Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
01:35:56 (1670827): wrapper (7.7.26015): starting
01:35:56 (1670827): wrapper: running run_atlas (--nthreads 5)
[2026-03-06 01:35:56] Arguments: --nthreads 5
[2026-03-06 01:35:56] Threads: 5
[2026-03-06 01:35:56] Checking for CVMFS
[2026-03-06 01:35:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 01:38:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 01:38:22] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 01:38:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 01:38:32] 2.11.0.0 919232 12424 98000 156947 2 188 2182635 4096001 6454 130560 22 28016841 99.996 450019 332 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2026-03-06 01:38:32] CVMFS is ok
[2026-03-06 01:38:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 01:38:32] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-06 01:38:32] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-06 01:38:32] Further information can be found at the LHC@home message board.
[2026-03-06 01:38:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 01:38:32] Checking for apptainer binary...
[2026-03-06 01:38:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-06 01:38:32] Running /usr/bin/apptainer --version
[2026-03-06 01:38:32] apptainer version 1.4.5
[2026-03-06 01:38:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 01:38:32] x32-linux4
[2026-03-06 01:38:32] apptainer works
[2026-03-06 01:38:32] Set ATHENA_PROC_NUMBER=5
[2026-03-06 01:38:32] Set ATHENA_CORE_NUMBER=5
[2026-03-06 01:38:32] Starting ATLAS job with PandaID=7038714911
[2026-03-06 01:38:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 01:42:52]  *** The last 200 lines of the pilot log: ***
[2026-03-06 01:42:52] 2026-03-06 06:42:19,460 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 01:42:52] 2026-03-06 06:42:19,460 | WARNING  | found no stored workdir sizes
[2026-03-06 01:42:52] 2026-03-06 06:42:19,460 | INFO     | will not add max space = 0 B to job metrics
[2026-03-06 01:42:52] 2026-03-06 06:42:19,460 | WARNING  | wrong length of table data, x=[1772779198.0], y=[789.0] (must be same and length>=4)
[2026-03-06 01:42:52] 2026-03-06 06:42:19,460 | INFO     | could have reported an average CPU frequency of 3955 MHz (4 samples)
[2026-03-06 01:42:52] 2026-03-06 06:42:19,460 | INFO     | ..............................
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . Timing measurements:
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . get job = 0 s
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . initial setup = 13 s
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . payload setup = 10 s
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . stage-in = 0 s
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . payload execution = 29 s
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . stage-out = 0 s
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . log creation = 0 s
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | ..............................
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/3/PanDA_Pilot-7038714911/pilotlog.txt
[2026-03-06 01:42:52] 2026-03-06 06:42:19,486 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-06 01:42:52] - Log from pilotlog.txt -
[2026-03-06 01:42:52] 2026-03-06 06:42:19,459 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 01:42:52] 2026-03-06 06:42:19,459 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 01:42:52] 2026-03-06 06:42:19,460 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 01:42:52] 2026-03-06 06:42:19,460 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 01:42:52] 2026-03-06 06:42:19,460 | WARNING  | found no stored workdir sizes
[2026-03-06 01:42:52] 2026-03-06 06:42:19,460 | INFO     | will not add max space = 0 B to job metrics
[2026-03-06 01:42:52] 2026-03-06 06:42:19,460 | WARNING  | wrong length of table data, x=[1772779198.0], y=[789.0] (must be same and length>=4)
[2026-03-06 01:42:52] 2026-03-06 06:42:19,460 | INFO     | could have reported an average CPU frequency of 3955 MHz (4 samples)
[2026-03-06 01:42:52] 2026-03-06 06:42:19,460 | INFO     | ..............................
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . Timing measurements:
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . get job = 0 s
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . initial setup = 13 s
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . payload setup = 10 s
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . stage-in = 0 s
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . payload execution = 29 s
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . stage-out = 0 s
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . log creation = 0 s
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | ..............................
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/3/PanDA_Pilot-7038714911/pilotlog.txt
[2026-03-06 01:42:52] 2026-03-06 06:42:19,486 | WARNING  | 
[2026-03-06 01:42:52] [begin log extracts]
[2026-03-06 01:42:52] - Log from pilotlog.txt -
[2026-03-06 01:42:52] 2026-03-06 06:42:19,459 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 01:42:52] 2026-03-06 06:42:19,459 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 01:42:52] 2026-03-06 06:42:19,460 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 01:42:52] 2026-03-06 06:42:19,460 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 01:42:52] 2026-03-06 06:42:19,460 | WARNING  | found no stored workdir sizes
[2026-03-06 01:42:52] 2026-03-06 06:42:19,460 | INFO     | will not add max space = 0 B to job metrics
[2026-03-06 01:42:52] 2026-03-06 06:42:19,460 | WARNING  | wrong length of table data, x=[1772779198.0], y=[789.0] (must be same and length>=4)
[2026-03-06 01:42:52] 2026-03-06 06:42:19,460 | INFO     | could have reported an average CPU frequency of 3955 MHz (4 samples)
[2026-03-06 01:42:52] 2026-03-06 06:42:19,460 | INFO     | ..............................
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . Timing measurements:
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . get job = 0 s
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . initial setup = 13 s
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . payload setup = 10 s
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . stage-in = 0 s
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . payload execution = 29 s
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . stage-out = 0 s
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | . log creation = 0 s
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | ..............................
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 01:42:52] 2026-03-06 06:42:19,461 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/3/PanDA_Pilot-7038714911/pilotlog.txt
[2026-03-06 01:42:52] [end log extracts]
[2026-03-06 01:42:52] 2026-03-06 06:42:19,486 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-06 01:42:52] 2026-03-06 06:42:19,487 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-06 01:42:52] 2026-03-06 06:42:19,579 | INFO     | 
[2026-03-06 01:42:52] 2026-03-06 06:42:19,579 | INFO     | job summary report
[2026-03-06 01:42:52] 2026-03-06 06:42:19,579 | INFO     | --------------------------------------------------
[2026-03-06 01:42:52] 2026-03-06 06:42:19,579 | INFO     | PanDA job id: 7038714911
[2026-03-06 01:42:52] 2026-03-06 06:42:19,579 | INFO     | task id: 48955006
[2026-03-06 01:42:52] 2026-03-06 06:42:19,579 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-06 06:40:14,098 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-06 01:42:52] 2026-03-06 06:42:19,579 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 01:42:52] 2026-03-06 06:42:19,579 | INFO     | pilot state: failed 
[2026-03-06 01:42:52] 2026-03-06 06:42:19,579 | INFO     | transexitcode: 65
[2026-03-06 01:42:52] 2026-03-06 06:42:19,579 | INFO     | exeerrorcode: 65
[2026-03-06 01:42:52] 2026-03-06 06:42:19,579 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-06 01:42:52] 2026-03-06 06:42:19,579 | INFO     | exitcode: 65
[2026-03-06 01:42:52] 2026-03-06 06:42:19,579 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-06 01:42:52] 2026-03-06 06:42:19,579 | INFO     | cpuconsumptiontime: 13 s
[2026-03-06 01:42:52] 2026-03-06 06:42:19,579 | INFO     | nevents: 0
[2026-03-06 01:42:52] 2026-03-06 06:42:19,579 | INFO     | neventsw: 0
[2026-03-06 01:42:52] 2026-03-06 06:42:19,580 | INFO     | pid: 1679616
[2026-03-06 01:42:52] 2026-03-06 06:42:19,580 | INFO     | pgrp: 1679616
[2026-03-06 01:42:52] 2026-03-06 06:42:19,580 | INFO     | corecount: 5
[2026-03-06 01:42:52] 2026-03-06 06:42:19,580 | INFO     | event service: False
[2026-03-06 01:42:52] 2026-03-06 06:42:19,580 | INFO     | sizes: {0: 2295407, 1: 2295868, 11: 2295868, 43: 2319132, 45: 2323462, 161: 2323600}
[2026-03-06 01:42:52] 2026-03-06 06:42:19,580 | INFO     | --------------------------------------------------
[2026-03-06 01:42:52] 2026-03-06 06:42:19,580 | INFO     | 
[2026-03-06 01:42:52] 2026-03-06 06:42:19,580 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2026-03-06 01:42:52] 2026-03-06 06:42:19,611 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 01:42:52] 2026-03-06 06:42:19,612 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 01:42:52] 2026-03-06 06:42:19,612 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 01:42:52] 2026-03-06 06:42:19,612 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 01:42:52] 2026-03-06 06:42:19,612 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 01:42:52] 2026-03-06 06:42:19,612 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 01:42:52] 2026-03-06 06:42:19,612 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 01:42:52] 2026-03-06 06:42:19,612 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 01:42:52] 2026-03-06 06:42:19,612 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 01:42:52] 2026-03-06 06:42:19,612 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 01:42:52] 2026-03-06 06:42:19,612 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 01:42:52] 2026-03-06 06:42:19,612 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 01:42:52] 2026-03-06 06:42:19,612 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 01:42:52] 2026-03-06 06:42:19,613 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 01:42:52] 2026-03-06 06:42:19,613 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 01:42:52] 2026-03-06 06:42:19,613 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 01:42:52] 2026-03-06 06:42:19,613 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 01:42:52] 2026-03-06 06:42:19,613 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 01:42:52] 2026-03-06 06:42:19,613 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 01:42:52] 2026-03-06 06:42:19,613 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 01:42:52] 2026-03-06 06:42:19,613 | INFO     | job 7038714911 has completed (purged errors)
[2026-03-06 01:42:52] 2026-03-06 06:42:19,613 | INFO     | overall cleanup function is called
[2026-03-06 01:42:52] 2026-03-06 06:42:20,622 | INFO     | --- collectZombieJob: --- 10, [1679616]
[2026-03-06 01:42:52] 2026-03-06 06:42:20,622 | INFO     | zombie collector waiting for pid 1679616
[2026-03-06 01:42:52] 2026-03-06 06:42:20,622 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 01:42:52] 2026-03-06 06:42:20,622 | INFO     | collected zombie processes
[2026-03-06 01:42:52] 2026-03-06 06:42:20,622 | INFO     | will attempt to kill all subprocesses of pid=1679616
[2026-03-06 01:42:52] 2026-03-06 06:42:20,886 | INFO     | process IDs to be killed: [1679616] (in reverse order)
[2026-03-06 01:42:52] 2026-03-06 06:42:20,972 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 01:42:52] 2026-03-06 06:42:20,972 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 01:42:52] 2026-03-06 06:42:20,980 | INFO     | did not find any defunct processes belonging to 1679616
[2026-03-06 01:42:52] 2026-03-06 06:42:20,989 | INFO     | did not find any defunct processes belonging to 1679616
[2026-03-06 01:42:52] 2026-03-06 06:42:20,990 | INFO     | ready for new job
[2026-03-06 01:42:52] 2026-03-06 06:42:20,990 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 01:42:52] 2026-03-06 06:42:20,991 | INFO     | **************************************
[2026-03-06 01:42:52] 2026-03-06 06:42:20,991 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 01:42:52] 2026-03-06 06:42:20,991 | INFO     | **************************************
[2026-03-06 01:42:52] 2026-03-06 06:42:20,994 | INFO     | 
[2026-03-06 01:42:52] 2026-03-06 06:42:20,995 | INFO     | architecture information:
[2026-03-06 01:42:52] 2026-03-06 06:42:20,996 | INFO     | executing command: cat /etc/os-release
[2026-03-06 01:42:52] 2026-03-06 06:42:21,024 | INFO     | cat /etc/os-release:
[2026-03-06 01:42:52] NAME="CentOS Linux"
[2026-03-06 01:42:52] VERSION="7 (Core)"
[2026-03-06 01:42:52] ID="centos"
[2026-03-06 01:42:52] ID_LIKE="rhel fedora"
[2026-03-06 01:42:52] VERSION_ID="7"
[2026-03-06 01:42:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 01:42:52] ANSI_COLOR="0;31"
[2026-03-06 01:42:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 01:42:52] HOME_URL="https://www.centos.org/"
[2026-03-06 01:42:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 01:42:52] 
[2026-03-06 01:42:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 01:42:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 01:42:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 01:42:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 01:42:52] 
[2026-03-06 01:42:52] 2026-03-06 06:42:21,024 | INFO     | **************************************
[2026-03-06 01:42:52] 2026-03-06 06:42:21,526 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2026-03-06 01:42:52] 2026-03-06 06:42:21,547 | INFO     | sufficient remaining disk space (133992284160 B)
[2026-03-06 01:42:52] 2026-03-06 06:42:21,547 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 01:42:52] 2026-03-06 06:42:21,547 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 01:42:52] 2026-03-06 06:42:21,547 | INFO     | update_server=False
[2026-03-06 01:42:52] 2026-03-06 06:42:21,547 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 01:42:52] 2026-03-06 06:42:21,551 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 01:42:52] 2026-03-06 06:42:21,551 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 01:42:52] 2026-03-06 06:42:21,551 | INFO     | aborting loop
[2026-03-06 01:42:52] 2026-03-06 06:42:21,963 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 01:42:52] 2026-03-06 06:42:22,455 | INFO     | all data control threads have been joined
[2026-03-06 01:42:52] 2026-03-06 06:42:22,556 | INFO     | [job] job monitor thread has finished
[2026-03-06 01:42:52] 2026-03-06 06:42:22,556 | INFO     | [job] retrieve thread has finished
[2026-03-06 01:42:52] 2026-03-06 06:42:22,559 | INFO     | [job] queue monitor thread has finished
[2026-03-06 01:42:52] 2026-03-06 06:42:22,592 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 01:42:52] 2026-03-06 06:42:22,750 | INFO     | all job control threads have been joined
[2026-03-06 01:42:52] 2026-03-06 06:42:22,938 | INFO     | [job] validate thread has finished
[2026-03-06 01:42:52] 2026-03-06 06:42:23,022 | INFO     | all payload control threads have been joined
[2026-03-06 01:42:52] 2026-03-06 06:42:23,026 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 01:42:52] 2026-03-06 06:42:23,222 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 01:42:52] 2026-03-06 06:42:23,223 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 01:42:52] 2026-03-06 06:42:23,397 | INFO     | [payload] failed_post thread has finished
[2026-03-06 01:42:52] 2026-03-06 06:42:23,460 | INFO     | [data] control thread has finished
[2026-03-06 01:42:52] 2026-03-06 06:42:23,473 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 01:42:52] 2026-03-06 06:42:23,757 | INFO     | [job] control thread has finished
[2026-03-06 01:42:52] 2026-03-06 06:42:23,815 | INFO     | [data] copytool_in thread has finished
[2026-03-06 01:42:52] 2026-03-06 06:42:23,968 | INFO     | [data] copytool_out thread has finished
[2026-03-06 01:42:52] 2026-03-06 06:42:24,027 | INFO     | [payload] control thread has finished
[2026-03-06 01:42:52] 2026-03-06 06:42:24,148 | INFO     | [payload] validate_post thread has finished
[2026-03-06 01:42:52] 2026-03-06 06:42:26,597 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 01:42:52] 2026-03-06 06:42:27,033 | INFO     | [monitor] cgroup control has ended
[2026-03-06 01:42:52] 2026-03-06 06:42:28,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136941172684608)>', '<ExcThread(monitor, started 136940829517568)>']
[2026-03-06 01:42:52] 2026-03-06 06:42:33,388 | INFO     | all workflow threads have been joined
[2026-03-06 01:42:52] 2026-03-06 06:42:33,388 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 01:42:52] 2026-03-06 06:42:33,388 | INFO     | traces error code: 0
[2026-03-06 01:42:52] 2026-03-06 06:42:33,388 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 01:42:52] 2026-03-06 06:42:52,126 | INFO     | PID=1675046 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 01:42:52] 2026-03-06 06:42:52,126 | INFO     | .. there are 8 such processes running
[2026-03-06 01:42:52] 2026-03-06 06:42:52,126 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 01:42:52] 2026-03-06 06:42:52,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 01:42:52] 2026-03-06 06:42:52,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 01:42:52] 2026-03-06 06:42:52,126 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 01:42:52] 2026-03-06 06:42:52,126 | INFO     | [monitor] control thread has ended
[2026-03-06 01:42:52] 2026-03-06 06:42:52,288 [wrapper] ==== pilot stdout END ====
[2026-03-06 01:42:52] 2026-03-06 06:42:52,296 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 01:42:52] 2026-03-06 06:42:52,301 [wrapper] pilotpid: 1675046
[2026-03-06 01:42:52] 2026-03-06 06:42:52,304 [wrapper] Pilot exit status: 0
[2026-03-06 01:42:52] 2026-03-06 06:42:52,324 [wrapper] pandaids: 7038714911
[2026-03-06 01:42:52] 2026-03-06 06:42:52,396 [wrapper] cleanup supervisor_pilot 1675052 1675047
[2026-03-06 01:42:52] 2026-03-06 06:42:52,400 [wrapper] Test setup, not cleaning
[2026-03-06 01:42:52] 2026-03-06 06:42:52,404 [wrapper] apfmon messages muted
[2026-03-06 01:42:52] 2026-03-06 06:42:52,408 [wrapper] ==== wrapper stdout END ====
[2026-03-06 01:42:52] 2026-03-06 06:42:52,415 [wrapper] ==== wrapper stderr END ====
[2026-03-06 01:42:52]  *** Error codes and diagnostics ***
[2026-03-06 01:42:52]     "exeErrorCode": 65,
[2026-03-06 01:42:52]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-06 01:42:52]     "pilotErrorCode": 1305,
[2026-03-06 01:42:52]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-06 01:42:52]  *** Listing of results directory ***
[2026-03-06 01:42:52] total 432308
[2026-03-06 01:42:52] -rw-r--r-- 1 boinc boinc    584627 Mar  5 14:32 pilot3.tar.gz
[2026-03-06 01:42:52] -rwx------ 1 boinc boinc     36322 Mar  5 14:33 runpilot2-wrapper.sh
[2026-03-06 01:42:52] -rw-r--r-- 1 boinc boinc      5111 Mar  5 14:34 queuedata.json
[2026-03-06 01:42:52] -rw-r--r-- 1 boinc boinc       100 Mar  6 01:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 01:42:52] -rwxr-xr-x 1 boinc boinc      7986 Mar  6 01:35 run_atlas
[2026-03-06 01:42:52] -rw-r--r-- 1 boinc boinc       105 Mar  6 01:35 job.xml
[2026-03-06 01:42:52] -rw-r--r-- 2 boinc boinc 438793610 Mar  6 01:35 EVNT.46701403._000214.pool.root.1
[2026-03-06 01:42:52] -rw-r--r-- 2 boinc boinc     15845 Mar  6 01:35 start_atlas.sh
[2026-03-06 01:42:52] drwxrwx--x 2 boinc boinc      4096 Mar  6 01:35 shared
[2026-03-06 01:42:52] -rw-r--r-- 2 boinc boinc    597957 Mar  6 01:35 input.tar.gz
[2026-03-06 01:42:52] -rw-r--r-- 1 boinc boinc      9742 Mar  6 01:35 init_data.xml
[2026-03-06 01:42:52] -rw-r--r-- 1 boinc boinc         0 Mar  6 01:35 boinc_setup_complete
[2026-03-06 01:42:52] -rw-r--r-- 1 boinc boinc         0 Mar  6 01:35 boinc_lockfile
[2026-03-06 01:42:52] -rw-r--r-- 1 boinc boinc      2564 Mar  6 01:38 pandaJob.out
[2026-03-06 01:42:52] -rw------- 1 boinc boinc    998544 Mar  6 01:39 agis_schedconf.cvmfs.json
[2026-03-06 01:42:52] -rw------- 1 boinc boinc         0 Mar  6 01:39 agis_ddmendpoints.agis.ALL.json
[2026-03-06 01:42:52] -rw------- 1 boinc boinc   1267202 Mar  6 01:39 cric_ddmendpoints.json
[2026-03-06 01:42:52] -rw------- 1 boinc boinc       424 Mar  6 01:39 workernode_map.json
[2026-03-06 01:42:52] drwx------ 5 boinc boinc      4096 Mar  6 01:39 pilot3
[2026-03-06 01:42:52] -rw-r--r-- 1 boinc boinc       523 Mar  6 01:40 boinc_task_state.xml
[2026-03-06 01:42:52] -rw------- 1 boinc boinc       934 Mar  6 01:40 memory_monitor_summary.json
[2026-03-06 01:42:52] -rw------- 1 boinc boinc     20561 Mar  6 01:40 log.48955006._010683.job.log.tgz.1
[2026-03-06 01:42:52] -rw------- 1 boinc boinc        95 Mar  6 01:42 pilot_heartbeat.json
[2026-03-06 01:42:52] -rw------- 1 boinc boinc      6929 Mar  6 01:42 heartbeat.json
[2026-03-06 01:42:52] -rw-r--r-- 1 boinc boinc        22 Mar  6 01:42 wrapper_checkpoint.txt
[2026-03-06 01:42:52] -rw-r--r-- 1 boinc boinc      8192 Mar  6 01:42 boinc_mmap_file
[2026-03-06 01:42:52] -rw------- 1 boinc boinc       822 Mar  6 01:42 pilotlog.txt
[2026-03-06 01:42:52] -rw------- 1 boinc boinc     83243 Mar  6 01:42 log.48955006._010683.job.log.1
[2026-03-06 01:42:52] -rw------- 1 boinc boinc       188 Mar  6 01:42 output.list
[2026-03-06 01:42:52] -rw-r--r-- 1 boinc boinc       620 Mar  6 01:42 runtime_log
[2026-03-06 01:42:52] -rw------- 1 boinc boinc    122880 Mar  6 01:42 result.tar.gz
[2026-03-06 01:42:52] -rw-r--r-- 1 boinc boinc      8738 Mar  6 01:42 runtime_log.err
[2026-03-06 01:42:52] -rw------- 1 boinc boinc       631 Mar  6 01:42 P6LLDmBdTI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmRhMLDmyFwAVn.diag
[2026-03-06 01:42:52] -rw-r--r-- 1 boinc boinc     21728 Mar  6 01:42 stderr.txt
[2026-03-06 01:42:52] No HITS result produced
[2026-03-06 01:42:52]  *** Contents of shared directory: ***
[2026-03-06 01:42:52] total 429236
[2026-03-06 01:42:52] -rw-r--r-- 2 boinc boinc 438793610 Mar  6 01:35 ATLAS.root_0
[2026-03-06 01:42:52] -rw-r--r-- 2 boinc boinc     15845 Mar  6 01:35 start_atlas.sh
[2026-03-06 01:42:52] -rw-r--r-- 2 boinc boinc    597957 Mar  6 01:35 input.tar.gz
[2026-03-06 01:42:52] -rw------- 1 boinc boinc    122880 Mar  6 01:42 result.tar.gz
01:42:54 (1670827): run_atlas exited; CPU time 17.647585
01:42:54 (1670827): called boinc_finish(0)

</stderr_txt>
]]>

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