Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:11:23 (2860201): wrapper (7.7.26015): starting
06:11:23 (2860201): wrapper: running run_atlas (--nthreads 4)
[2026-03-06 06:11:23] Arguments: --nthreads 4
[2026-03-06 06:11:23] Threads: 4
[2026-03-06 06:11:23] Checking for CVMFS
[2026-03-06 06:11:23] No cvmfs_config command found, will try listing directly
[2026-03-06 06:11:23] CVMFS is ok
[2026-03-06 06:11:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 06:11:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 06:11:23] Further information can be found at the LHC@home message board.
[2026-03-06 06:11:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 06:11:23] Checking for apptainer binary...
[2026-03-06 06:11:23] which: no apptainer in ((null))
[2026-03-06 06:11:23] apptainer is not installed, using version from CVMFS
[2026-03-06 06:11:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 06:11:24] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot160/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-06 06:11:24] apptainer works
[2026-03-06 06:11:24] Set ATHENA_PROC_NUMBER=4
[2026-03-06 06:11:24] Set ATHENA_CORE_NUMBER=4
[2026-03-06 06:11:24] Starting ATLAS job with PandaID=7038815007
[2026-03-06 06:11:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot160/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 07:26:49]  *** The last 200 lines of the pilot log: ***
[2026-03-06 07:26:49]  protocol_id=None
[2026-03-06 07:26:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-06 07:26:49]  replicas=None
[2026-03-06 07:26:49]  scope=mc23_13p6TeV
[2026-03-06 07:26:49]  status=None
[2026-03-06 07:26:49]  status_code=0
[2026-03-06 07:26:49]  storage_token=
[2026-03-06 07:26:49]  surl=/var/lib/boinc/var/slot160/slots/0/PanDA_Pilot-7038815007/log.48955006._012553.job.log.tgz.1
[2026-03-06 07:26:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f0/91/log.48955006._012553.job.log.tgz.1
[2026-03-06 07:26:49]  workdir=None
[2026-03-06 07:26:49] ]
[2026-03-06 07:26:49] 2026-03-06 06:25:37,888 | INFO     | transferring file log.48955006._012553.job.log.tgz.1 from /var/lib/boinc/var/slot160/slots/0/PanDA_Pilot-7038815007/log.48955006._012553.job.log.tgz.1 to /var/lib/
[2026-03-06 07:26:49] 2026-03-06 06:25:37,888 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot160/slots/0/PanDA_Pilot-7038815007/log.48955006._012553.job.log.tgz.1 /var/lib/boinc/var/slot160/slots/0/
[2026-03-06 07:26:49] 2026-03-06 06:25:37,905 | INFO     | adding to output.list: log.48955006._012553.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f0/91/log.48955006._012553.job.log.tg
[2026-03-06 07:26:49] 2026-03-06 06:25:37,905 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-06 07:26:49] 2026-03-06 06:25:37,905 | INFO     | summary of transferred files:
[2026-03-06 07:26:49] 2026-03-06 06:25:37,905 | INFO     |  -- lfn=log.48955006._012553.job.log.tgz.1, status_code=0, status=transferred
[2026-03-06 07:26:49] 2026-03-06 06:25:37,905 | INFO     | stage-out finished correctly
[2026-03-06 07:26:49] 2026-03-06 06:25:38,293 | INFO     | time since job start (4443s) is within the limit (349056.0s)
[2026-03-06 07:26:49] 2026-03-06 06:25:38,294 | INFO     | 4447s have passed since pilot start - server update state is 'RUNNING'
[2026-03-06 07:26:49] 2026-03-06 06:25:38,362 | WARNING  | process 2870920 can no longer be monitored (due to stat problems) - aborting
[2026-03-06 07:26:49] 2026-03-06 06:25:38,362 | INFO     | using path: /var/lib/boinc/var/slot160/slots/0/PanDA_Pilot-7038815007/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 07:26:49] 2026-03-06 06:25:38,771 | INFO     | number of running child processes to parent process 2870920: 1
[2026-03-06 07:26:49] 2026-03-06 06:25:38,771 | INFO     | maximum number of monitored processes: 6
[2026-03-06 07:26:49] 2026-03-06 06:25:38,885 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-06 07:26:49] 2026-03-06 06:25:40,299 | INFO     | time since job start (4445s) is within the limit (349056.0s)
[2026-03-06 07:26:49] 2026-03-06 06:25:40,826 | INFO     | job 7038815007 has state=finished
[2026-03-06 07:26:49] 2026-03-06 06:25:40,826 | INFO     | preparing for final server update for job 7038815007 in state='finished'
[2026-03-06 07:26:49] 2026-03-06 06:25:40,827 | INFO     | reading metadata from: /var/lib/boinc/var/slot160/slots/0/PanDA_Pilot-7038815007/jobReport.json
[2026-03-06 07:26:49] 2026-03-06 06:25:40,829 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot160/slots/0/workernode_map.json
[2026-03-06 07:26:49] 2026-03-06 06:25:40,829 | INFO     | this job has now completed (state=finished)
[2026-03-06 07:26:49] 2026-03-06 06:25:40,829 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-06 07:26:49] 2026-03-06 06:25:40,829 | INFO     | log transfer has been attempted: DONE
[2026-03-06 07:26:49] 2026-03-06 06:25:40,829 | INFO     | job 7038815007 has finished - writing final server update
[2026-03-06 07:26:49] 2026-03-06 06:25:40,829 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_18714/.job.ad'
[2026-03-06 07:26:49] 2026-03-06 06:25:40,829 | INFO     | total number of processed events: 400 (read)
[2026-03-06 07:26:49] 2026-03-06 06:25:40,848 | INFO     | using path: /var/lib/boinc/var/slot160/slots/0/PanDA_Pilot-7038815007/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 07:26:49] 2026-03-06 06:25:40,848 | INFO     | extracted standard info from prmon json
[2026-03-06 07:26:49] 2026-03-06 06:25:40,849 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 07:26:49] 2026-03-06 06:25:40,849 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 07:26:49] 2026-03-06 06:25:40,849 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 07:26:49] 2026-03-06 06:25:40,849 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 07:26:49] 2026-03-06 06:25:40,850 | INFO     | fitting pss+swap vs Time
[2026-03-06 07:26:49] 2026-03-06 06:25:40,850 | INFO     | sum of square deviations: 89127252.5
[2026-03-06 07:26:49] 2026-03-06 06:25:40,850 | INFO     | sum of deviations: 713815930.5
[2026-03-06 07:26:49] 2026-03-06 06:25:40,851 | INFO     | mean x: 1772776202.5
[2026-03-06 07:26:49] 2026-03-06 06:25:40,851 | INFO     | mean y: 2318848.6515151514
[2026-03-06 07:26:49] 2026-03-06 06:25:40,851 | INFO     | intersect: -14195761525.875837
[2026-03-06 07:26:49] 2026-03-06 06:25:40,851 | INFO     | chi2: 0.00011905342171021704
[2026-03-06 07:26:49] 2026-03-06 06:25:40,851 | INFO     | current memory leak: 8.01 B/s (using 66 data points, chi2=0.00)
[2026-03-06 07:26:49] 2026-03-06 06:25:40,851 | INFO     | could have reported an average CPU frequency of 3630 MHz (6 samples)
[2026-03-06 07:26:49] 2026-03-06 06:25:40,851 | INFO     | ..............................
[2026-03-06 07:26:49] 2026-03-06 06:25:40,851 | INFO     | . Timing measurements:
[2026-03-06 07:26:49] 2026-03-06 06:25:40,851 | INFO     | . get job = 0 s
[2026-03-06 07:26:49] 2026-03-06 06:25:40,851 | INFO     | . initial setup = 4 s
[2026-03-06 07:26:49] 2026-03-06 06:25:40,851 | INFO     | . payload setup = 4 s
[2026-03-06 07:26:49] 2026-03-06 06:25:40,851 | INFO     | . stage-in = 0 s
[2026-03-06 07:26:49] 2026-03-06 06:25:40,851 | INFO     | . payload execution = 4421 s
[2026-03-06 07:26:49] 2026-03-06 06:25:40,851 | INFO     | . stage-out = 0 s
[2026-03-06 07:26:49] 2026-03-06 06:25:40,851 | INFO     | . log creation = 0 s
[2026-03-06 07:26:49] 2026-03-06 06:25:40,851 | INFO     | ..............................
[2026-03-06 07:26:49] 2026-03-06 06:25:41,180 | INFO     | 
[2026-03-06 07:26:49] 2026-03-06 06:25:41,181 | INFO     | job summary report
[2026-03-06 07:26:49] 2026-03-06 06:25:41,181 | INFO     | --------------------------------------------------
[2026-03-06 07:26:49] 2026-03-06 06:25:41,181 | INFO     | PanDA job id: 7038815007
[2026-03-06 07:26:49] 2026-03-06 06:25:41,181 | INFO     | task id: 48955006
[2026-03-06 07:26:49] 2026-03-06 06:25:41,181 | INFO     | errors: (none)
[2026-03-06 07:26:49] 2026-03-06 06:25:41,181 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 07:26:49] 2026-03-06 06:25:41,181 | INFO     | pilot state: finished 
[2026-03-06 07:26:49] 2026-03-06 06:25:41,181 | INFO     | transexitcode: 0
[2026-03-06 07:26:49] 2026-03-06 06:25:41,181 | INFO     | exeerrorcode: 0
[2026-03-06 07:26:49] 2026-03-06 06:25:41,181 | INFO     | exeerrordiag: 
[2026-03-06 07:26:49] 2026-03-06 06:25:41,181 | INFO     | exitcode: 0
[2026-03-06 07:26:49] 2026-03-06 06:25:41,181 | INFO     | exitmsg: OK
[2026-03-06 07:26:49] 2026-03-06 06:25:41,181 | INFO     | cpuconsumptiontime: 16905 s
[2026-03-06 07:26:49] 2026-03-06 06:25:41,181 | INFO     | nevents: 400
[2026-03-06 07:26:49] 2026-03-06 06:25:41,181 | INFO     | neventsw: 0
[2026-03-06 07:26:49] 2026-03-06 06:25:41,181 | INFO     | pid: 2870920
[2026-03-06 07:26:49] 2026-03-06 06:25:41,181 | INFO     | pgrp: 2870920
[2026-03-06 07:26:49] 2026-03-06 06:25:41,181 | INFO     | corecount: 4
[2026-03-06 07:26:49] 2026-03-06 06:25:41,181 | INFO     | event service: False
[2026-03-06 07:26:49] 2026-03-06 06:25:41,181 | INFO     | sizes: {0: 2295813, 10: 2295813, 4430: 2321985, 4432: 2331007, 4433: 2331063, 4435: 2331257}
[2026-03-06 07:26:49] 2026-03-06 06:25:41,181 | INFO     | --------------------------------------------------
[2026-03-06 07:26:49] 2026-03-06 06:25:41,181 | INFO     | 
[2026-03-06 07:26:49] 2026-03-06 06:25:41,181 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot160/slots/0
[2026-03-06 07:26:49] 2026-03-06 06:25:41,200 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 07:26:49] 2026-03-06 06:25:41,200 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 07:26:49] 2026-03-06 06:25:41,200 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 07:26:49] 2026-03-06 06:25:41,200 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 07:26:49] 2026-03-06 06:25:41,200 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 07:26:49] 2026-03-06 06:25:41,200 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 07:26:49] 2026-03-06 06:25:41,200 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 07:26:49] 2026-03-06 06:25:41,200 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 07:26:49] 2026-03-06 06:25:41,200 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 07:26:49] 2026-03-06 06:25:41,200 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 07:26:49] 2026-03-06 06:25:41,200 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 07:26:49] 2026-03-06 06:25:41,200 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 07:26:49] 2026-03-06 06:25:41,200 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 07:26:49] 2026-03-06 06:25:41,200 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 07:26:49] 2026-03-06 06:25:41,200 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 07:26:49] 2026-03-06 06:25:41,201 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 07:26:49] 2026-03-06 06:25:41,201 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 07:26:49] 2026-03-06 06:25:41,201 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 07:26:49] 2026-03-06 06:25:41,201 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 07:26:49] 2026-03-06 06:25:41,201 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 07:26:49] 2026-03-06 06:25:41,201 | INFO     | job 7038815007 has completed (purged errors)
[2026-03-06 07:26:49] 2026-03-06 06:25:41,201 | INFO     | overall cleanup function is called
[2026-03-06 07:26:49] 2026-03-06 06:25:42,208 | INFO     | --- collectZombieJob: --- 10, [2870920]
[2026-03-06 07:26:49] 2026-03-06 06:25:42,208 | INFO     | zombie collector waiting for pid 2870920
[2026-03-06 07:26:49] 2026-03-06 06:25:42,208 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 07:26:49] 2026-03-06 06:25:42,208 | INFO     | collected zombie processes
[2026-03-06 07:26:49] 2026-03-06 06:25:42,208 | INFO     | will attempt to kill all subprocesses of pid=2870920
[2026-03-06 07:26:49] 2026-03-06 06:25:42,646 | INFO     | process IDs to be killed: [2870920] (in reverse order)
[2026-03-06 07:26:49] 2026-03-06 06:25:42,855 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 07:26:49] 2026-03-06 06:25:42,856 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 07:26:49] 2026-03-06 06:25:42,882 | INFO     | did not find any defunct processes belonging to 2870920
[2026-03-06 07:26:49] 2026-03-06 06:25:42,908 | INFO     | did not find any defunct processes belonging to 2870920
[2026-03-06 07:26:49] 2026-03-06 06:25:42,909 | INFO     | ready for new job
[2026-03-06 07:26:49] 2026-03-06 06:25:42,909 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 07:26:49] 2026-03-06 06:25:42,910 | INFO     | **************************************
[2026-03-06 07:26:49] 2026-03-06 06:25:42,910 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 07:26:49] 2026-03-06 06:25:42,910 | INFO     | **************************************
[2026-03-06 07:26:49] 2026-03-06 06:25:42,910 | INFO     | 
[2026-03-06 07:26:49] 2026-03-06 06:25:42,916 | INFO     | architecture information:
[2026-03-06 07:26:49] 2026-03-06 06:25:42,917 | INFO     | executing command: cat /etc/os-release
[2026-03-06 07:26:49] 2026-03-06 06:25:42,931 | INFO     | cat /etc/os-release:
[2026-03-06 07:26:49] NAME="CentOS Linux"
[2026-03-06 07:26:49] VERSION="7 (Core)"
[2026-03-06 07:26:49] ID="centos"
[2026-03-06 07:26:49] ID_LIKE="rhel fedora"
[2026-03-06 07:26:49] VERSION_ID="7"
[2026-03-06 07:26:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 07:26:49] ANSI_COLOR="0;31"
[2026-03-06 07:26:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 07:26:49] HOME_URL="https://www.centos.org/"
[2026-03-06 07:26:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 07:26:49] 
[2026-03-06 07:26:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 07:26:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 07:26:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 07:26:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 07:26:49] 
[2026-03-06 07:26:49] 2026-03-06 06:25:42,931 | INFO     | **************************************
[2026-03-06 07:26:49] 2026-03-06 06:25:43,434 | INFO     | executing command: df -mP /var/lib/boinc/var/slot160/slots/0
[2026-03-06 07:26:49] 2026-03-06 06:25:43,448 | INFO     | sufficient remaining disk space (20008927232 B)
[2026-03-06 07:26:49] 2026-03-06 06:25:43,449 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 07:26:49] 2026-03-06 06:25:43,449 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 07:26:49] 2026-03-06 06:25:43,449 | INFO     | update_server=False
[2026-03-06 07:26:49] 2026-03-06 06:25:43,449 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 07:26:49] 2026-03-06 06:25:43,459 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 07:26:49] 2026-03-06 06:25:43,781 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-06 07:26:49] 2026-03-06 06:25:43,781 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-06 07:26:49] 2026-03-06 06:25:43,781 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 07:26:49] 2026-03-06 06:25:43,781 | INFO     | will abort loop
[2026-03-06 07:26:49] 2026-03-06 06:25:43,844 | INFO     | all data control threads have been joined
[2026-03-06 07:26:49] 2026-03-06 06:25:43,975 | INFO     | all job control threads have been joined
[2026-03-06 07:26:49] 2026-03-06 06:25:44,101 | INFO     | all payload control threads have been joined
[2026-03-06 07:26:49] 2026-03-06 06:25:44,454 | INFO     | [job] retrieve thread has finished
[2026-03-06 07:26:49] 2026-03-06 06:25:44,785 | INFO     | [job] job monitor thread has finished
[2026-03-06 07:26:49] 2026-03-06 06:25:44,834 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 07:26:49] 2026-03-06 06:25:44,848 | INFO     | [data] control thread has finished
[2026-03-06 07:26:49] 2026-03-06 06:25:44,943 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 07:26:49] 2026-03-06 06:25:44,980 | INFO     | [job] control thread has finished
[2026-03-06 07:26:49] 2026-03-06 06:25:45,105 | INFO     | [job] validate thread has finished
[2026-03-06 07:26:49] 2026-03-06 06:25:45,106 | INFO     | [payload] control thread has finished
[2026-03-06 07:26:49] 2026-03-06 06:25:45,347 | INFO     | [payload] validate_post thread has finished
[2026-03-06 07:26:49] 2026-03-06 06:25:45,419 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 07:26:49] 2026-03-06 06:25:45,464 | INFO     | [data] copytool_out thread has finished
[2026-03-06 07:26:49] 2026-03-06 06:25:45,489 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 07:26:49] 2026-03-06 06:25:45,609 | INFO     | [data] copytool_in thread has finished
[2026-03-06 07:26:49] 2026-03-06 06:25:45,914 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 07:26:49] 2026-03-06 06:25:45,949 | INFO     | [payload] failed_post thread has finished
[2026-03-06 07:26:49] 2026-03-06 06:25:46,919 | INFO     | [job] queue monitor thread has finished
[2026-03-06 07:26:49] 2026-03-06 06:25:48,948 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 07:26:49] 2026-03-06 06:25:54,012 | INFO     | job.realtimelogging is not enabled
[2026-03-06 07:26:49] 2026-03-06 06:25:55,017 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 07:26:49] 2026-03-06 06:26:13,844 | INFO     | PID=2864733 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 07:26:49] 2026-03-06 06:26:13,847 | INFO     | .. there are 47 such processes running
[2026-03-06 07:26:49] 2026-03-06 06:26:13,847 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 07:26:49] 2026-03-06 06:26:13,847 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 07:26:49] 2026-03-06 06:26:13,847 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 07:26:49] 2026-03-06 06:26:30,291 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-03-06 07:26:49] 2026-03-06 06:26:42,536 | INFO     | [monitor] cgroup control has ended
[2026-03-06 07:26:49] 2026-03-06 06:26:43,924 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23196232488768)>', '<ExcThread(monitor, started 23195993515776)>']
[2026-03-06 07:26:49] 2026-03-06 06:26:43,985 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 07:26:49] 2026-03-06 06:26:43,986 | INFO     | [monitor] control thread has ended
[2026-03-06 07:26:49] 2026-03-06 06:26:48,948 | INFO     | all workflow threads have been joined
[2026-03-06 07:26:49] 2026-03-06 06:26:48,949 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 07:26:49] 2026-03-06 06:26:48,949 | INFO     | traces error code: 0
[2026-03-06 07:26:49] 2026-03-06 06:26:48,949 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 07:26:49] 2026-03-06 06:26:49,123 [wrapper] ==== pilot stdout END ====
[2026-03-06 07:26:49] 2026-03-06 06:26:49,126 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 07:26:49] 2026-03-06 06:26:49,128 [wrapper] pilotpid: 2864733
[2026-03-06 07:26:49] 2026-03-06 06:26:49,129 [wrapper] Pilot exit status: 0
[2026-03-06 07:26:49] 2026-03-06 06:26:49,137 [wrapper] pandaids: 7038815007
[2026-03-06 07:26:49] 2026-03-06 06:26:49,251 [wrapper] cleanup supervisor_pilot 3630375 2864734
[2026-03-06 07:26:49] 2026-03-06 06:26:49,254 [wrapper] Test setup, not cleaning
[2026-03-06 07:26:49] 2026-03-06 06:26:49,256 [wrapper] apfmon messages muted
[2026-03-06 07:26:49] 2026-03-06 06:26:49,258 [wrapper] ==== wrapper stdout END ====
[2026-03-06 07:26:49] 2026-03-06 06:26:49,260 [wrapper] ==== wrapper stderr END ====
[2026-03-06 07:26:49]  *** Error codes and diagnostics ***
[2026-03-06 07:26:49]     "exeErrorCode": 0,
[2026-03-06 07:26:49]     "exeErrorDiag": "",
[2026-03-06 07:26:49]     "pilotErrorCode": 0,
[2026-03-06 07:26:49]     "pilotErrorDiag": "",
[2026-03-06 07:26:49]  *** Listing of results directory ***
[2026-03-06 07:26:49] total 612172
[2026-03-06 07:26:49] -rw-r--r--. 1 boinc boinc    584627 Mar  5 23:39 pilot3.tar.gz
[2026-03-06 07:26:49] -rwx------. 1 boinc boinc     36322 Mar  5 23:39 runpilot2-wrapper.sh
[2026-03-06 07:26:49] -rw-r--r--. 1 boinc boinc      5111 Mar  5 23:39 queuedata.json
[2026-03-06 07:26:49] -rw-r--r--. 1 boinc boinc       100 Mar  6 06:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 07:26:49] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 06:11 run_atlas
[2026-03-06 07:26:49] -rw-r--r--. 1 boinc boinc       105 Mar  6 06:11 job.xml
[2026-03-06 07:26:49] -rw-r--r--. 2 boinc boinc 437863673 Mar  6 06:11 EVNT.46701403._000252.pool.root.1
[2026-03-06 07:26:49] -rw-r--r--. 2 boinc boinc     15845 Mar  6 06:11 start_atlas.sh
[2026-03-06 07:26:49] drwxrwx--x. 2 boinc boinc      4096 Mar  6 06:11 shared
[2026-03-06 07:26:49] -rw-r--r--. 2 boinc boinc    597959 Mar  6 06:11 input.tar.gz
[2026-03-06 07:26:49] -rw-r--r--. 1 boinc boinc      6706 Mar  6 06:11 init_data.xml
[2026-03-06 07:26:49] -rw-r--r--. 1 boinc boinc         0 Mar  6 06:11 boinc_lockfile
[2026-03-06 07:26:49] -rw-r--r--. 1 boinc boinc      2562 Mar  6 06:11 pandaJob.out
[2026-03-06 07:26:49] -rw-------. 1 boinc boinc    998552 Mar  6 06:11 agis_schedconf.cvmfs.json
[2026-03-06 07:26:49] -rw-------. 1 boinc boinc   1521291 Mar  6 06:11 agis_ddmendpoints.agis.ALL.json
[2026-03-06 07:26:49] -rw-------. 1 boinc boinc       445 Mar  6 06:11 workernode_map.json
[2026-03-06 07:26:49] drwx------. 5 boinc boinc      4096 Mar  6 06:11 pilot3
[2026-03-06 07:26:49] -rw-------. 1 boinc boinc 183234161 Mar  6 07:25 HITS.48955006._012553.pool.root.1
[2026-03-06 07:26:49] -rw-------. 1 boinc boinc        95 Mar  6 07:25 pilot_heartbeat.json
[2026-03-06 07:26:49] -rw-r--r--. 1 boinc boinc       530 Mar  6 07:25 boinc_task_state.xml
[2026-03-06 07:26:49] -rw-------. 1 boinc boinc      1031 Mar  6 07:25 memory_monitor_summary.json
[2026-03-06 07:26:49] -rw-------. 1 boinc boinc    251147 Mar  6 07:25 log.48955006._012553.job.log.tgz.1
[2026-03-06 07:26:49] -rw-------. 1 boinc boinc      6354 Mar  6 07:25 heartbeat.json
[2026-03-06 07:26:49] -rw-r--r--. 1 boinc boinc      8192 Mar  6 07:26 boinc_mmap_file
[2026-03-06 07:26:49] -rw-r--r--. 1 boinc boinc        27 Mar  6 07:26 wrapper_checkpoint.txt
[2026-03-06 07:26:49] -rw-------. 1 boinc boinc      5088 Mar  6 07:26 pilotlog.txt
[2026-03-06 07:26:49] -rw-------. 1 boinc boinc    659825 Mar  6 07:26 log.48955006._012553.job.log.1
[2026-03-06 07:26:49] -rw-------. 1 boinc boinc       357 Mar  6 07:26 output.list
[2026-03-06 07:26:49] -rw-r--r--. 1 boinc boinc       620 Mar  6 07:26 runtime_log
[2026-03-06 07:26:49] -rw-------. 1 boinc boinc    931840 Mar  6 07:26 result.tar.gz
[2026-03-06 07:26:49] -rw-r--r--. 1 boinc boinc      9221 Mar  6 07:26 runtime_log.err
[2026-03-06 07:26:49] -rw-------. 1 boinc boinc       662 Mar  6 07:26 Ur6KDmrWWI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmgHPLDmjVseam.diag
[2026-03-06 07:26:49] -rw-r--r--. 1 boinc boinc     21656 Mar  6 07:26 stderr.txt
[2026-03-06 07:26:49] HITS file was successfully produced:
[2026-03-06 07:26:49] -rw-------. 1 boinc boinc 183234161 Mar  6 07:25 shared/HITS.pool.root.1
[2026-03-06 07:26:49]  *** Contents of shared directory: ***
[2026-03-06 07:26:49] total 608064
[2026-03-06 07:26:49] -rw-r--r--. 2 boinc boinc 437863673 Mar  6 06:11 ATLAS.root_0
[2026-03-06 07:26:49] -rw-r--r--. 2 boinc boinc     15845 Mar  6 06:11 start_atlas.sh
[2026-03-06 07:26:49] -rw-r--r--. 2 boinc boinc    597959 Mar  6 06:11 input.tar.gz
[2026-03-06 07:26:49] -rw-------. 1 boinc boinc 183234161 Mar  6 07:25 HITS.pool.root.1
[2026-03-06 07:26:49] -rw-------. 1 boinc boinc    931840 Mar  6 07:26 result.tar.gz
07:26:50 (2860201): run_atlas exited; CPU time 17071.451996
07:26:50 (2860201): called boinc_finish(0)

</stderr_txt>
]]>

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