Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-06 13:45:59 (29428): vboxwrapper version 26210
2026-03-06 13:45:59 (29428): BOINC client version: 8.2.8
2026-03-06 13:46:00 (29428): Detected: VirtualBox VboxManage Interface (Version: 7.0.10)
2026-03-06 13:46:00 (29428): Successfully copied 'init_data.xml' to the shared directory.
2026-03-06 13:46:00 (29428): Create VM. (boinc_e31c7c3e1e22776e, slot#0)
2026-03-06 13:46:01 (29428): Setting Memory Size for VM. (4800MB)
2026-03-06 13:46:01 (29428): Setting CPU Count for VM. (8)
2026-03-06 13:46:01 (29428): Setting Chipset Options for VM.
2026-03-06 13:46:02 (29428): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-06 13:46:02 (29428): Setting Boot Options for VM.
2026-03-06 13:46:02 (29428): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-06 13:46:03 (29428): Enabling VM Network Access.
2026-03-06 13:46:03 (29428): Disabling USB Support for VM.
2026-03-06 13:46:03 (29428): Disabling COM Port Support for VM.
2026-03-06 13:46:04 (29428): Disabling LPT Port Support for VM.
2026-03-06 13:46:04 (29428): Disabling Audio Support for VM.
2026-03-06 13:46:04 (29428): Disabling Clipboard Support for VM.
2026-03-06 13:46:04 (29428): Disabling Drag and Drop Support for VM.
2026-03-06 13:46:05 (29428): Adding storage controller(s) to VM.
2026-03-06 13:46:05 (29428): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-06 13:46:05 (29428): Adding VirtualBox Guest Additions to VM.
2026-03-06 13:46:06 (29428): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-06 13:46:06 (29428): forwarding host port 58036 to guest port 80
2026-03-06 13:46:06 (29428): Enabling remote desktop for VM.
2026-03-06 13:46:06 (29428): Required extension pack not installed, remote desktop not enabled.
2026-03-06 13:46:06 (29428): Enabling shared directory for VM.
2026-03-06 13:46:07 (29428): Starting VM using VBoxManage interface. (boinc_e31c7c3e1e22776e, slot#0)
2026-03-06 13:46:15 (29428): Successfully started VM. (PID = '20228')
2026-03-06 13:46:15 (29428): Reporting VM Process ID to BOINC.
2026-03-06 13:46:15 (29428): Guest Log: BIOS: VirtualBox 7.0.10
2026-03-06 13:46:15 (29428): Guest Log: CPUID EDX: 0x178bfbff
2026-03-06 13:46:15 (29428): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-06 13:46:15 (29428): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-06 13:46:15 (29428): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-06 13:46:15 (29428): Detected: Web Application Enabled (http://localhost:58036)
2026-03-06 13:46:15 (29428): Preference change detected
2026-03-06 13:46:15 (29428): Setting CPU throttle for VM. (100%)
2026-03-06 13:46:16 (29428): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-06 13:46:17 (29428): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-06 13:46:17 (29428): Guest Log: BIOS: Booting from Hard Disk...
2026-03-06 13:46:20 (29428): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-06 13:46:20 (29428): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-06 13:46:20 (29428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-06 13:46:29 (29428): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-06 13:46:29 (29428): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-06 13:46:39 (29428): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-06 13:46:39 (29428): Guest Log: 00:00:00.000231 main     Log opened 2026-03-06T13:46:37.442029000Z
2026-03-06 13:46:39 (29428): Guest Log: 00:00:00.000393 main     OS Product: Linux
2026-03-06 13:46:39 (29428): Guest Log: 00:00:00.000455 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-06 13:46:39 (29428): Guest Log: 00:00:00.000513 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-06 13:46:39 (29428): Guest Log: 00:00:00.000571 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-06 13:46:39 (29428): Guest Log: 00:00:00.000573 main     Process ID: 1376
2026-03-06 13:46:39 (29428): Guest Log: 00:00:00.000574 main     Package type: LINUX_64BITS_GENERIC
2026-03-06 13:46:39 (29428): Guest Log: 00:00:00.002370 main     5.2.32 r132073 started. Verbose level = 0
2026-03-06 13:46:39 (29428): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-06 13:46:39 (29428): Guest Log: [INFO] Mounting shared directory
2026-03-06 13:46:39 (29428): Guest Log: [INFO] Checking for init_data.xml
2026-03-06 13:46:47 (29428): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-06 13:46:47 (29428): Guest Log: [INFO] Detected branch: prod
2026-03-06 13:46:47 (29428): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-06 13:46:47 (29428): Guest Log: Copying input files
2026-03-06 13:46:49 (29428): Guest Log: 00:00:10.006849 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 187 910 683 000ns (GuestNow=1 772 797 609 535 916 000 ns GuestLast=1 772 804 797 446 599 000 ns fSetTimeLastLoop=true )
2026-03-06 13:47:06 (29428): Guest Log: Copied input files into RunAtlas.
2026-03-06 13:47:06 (29428): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-06 13:47:06 (29428): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-06 13:47:06 (29428): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-06 13:47:06 (29428): Guest Log: Further information can be found at the LHC@home message board.
2026-03-06 13:47:20 (29428): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-06 13:47:20 (29428): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-06 13:47:20 (29428): Guest Log: 2.6.3.0 1653 0 30192 156955 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-06 13:47:23 (29428): Guest Log: copied the webapp to /var/www
2026-03-06 13:47:23 (29428): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-06 13:47:23 (29428): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-06 13:47:23 (29428): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-06 13:47:23 (29428): Guest Log:  *** Starting ATLAS job. (PandaID=7038815093 taskID=48955006) ***
2026-03-06 15:26:24 (29428): Status Report: Elapsed Time: '6000.000000'
2026-03-06 15:26:24 (29428): Status Report: CPU Time: '42322.515625'
2026-03-06 17:06:32 (29428): Status Report: Elapsed Time: '12000.000000'
2026-03-06 17:06:32 (29428): Status Report: CPU Time: '88882.484375'
2026-03-06 17:34:49 (29428): Guest Log:  *** Job finished ***
2026-03-06 17:34:49 (29428): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-06 17:34:49 (29428): Guest Log: 2026-03-06 15:34:30,920 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-06 17:34:49 (29428): Guest Log: 2026-03-06 15:34:30,920 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-06 17:34:49 (29428): Guest Log: 2026-03-06 15:34:42,623 | INFO     | [monitor] cgroup control has ended
2026-03-06 17:34:49 (29428): Guest Log: 2026-03-06 15:34:43,575 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139737892792128)>', '<ExcThread(monitor, started 139737591424768)>']
2026-03-06 17:34:49 (29428): Guest Log: 2026-03-06 15:34:44,163 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-06 17:34:49 (29428): Guest Log: 2026-03-06 15:34:44,164 | INFO     | [monitor] control thread has ended
2026-03-06 17:34:49 (29428): Guest Log: 2026-03-06 15:34:48,582 | INFO     | all workflow threads have been joined
2026-03-06 17:34:49 (29428): Guest Log: 2026-03-06 15:34:48,582 | INFO     | end of generic workflow (traces error code: 0)
2026-03-06 17:34:49 (29428): Guest Log: 2026-03-06 15:34:48,582 | INFO     | traces error code: 0
2026-03-06 17:34:49 (29428): Guest Log: 2026-03-06 15:34:48,582 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-06 17:34:49 (29428): Guest Log: 2026-03-06 15:34:48,718 [wrapper] ==== pilot stdout END ====
2026-03-06 17:34:49 (29428): Guest Log: 2026-03-06 15:34:48,727 [wrapper] ==== wrapper stdout RESUME ====
2026-03-06 17:34:49 (29428): Guest Log: 2026-03-06 15:34:48,737 [wrapper] pilotpid: 6105
2026-03-06 17:34:49 (29428): Guest Log: 2026-03-06 15:34:48,747 [wrapper] Pilot exit status: 0
2026-03-06 17:34:49 (29428): Guest Log: 2026-03-06 15:34:48,800 [wrapper] pandaids: 7038815093
2026-03-06 17:34:49 (29428): Guest Log: 2026-03-06 15:34:48,854 [wrapper] cleanup supervisor_pilot 28096 6106
2026-03-06 17:34:49 (29428): Guest Log: 2026-03-06 15:34:48,864 [wrapper] Test setup, not cleaning
2026-03-06 17:34:49 (29428): Guest Log: 2026-03-06 15:34:48,881 [wrapper] apfmon messages muted
2026-03-06 17:34:49 (29428): Guest Log: 2026-03-06 15:34:48,889 [wrapper] ==== wrapper stdout END ====
2026-03-06 17:34:49 (29428): Guest Log: 2026-03-06 15:34:48,899 [wrapper] ==== wrapper stderr END ====
2026-03-06 17:34:49 (29428): Guest Log:  *** Error codes and diagnostics ***
2026-03-06 17:34:49 (29428): Guest Log:     "exeErrorCode": 0,
2026-03-06 17:34:49 (29428): Guest Log:     "exeErrorDiag": "",
2026-03-06 17:34:49 (29428): Guest Log:     "pilotErrorCode": 0,
2026-03-06 17:34:49 (29428): Guest Log:     "pilotErrorDiag": "",
2026-03-06 17:34:49 (29428): Guest Log:  *** Listing of results directory ***
2026-03-06 17:34:49 (29428): Guest Log: total 187960
2026-03-06 17:34:49 (29428): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  5 22:39 pilot3.tar.gz
2026-03-06 17:34:49 (29428): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  5 22:39 runpilot2-wrapper.sh
2026-03-06 17:34:49 (29428): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  5 22:39 queuedata.json
2026-03-06 17:34:49 (29428): Guest Log: -rwxr-xr-x. 1 atlas atlas      8260 Mar  6 11:46 init_data.xml
2026-03-06 17:34:49 (29428): Guest Log: -rwxr-xr-x. 1 atlas atlas    597953 Mar  6 11:46 input.tar.gz
2026-03-06 17:34:49 (29428): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  6 11:46 start_atlas.sh
2026-03-06 17:34:49 (29428): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  6 11:47 EVNT.46701403._000253.pool.root.1 -> /data/./ATLAS.root_0
2026-03-06 17:34:49 (29428): Guest Log: -rw-r--r--. 1 atlas atlas      2564 Mar  6 11:47 pandaJob.out
2026-03-06 17:34:49 (29428): Guest Log: -rw-------. 1 atlas atlas    998891 Mar  6 11:48 agis_schedconf.cvmfs.json
2026-03-06 17:34:49 (29428): Guest Log: -rw-------. 1 atlas atlas       445 Mar  6 11:48 workernode_map.json
2026-03-06 17:34:49 (29428): Guest Log: drwx------. 5 atlas atlas      4096 Mar  6 11:48 pilot3
2026-03-06 17:34:49 (29428): Guest Log: -rw-------. 1 atlas atlas 183906564 Mar  6 15:33 HITS.48955006._012638.pool.root.1
2026-03-06 17:34:49 (29428): Guest Log: -rw-------. 1 atlas atlas        95 Mar  6 15:33 pilot_heartbeat.json
2026-03-06 17:34:49 (29428): Guest Log: -rw-------. 1 atlas atlas      1042 Mar  6 15:33 memory_monitor_summary.json
2026-03-06 17:34:49 (29428): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  6 15:33 agis_ddmendpoints.agis.ALL.json
2026-03-06 17:34:49 (29428): Guest Log: -rw-------. 1 atlas atlas    480449 Mar  6 15:33 log.48955006._012638.job.log.tgz.1
2026-03-06 17:34:49 (29428): Guest Log: -rw-------. 1 atlas atlas      6420 Mar  6 15:33 heartbeat.json
2026-03-06 17:34:49 (29428): Guest Log: -rw-------. 1 atlas atlas      4873 Mar  6 15:34 pilotlog.txt
2026-03-06 17:34:49 (29428): Guest Log: -rw-------. 1 atlas atlas   1865054 Mar  6 15:34 log.48955006._012638.job.log.1
2026-03-06 17:34:49 (29428): Guest Log: -rw-------. 1 atlas atlas       357 Mar  6 15:34 output.list
2026-03-06 17:34:49 (29428): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  6 15:34 runtime_log
2026-03-06 17:34:49 (29428): Guest Log: -rw-------. 1 atlas atlas   2365440 Mar  6 15:34 result.tar.gz
2026-03-06 17:34:49 (29428): Guest Log: -rw-------. 1 atlas atlas       661 Mar  6 15:34 rzOMDmtWWI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmTANLDm6plvUo.diag
2026-03-06 17:34:49 (29428): Guest Log: -rw-r--r--. 1 atlas atlas      8758 Mar  6 15:34 runtime_log.err
2026-03-06 17:34:49 (29428): Guest Log: Looking for outputfile HITS.48955006._012638.pool.root.1
2026-03-06 17:34:49 (29428): Guest Log: HITS file was successfully produced
2026-03-06 17:34:49 (29428): Guest Log: -rw-------. 1 atlas atlas 183906564 Mar  6 15:33 /home/atlas/RunAtlas/HITS.48955006._012638.pool.root.1
2026-03-06 17:34:52 (29428): Guest Log: Successfully finished the ATLAS job!
2026-03-06 17:34:52 (29428): Guest Log: Copying the results back to the shared directory!
2026-03-06 17:34:52 (29428): Guest Log:  *** Contents of shared directory: ***
2026-03-06 17:34:52 (29428): Guest Log: total 611552
2026-03-06 17:34:52 (29428): Guest Log: -rwxrwxrwx. 1 root root 439322236 Mar  6 11:45 ATLAS.root_0
2026-03-06 17:34:52 (29428): Guest Log: -rwxrwxrwx. 1 root root 183906564 Mar  6 15:34 HITS.pool.root.1
2026-03-06 17:34:52 (29428): Guest Log: -rwxrwxrwx. 1 root root      8260 Mar  6 11:45 init_data.xml
2026-03-06 17:34:52 (29428): Guest Log: -rwxrwxrwx. 1 root root    597953 Mar  6 02:23 input.tar.gz
2026-03-06 17:34:52 (29428): Guest Log: -rwxrwxrwx. 1 root root   2365440 Mar  6 15:34 result.tar.gz
2026-03-06 17:34:52 (29428): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  6 02:23 start_atlas.sh
2026-03-06 17:34:52 (29428): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-06 17:34:52 (29428): VM Completion File Detected.
2026-03-06 17:34:52 (29428): Powering off VM.
2026-03-06 17:34:53 (29428): Successfully stopped VM.
2026-03-06 17:34:53 (29428): Deregistering VM. (boinc_e31c7c3e1e22776e, slot#0)
2026-03-06 17:34:53 (29428): Removing network bandwidth throttle group from VM.
2026-03-06 17:34:53 (29428): Removing VM from VirtualBox.
2026-03-06 17:34:58 (29428): called boinc_finish(0)

</stderr_txt>
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