Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:39:19 (4058252): wrapper (7.7.26015): starting
17:39:19 (4058252): wrapper: running run_atlas (--nthreads 4)
[2026-03-06 17:39:19] Arguments: --nthreads 4
[2026-03-06 17:39:19] Threads: 4
[2026-03-06 17:39:19] Checking for CVMFS
[2026-03-06 17:39:19] No cvmfs_config command found, will try listing directly
[2026-03-06 17:39:19] CVMFS is ok
[2026-03-06 17:39:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 17:39:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 17:39:19] Further information can be found at the LHC@home message board.
[2026-03-06 17:39:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 17:39:19] Checking for apptainer binary...
[2026-03-06 17:39:19] which: no apptainer in ((null))
[2026-03-06 17:39:19] apptainer is not installed, using version from CVMFS
[2026-03-06 17:39:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 17:39:19] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-03-06 17:39:19] apptainer works
[2026-03-06 17:39:19] Set ATHENA_PROC_NUMBER=4
[2026-03-06 17:39:19] Set ATHENA_CORE_NUMBER=4
[2026-03-06 17:39:19] Starting ATLAS job with PandaID=7038764959
[2026-03-06 17:39:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 20:45:26]  *** The last 200 lines of the pilot log: ***
[2026-03-06 20:45:26] 2026-03-06 19:42:16,019 | INFO     | job 7038764959 has finished - writing final server update
[2026-03-06 20:45:26] 2026-03-06 19:42:16,019 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_40923/.job.ad'
[2026-03-06 20:45:26] 2026-03-06 19:42:16,019 | INFO     | total number of processed events: 400 (read)
[2026-03-06 20:45:26] 2026-03-06 19:42:16,032 | INFO     | using path: /var/lib/boinc/var/slot52/slots/0/PanDA_Pilot-7038764959/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 20:45:26] 2026-03-06 19:42:16,032 | INFO     | extracted standard info from prmon json
[2026-03-06 20:45:26] 2026-03-06 19:42:16,033 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 20:45:26] 2026-03-06 19:42:16,033 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 20:45:26] 2026-03-06 19:42:16,033 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 20:45:26] 2026-03-06 19:42:16,033 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 20:45:26] 2026-03-06 19:42:16,037 | INFO     | fitting pss+swap vs Time
[2026-03-06 20:45:26] 2026-03-06 19:42:16,037 | INFO     | sum of square deviations: 1808350185.0
[2026-03-06 20:45:26] 2026-03-06 19:42:16,038 | INFO     | sum of deviations: 3543744583.500004
[2026-03-06 20:45:26] 2026-03-06 19:42:16,038 | INFO     | mean x: 1772820661.5
[2026-03-06 20:45:26] 2026-03-06 19:42:16,038 | INFO     | mean y: 2302723.0055555557
[2026-03-06 20:45:26] 2026-03-06 19:42:16,039 | INFO     | intersect: -3471816210.826676
[2026-03-06 20:45:26] 2026-03-06 19:42:16,039 | INFO     | chi2: 2.135361850778394
[2026-03-06 20:45:26] 2026-03-06 19:42:16,039 | INFO     | sum of square deviations: 1661798600.0
[2026-03-06 20:45:26] 2026-03-06 19:42:16,040 | INFO     | sum of deviations: 14206756893.999998
[2026-03-06 20:45:26] 2026-03-06 19:42:16,040 | INFO     | mean x: 1772820509.0
[2026-03-06 20:45:26] 2026-03-06 19:42:16,041 | INFO     | mean y: 2313561.8914285717
[2026-03-06 20:45:26] 2026-03-06 19:42:16,041 | INFO     | intersect: -15153572348.748005
[2026-03-06 20:45:26] 2026-03-06 19:42:16,041 | INFO     | chi2: 1.3771065857013054
[2026-03-06 20:45:26] 2026-03-06 19:42:16,041 | INFO     | current chi2=1.3771065857013054 (change=35.50945076595263 %)
[2026-03-06 20:45:26] 2026-03-06 19:42:16,041 | INFO     | sum of square deviations: 1523386702.5
[2026-03-06 20:45:26] 2026-03-06 19:42:16,042 | INFO     | sum of deviations: 13716623357.999998
[2026-03-06 20:45:26] 2026-03-06 19:42:16,043 | INFO     | mean x: 1772820356.5
[2026-03-06 20:45:26] 2026-03-06 19:42:16,043 | INFO     | mean y: 2313021.7294117645
[2026-03-06 20:45:26] 2026-03-06 19:42:16,043 | INFO     | intersect: -15960219059.980013
[2026-03-06 20:45:26] 2026-03-06 19:42:16,043 | INFO     | chi2: 1.3782202419972098
[2026-03-06 20:45:26] 2026-03-06 19:42:16,043 | INFO     | current chi2=1.3782202419972098 (change=-0.08086928836646945 %)
[2026-03-06 20:45:26] 2026-03-06 19:42:16,043 | INFO     | right removable region: 169
[2026-03-06 20:45:26] 2026-03-06 19:42:16,044 | INFO     | sum of square deviations: 1661798600.0
[2026-03-06 20:45:26] 2026-03-06 19:42:16,045 | INFO     | sum of deviations: -18995425437.0
[2026-03-06 20:45:26] 2026-03-06 19:42:16,045 | INFO     | mean x: 1772820814.0
[2026-03-06 20:45:26] 2026-03-06 19:42:16,045 | INFO     | mean y: 2325833.4685714287
[2026-03-06 20:45:26] 2026-03-06 19:42:16,045 | INFO     | intersect: 20266806490.449898
[2026-03-06 20:45:26] 2026-03-06 19:42:16,045 | INFO     | chi2: 0.8159382096126164
[2026-03-06 20:45:26] 2026-03-06 19:42:16,046 | INFO     | current chi2=0.8159382096126164 (change=61.78922980593728 %)
[2026-03-06 20:45:26] 2026-03-06 19:42:16,046 | INFO     | sum of square deviations: 1523386702.5
[2026-03-06 20:45:26] 2026-03-06 19:42:16,047 | INFO     | sum of deviations: -16644722696.499998
[2026-03-06 20:45:26] 2026-03-06 19:42:16,047 | INFO     | mean x: 1772820966.5
[2026-03-06 20:45:26] 2026-03-06 19:42:16,048 | INFO     | mean y: 2323237.9588235295
[2026-03-06 20:45:26] 2026-03-06 19:42:16,048 | INFO     | intersect: 19372397382.303413
[2026-03-06 20:45:26] 2026-03-06 19:42:16,048 | INFO     | chi2: 0.8138609336681014
[2026-03-06 20:45:26] 2026-03-06 19:42:16,048 | INFO     | current chi2=0.8138609336681014 (change=0.25458740870846597 %)
[2026-03-06 20:45:26] 2026-03-06 19:42:16,048 | INFO     | left removable region: 20
[2026-03-06 20:45:26] 2026-03-06 19:42:16,049 | INFO     | sum of square deviations: 1025693650.0
[2026-03-06 20:45:26] 2026-03-06 19:42:16,050 | INFO     | sum of deviations: -981369708.0000004
[2026-03-06 20:45:26] 2026-03-06 19:42:16,050 | INFO     | mean x: 1772820936.0
[2026-03-06 20:45:26] 2026-03-06 19:42:16,050 | INFO     | mean y: 2328632.4161073826
[2026-03-06 20:45:26] 2026-03-06 19:42:16,050 | INFO     | intersect: 1698539547.1454785
[2026-03-06 20:45:26] 2026-03-06 19:42:16,050 | INFO     | chi2: 0.01694974761389263
[2026-03-06 20:45:26] 2026-03-06 19:42:16,050 | INFO     | current memory leak: -0.96 B/s (using 149 data points, chi2=0.02)
[2026-03-06 20:45:26] 2026-03-06 19:42:16,051 | INFO     | could have reported an average CPU frequency of 2538 MHz (10 samples)
[2026-03-06 20:45:26] 2026-03-06 19:42:16,051 | INFO     | ..............................
[2026-03-06 20:45:26] 2026-03-06 19:42:16,051 | INFO     | . Timing measurements:
[2026-03-06 20:45:26] 2026-03-06 19:42:16,051 | INFO     | . get job = 0 s
[2026-03-06 20:45:26] 2026-03-06 19:42:16,051 | INFO     | . initial setup = 6 s
[2026-03-06 20:45:26] 2026-03-06 19:42:16,051 | INFO     | . payload setup = 7 s
[2026-03-06 20:45:26] 2026-03-06 19:42:16,052 | INFO     | . stage-in = 0 s
[2026-03-06 20:45:26] 2026-03-06 19:42:16,052 | INFO     | . payload execution = 10929 s
[2026-03-06 20:45:26] 2026-03-06 19:42:16,052 | INFO     | . stage-out = 1 s
[2026-03-06 20:45:26] 2026-03-06 19:42:16,052 | INFO     | . log creation = 0 s
[2026-03-06 20:45:26] 2026-03-06 19:42:16,052 | INFO     | ..............................
[2026-03-06 20:45:26] 2026-03-06 19:42:16,149 | INFO     | 
[2026-03-06 20:45:26] 2026-03-06 19:42:16,150 | INFO     | job summary report
[2026-03-06 20:45:26] 2026-03-06 19:42:16,150 | INFO     | --------------------------------------------------
[2026-03-06 20:45:26] 2026-03-06 19:42:16,150 | INFO     | PanDA job id: 7038764959
[2026-03-06 20:45:26] 2026-03-06 19:42:16,150 | INFO     | task id: 48955006
[2026-03-06 20:45:26] 2026-03-06 19:42:16,150 | INFO     | errors: (none)
[2026-03-06 20:45:26] 2026-03-06 19:42:16,150 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 20:45:26] 2026-03-06 19:42:16,150 | INFO     | pilot state: finished 
[2026-03-06 20:45:26] 2026-03-06 19:42:16,150 | INFO     | transexitcode: 0
[2026-03-06 20:45:26] 2026-03-06 19:42:16,150 | INFO     | exeerrorcode: 0
[2026-03-06 20:45:26] 2026-03-06 19:42:16,150 | INFO     | exeerrordiag: 
[2026-03-06 20:45:26] 2026-03-06 19:42:16,150 | INFO     | exitcode: 0
[2026-03-06 20:45:26] 2026-03-06 19:42:16,151 | INFO     | exitmsg: OK
[2026-03-06 20:45:26] 2026-03-06 19:42:16,151 | INFO     | cpuconsumptiontime: 41220 s
[2026-03-06 20:45:26] 2026-03-06 19:42:16,151 | INFO     | nevents: 400
[2026-03-06 20:45:26] 2026-03-06 19:42:16,151 | INFO     | neventsw: 0
[2026-03-06 20:45:26] 2026-03-06 19:42:16,151 | INFO     | pid: 4083725
[2026-03-06 20:45:26] 2026-03-06 19:42:16,151 | INFO     | pgrp: 4083725
[2026-03-06 20:45:26] 2026-03-06 19:42:16,151 | INFO     | corecount: 4
[2026-03-06 20:45:26] 2026-03-06 19:42:16,151 | INFO     | event service: False
[2026-03-06 20:45:26] 2026-03-06 19:42:16,151 | INFO     | sizes: {0: 2295816, 11: 2295816, 10940: 2325248, 10941: 2325247, 10943: 2334323, 10946: 2334379, 10947: 2334701}
[2026-03-06 20:45:26] 2026-03-06 19:42:16,151 | INFO     | --------------------------------------------------
[2026-03-06 20:45:26] 2026-03-06 19:42:16,151 | INFO     | 
[2026-03-06 20:45:26] 2026-03-06 19:42:16,151 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot52/slots/0
[2026-03-06 20:45:26] 2026-03-06 19:42:16,175 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 20:45:26] 2026-03-06 19:42:16,175 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 20:45:26] 2026-03-06 19:42:16,175 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 20:45:26] 2026-03-06 19:42:16,176 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 20:45:26] 2026-03-06 19:42:16,176 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 20:45:26] 2026-03-06 19:42:16,176 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 20:45:26] 2026-03-06 19:42:16,176 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 20:45:26] 2026-03-06 19:42:16,176 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 20:45:26] 2026-03-06 19:42:16,176 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 20:45:26] 2026-03-06 19:42:16,176 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 20:45:26] 2026-03-06 19:42:16,176 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 20:45:26] 2026-03-06 19:42:16,176 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 20:45:26] 2026-03-06 19:42:16,176 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 20:45:26] 2026-03-06 19:42:16,176 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 20:45:26] 2026-03-06 19:42:16,176 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 20:45:26] 2026-03-06 19:42:16,177 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 20:45:26] 2026-03-06 19:42:16,177 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 20:45:26] 2026-03-06 19:42:16,177 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 20:45:26] 2026-03-06 19:42:16,177 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 20:45:26] 2026-03-06 19:42:16,177 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 20:45:26] 2026-03-06 19:42:16,177 | INFO     | job 7038764959 has completed (purged errors)
[2026-03-06 20:45:26] 2026-03-06 19:42:16,177 | INFO     | overall cleanup function is called
[2026-03-06 20:45:26] 2026-03-06 19:42:17,185 | INFO     | --- collectZombieJob: --- 10, [4083725]
[2026-03-06 20:45:26] 2026-03-06 19:42:17,186 | INFO     | zombie collector waiting for pid 4083725
[2026-03-06 20:45:26] 2026-03-06 19:42:17,186 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 20:45:26] 2026-03-06 19:42:17,186 | INFO     | collected zombie processes
[2026-03-06 20:45:26] 2026-03-06 19:42:17,186 | INFO     | will attempt to kill all subprocesses of pid=4083725
[2026-03-06 20:45:26] 2026-03-06 19:42:17,595 | INFO     | process IDs to be killed: [4083725] (in reverse order)
[2026-03-06 20:45:26] 2026-03-06 19:42:17,727 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 20:45:26] 2026-03-06 19:42:17,729 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 20:45:26] 2026-03-06 19:42:17,742 | INFO     | did not find any defunct processes belonging to 4083725
[2026-03-06 20:45:26] 2026-03-06 19:42:17,755 | INFO     | did not find any defunct processes belonging to 4083725
[2026-03-06 20:45:26] 2026-03-06 19:42:17,756 | INFO     | ready for new job
[2026-03-06 20:45:26] 2026-03-06 19:42:17,756 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 20:45:26] 2026-03-06 19:42:17,758 | INFO     | **************************************
[2026-03-06 20:45:26] 2026-03-06 19:42:17,758 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 20:45:26] 2026-03-06 19:42:17,758 | INFO     | **************************************
[2026-03-06 20:45:26] 2026-03-06 19:42:17,758 | INFO     | 
[2026-03-06 20:45:26] 2026-03-06 19:42:17,762 | INFO     | architecture information:
[2026-03-06 20:45:26] 2026-03-06 19:42:17,762 | INFO     | executing command: cat /etc/os-release
[2026-03-06 20:45:26] 2026-03-06 19:42:17,781 | INFO     | cat /etc/os-release:
[2026-03-06 20:45:26] NAME="CentOS Linux"
[2026-03-06 20:45:26] VERSION="7 (Core)"
[2026-03-06 20:45:26] ID="centos"
[2026-03-06 20:45:26] ID_LIKE="rhel fedora"
[2026-03-06 20:45:26] VERSION_ID="7"
[2026-03-06 20:45:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 20:45:26] ANSI_COLOR="0;31"
[2026-03-06 20:45:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 20:45:26] HOME_URL="https://www.centos.org/"
[2026-03-06 20:45:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 20:45:26] 
[2026-03-06 20:45:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 20:45:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 20:45:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 20:45:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 20:45:26] 
[2026-03-06 20:45:26] 2026-03-06 19:42:17,782 | INFO     | **************************************
[2026-03-06 20:45:26] 2026-03-06 19:42:18,284 | INFO     | executing command: df -mP /var/lib/boinc/var/slot52/slots/0
[2026-03-06 20:45:26] 2026-03-06 19:42:18,303 | INFO     | sufficient remaining disk space (27887927296 B)
[2026-03-06 20:45:26] 2026-03-06 19:42:18,304 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 20:45:26] 2026-03-06 19:42:18,304 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 20:45:26] 2026-03-06 19:42:18,304 | INFO     | update_server=False
[2026-03-06 20:45:26] 2026-03-06 19:42:18,304 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 20:45:26] 2026-03-06 19:42:18,304 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 20:45:26] 2026-03-06 19:42:18,305 | INFO     | aborting loop
[2026-03-06 20:45:26] 2026-03-06 19:42:18,879 | INFO     | all data control threads have been joined
[2026-03-06 20:45:26] 2026-03-06 19:42:18,893 | INFO     | all payload control threads have been joined
[2026-03-06 20:45:26] 2026-03-06 19:42:19,094 | INFO     | all job control threads have been joined
[2026-03-06 20:45:26] 2026-03-06 19:42:19,309 | INFO     | [job] retrieve thread has finished
[2026-03-06 20:45:26] 2026-03-06 19:42:19,310 | INFO     | [job] job monitor thread has finished
[2026-03-06 20:45:26] 2026-03-06 19:42:19,589 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 20:45:26] 2026-03-06 19:42:19,696 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 20:45:26] 2026-03-06 19:42:19,801 | INFO     | [data] copytool_in thread has finished
[2026-03-06 20:45:26] 2026-03-06 19:42:19,884 | INFO     | [data] control thread has finished
[2026-03-06 20:45:26] 2026-03-06 19:42:19,898 | INFO     | [payload] control thread has finished
[2026-03-06 20:45:26] 2026-03-06 19:42:20,099 | INFO     | [job] control thread has finished
[2026-03-06 20:45:26] 2026-03-06 19:42:20,285 | INFO     | [payload] validate_post thread has finished
[2026-03-06 20:45:26] 2026-03-06 19:42:20,562 | INFO     | [payload] failed_post thread has finished
[2026-03-06 20:45:26] 2026-03-06 19:42:20,586 | INFO     | [job] validate thread has finished
[2026-03-06 20:45:26] 2026-03-06 19:42:20,676 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 20:45:26] 2026-03-06 19:42:20,706 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 20:45:26] 2026-03-06 19:42:21,159 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 20:45:26] 2026-03-06 19:42:21,238 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 20:45:26] 2026-03-06 19:42:21,697 | INFO     | [data] copytool_out thread has finished
[2026-03-06 20:45:26] 2026-03-06 19:42:22,163 | INFO     | [job] queue monitor thread has finished
[2026-03-06 20:45:26] 2026-03-06 19:42:25,243 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 20:45:26] 2026-03-06 19:42:28,736 | INFO     | job.realtimelogging is not enabled
[2026-03-06 20:45:26] 2026-03-06 19:42:29,741 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 20:45:26] 2026-03-06 19:42:48,635 | INFO     | PID=4069528 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 20:45:26] 2026-03-06 19:42:48,635 | INFO     | .. there are 11 such processes running
[2026-03-06 20:45:26] 2026-03-06 19:42:48,636 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 20:45:26] 2026-03-06 19:42:48,636 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 20:45:26] 2026-03-06 19:42:48,636 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 20:45:26] 2026-03-06 19:42:55,350 | INFO     | [monitor] cgroup control has ended
[2026-03-06 20:45:26] 2026-03-06 19:42:56,565 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23307038025536)>', '<ExcThread(monitor, started 23306796537600)>']
[2026-03-06 20:45:26] 2026-03-06 19:42:56,670 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 20:45:26] 2026-03-06 19:42:56,670 | INFO     | [monitor] control thread has ended
[2026-03-06 20:45:26] 2026-03-06 19:43:01,590 | INFO     | all workflow threads have been joined
[2026-03-06 20:45:26] 2026-03-06 19:43:01,590 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 20:45:26] 2026-03-06 19:43:01,590 | INFO     | traces error code: 0
[2026-03-06 20:45:26] 2026-03-06 19:43:01,590 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 20:45:26] 2026-03-06 19:43:01,739 [wrapper] ==== pilot stdout END ====
[2026-03-06 20:45:26] 2026-03-06 19:43:01,742 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 20:45:26] 2026-03-06 19:43:01,744 [wrapper] pilotpid: 4069528
[2026-03-06 20:45:26] 2026-03-06 19:43:01,747 [wrapper] Pilot exit status: 0
[2026-03-06 20:45:26] 2026-03-06 19:43:01,757 [wrapper] pandaids: 7038764959
[2026-03-06 20:45:26] 2026-03-06 19:43:01,839 [wrapper] cleanup supervisor_pilot  103604 4069530
[2026-03-06 20:45:26] 2026-03-06 19:43:01,842 [wrapper] Test setup, not cleaning
[2026-03-06 20:45:26] 2026-03-06 19:43:01,848 [wrapper] apfmon messages muted
[2026-03-06 20:45:26] 2026-03-06 19:43:01,852 [wrapper] ==== wrapper stdout END ====
[2026-03-06 20:45:26] 2026-03-06 19:43:01,854 [wrapper] ==== wrapper stderr END ====
[2026-03-06 20:45:26]  *** Error codes and diagnostics ***
[2026-03-06 20:45:26]     "exeErrorCode": 0,
[2026-03-06 20:45:26]     "exeErrorDiag": "",
[2026-03-06 20:45:26]     "pilotErrorCode": 0,
[2026-03-06 20:45:26]     "pilotErrorDiag": "",
[2026-03-06 20:45:26]  *** Listing of results directory ***
[2026-03-06 20:45:26] total 616348
[2026-03-06 20:45:26] -rw-r--r--. 1 boinc boinc    584627 Mar  5 22:14 pilot3.tar.gz
[2026-03-06 20:45:26] -rwx------. 1 boinc boinc     36322 Mar  5 22:18 runpilot2-wrapper.sh
[2026-03-06 20:45:26] -rw-r--r--. 1 boinc boinc      5111 Mar  5 22:19 queuedata.json
[2026-03-06 20:45:26] -rw-r--r--. 1 boinc boinc       100 Mar  6 17:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 20:45:26] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 17:39 run_atlas
[2026-03-06 20:45:26] -rw-r--r--. 1 boinc boinc       105 Mar  6 17:39 job.xml
[2026-03-06 20:45:26] -rw-r--r--. 1 boinc boinc      6560 Mar  6 17:39 init_data.xml
[2026-03-06 20:45:26] -rw-r--r--. 2 boinc boinc 444215599 Mar  6 17:39 EVNT.46701403._000236.pool.root.1
[2026-03-06 20:45:26] -rw-r--r--. 2 boinc boinc     15845 Mar  6 17:39 start_atlas.sh
[2026-03-06 20:45:26] drwxrwx--x. 2 boinc boinc      4096 Mar  6 17:39 shared
[2026-03-06 20:45:26] -rw-r--r--. 2 boinc boinc    597953 Mar  6 17:39 input.tar.gz
[2026-03-06 20:45:26] -rw-r--r--. 1 boinc boinc         0 Mar  6 17:39 boinc_lockfile
[2026-03-06 20:45:26] -rw-r--r--. 1 boinc boinc      2564 Mar  6 17:39 pandaJob.out
[2026-03-06 20:45:26] -rw-------. 1 boinc boinc    999186 Mar  6 17:39 agis_schedconf.cvmfs.json
[2026-03-06 20:45:26] -rw-------. 1 boinc boinc       452 Mar  6 17:39 workernode_map.json
[2026-03-06 20:45:26] drwx------. 5 boinc boinc      4096 Mar  6 17:39 pilot3
[2026-03-06 20:45:26] -rw-r--r--. 1 boinc boinc       529 Mar  6 20:41 boinc_task_state.xml
[2026-03-06 20:45:26] -rw-------. 1 boinc boinc 179108388 Mar  6 20:41 HITS.48955006._011794.pool.root.1
[2026-03-06 20:45:26] -rw-------. 1 boinc boinc      1033 Mar  6 20:42 memory_monitor_summary.json
[2026-03-06 20:45:26] -rw-------. 1 boinc boinc   1521291 Mar  6 20:42 agis_ddmendpoints.agis.ALL.json
[2026-03-06 20:45:26] -rw-------. 1 boinc boinc    390047 Mar  6 20:42 log.48955006._011794.job.log.tgz.1
[2026-03-06 20:45:26] -rw-------. 1 boinc boinc      6405 Mar  6 20:42 heartbeat.json
[2026-03-06 20:45:26] -rw-------. 1 boinc boinc        95 Mar  6 20:42 pilot_heartbeat.json
[2026-03-06 20:45:26] -rw-------. 1 boinc boinc      4901 Mar  6 20:43 pilotlog.txt
[2026-03-06 20:45:26] -rw-------. 1 boinc boinc   1545992 Mar  6 20:43 log.48955006._011794.job.log.1
[2026-03-06 20:45:26] -rw-------. 1 boinc boinc       357 Mar  6 20:43 output.list
[2026-03-06 20:45:26] -rw-r--r--. 1 boinc boinc       620 Mar  6 20:43 runtime_log
[2026-03-06 20:45:26] -rw-------. 1 boinc boinc   1955840 Mar  6 20:43 result.tar.gz
[2026-03-06 20:45:26] -rw-r--r--. 1 boinc boinc      9205 Mar  6 20:43 runtime_log.err
[2026-03-06 20:45:26] -rw-------. 1 boinc boinc       665 Mar  6 20:43 cL2MDmXGVI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmL0MLDmoLMzFo.diag
[2026-03-06 20:45:26] -rw-r--r--. 1 boinc boinc        26 Mar  6 20:45 wrapper_checkpoint.txt
[2026-03-06 20:45:26] -rw-r--r--. 1 boinc boinc      8192 Mar  6 20:45 boinc_mmap_file
[2026-03-06 20:45:26] -rw-r--r--. 1 boinc boinc     20911 Mar  6 20:45 stderr.txt
[2026-03-06 20:45:26] HITS file was successfully produced:
[2026-03-06 20:45:26] -rw-------. 1 boinc boinc 179108388 Mar  6 20:41 shared/HITS.pool.root.1
[2026-03-06 20:45:26]  *** Contents of shared directory: ***
[2026-03-06 20:45:26] total 611240
[2026-03-06 20:45:26] -rw-r--r--. 2 boinc boinc 444215599 Mar  6 17:39 ATLAS.root_0
[2026-03-06 20:45:26] -rw-r--r--. 2 boinc boinc     15845 Mar  6 17:39 start_atlas.sh
[2026-03-06 20:45:26] -rw-r--r--. 2 boinc boinc    597953 Mar  6 17:39 input.tar.gz
[2026-03-06 20:45:26] -rw-------. 1 boinc boinc 179108388 Mar  6 20:41 HITS.pool.root.1
[2026-03-06 20:45:26] -rw-------. 1 boinc boinc   1955840 Mar  6 20:43 result.tar.gz
20:45:28 (4058252): run_atlas exited; CPU time 41682.704033
20:45:28 (4058252): called boinc_finish(0)

</stderr_txt>
]]>

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