Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:08:12 (4179725): wrapper (7.7.26015): starting
17:08:12 (4179725): wrapper: running run_atlas (--nthreads 4)
[2026-03-06 17:08:12] Arguments: --nthreads 4
[2026-03-06 17:08:12] Threads: 4
[2026-03-06 17:08:12] Checking for CVMFS
[2026-03-06 17:08:12] No cvmfs_config command found, will try listing directly
[2026-03-06 17:08:12] CVMFS is ok
[2026-03-06 17:08:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 17:08:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 17:08:12] Further information can be found at the LHC@home message board.
[2026-03-06 17:08:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 17:08:12] Checking for apptainer binary...
[2026-03-06 17:08:12] which: no apptainer in ((null))
[2026-03-06 17:08:12] apptainer is not installed, using version from CVMFS
[2026-03-06 17:08:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 17:08:13] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-03-06 17:08:13] apptainer works
[2026-03-06 17:08:13] Set ATHENA_PROC_NUMBER=4
[2026-03-06 17:08:13] Set ATHENA_CORE_NUMBER=4
[2026-03-06 17:08:13] Starting ATLAS job with PandaID=7038765877
[2026-03-06 17:08:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 20:09:04]  *** The last 200 lines of the pilot log: ***
[2026-03-06 20:09:04] 2026-03-06 19:01:09,581 | INFO     | job 7038765877 has finished - writing final server update
[2026-03-06 20:09:04] 2026-03-06 19:01:09,582 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_38740/.job.ad'
[2026-03-06 20:09:04] 2026-03-06 19:01:09,582 | INFO     | total number of processed events: 400 (read)
[2026-03-06 20:09:04] 2026-03-06 19:01:09,594 | INFO     | using path: /var/lib/boinc/var/slot40/slots/0/PanDA_Pilot-7038765877/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 20:09:04] 2026-03-06 19:01:09,595 | INFO     | extracted standard info from prmon json
[2026-03-06 20:09:04] 2026-03-06 19:01:09,595 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 20:09:04] 2026-03-06 19:01:09,595 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 20:09:04] 2026-03-06 19:01:09,595 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 20:09:04] 2026-03-06 19:01:09,595 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 20:09:04] 2026-03-06 19:01:09,599 | INFO     | fitting pss+swap vs Time
[2026-03-06 20:09:04] 2026-03-06 19:01:09,599 | INFO     | sum of square deviations: 1523386702.5
[2026-03-06 20:09:04] 2026-03-06 19:01:09,600 | INFO     | sum of deviations: 723104675.0
[2026-03-06 20:09:04] 2026-03-06 19:01:09,600 | INFO     | mean x: 1772818490.5
[2026-03-06 20:09:04] 2026-03-06 19:01:09,600 | INFO     | mean y: 2315764.1529411767
[2026-03-06 20:09:04] 2026-03-06 19:01:09,600 | INFO     | intersect: -839186486.262687
[2026-03-06 20:09:04] 2026-03-06 19:01:09,601 | INFO     | chi2: 2.0995311122133122
[2026-03-06 20:09:04] 2026-03-06 19:01:09,601 | INFO     | sum of square deviations: 1392881930.0
[2026-03-06 20:09:04] 2026-03-06 19:01:09,602 | INFO     | sum of deviations: 11247508485.000002
[2026-03-06 20:09:04] 2026-03-06 19:01:09,602 | INFO     | mean x: 1772818338.0
[2026-03-06 20:09:04] 2026-03-06 19:01:09,602 | INFO     | mean y: 2327762.3696969696
[2026-03-06 20:09:04] 2026-03-06 19:01:09,602 | INFO     | intersect: -14313163644.01146
[2026-03-06 20:09:04] 2026-03-06 19:01:09,603 | INFO     | chi2: 1.2862528555772759
[2026-03-06 20:09:04] 2026-03-06 19:01:09,603 | INFO     | current chi2=1.2862528555772759 (change=38.736185041748854 %)
[2026-03-06 20:09:04] 2026-03-06 19:01:09,603 | INFO     | sum of square deviations: 1270051720.0
[2026-03-06 20:09:04] 2026-03-06 19:01:09,604 | INFO     | sum of deviations: 10808224366.0
[2026-03-06 20:09:04] 2026-03-06 19:01:09,604 | INFO     | mean x: 1772818185.5
[2026-03-06 20:09:04] 2026-03-06 19:01:09,604 | INFO     | mean y: 2327216.8125
[2026-03-06 20:09:04] 2026-03-06 19:01:09,604 | INFO     | intersect: -15084473113.656727
[2026-03-06 20:09:04] 2026-03-06 19:01:09,605 | INFO     | chi2: 1.287301030147552
[2026-03-06 20:09:04] 2026-03-06 19:01:09,605 | INFO     | current chi2=1.287301030147552 (change=-0.08149055341111348 %)
[2026-03-06 20:09:04] 2026-03-06 19:01:09,605 | INFO     | right removable region: 159
[2026-03-06 20:09:04] 2026-03-06 19:01:09,605 | INFO     | sum of square deviations: 1392881930.0
[2026-03-06 20:09:04] 2026-03-06 19:01:09,606 | INFO     | sum of deviations: -15328057491.0
[2026-03-06 20:09:04] 2026-03-06 19:01:09,606 | INFO     | mean x: 1772818643.0
[2026-03-06 20:09:04] 2026-03-06 19:01:09,606 | INFO     | mean y: 2334097.5272727273
[2026-03-06 20:09:04] 2026-03-06 19:01:09,606 | INFO     | intersect: 19511429230.25012
[2026-03-06 20:09:04] 2026-03-06 19:01:09,607 | INFO     | chi2: 0.9275446163568961
[2026-03-06 20:09:04] 2026-03-06 19:01:09,607 | INFO     | current chi2=0.9275446163568961 (change=55.821344539205974 %)
[2026-03-06 20:09:04] 2026-03-06 19:01:09,607 | INFO     | sum of square deviations: 1270051720.0
[2026-03-06 20:09:04] 2026-03-06 19:01:09,608 | INFO     | sum of deviations: -8303642720.499999
[2026-03-06 20:09:04] 2026-03-06 19:01:09,608 | INFO     | mean x: 1772818795.5
[2026-03-06 20:09:04] 2026-03-06 19:01:09,608 | INFO     | mean y: 2325413.95625
[2026-03-06 20:09:04] 2026-03-06 19:01:09,608 | INFO     | intersect: 11593076919.744652
[2026-03-06 20:09:04] 2026-03-06 19:01:09,609 | INFO     | chi2: 0.8608124539064396
[2026-03-06 20:09:04] 2026-03-06 19:01:09,609 | INFO     | current chi2=0.8608124539064396 (change=7.194496229470827 %)
[2026-03-06 20:09:04] 2026-03-06 19:01:09,609 | INFO     | left removable region: 20
[2026-03-06 20:09:04] 2026-03-06 19:01:09,609 | INFO     | sum of square deviations: 832722590.0
[2026-03-06 20:09:04] 2026-03-06 19:01:09,610 | INFO     | sum of deviations: 3372768690.0
[2026-03-06 20:09:04] 2026-03-06 19:01:09,610 | INFO     | mean x: 1772818765.0
[2026-03-06 20:09:04] 2026-03-06 19:01:09,610 | INFO     | mean y: 2335721.6043165466
[2026-03-06 20:09:04] 2026-03-06 19:01:09,610 | INFO     | intersect: -7178095907.657078
[2026-03-06 20:09:04] 2026-03-06 19:01:09,610 | INFO     | chi2: 0.0007441525398501884
[2026-03-06 20:09:04] 2026-03-06 19:01:09,611 | INFO     | current memory leak: 4.05 B/s (using 139 data points, chi2=0.00)
[2026-03-06 20:09:04] 2026-03-06 19:01:09,611 | INFO     | could have reported an average CPU frequency of 2599 MHz (9 samples)
[2026-03-06 20:09:04] 2026-03-06 19:01:09,611 | INFO     | ..............................
[2026-03-06 20:09:04] 2026-03-06 19:01:09,611 | INFO     | . Timing measurements:
[2026-03-06 20:09:04] 2026-03-06 19:01:09,611 | INFO     | . get job = 0 s
[2026-03-06 20:09:04] 2026-03-06 19:01:09,611 | INFO     | . initial setup = 6 s
[2026-03-06 20:09:04] 2026-03-06 19:01:09,612 | INFO     | . payload setup = 6 s
[2026-03-06 20:09:04] 2026-03-06 19:01:09,612 | INFO     | . stage-in = 0 s
[2026-03-06 20:09:04] 2026-03-06 19:01:09,612 | INFO     | . payload execution = 10333 s
[2026-03-06 20:09:04] 2026-03-06 19:01:09,612 | INFO     | . stage-out = 1 s
[2026-03-06 20:09:04] 2026-03-06 19:01:09,612 | INFO     | . log creation = 0 s
[2026-03-06 20:09:04] 2026-03-06 19:01:09,612 | INFO     | ..............................
[2026-03-06 20:09:04] 2026-03-06 19:01:09,701 | INFO     | 
[2026-03-06 20:09:04] 2026-03-06 19:01:09,702 | INFO     | job summary report
[2026-03-06 20:09:04] 2026-03-06 19:01:09,702 | INFO     | --------------------------------------------------
[2026-03-06 20:09:04] 2026-03-06 19:01:09,702 | INFO     | PanDA job id: 7038765877
[2026-03-06 20:09:04] 2026-03-06 19:01:09,702 | INFO     | task id: 48955006
[2026-03-06 20:09:04] 2026-03-06 19:01:09,702 | INFO     | errors: (none)
[2026-03-06 20:09:04] 2026-03-06 19:01:09,702 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 20:09:04] 2026-03-06 19:01:09,702 | INFO     | pilot state: finished 
[2026-03-06 20:09:04] 2026-03-06 19:01:09,702 | INFO     | transexitcode: 0
[2026-03-06 20:09:04] 2026-03-06 19:01:09,702 | INFO     | exeerrorcode: 0
[2026-03-06 20:09:04] 2026-03-06 19:01:09,702 | INFO     | exeerrordiag: 
[2026-03-06 20:09:04] 2026-03-06 19:01:09,702 | INFO     | exitcode: 0
[2026-03-06 20:09:04] 2026-03-06 19:01:09,703 | INFO     | exitmsg: OK
[2026-03-06 20:09:04] 2026-03-06 19:01:09,703 | INFO     | cpuconsumptiontime: 38910 s
[2026-03-06 20:09:04] 2026-03-06 19:01:09,703 | INFO     | nevents: 400
[2026-03-06 20:09:04] 2026-03-06 19:01:09,703 | INFO     | neventsw: 0
[2026-03-06 20:09:04] 2026-03-06 19:01:09,703 | INFO     | pid: 4188895
[2026-03-06 20:09:04] 2026-03-06 19:01:09,703 | INFO     | pgrp: 4188895
[2026-03-06 20:09:04] 2026-03-06 19:01:09,703 | INFO     | corecount: 4
[2026-03-06 20:09:04] 2026-03-06 19:01:09,703 | INFO     | event service: False
[2026-03-06 20:09:04] 2026-03-06 19:01:09,703 | INFO     | sizes: {0: 2295381, 1: 2295842, 11: 2295842, 10344: 2324816, 10345: 2333892, 10348: 2334094}
[2026-03-06 20:09:04] 2026-03-06 19:01:09,703 | INFO     | --------------------------------------------------
[2026-03-06 20:09:04] 2026-03-06 19:01:09,703 | INFO     | 
[2026-03-06 20:09:04] 2026-03-06 19:01:09,703 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot40/slots/0
[2026-03-06 20:09:04] 2026-03-06 19:01:09,725 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 20:09:04] 2026-03-06 19:01:09,726 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 20:09:04] 2026-03-06 19:01:09,726 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 20:09:04] 2026-03-06 19:01:09,726 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 20:09:04] 2026-03-06 19:01:09,726 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 20:09:04] 2026-03-06 19:01:09,726 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 20:09:04] 2026-03-06 19:01:09,726 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 20:09:04] 2026-03-06 19:01:09,726 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 20:09:04] 2026-03-06 19:01:09,726 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 20:09:04] 2026-03-06 19:01:09,726 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 20:09:04] 2026-03-06 19:01:09,727 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 20:09:04] 2026-03-06 19:01:09,727 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 20:09:04] 2026-03-06 19:01:09,727 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 20:09:04] 2026-03-06 19:01:09,727 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 20:09:04] 2026-03-06 19:01:09,727 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 20:09:04] 2026-03-06 19:01:09,727 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 20:09:04] 2026-03-06 19:01:09,727 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 20:09:04] 2026-03-06 19:01:09,727 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 20:09:04] 2026-03-06 19:01:09,727 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 20:09:04] 2026-03-06 19:01:09,727 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 20:09:04] 2026-03-06 19:01:09,728 | INFO     | job 7038765877 has completed (purged errors)
[2026-03-06 20:09:04] 2026-03-06 19:01:09,728 | INFO     | overall cleanup function is called
[2026-03-06 20:09:04] 2026-03-06 19:01:10,736 | INFO     | --- collectZombieJob: --- 10, [4188895]
[2026-03-06 20:09:04] 2026-03-06 19:01:10,736 | INFO     | zombie collector waiting for pid 4188895
[2026-03-06 20:09:04] 2026-03-06 19:01:10,736 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 20:09:04] 2026-03-06 19:01:10,736 | INFO     | collected zombie processes
[2026-03-06 20:09:04] 2026-03-06 19:01:10,736 | INFO     | will attempt to kill all subprocesses of pid=4188895
[2026-03-06 20:09:04] 2026-03-06 19:01:11,146 | INFO     | process IDs to be killed: [4188895] (in reverse order)
[2026-03-06 20:09:04] 2026-03-06 19:01:11,277 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 20:09:04] 2026-03-06 19:01:11,277 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 20:09:04] 2026-03-06 19:01:11,290 | INFO     | did not find any defunct processes belonging to 4188895
[2026-03-06 20:09:04] 2026-03-06 19:01:11,302 | INFO     | did not find any defunct processes belonging to 4188895
[2026-03-06 20:09:04] 2026-03-06 19:01:11,302 | INFO     | ready for new job
[2026-03-06 20:09:04] 2026-03-06 19:01:11,302 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 20:09:04] 2026-03-06 19:01:11,304 | INFO     | **************************************
[2026-03-06 20:09:04] 2026-03-06 19:01:11,305 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 20:09:04] 2026-03-06 19:01:11,305 | INFO     | **************************************
[2026-03-06 20:09:04] 2026-03-06 19:01:11,305 | INFO     | 
[2026-03-06 20:09:04] 2026-03-06 19:01:11,308 | INFO     | architecture information:
[2026-03-06 20:09:04] 2026-03-06 19:01:11,309 | INFO     | executing command: cat /etc/os-release
[2026-03-06 20:09:04] 2026-03-06 19:01:11,325 | INFO     | cat /etc/os-release:
[2026-03-06 20:09:04] NAME="CentOS Linux"
[2026-03-06 20:09:04] VERSION="7 (Core)"
[2026-03-06 20:09:04] ID="centos"
[2026-03-06 20:09:04] ID_LIKE="rhel fedora"
[2026-03-06 20:09:04] VERSION_ID="7"
[2026-03-06 20:09:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 20:09:04] ANSI_COLOR="0;31"
[2026-03-06 20:09:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 20:09:04] HOME_URL="https://www.centos.org/"
[2026-03-06 20:09:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 20:09:04] 
[2026-03-06 20:09:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 20:09:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 20:09:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 20:09:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 20:09:04] 
[2026-03-06 20:09:04] 2026-03-06 19:01:11,325 | INFO     | **************************************
[2026-03-06 20:09:04] 2026-03-06 19:01:11,828 | INFO     | executing command: df -mP /var/lib/boinc/var/slot40/slots/0
[2026-03-06 20:09:04] 2026-03-06 19:01:11,846 | INFO     | sufficient remaining disk space (25285361664 B)
[2026-03-06 20:09:04] 2026-03-06 19:01:11,846 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 20:09:04] 2026-03-06 19:01:11,847 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 20:09:04] 2026-03-06 19:01:11,847 | INFO     | update_server=False
[2026-03-06 20:09:04] 2026-03-06 19:01:11,847 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 20:09:04] 2026-03-06 19:01:11,847 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 20:09:04] 2026-03-06 19:01:11,847 | INFO     | aborting loop
[2026-03-06 20:09:04] 2026-03-06 19:01:12,081 | INFO     | all data control threads have been joined
[2026-03-06 20:09:04] 2026-03-06 19:01:12,852 | INFO     | [job] retrieve thread has finished
[2026-03-06 20:09:04] 2026-03-06 19:01:12,853 | INFO     | [job] job monitor thread has finished
[2026-03-06 20:09:04] 2026-03-06 19:01:12,937 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 20:09:04] 2026-03-06 19:01:13,049 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 20:09:04] 2026-03-06 19:01:13,086 | INFO     | [data] control thread has finished
[2026-03-06 20:09:04] 2026-03-06 19:01:13,159 | INFO     | [job] validate thread has finished
[2026-03-06 20:09:04] 2026-03-06 19:01:13,333 | INFO     | all payload control threads have been joined
[2026-03-06 20:09:04] 2026-03-06 19:01:13,536 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 20:09:04] 2026-03-06 19:01:13,546 | INFO     | all job control threads have been joined
[2026-03-06 20:09:04] 2026-03-06 19:01:13,652 | INFO     | [payload] validate_post thread has finished
[2026-03-06 20:09:04] 2026-03-06 19:01:13,759 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 20:09:04] 2026-03-06 19:01:14,073 | INFO     | [payload] failed_post thread has finished
[2026-03-06 20:09:04] 2026-03-06 19:01:14,090 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 20:09:04] 2026-03-06 19:01:14,298 | INFO     | [data] copytool_in thread has finished
[2026-03-06 20:09:04] 2026-03-06 19:01:14,338 | INFO     | [payload] control thread has finished
[2026-03-06 20:09:04] 2026-03-06 19:01:14,551 | INFO     | [job] control thread has finished
[2026-03-06 20:09:04] 2026-03-06 19:01:14,712 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 20:09:04] 2026-03-06 19:01:14,942 | INFO     | [data] copytool_out thread has finished
[2026-03-06 20:09:04] 2026-03-06 19:01:15,717 | INFO     | [job] queue monitor thread has finished
[2026-03-06 20:09:04] 2026-03-06 19:01:17,541 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 20:09:04] 2026-03-06 19:01:22,761 | INFO     | job.realtimelogging is not enabled
[2026-03-06 20:09:04] 2026-03-06 19:01:23,766 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 20:09:04] 2026-03-06 19:01:42,798 | INFO     | PID=4183840 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 20:09:04] 2026-03-06 19:01:42,798 | INFO     | .. there are 12 such processes running
[2026-03-06 20:09:04] 2026-03-06 19:01:42,799 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 20:09:04] 2026-03-06 19:01:42,799 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 20:09:04] 2026-03-06 19:01:42,799 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 20:09:04] 2026-03-06 19:01:47,947 | INFO     | [monitor] cgroup control has ended
[2026-03-06 20:09:04] 2026-03-06 19:01:49,973 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22534549849920)>', '<ExcThread(monitor, started 22534304298752)>']
[2026-03-06 20:09:04] 2026-03-06 19:01:50,835 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 20:09:04] 2026-03-06 19:01:50,835 | INFO     | [monitor] control thread has ended
[2026-03-06 20:09:04] 2026-03-06 19:01:54,998 | INFO     | all workflow threads have been joined
[2026-03-06 20:09:04] 2026-03-06 19:01:54,998 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 20:09:04] 2026-03-06 19:01:54,998 | INFO     | traces error code: 0
[2026-03-06 20:09:04] 2026-03-06 19:01:54,998 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 20:09:04] 2026-03-06 19:01:55,140 [wrapper] ==== pilot stdout END ====
[2026-03-06 20:09:04] 2026-03-06 19:01:55,143 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 20:09:04] 2026-03-06 19:01:55,146 [wrapper] pilotpid: 4183840
[2026-03-06 20:09:04] 2026-03-06 19:01:55,149 [wrapper] Pilot exit status: 0
[2026-03-06 20:09:04] 2026-03-06 19:01:55,162 [wrapper] pandaids: 7038765877
[2026-03-06 20:09:04] 2026-03-06 19:01:55,247 [wrapper] cleanup supervisor_pilot  232389 4183841
[2026-03-06 20:09:04] 2026-03-06 19:01:55,252 [wrapper] Test setup, not cleaning
[2026-03-06 20:09:04] 2026-03-06 19:01:55,255 [wrapper] apfmon messages muted
[2026-03-06 20:09:04] 2026-03-06 19:01:55,258 [wrapper] ==== wrapper stdout END ====
[2026-03-06 20:09:04] 2026-03-06 19:01:55,260 [wrapper] ==== wrapper stderr END ====
[2026-03-06 20:09:04]  *** Error codes and diagnostics ***
[2026-03-06 20:09:04]     "exeErrorCode": 0,
[2026-03-06 20:09:04]     "exeErrorDiag": "",
[2026-03-06 20:09:04]     "pilotErrorCode": 0,
[2026-03-06 20:09:04]     "pilotErrorDiag": "",
[2026-03-06 20:09:04]  *** Listing of results directory ***
[2026-03-06 20:09:04] total 614836
[2026-03-06 20:09:04] -rwx------. 1 boinc boinc     36322 Mar  5 23:39 runpilot2-wrapper.sh
[2026-03-06 20:09:04] -rw-r--r--. 1 boinc boinc    584627 Mar  5 23:39 pilot3.tar.gz
[2026-03-06 20:09:04] -rw-r--r--. 1 boinc boinc      5111 Mar  5 23:39 queuedata.json
[2026-03-06 20:09:04] -rw-r--r--. 1 boinc boinc       100 Mar  6 17:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 20:09:04] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 17:08 run_atlas
[2026-03-06 20:09:04] -rw-r--r--. 1 boinc boinc       105 Mar  6 17:08 job.xml
[2026-03-06 20:09:04] -rw-r--r--. 1 boinc boinc      6560 Mar  6 17:08 init_data.xml
[2026-03-06 20:09:04] -rw-r--r--. 2 boinc boinc 440187074 Mar  6 17:08 EVNT.46701403._000243.pool.root.1
[2026-03-06 20:09:04] -rw-r--r--. 2 boinc boinc     15845 Mar  6 17:08 start_atlas.sh
[2026-03-06 20:09:04] drwxrwx--x. 2 boinc boinc      4096 Mar  6 17:08 shared
[2026-03-06 20:09:04] -rw-r--r--. 2 boinc boinc    597953 Mar  6 17:08 input.tar.gz
[2026-03-06 20:09:04] -rw-r--r--. 1 boinc boinc         0 Mar  6 17:08 boinc_lockfile
[2026-03-06 20:09:04] -rw-r--r--. 1 boinc boinc      2563 Mar  6 17:08 pandaJob.out
[2026-03-06 20:09:04] -rw-------. 1 boinc boinc    998899 Mar  6 17:08 agis_schedconf.cvmfs.json
[2026-03-06 20:09:04] -rw-------. 1 boinc boinc   1521291 Mar  6 17:08 agis_ddmendpoints.agis.ALL.json
[2026-03-06 20:09:04] -rw-------. 1 boinc boinc       452 Mar  6 17:08 workernode_map.json
[2026-03-06 20:09:04] drwx------. 5 boinc boinc      4096 Mar  6 17:08 pilot3
[2026-03-06 20:09:04] -rw-------. 1 boinc boinc 181818329 Mar  6 20:00 HITS.48955006._012120.pool.root.1
[2026-03-06 20:09:04] -rw-r--r--. 1 boinc boinc       530 Mar  6 20:00 boinc_task_state.xml
[2026-03-06 20:09:04] -rw-------. 1 boinc boinc      1033 Mar  6 20:01 memory_monitor_summary.json
[2026-03-06 20:09:04] -rw-------. 1 boinc boinc    358749 Mar  6 20:01 log.48955006._012120.job.log.tgz.1
[2026-03-06 20:09:04] -rw-------. 1 boinc boinc      6407 Mar  6 20:01 heartbeat.json
[2026-03-06 20:09:04] -rw-------. 1 boinc boinc        95 Mar  6 20:01 pilot_heartbeat.json
[2026-03-06 20:09:04] -rw-------. 1 boinc boinc      4901 Mar  6 20:01 pilotlog.txt
[2026-03-06 20:09:04] -rw-------. 1 boinc boinc   1466283 Mar  6 20:01 log.48955006._012120.job.log.1
[2026-03-06 20:09:04] -rw-------. 1 boinc boinc       357 Mar  6 20:01 output.list
[2026-03-06 20:09:04] -rw-r--r--. 1 boinc boinc       620 Mar  6 20:01 runtime_log
[2026-03-06 20:09:04] -rw-------. 1 boinc boinc   1843200 Mar  6 20:01 result.tar.gz
[2026-03-06 20:09:04] -rw-r--r--. 1 boinc boinc      9205 Mar  6 20:01 runtime_log.err
[2026-03-06 20:09:04] -rw-------. 1 boinc boinc       664 Mar  6 20:01 OOrMDmaWWI9n9Rq4apOajLDm4fhM0noT9bVooX4SDm37MLDmD6j7Gn.diag
[2026-03-06 20:09:04] -rw-r--r--. 1 boinc boinc        26 Mar  6 20:08 wrapper_checkpoint.txt
[2026-03-06 20:09:04] -rw-r--r--. 1 boinc boinc      8192 Mar  6 20:09 boinc_mmap_file
[2026-03-06 20:09:04] -rw-r--r--. 1 boinc boinc     20857 Mar  6 20:09 stderr.txt
[2026-03-06 20:09:04] HITS file was successfully produced:
[2026-03-06 20:09:04] -rw-------. 1 boinc boinc 181818329 Mar  6 20:00 shared/HITS.pool.root.1
[2026-03-06 20:09:04]  *** Contents of shared directory: ***
[2026-03-06 20:09:04] total 609840
[2026-03-06 20:09:04] -rw-r--r--. 2 boinc boinc 440187074 Mar  6 17:08 ATLAS.root_0
[2026-03-06 20:09:04] -rw-r--r--. 2 boinc boinc     15845 Mar  6 17:08 start_atlas.sh
[2026-03-06 20:09:04] -rw-r--r--. 2 boinc boinc    597953 Mar  6 17:08 input.tar.gz
[2026-03-06 20:09:04] -rw-------. 1 boinc boinc 181818329 Mar  6 20:00 HITS.pool.root.1
[2026-03-06 20:09:04] -rw-------. 1 boinc boinc   1843200 Mar  6 20:01 result.tar.gz
20:09:06 (4179725): run_atlas exited; CPU time 39348.941193
20:09:06 (4179725): called boinc_finish(0)

</stderr_txt>
]]>

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