Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:10:17 (2843511): wrapper (7.7.26015): starting
06:10:17 (2843511): wrapper: running run_atlas (--nthreads 4)
[2026-03-06 06:10:17] Arguments: --nthreads 4
[2026-03-06 06:10:17] Threads: 4
[2026-03-06 06:10:17] Checking for CVMFS
[2026-03-06 06:10:17] No cvmfs_config command found, will try listing directly
[2026-03-06 06:10:17] CVMFS is ok
[2026-03-06 06:10:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 06:10:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 06:10:17] Further information can be found at the LHC@home message board.
[2026-03-06 06:10:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 06:10:17] Checking for apptainer binary...
[2026-03-06 06:10:17] which: no apptainer in ((null))
[2026-03-06 06:10:17] apptainer is not installed, using version from CVMFS
[2026-03-06 06:10:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 06:10:17] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot56/slots/6/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-06 06:10:17] apptainer works
[2026-03-06 06:10:17] Set ATHENA_PROC_NUMBER=4
[2026-03-06 06:10:17] Set ATHENA_CORE_NUMBER=4
[2026-03-06 06:10:17] Starting ATLAS job with PandaID=7042414643
[2026-03-06 06:10:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot56/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 07:48:44]  *** The last 200 lines of the pilot log: ***
[2026-03-06 07:48:44]  guid=4923db79-327a-49be-839a-72d26f81694b
[2026-03-06 07:48:44]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-06 07:48:44]  is_altstaged=None
[2026-03-06 07:48:44]  is_tar=False
[2026-03-06 07:48:44]  lfn=log.48958627._003499.job.log.tgz.1
[2026-03-06 07:48:44]  mtime=0
[2026-03-06 07:48:44]  protocol_id=None
[2026-03-06 07:48:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-06 07:48:44]  replicas=None
[2026-03-06 07:48:44]  scope=mc23_13p6TeV
[2026-03-06 07:48:44]  status=None
[2026-03-06 07:48:44]  status_code=0
[2026-03-06 07:48:44]  storage_token=
[2026-03-06 07:48:44]  surl=/var/lib/boinc/var/slot56/slots/6/PanDA_Pilot-7042414643/log.48958627._003499.job.log.tgz.1
[2026-03-06 07:48:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/82/log.48958627._003499.job.log.tgz.1
[2026-03-06 07:48:44]  workdir=None
[2026-03-06 07:48:44] ]
[2026-03-06 07:48:44] 2026-03-06 06:48:02,097 | INFO     | transferring file log.48958627._003499.job.log.tgz.1 from /var/lib/boinc/var/slot56/slots/6/PanDA_Pilot-7042414643/log.48958627._003499.job.log.tgz.1 to /var/lib/b
[2026-03-06 07:48:44] 2026-03-06 06:48:02,097 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot56/slots/6/PanDA_Pilot-7042414643/log.48958627._003499.job.log.tgz.1 /var/lib/boinc/var/slot56/slots/6/lo
[2026-03-06 07:48:44] 2026-03-06 06:48:02,111 | INFO     | adding to output.list: log.48958627._003499.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/82/log.48958627._003499.job.log.tg
[2026-03-06 07:48:44] 2026-03-06 06:48:02,112 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-06 07:48:44] 2026-03-06 06:48:02,112 | INFO     | summary of transferred files:
[2026-03-06 07:48:44] 2026-03-06 06:48:02,112 | INFO     |  -- lfn=log.48958627._003499.job.log.tgz.1, status_code=0, status=transferred
[2026-03-06 07:48:44] 2026-03-06 06:48:02,112 | INFO     | stage-out finished correctly
[2026-03-06 07:48:44] 2026-03-06 06:48:02,195 | INFO     | time since job start (5853s) is within the limit (349056.0s)
[2026-03-06 07:48:44] 2026-03-06 06:48:02,460 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-06 07:48:44] 2026-03-06 06:48:04,201 | INFO     | time since job start (5855s) is within the limit (349056.0s)
[2026-03-06 07:48:44] 2026-03-06 06:48:04,398 | INFO     | monitor loop #427: job 0:7042414643 is in state 'finished'
[2026-03-06 07:48:44] 2026-03-06 06:48:04,399 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-06 07:48:44] 2026-03-06 06:48:04,884 | INFO     | job 7042414643 has state=finished
[2026-03-06 07:48:44] 2026-03-06 06:48:04,884 | INFO     | preparing for final server update for job 7042414643 in state='finished'
[2026-03-06 07:48:44] 2026-03-06 06:48:04,884 | INFO     | reading metadata from: /var/lib/boinc/var/slot56/slots/6/PanDA_Pilot-7042414643/jobReport.json
[2026-03-06 07:48:44] 2026-03-06 06:48:04,886 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot56/slots/6/workernode_map.json
[2026-03-06 07:48:44] 2026-03-06 06:48:04,886 | INFO     | this job has now completed (state=finished)
[2026-03-06 07:48:44] 2026-03-06 06:48:04,886 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-06 07:48:44] 2026-03-06 06:48:04,886 | INFO     | log transfer has been attempted: DONE
[2026-03-06 07:48:44] 2026-03-06 06:48:04,886 | INFO     | job 7042414643 has finished - writing final server update
[2026-03-06 07:48:44] 2026-03-06 06:48:04,887 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2678615/.job.ad'
[2026-03-06 07:48:44] 2026-03-06 06:48:04,887 | INFO     | total number of processed events: 400 (read)
[2026-03-06 07:48:44] 2026-03-06 06:48:04,904 | INFO     | using path: /var/lib/boinc/var/slot56/slots/6/PanDA_Pilot-7042414643/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 07:48:44] 2026-03-06 06:48:04,904 | INFO     | extracted standard info from prmon json
[2026-03-06 07:48:44] 2026-03-06 06:48:04,904 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 07:48:44] 2026-03-06 06:48:04,904 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 07:48:44] 2026-03-06 06:48:04,904 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 07:48:44] 2026-03-06 06:48:04,904 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 07:48:44] 2026-03-06 06:48:04,906 | INFO     | fitting pss+swap vs Time
[2026-03-06 07:48:44] 2026-03-06 06:48:04,906 | INFO     | sum of square deviations: 218571540.0
[2026-03-06 07:48:44] 2026-03-06 06:48:04,906 | INFO     | sum of deviations: 1181149222.0
[2026-03-06 07:48:44] 2026-03-06 06:48:04,906 | INFO     | mean x: 1772776839.0
[2026-03-06 07:48:44] 2026-03-06 06:48:04,906 | INFO     | mean y: 2344041.9213483147
[2026-03-06 07:48:44] 2026-03-06 06:48:04,906 | INFO     | intersect: -9577649694.520592
[2026-03-06 07:48:44] 2026-03-06 06:48:04,906 | INFO     | chi2: 0.0004077350717680167
[2026-03-06 07:48:44] 2026-03-06 06:48:04,906 | INFO     | current memory leak: 5.40 B/s (using 89 data points, chi2=0.00)
[2026-03-06 07:48:44] 2026-03-06 06:48:04,907 | INFO     | could have reported an average CPU frequency of 3637 MHz (7 samples)
[2026-03-06 07:48:44] 2026-03-06 06:48:04,907 | INFO     | ..............................
[2026-03-06 07:48:44] 2026-03-06 06:48:04,907 | INFO     | . Timing measurements:
[2026-03-06 07:48:44] 2026-03-06 06:48:04,907 | INFO     | . get job = 0 s
[2026-03-06 07:48:44] 2026-03-06 06:48:04,907 | INFO     | . initial setup = 4 s
[2026-03-06 07:48:44] 2026-03-06 06:48:04,907 | INFO     | . payload setup = 5 s
[2026-03-06 07:48:44] 2026-03-06 06:48:04,907 | INFO     | . stage-in = 0 s
[2026-03-06 07:48:44] 2026-03-06 06:48:04,907 | INFO     | . payload execution = 5832 s
[2026-03-06 07:48:44] 2026-03-06 06:48:04,907 | INFO     | . stage-out = 0 s
[2026-03-06 07:48:44] 2026-03-06 06:48:04,907 | INFO     | . log creation = 0 s
[2026-03-06 07:48:44] 2026-03-06 06:48:04,907 | INFO     | ..............................
[2026-03-06 07:48:44] 2026-03-06 06:48:04,953 | INFO     | 
[2026-03-06 07:48:44] 2026-03-06 06:48:04,953 | INFO     | job summary report
[2026-03-06 07:48:44] 2026-03-06 06:48:04,953 | INFO     | --------------------------------------------------
[2026-03-06 07:48:44] 2026-03-06 06:48:04,953 | INFO     | PanDA job id: 7042414643
[2026-03-06 07:48:44] 2026-03-06 06:48:04,953 | INFO     | task id: 48958627
[2026-03-06 07:48:44] 2026-03-06 06:48:04,953 | INFO     | errors: (none)
[2026-03-06 07:48:44] 2026-03-06 06:48:04,953 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 07:48:44] 2026-03-06 06:48:04,953 | INFO     | pilot state: finished 
[2026-03-06 07:48:44] 2026-03-06 06:48:04,953 | INFO     | transexitcode: 0
[2026-03-06 07:48:44] 2026-03-06 06:48:04,953 | INFO     | exeerrorcode: 0
[2026-03-06 07:48:44] 2026-03-06 06:48:04,953 | INFO     | exeerrordiag: 
[2026-03-06 07:48:44] 2026-03-06 06:48:04,953 | INFO     | exitcode: 0
[2026-03-06 07:48:44] 2026-03-06 06:48:04,953 | INFO     | exitmsg: OK
[2026-03-06 07:48:44] 2026-03-06 06:48:04,953 | INFO     | cpuconsumptiontime: 22466 s
[2026-03-06 07:48:44] 2026-03-06 06:48:04,953 | INFO     | nevents: 400
[2026-03-06 07:48:44] 2026-03-06 06:48:04,954 | INFO     | neventsw: 0
[2026-03-06 07:48:44] 2026-03-06 06:48:04,954 | INFO     | pid: 2854075
[2026-03-06 07:48:44] 2026-03-06 06:48:04,954 | INFO     | pgrp: 2854075
[2026-03-06 07:48:44] 2026-03-06 06:48:04,954 | INFO     | corecount: 4
[2026-03-06 07:48:44] 2026-03-06 06:48:04,954 | INFO     | event service: False
[2026-03-06 07:48:44] 2026-03-06 06:48:04,954 | INFO     | sizes: {0: 2295762, 11: 2295762, 5841: 2322538, 5842: 2331614, 5845: 2331752}
[2026-03-06 07:48:44] 2026-03-06 06:48:04,954 | INFO     | --------------------------------------------------
[2026-03-06 07:48:44] 2026-03-06 06:48:04,954 | INFO     | 
[2026-03-06 07:48:44] 2026-03-06 06:48:04,954 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot56/slots/6
[2026-03-06 07:48:44] 2026-03-06 06:48:04,971 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 07:48:44] 2026-03-06 06:48:04,971 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 07:48:44] 2026-03-06 06:48:04,971 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 07:48:44] 2026-03-06 06:48:04,971 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 07:48:44] 2026-03-06 06:48:04,971 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 07:48:44] 2026-03-06 06:48:04,971 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 07:48:44] 2026-03-06 06:48:04,971 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 07:48:44] 2026-03-06 06:48:04,971 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 07:48:44] 2026-03-06 06:48:04,972 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 07:48:44] 2026-03-06 06:48:04,972 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 07:48:44] 2026-03-06 06:48:04,972 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 07:48:44] 2026-03-06 06:48:04,972 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 07:48:44] 2026-03-06 06:48:04,972 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 07:48:44] 2026-03-06 06:48:04,972 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 07:48:44] 2026-03-06 06:48:04,972 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 07:48:44] 2026-03-06 06:48:04,972 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 07:48:44] 2026-03-06 06:48:04,972 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 07:48:44] 2026-03-06 06:48:04,972 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 07:48:44] 2026-03-06 06:48:04,972 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 07:48:44] 2026-03-06 06:48:04,972 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 07:48:44] 2026-03-06 06:48:04,972 | INFO     | job 7042414643 has completed (purged errors)
[2026-03-06 07:48:44] 2026-03-06 06:48:04,972 | INFO     | overall cleanup function is called
[2026-03-06 07:48:44] 2026-03-06 06:48:05,978 | INFO     | --- collectZombieJob: --- 10, [2854075]
[2026-03-06 07:48:44] 2026-03-06 06:48:05,979 | INFO     | zombie collector waiting for pid 2854075
[2026-03-06 07:48:44] 2026-03-06 06:48:05,979 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 07:48:44] 2026-03-06 06:48:05,979 | INFO     | collected zombie processes
[2026-03-06 07:48:44] 2026-03-06 06:48:05,979 | INFO     | will attempt to kill all subprocesses of pid=2854075
[2026-03-06 07:48:44] 2026-03-06 06:48:06,401 | INFO     | process IDs to be killed: [2854075] (in reverse order)
[2026-03-06 07:48:44] 2026-03-06 06:48:06,602 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 07:48:44] 2026-03-06 06:48:06,602 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 07:48:44] 2026-03-06 06:48:06,629 | INFO     | did not find any defunct processes belonging to 2854075
[2026-03-06 07:48:44] 2026-03-06 06:48:06,655 | INFO     | did not find any defunct processes belonging to 2854075
[2026-03-06 07:48:44] 2026-03-06 06:48:06,655 | INFO     | ready for new job
[2026-03-06 07:48:44] 2026-03-06 06:48:06,655 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 07:48:44] 2026-03-06 06:48:06,657 | INFO     | **************************************
[2026-03-06 07:48:44] 2026-03-06 06:48:06,657 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 07:48:44] 2026-03-06 06:48:06,657 | INFO     | **************************************
[2026-03-06 07:48:44] 2026-03-06 06:48:06,657 | INFO     | 
[2026-03-06 07:48:44] 2026-03-06 06:48:06,663 | INFO     | architecture information:
[2026-03-06 07:48:44] 2026-03-06 06:48:06,663 | INFO     | executing command: cat /etc/os-release
[2026-03-06 07:48:44] 2026-03-06 06:48:06,677 | INFO     | cat /etc/os-release:
[2026-03-06 07:48:44] NAME="CentOS Linux"
[2026-03-06 07:48:44] VERSION="7 (Core)"
[2026-03-06 07:48:44] ID="centos"
[2026-03-06 07:48:44] ID_LIKE="rhel fedora"
[2026-03-06 07:48:44] VERSION_ID="7"
[2026-03-06 07:48:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 07:48:44] ANSI_COLOR="0;31"
[2026-03-06 07:48:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 07:48:44] HOME_URL="https://www.centos.org/"
[2026-03-06 07:48:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 07:48:44] 
[2026-03-06 07:48:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 07:48:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 07:48:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 07:48:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 07:48:44] 
[2026-03-06 07:48:44] 2026-03-06 06:48:06,677 | INFO     | **************************************
[2026-03-06 07:48:44] 2026-03-06 06:48:07,180 | INFO     | executing command: df -mP /var/lib/boinc/var/slot56/slots/6
[2026-03-06 07:48:44] 2026-03-06 06:48:07,196 | INFO     | sufficient remaining disk space (20255342592 B)
[2026-03-06 07:48:44] 2026-03-06 06:48:07,197 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 07:48:44] 2026-03-06 06:48:07,197 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 07:48:44] 2026-03-06 06:48:07,197 | INFO     | update_server=False
[2026-03-06 07:48:44] 2026-03-06 06:48:07,197 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 07:48:44] 2026-03-06 06:48:07,636 | INFO     | all data control threads have been joined
[2026-03-06 07:48:44] 2026-03-06 06:48:07,665 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 07:48:44] 2026-03-06 06:48:07,906 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 07:48:44] 2026-03-06 06:48:07,907 | INFO     | aborting loop
[2026-03-06 07:48:44] 2026-03-06 06:48:08,088 | INFO     | all payload control threads have been joined
[2026-03-06 07:48:44] 2026-03-06 06:48:08,202 | INFO     | [job] retrieve thread has finished
[2026-03-06 07:48:44] 2026-03-06 06:48:08,513 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 07:48:44] 2026-03-06 06:48:08,595 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 07:48:44] 2026-03-06 06:48:08,640 | INFO     | [data] control thread has finished
[2026-03-06 07:48:44] 2026-03-06 06:48:08,656 | INFO     | all job control threads have been joined
[2026-03-06 07:48:44] 2026-03-06 06:48:08,734 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 07:48:44] 2026-03-06 06:48:08,770 | INFO     | [job] validate thread has finished
[2026-03-06 07:48:44] 2026-03-06 06:48:08,912 | INFO     | [job] job monitor thread has finished
[2026-03-06 07:48:44] 2026-03-06 06:48:08,934 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 07:48:44] 2026-03-06 06:48:09,043 | INFO     | [payload] validate_post thread has finished
[2026-03-06 07:48:44] 2026-03-06 06:48:09,080 | INFO     | [data] copytool_in thread has finished
[2026-03-06 07:48:44] 2026-03-06 06:48:09,092 | INFO     | [payload] control thread has finished
[2026-03-06 07:48:44] 2026-03-06 06:48:09,600 | INFO     | [payload] failed_post thread has finished
[2026-03-06 07:48:44] 2026-03-06 06:48:09,662 | INFO     | [job] control thread has finished
[2026-03-06 07:48:44] 2026-03-06 06:48:09,671 | INFO     | [data] copytool_out thread has finished
[2026-03-06 07:48:44] 2026-03-06 06:48:09,963 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 07:48:44] 2026-03-06 06:48:10,967 | INFO     | [job] queue monitor thread has finished
[2026-03-06 07:48:44] 2026-03-06 06:48:12,518 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 07:48:44] 2026-03-06 06:48:18,117 | INFO     | job.realtimelogging is not enabled
[2026-03-06 07:48:44] 2026-03-06 06:48:19,122 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 07:48:44] 2026-03-06 06:48:37,758 | INFO     | PID=2848198 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 07:48:44] 2026-03-06 06:48:37,758 | INFO     | .. there are 44 such processes running
[2026-03-06 07:48:44] 2026-03-06 06:48:37,759 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 07:48:44] 2026-03-06 06:48:37,759 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 07:48:44] 2026-03-06 06:48:37,759 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 07:48:44] 2026-03-06 06:48:38,278 | INFO     | [monitor] cgroup control has ended
[2026-03-06 07:48:44] 2026-03-06 06:48:38,700 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23217261287232)>', '<ExcThread(monitor, started 23217019557632)>']
[2026-03-06 07:48:44] 2026-03-06 06:48:38,764 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 07:48:44] 2026-03-06 06:48:38,765 | INFO     | [monitor] control thread has ended
[2026-03-06 07:48:44] 2026-03-06 06:48:43,726 | INFO     | all workflow threads have been joined
[2026-03-06 07:48:44] 2026-03-06 06:48:43,726 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 07:48:44] 2026-03-06 06:48:43,727 | INFO     | traces error code: 0
[2026-03-06 07:48:44] 2026-03-06 06:48:43,727 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 07:48:44] 2026-03-06 06:48:43,897 [wrapper] ==== pilot stdout END ====
[2026-03-06 07:48:44] 2026-03-06 06:48:43,899 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 07:48:44] 2026-03-06 06:48:43,904 [wrapper] pilotpid: 2848198
[2026-03-06 07:48:44] 2026-03-06 06:48:43,906 [wrapper] Pilot exit status: 0
[2026-03-06 07:48:44] 2026-03-06 06:48:43,915 [wrapper] pandaids: 7042414643
[2026-03-06 07:48:44] 2026-03-06 06:48:44,033 [wrapper] cleanup supervisor_pilot 3745284 2848199
[2026-03-06 07:48:44] 2026-03-06 06:48:44,036 [wrapper] Test setup, not cleaning
[2026-03-06 07:48:44] 2026-03-06 06:48:44,039 [wrapper] apfmon messages muted
[2026-03-06 07:48:44] 2026-03-06 06:48:44,042 [wrapper] ==== wrapper stdout END ====
[2026-03-06 07:48:44] 2026-03-06 06:48:44,044 [wrapper] ==== wrapper stderr END ====
[2026-03-06 07:48:44]  *** Error codes and diagnostics ***
[2026-03-06 07:48:44]     "exeErrorCode": 0,
[2026-03-06 07:48:44]     "exeErrorDiag": "",
[2026-03-06 07:48:44]     "pilotErrorCode": 0,
[2026-03-06 07:48:44]     "pilotErrorDiag": "",
[2026-03-06 07:48:44]  *** Listing of results directory ***
[2026-03-06 07:48:44] total 477952
[2026-03-06 07:48:44] -rw-r--r--. 1 boinc boinc      5111 Mar  5 22:50 queuedata.json
[2026-03-06 07:48:44] -rwx------. 1 boinc boinc     36322 Mar  5 22:51 runpilot2-wrapper.sh
[2026-03-06 07:48:44] -rw-r--r--. 1 boinc boinc    584627 Mar  5 22:52 pilot3.tar.gz
[2026-03-06 07:48:44] -rw-r--r--. 1 boinc boinc       100 Mar  6 06:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 07:48:44] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 06:08 run_atlas
[2026-03-06 07:48:44] -rw-r--r--. 1 boinc boinc       105 Mar  6 06:08 job.xml
[2026-03-06 07:48:44] -rw-r--r--. 2 boinc boinc 273045358 Mar  6 06:10 EVNT.48958625._000136.pool.root.1
[2026-03-06 07:48:44] -rw-r--r--. 2 boinc boinc     15845 Mar  6 06:10 start_atlas.sh
[2026-03-06 07:48:44] drwxrwx--x. 2 boinc boinc      4096 Mar  6 06:10 shared
[2026-03-06 07:48:44] -rw-r--r--. 2 boinc boinc    597945 Mar  6 06:10 input.tar.gz
[2026-03-06 07:48:44] -rw-r--r--. 1 boinc boinc         0 Mar  6 06:10 boinc_lockfile
[2026-03-06 07:48:44] -rw-r--r--. 1 boinc boinc      2521 Mar  6 06:10 pandaJob.out
[2026-03-06 07:48:44] -rw-------. 1 boinc boinc    998552 Mar  6 06:10 agis_schedconf.cvmfs.json
[2026-03-06 07:48:44] -rw-------. 1 boinc boinc   1521291 Mar  6 06:10 agis_ddmendpoints.agis.ALL.json
[2026-03-06 07:48:44] -rw-------. 1 boinc boinc       444 Mar  6 06:10 workernode_map.json
[2026-03-06 07:48:44] drwx------. 5 boinc boinc      4096 Mar  6 06:10 pilot3
[2026-03-06 07:48:44] -rw-r--r--. 1 boinc boinc      6703 Mar  6 06:10 init_data.xml
[2026-03-06 07:48:44] -rw-------. 1 boinc boinc 210159807 Mar  6 07:47 HITS.48958627._003499.pool.root.1
[2026-03-06 07:48:44] -rw-r--r--. 1 boinc boinc       529 Mar  6 07:47 boinc_task_state.xml
[2026-03-06 07:48:44] -rw-------. 1 boinc boinc      1033 Mar  6 07:47 memory_monitor_summary.json
[2026-03-06 07:48:44] -rw-------. 1 boinc boinc    286904 Mar  6 07:48 log.48958627._003499.job.log.tgz.1
[2026-03-06 07:48:44] -rw-------. 1 boinc boinc      6349 Mar  6 07:48 heartbeat.json
[2026-03-06 07:48:44] -rw-------. 1 boinc boinc        95 Mar  6 07:48 pilot_heartbeat.json
[2026-03-06 07:48:44] -rw-r--r--. 1 boinc boinc      8192 Mar  6 07:48 boinc_mmap_file
[2026-03-06 07:48:44] -rw-r--r--. 1 boinc boinc        27 Mar  6 07:48 wrapper_checkpoint.txt
[2026-03-06 07:48:44] -rw-------. 1 boinc boinc      4901 Mar  6 07:48 pilotlog.txt
[2026-03-06 07:48:44] -rw-------. 1 boinc boinc    850942 Mar  6 07:48 log.48958627._003499.job.log.1
[2026-03-06 07:48:44] -rw-------. 1 boinc boinc       357 Mar  6 07:48 output.list
[2026-03-06 07:48:44] -rw-r--r--. 1 boinc boinc       620 Mar  6 07:48 runtime_log
[2026-03-06 07:48:44] -rw-------. 1 boinc boinc   1157120 Mar  6 07:48 result.tar.gz
[2026-03-06 07:48:44] -rw-------. 1 boinc boinc       662 Mar  6 07:48 xXNNDm1mVI9n9Rq4apOajLDm4fhM0noT9bVooX4SDma5MLDmQpPIZn.diag
[2026-03-06 07:48:44] -rw-r--r--. 1 boinc boinc      9204 Mar  6 07:48 runtime_log.err
[2026-03-06 07:48:44] -rw-r--r--. 1 boinc boinc     21211 Mar  6 07:48 stderr.txt
[2026-03-06 07:48:44] HITS file was successfully produced:
[2026-03-06 07:48:44] -rw-------. 1 boinc boinc 210159807 Mar  6 07:47 shared/HITS.pool.root.1
[2026-03-06 07:48:44]  *** Contents of shared directory: ***
[2026-03-06 07:48:44] total 473624
[2026-03-06 07:48:44] -rw-r--r--. 2 boinc boinc 273045358 Mar  6 06:10 ATLAS.root_0
[2026-03-06 07:48:44] -rw-r--r--. 2 boinc boinc     15845 Mar  6 06:10 start_atlas.sh
[2026-03-06 07:48:44] -rw-r--r--. 2 boinc boinc    597945 Mar  6 06:10 input.tar.gz
[2026-03-06 07:48:44] -rw-------. 1 boinc boinc 210159807 Mar  6 07:47 HITS.pool.root.1
[2026-03-06 07:48:44] -rw-------. 1 boinc boinc   1157120 Mar  6 07:48 result.tar.gz
07:48:45 (2843511): run_atlas exited; CPU time 22715.438156
07:48:45 (2843511): called boinc_finish(0)

</stderr_txt>
]]>

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