-03-06 11:07:33,748 | INFO     | sizes: {0: 2295746, 11: 2295746, 20360: 2329454, 20361: 2338508, 20363: 2338646}
[2026-03-06 12:08:38] 2026-03-06 11:07:33,748 | INFO     | --------------------------------------------------
[2026-03-06 12:08:38] 2026-03-06 11:07:33,748 | INFO     | 
[2026-03-06 12:08:38] 2026-03-06 11:07:33,748 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-03-06 12:08:38] 2026-03-06 11:07:33,758 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 12:08:38] 2026-03-06 11:07:33,758 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 12:08:38] 2026-03-06 11:07:33,758 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 12:08:38] 2026-03-06 11:07:33,758 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 12:08:38] 2026-03-06 11:07:33,758 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 12:08:38] 2026-03-06 11:07:33,758 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 12:08:38] 2026-03-06 11:07:33,758 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 12:08:38] 2026-03-06 11:07:33,758 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 12:08:38] 2026-03-06 11:07:33,759 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 12:08:38] 2026-03-06 11:07:33,759 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 12:08:38] 2026-03-06 11:07:33,759 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 12:08:38] 2026-03-06 11:07:33,759 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 12:08:38] 2026-03-06 11:07:33,759 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 12:08:38] 2026-03-06 11:07:33,759 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 12:08:38] 2026-03-06 11:07:33,759 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 12:08:38] 2026-03-06 11:07:33,759 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 12:08:38] 2026-03-06 11:07:33,759 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 12:08:38] 2026-03-06 11:07:33,759 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 12:08:38] 2026-03-06 11:07:33,759 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 12:08:38] 2026-03-06 11:07:33,759 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 12:08:38] 2026-03-06 11:07:33,759 | INFO     | job 7042761378 has completed (purged errors)
[2026-03-06 12:08:38] 2026-03-06 11:07:33,759 | INFO     | overall cleanup function is called
[2026-03-06 12:08:38] 2026-03-06 11:07:34,765 | INFO     | --- collectZombieJob: --- 10, [1874578]
[2026-03-06 12:08:38] 2026-03-06 11:07:34,766 | INFO     | zombie collector waiting for pid 1874578
[2026-03-06 12:08:38] 2026-03-06 11:07:34,766 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 12:08:38] 2026-03-06 11:07:34,766 | INFO     | collected zombie processes
[2026-03-06 12:08:38] 2026-03-06 11:07:34,766 | INFO     | will attempt to kill all subprocesses of pid=1874578
[2026-03-06 12:08:38] 2026-03-06 11:07:34,790 | INFO     | process IDs to be killed: [1874578] (in reverse order)
[2026-03-06 12:08:38] 2026-03-06 11:07:34,809 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 12:08:38] 2026-03-06 11:07:34,809 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 12:08:38] 2026-03-06 11:07:34,810 | INFO     | did not find any defunct processes belonging to 1874578
[2026-03-06 12:08:38] 2026-03-06 11:07:34,811 | INFO     | did not find any defunct processes belonging to 1874578
[2026-03-06 12:08:38] 2026-03-06 11:07:34,811 | INFO     | ready for new job
[2026-03-06 12:08:38] 2026-03-06 11:07:34,811 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 12:08:38] 2026-03-06 11:07:34,813 | INFO     | **************************************
[2026-03-06 12:08:38] 2026-03-06 11:07:34,814 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 12:08:38] 2026-03-06 11:07:34,814 | INFO     | **************************************
[2026-03-06 12:08:38] 2026-03-06 11:07:34,814 | INFO     | 
[2026-03-06 12:08:38] 2026-03-06 11:07:34,814 | INFO     | pilot is running in a VM
[2026-03-06 12:08:38] 2026-03-06 11:07:34,814 | INFO     | architecture information:
[2026-03-06 12:08:38] 2026-03-06 11:07:34,814 | INFO     | executing command: cat /etc/os-release
[2026-03-06 12:08:38] 2026-03-06 11:07:34,821 | INFO     | cat /etc/os-release:
[2026-03-06 12:08:38] NAME="CentOS Linux"
[2026-03-06 12:08:38] VERSION="7 (Core)"
[2026-03-06 12:08:38] ID="centos"
[2026-03-06 12:08:38] ID_LIKE="rhel fedora"
[2026-03-06 12:08:38] VERSION_ID="7"
[2026-03-06 12:08:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 12:08:38] ANSI_COLOR="0;31"
[2026-03-06 12:08:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 12:08:38] HOME_URL="https://www.centos.org/"
[2026-03-06 12:08:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 12:08:38] 
[2026-03-06 12:08:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 12:08:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 12:08:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 12:08:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 12:08:38] 
[2026-03-06 12:08:38] 2026-03-06 11:07:34,821 | INFO     | **************************************
[2026-03-06 12:08:38] 2026-03-06 11:07:35,324 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-03-06 12:08:38] 2026-03-06 11:07:35,331 | INFO     | sufficient remaining disk space (38157680640 B)
[2026-03-06 12:08:38] 2026-03-06 11:07:35,331 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 12:08:38] 2026-03-06 11:07:35,332 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 12:08:38] 2026-03-06 11:07:35,332 | INFO     | update_server=False
[2026-03-06 12:08:38] 2026-03-06 11:07:35,332 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 12:08:38] 2026-03-06 11:07:35,332 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 12:08:38] 2026-03-06 11:07:35,332 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 12:08:38] 2026-03-06 11:07:35,332 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-06 12:08:38] 2026-03-06 11:07:35,332 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 12:08:38] 2026-03-06 11:07:35,332 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 12:08:38] 2026-03-06 11:07:35,333 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 12:08:38] 2026-03-06 11:07:35,569 | INFO     | job.realtimelogging is not enabled
[2026-03-06 12:08:38] 2026-03-06 11:07:35,697 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 12:08:38] 2026-03-06 11:07:35,698 | INFO     | aborting loop
[2026-03-06 12:08:38] 2026-03-06 11:07:36,060 | INFO     | all payload control threads have been joined
[2026-03-06 12:08:38] 2026-03-06 11:07:36,081 | INFO     | all job control threads have been joined
[2026-03-06 12:08:38] 2026-03-06 11:07:36,098 | INFO     | all data control threads have been joined
[2026-03-06 12:08:38] 2026-03-06 11:07:36,332 | INFO     | [job] retrieve thread has finished
[2026-03-06 12:08:38] 2026-03-06 11:07:36,337 | INFO     | [job] queue monitor thread has finished
[2026-03-06 12:08:38] 2026-03-06 11:07:36,388 | INFO     | [payload] failed_post thread has finished
[2026-03-06 12:08:38] 2026-03-06 11:07:36,556 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 12:08:38] 2026-03-06 11:07:36,570 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 12:08:38] 2026-03-06 11:07:36,703 | INFO     | [job] job monitor thread has finished
[2026-03-06 12:08:38] 2026-03-06 11:07:36,895 | INFO     | [payload] validate_post thread has finished
[2026-03-06 12:08:38] 2026-03-06 11:07:37,065 | INFO     | [payload] control thread has finished
[2026-03-06 12:08:38] 2026-03-06 11:07:37,082 | INFO     | [job] control thread has finished
[2026-03-06 12:08:38] 2026-03-06 11:07:37,103 | INFO     | [data] control thread has finished
[2026-03-06 12:08:38] 2026-03-06 11:07:37,307 | INFO     | [job] validate thread has finished
[2026-03-06 12:08:38] 2026-03-06 11:07:37,338 | INFO     | [data] copytool_out thread has finished
[2026-03-06 12:08:38] 2026-03-06 11:07:37,553 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 12:08:38] 2026-03-06 11:07:37,553 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 12:08:38] 2026-03-06 11:07:37,629 | INFO     | [data] copytool_in thread has finished
[2026-03-06 12:08:38] 2026-03-06 11:07:38,027 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 12:08:38] 2026-03-06 11:07:42,029 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 12:08:38] 2026-03-06 11:08:33,229 | INFO     | [monitor] cgroup control has ended
[2026-03-06 12:08:38] 2026-03-06 11:08:33,542 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140569340094272)>', '<ExcThread(monitor, started 140568977995520)>']
[2026-03-06 12:08:38] 2026-03-06 11:08:34,529 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 12:08:38] 2026-03-06 11:08:34,530 | INFO     | [monitor] control thread has ended
[2026-03-06 12:08:38] 2026-03-06 11:08:38,556 | INFO     | all workflow threads have been joined
[2026-03-06 12:08:38] 2026-03-06 11:08:38,556 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 12:08:38] 2026-03-06 11:08:38,556 | INFO     | traces error code: 0
[2026-03-06 12:08:38] 2026-03-06 11:08:38,556 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 12:08:38] 2026-03-06 11:08:38,617 [wrapper] ==== pilot stdout END ====
[2026-03-06 12:08:38] 2026-03-06 11:08:38,619 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 12:08:38] 2026-03-06 11:08:38,621 [wrapper] pilotpid: 1870129
[2026-03-06 12:08:38] 2026-03-06 11:08:38,622 [wrapper] Pilot exit status: 0
[2026-03-06 12:08:38] 2026-03-06 11:08:38,629 [wrapper] pandaids: 7042761378
[2026-03-06 12:08:38] 2026-03-06 11:08:38,641 [wrapper] cleanup supervisor_pilot 1964609 1870130
[2026-03-06 12:08:38] 2026-03-06 11:08:38,643 [wrapper] Test setup, not cleaning
[2026-03-06 12:08:38] 2026-03-06 11:08:38,644 [wrapper] apfmon messages muted
[2026-03-06 12:08:38] 2026-03-06 11:08:38,646 [wrapper] ==== wrapper stdout END ====
[2026-03-06 12:08:38] 2026-03-06 11:08:38,648 [wrapper] ==== wrapper stderr END ====
[2026-03-06 12:08:38]  *** Error codes and diagnostics ***
[2026-03-06 12:08:38]     "exeErrorCode": 0,
[2026-03-06 12:08:38]     "exeErrorDiag": "",
[2026-03-06 12:08:38]     "pilotErrorCode": 0,
[2026-03-06 12:08:38]     "pilotErrorDiag": "",
[2026-03-06 12:08:38]  *** Listing of results directory ***
[2026-03-06 12:08:38] total 479852
[2026-03-06 12:08:38] -rw-r--r-- 1 boinc boinc    584627 Mar  6 03:53 pilot3.tar.gz
[2026-03-06 12:08:38] -rwx------ 1 boinc boinc     36322 Mar  6 03:53 runpilot2-wrapper.sh
[2026-03-06 12:08:38] -rw-r--r-- 1 boinc boinc      5111 Mar  6 03:54 queuedata.json
[2026-03-06 12:08:38] -rw-r--r-- 1 boinc boinc       100 Mar  6 06:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 12:08:38] -rwxr-xr-x 1 boinc boinc      7986 Mar  6 06:27 run_atlas
[2026-03-06 12:08:38] -rw-r--r-- 1 boinc boinc       105 Mar  6 06:27 job.xml
[2026-03-06 12:08:38] -rw-r--r-- 2 boinc boinc 273681047 Mar  6 06:27 EVNT.48958551._000045.pool.root.1
[2026-03-06 12:08:38] -rw-r--r-- 2 boinc boinc     15845 Mar  6 06:27 start_atlas.sh
[2026-03-06 12:08:38] drwxrwx--x 2 boinc boinc        68 Mar  6 06:27 shared
[2026-03-06 12:08:38] -rw-r--r-- 2 boinc boinc    597939 Mar  6 06:27 input.tar.gz
[2026-03-06 12:08:38] -rw-r--r-- 1 boinc boinc      6668 Mar  6 06:27 init_data.xml
[2026-03-06 12:08:38] -rw-r--r-- 1 boinc boinc         0 Mar  6 06:27 boinc_setup_complete
[2026-03-06 12:08:38] -rw-r--r-- 1 boinc boinc         0 Mar  6 06:27 boinc_lockfile
[2026-03-06 12:08:38] -rw-r--r-- 1 boinc boinc      2517 Mar  6 06:27 pandaJob.out
[2026-03-06 12:08:38] -rw------- 1 boinc boinc        42 Mar  6 06:27 setup.sh.local
[2026-03-06 12:08:38] -rw------- 1 boinc boinc    998544 Mar  6 06:27 agis_schedconf.cvmfs.json
[2026-03-06 12:08:38] -rw------- 1 boinc boinc       387 Mar  6 06:27 workernode_map.json
[2026-03-06 12:08:38] drwx------ 5 boinc boinc      4096 Mar  6 06:27 pilot3
[2026-03-06 12:08:38] -rw------- 1 boinc boinc 207176331 Mar  6 12:07 HITS.48958554._001066.pool.root.1
[2026-03-06 12:08:38] -rw------- 1 boinc boinc        95 Mar  6 12:07 pilot_heartbeat.json
[2026-03-06 12:08:38] -rw------- 1 boinc boinc       985 Mar  6 12:07 memory_monitor_summary.json
[2026-03-06 12:08:38] -rw-r--r-- 1 boinc boinc       530 Mar  6 12:07 boinc_task_state.xml
[2026-03-06 12:08:38] -rw------- 1 boinc boinc   1521291 Mar  6 12:07 agis_ddmendpoints.agis.ALL.json
[2026-03-06 12:08:38] -rw------- 1 boinc boinc    440314 Mar  6 12:07 log.48958554._001066.job.log.tgz.1
[2026-03-06 12:08:38] -rw------- 1 boinc boinc      6203 Mar  6 12:07 heartbeat.json
[2026-03-06 12:08:38] -rw-r--r-- 1 boinc boinc      8192 Mar  6 12:08 boinc_mmap_file
[2026-03-06 12:08:38] -rw-r--r-- 1 boinc boinc        28 Mar  6 12:08 wrapper_checkpoint.txt
[2026-03-06 12:08:38] -rw------- 1 boinc boinc      4682 Mar  6 12:08 pilotlog.txt
[2026-03-06 12:08:38] -rw------- 1 boinc boinc   2849634 Mar  6 12:08 log.48958554._001066.job.log.1
[2026-03-06 12:08:38] -rw------- 1 boinc boinc       357 Mar  6 12:08 output.list
[2026-03-06 12:08:38] -rw-r--r-- 1 boinc boinc       620 Mar  6 12:08 runtime_log
[2026-03-06 12:08:38] -rw------- 1 boinc boinc   3307520 Mar  6 12:08 result.tar.gz
[2026-03-06 12:08:38] -rw-r--r-- 1 boinc boinc      9248 Mar  6 12:08 runtime_log.err
[2026-03-06 12:08:38] -rw------- 1 boinc boinc       654 Mar  6 12:08 fpHLDmDVaI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmqsPLDmadckPn.diag
[2026-03-06 12:08:38] -rw-r--r-- 1 boinc boinc     20808 Mar  6 12:08 stderr.txt
[2026-03-06 12:08:38] HITS file was successfully produced:
[2026-03-06 12:08:38] -rw------- 1 boinc boinc 207176331 Mar  6 12:07 shared/HITS.pool.root.1
[2026-03-06 12:08:38]  *** Contents of shared directory: ***
[2026-03-06 12:08:38] total 473424
[2026-03-06 12:08:38] -rw-r--r-- 2 boinc boinc 273681047 Mar  6 06:27 ATLAS.root_0
[2026-03-06 12:08:38] -rw-r--r-- 2 boinc boinc     15845 Mar  6 06:27 start_atlas.sh
[2026-03-06 12:08:38] -rw-r--r-- 2 boinc boinc    597939 Mar  6 06:27 input.tar.gz
[2026-03-06 12:08:38] -rw------- 1 boinc boinc 207176331 Mar  6 12:07 HITS.pool.root.1
[2026-03-06 12:08:38] -rw------- 1 boinc boinc   3307520 Mar  6 12:08 result.tar.gz
12:08:40 (1866033): run_atlas exited; CPU time 39074.665702
12:08:40 (1866033): called boinc_finish(0)

</stderr_txt>
]]>

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