Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
11:01:38 (44567): wrapper (7.7.26015): starting
11:01:38 (44567): wrapper: running run_atlas (--nthreads 8)
[2026-03-06 11:01:38] Arguments: --nthreads 8
[2026-03-06 11:01:38] Threads: 8
[2026-03-06 11:01:38] Checking for CVMFS
[2026-03-06 11:01:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 11:01:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 11:01:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 11:01:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 11:01:41] 2.13.3.0 4293 181 47132 156937 1 50 2176615 4096001 0 130560 0 120266 99.968 9885 621 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.50.212:3128 1
[2026-03-06 11:01:41] CVMFS is ok
[2026-03-06 11:01:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 11:01:41] Checking for apptainer binary...
[2026-03-06 11:01:41] apptainer is not installed, using version from CVMFS
[2026-03-06 11:01:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 11:01:42] BoincUbuntu
[2026-03-06 11:01:42] apptainer works
[2026-03-06 11:01:42] Set ATHENA_PROC_NUMBER=8
[2026-03-06 11:01:42] Set ATHENA_CORE_NUMBER=8
[2026-03-06 11:01:43] Starting ATLAS job with PandaID=7038693894
[2026-03-06 11:01:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 12:01:33]  *** The last 200 lines of the pilot log: ***
[2026-03-06 12:01:33]  is_tar=False
[2026-03-06 12:01:33]  lfn=log.48955006._009613.job.log.tgz.1
[2026-03-06 12:01:33]  mtime=0
[2026-03-06 12:01:33]  protocol_id=None
[2026-03-06 12:01:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-06 12:01:33]  replicas=None
[2026-03-06 12:01:33]  scope=mc23_13p6TeV
[2026-03-06 12:01:33]  status=None
[2026-03-06 12:01:33]  status_code=0
[2026-03-06 12:01:33]  storage_token=
[2026-03-06 12:01:33]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-7038693894/log.48955006._009613.job.log.tgz.1
[2026-03-06 12:01:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/78/log.48955006._009613.job.log.tgz.1
[2026-03-06 12:01:33]  workdir=None
[2026-03-06 12:01:33] ]
[2026-03-06 12:01:33] 2026-03-06 01:00:59,093 | INFO     | transferring file log.48955006._009613.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-7038693894/log.48955006._009613.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-03-06 12:01:33] 2026-03-06 01:00:59,093 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-7038693894/log.48955006._009613.job.log.tgz.1 /var/lib/boinc/slots/0/log.48955006._009613.job
[2026-03-06 12:01:33] 2026-03-06 01:00:59,134 | INFO     | adding to output.list: log.48955006._009613.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/78/log.48955006._009613.job.log.tg
[2026-03-06 12:01:33] 2026-03-06 01:00:59,134 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-06 12:01:33] 2026-03-06 01:00:59,134 | INFO     | summary of transferred files:
[2026-03-06 12:01:33] 2026-03-06 01:00:59,134 | INFO     |  -- lfn=log.48955006._009613.job.log.tgz.1, status_code=0, status=transferred
[2026-03-06 12:01:33] 2026-03-06 01:00:59,135 | INFO     | stage-out finished correctly
[2026-03-06 12:01:33] 2026-03-06 01:00:59,779 | INFO     | time since job start (3470s) is within the limit (349056.0s)
[2026-03-06 12:01:33] 2026-03-06 01:01:01,448 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-06 12:01:33] 2026-03-06 01:01:01,500 | INFO     | job 7038693894 has state=finished
[2026-03-06 12:01:33] 2026-03-06 01:01:01,502 | INFO     | preparing for final server update for job 7038693894 in state='finished'
[2026-03-06 12:01:33] 2026-03-06 01:01:01,502 | INFO     | reading metadata from: /var/lib/boinc/slots/0/PanDA_Pilot-7038693894/jobReport.json
[2026-03-06 12:01:33] 2026-03-06 01:01:01,505 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/0/workernode_map.json
[2026-03-06 12:01:33] 2026-03-06 01:01:01,506 | INFO     | this job has now completed (state=finished)
[2026-03-06 12:01:33] 2026-03-06 01:01:01,506 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-06 12:01:33] 2026-03-06 01:01:01,506 | INFO     | log transfer has been attempted: DONE
[2026-03-06 12:01:33] 2026-03-06 01:01:01,506 | INFO     | job 7038693894 has finished - writing final server update
[2026-03-06 12:01:33] 2026-03-06 01:01:01,507 | INFO     | total number of processed events: 400 (read)
[2026-03-06 12:01:33] 2026-03-06 01:01:01,511 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-7038693894/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 12:01:33] 2026-03-06 01:01:01,512 | INFO     | extracted standard info from prmon json
[2026-03-06 12:01:33] 2026-03-06 01:01:01,512 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 12:01:33] 2026-03-06 01:01:01,512 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 12:01:33] 2026-03-06 01:01:01,512 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 12:01:33] 2026-03-06 01:01:01,512 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 12:01:33] 2026-03-06 01:01:01,513 | INFO     | fitting pss+swap vs Time
[2026-03-06 12:01:33] 2026-03-06 01:01:01,514 | INFO     | sum of square deviations: 34879499.72727268
[2026-03-06 12:01:33] 2026-03-06 01:01:01,514 | INFO     | sum of deviations: 2605916814.318183
[2026-03-06 12:01:33] 2026-03-06 01:01:01,514 | INFO     | mean x: 1772757231.2272727
[2026-03-06 12:01:33] 2026-03-06 01:01:01,514 | INFO     | mean y: 2735030.0681818184
[2026-03-06 12:01:33] 2026-03-06 01:01:01,514 | INFO     | intersect: -132443484459.34535
[2026-03-06 12:01:33] 2026-03-06 01:01:01,514 | INFO     | chi2: 0.28713157852363763
[2026-03-06 12:01:33] 2026-03-06 01:01:01,515 | INFO     | current memory leak: 74.71 B/s (using 44 data points, chi2=0.29)
[2026-03-06 12:01:33] 2026-03-06 01:01:01,516 | INFO     | could have reported an average CPU frequency of 4000 MHz (5 samples)
[2026-03-06 12:01:33] 2026-03-06 01:01:01,516 | INFO     | ..............................
[2026-03-06 12:01:33] 2026-03-06 01:01:01,516 | INFO     | . Timing measurements:
[2026-03-06 12:01:33] 2026-03-06 01:01:01,516 | INFO     | . get job = 0 s
[2026-03-06 12:01:33] 2026-03-06 01:01:01,517 | INFO     | . initial setup = 18 s
[2026-03-06 12:01:33] 2026-03-06 01:01:01,517 | INFO     | . payload setup = 16 s
[2026-03-06 12:01:33] 2026-03-06 01:01:01,517 | INFO     | . stage-in = 0 s
[2026-03-06 12:01:33] 2026-03-06 01:01:01,518 | INFO     | . payload execution = 3437 s
[2026-03-06 12:01:33] 2026-03-06 01:01:01,518 | INFO     | . stage-out = 0 s
[2026-03-06 12:01:33] 2026-03-06 01:01:01,519 | INFO     | . log creation = 0 s
[2026-03-06 12:01:33] 2026-03-06 01:01:01,519 | INFO     | ..............................
[2026-03-06 12:01:33] 2026-03-06 01:01:01,571 | INFO     | 
[2026-03-06 12:01:33] 2026-03-06 01:01:01,571 | INFO     | job summary report
[2026-03-06 12:01:33] 2026-03-06 01:01:01,572 | INFO     | --------------------------------------------------
[2026-03-06 12:01:33] 2026-03-06 01:01:01,572 | INFO     | PanDA job id: 7038693894
[2026-03-06 12:01:33] 2026-03-06 01:01:01,572 | INFO     | task id: 48955006
[2026-03-06 12:01:33] 2026-03-06 01:01:01,573 | INFO     | errors: (none)
[2026-03-06 12:01:33] 2026-03-06 01:01:01,573 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 12:01:33] 2026-03-06 01:01:01,573 | INFO     | pilot state: finished 
[2026-03-06 12:01:33] 2026-03-06 01:01:01,574 | INFO     | transexitcode: 0
[2026-03-06 12:01:33] 2026-03-06 01:01:01,574 | INFO     | exeerrorcode: 0
[2026-03-06 12:01:33] 2026-03-06 01:01:01,574 | INFO     | exeerrordiag: 
[2026-03-06 12:01:33] 2026-03-06 01:01:01,574 | INFO     | exitcode: 0
[2026-03-06 12:01:33] 2026-03-06 01:01:01,574 | INFO     | exitmsg: OK
[2026-03-06 12:01:33] 2026-03-06 01:01:01,574 | INFO     | cpuconsumptiontime: 22713 s
[2026-03-06 12:01:33] 2026-03-06 01:01:01,575 | INFO     | nevents: 400
[2026-03-06 12:01:33] 2026-03-06 01:01:01,575 | INFO     | neventsw: 0
[2026-03-06 12:01:33] 2026-03-06 01:01:01,575 | INFO     | pid: 53055
[2026-03-06 12:01:33] 2026-03-06 01:01:01,575 | INFO     | pgrp: 53055
[2026-03-06 12:01:33] 2026-03-06 01:01:01,575 | INFO     | corecount: 8
[2026-03-06 12:01:33] 2026-03-06 01:01:01,575 | INFO     | event service: False
[2026-03-06 12:01:33] 2026-03-06 01:01:01,575 | INFO     | sizes: {0: 2295739, 1: 2295827, 11: 2295827, 3457: 2320856, 3458: 2329854, 3461: 2330264}
[2026-03-06 12:01:33] 2026-03-06 01:01:01,576 | INFO     | --------------------------------------------------
[2026-03-06 12:01:33] 2026-03-06 01:01:01,576 | INFO     | 
[2026-03-06 12:01:33] 2026-03-06 01:01:01,576 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-03-06 12:01:33] 2026-03-06 01:01:01,657 | WARNING  | process 53055 can no longer be monitored (due to stat problems) - aborting
[2026-03-06 12:01:33] 2026-03-06 01:01:01,658 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-7038693894/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 12:01:33] 2026-03-06 01:01:01,658 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-7038693894/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 12:01:33] 2026-03-06 01:01:01,659 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-06 12:01:33] 2026-03-06 01:01:01,659 | WARNING  | maxPSS not found in memory monitor output
[2026-03-06 12:01:33] 2026-03-06 01:01:01,676 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 12:01:33] 2026-03-06 01:01:01,676 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 12:01:33] 2026-03-06 01:01:01,677 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 12:01:33] 2026-03-06 01:01:01,677 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 12:01:33] 2026-03-06 01:01:01,677 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 12:01:33] 2026-03-06 01:01:01,677 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 12:01:33] 2026-03-06 01:01:01,677 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 12:01:33] 2026-03-06 01:01:01,677 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 12:01:33] 2026-03-06 01:01:01,677 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 12:01:33] 2026-03-06 01:01:01,677 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 12:01:33] 2026-03-06 01:01:01,677 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 12:01:33] 2026-03-06 01:01:01,677 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 12:01:33] 2026-03-06 01:01:01,677 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 12:01:33] 2026-03-06 01:01:01,678 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 12:01:33] 2026-03-06 01:01:01,678 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 12:01:33] 2026-03-06 01:01:01,678 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 12:01:33] 2026-03-06 01:01:01,678 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 12:01:33] 2026-03-06 01:01:01,678 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 12:01:33] 2026-03-06 01:01:01,678 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 12:01:33] 2026-03-06 01:01:01,678 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 12:01:33] 2026-03-06 01:01:01,679 | INFO     | job 7038693894 has completed (purged errors)
[2026-03-06 12:01:33] 2026-03-06 01:01:01,679 | INFO     | overall cleanup function is called
[2026-03-06 12:01:33] 2026-03-06 01:01:01,724 | INFO     | number of running child processes to parent process 53055: 1
[2026-03-06 12:01:33] 2026-03-06 01:01:01,724 | INFO     | maximum number of monitored processes: 6
[2026-03-06 12:01:33] 2026-03-06 01:01:01,724 | INFO     | aborting job monitoring since job object (job id=7038693894) has expired
[2026-03-06 12:01:33] 2026-03-06 01:01:02,697 | INFO     | --- collectZombieJob: --- 10, [53055]
[2026-03-06 12:01:33] 2026-03-06 01:01:02,697 | INFO     | zombie collector waiting for pid 53055
[2026-03-06 12:01:33] 2026-03-06 01:01:02,697 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 12:01:33] 2026-03-06 01:01:02,697 | INFO     | collected zombie processes
[2026-03-06 12:01:33] 2026-03-06 01:01:02,697 | INFO     | will attempt to kill all subprocesses of pid=53055
[2026-03-06 12:01:33] 2026-03-06 01:01:02,757 | INFO     | process IDs to be killed: [53055] (in reverse order)
[2026-03-06 12:01:33] 2026-03-06 01:01:02,876 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 12:01:33] 2026-03-06 01:01:02,876 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 12:01:33] 2026-03-06 01:01:02,878 | INFO     | did not find any defunct processes belonging to 53055
[2026-03-06 12:01:33] 2026-03-06 01:01:02,879 | INFO     | did not find any defunct processes belonging to 53055
[2026-03-06 12:01:33] 2026-03-06 01:01:02,879 | INFO     | ready for new job
[2026-03-06 12:01:33] 2026-03-06 01:01:02,879 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 12:01:33] 2026-03-06 01:01:02,880 | INFO     | **************************************
[2026-03-06 12:01:33] 2026-03-06 01:01:02,880 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 12:01:33] 2026-03-06 01:01:02,880 | INFO     | **************************************
[2026-03-06 12:01:33] 2026-03-06 01:01:02,880 | INFO     | 
[2026-03-06 12:01:33] 2026-03-06 01:01:02,881 | INFO     | pilot is running in a VM
[2026-03-06 12:01:33] 2026-03-06 01:01:02,881 | INFO     | architecture information:
[2026-03-06 12:01:33] 2026-03-06 01:01:02,882 | INFO     | executing command: cat /etc/os-release
[2026-03-06 12:01:33] 2026-03-06 01:01:02,914 | INFO     | cat /etc/os-release:
[2026-03-06 12:01:33] NAME="CentOS Linux"
[2026-03-06 12:01:33] VERSION="7 (Core)"
[2026-03-06 12:01:33] ID="centos"
[2026-03-06 12:01:33] ID_LIKE="rhel fedora"
[2026-03-06 12:01:33] VERSION_ID="7"
[2026-03-06 12:01:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 12:01:33] ANSI_COLOR="0;31"
[2026-03-06 12:01:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 12:01:33] HOME_URL="https://www.centos.org/"
[2026-03-06 12:01:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 12:01:33] 
[2026-03-06 12:01:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 12:01:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 12:01:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 12:01:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 12:01:33] 
[2026-03-06 12:01:33] 2026-03-06 01:01:02,914 | INFO     | **************************************
[2026-03-06 12:01:33] 2026-03-06 01:01:03,418 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-03-06 12:01:33] 2026-03-06 01:01:03,453 | INFO     | sufficient remaining disk space (89053462528 B)
[2026-03-06 12:01:33] 2026-03-06 01:01:03,453 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 12:01:33] 2026-03-06 01:01:03,453 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 12:01:33] 2026-03-06 01:01:03,453 | INFO     | update_server=False
[2026-03-06 12:01:33] 2026-03-06 01:01:03,453 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 12:01:33] 2026-03-06 01:01:03,454 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 12:01:33] 2026-03-06 01:01:03,454 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 12:01:33] 2026-03-06 01:01:03,454 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 12:01:33] 2026-03-06 01:01:03,455 | INFO     | aborting loop
[2026-03-06 12:01:33] 2026-03-06 01:01:03,987 | INFO     | all payload control threads have been joined
[2026-03-06 12:01:33] 2026-03-06 01:01:04,458 | INFO     | all job control threads have been joined
[2026-03-06 12:01:33] 2026-03-06 01:01:04,459 | INFO     | [job] retrieve thread has finished
[2026-03-06 12:01:33] 2026-03-06 01:01:04,460 | INFO     | [job] job monitor thread has finished
[2026-03-06 12:01:33] 2026-03-06 01:01:04,463 | INFO     | [job] queue monitor thread has finished
[2026-03-06 12:01:33] 2026-03-06 01:01:04,554 | INFO     | all data control threads have been joined
[2026-03-06 12:01:33] 2026-03-06 01:01:04,556 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 12:01:33] 2026-03-06 01:01:04,714 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 12:01:33] 2026-03-06 01:01:04,824 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 12:01:33] 2026-03-06 01:01:04,994 | INFO     | [payload] control thread has finished
[2026-03-06 12:01:33] 2026-03-06 01:01:05,046 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 12:01:33] 2026-03-06 01:01:05,047 | INFO     | [job] validate thread has finished
[2026-03-06 12:01:33] 2026-03-06 01:01:05,190 | INFO     | [data] copytool_in thread has finished
[2026-03-06 12:01:33] 2026-03-06 01:01:05,199 | INFO     | [payload] failed_post thread has finished
[2026-03-06 12:01:33] 2026-03-06 01:01:05,464 | INFO     | [job] control thread has finished
[2026-03-06 12:01:33] 2026-03-06 01:01:05,560 | INFO     | [data] control thread has finished
[2026-03-06 12:01:33] 2026-03-06 01:01:05,832 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 12:01:33] 2026-03-06 01:01:05,872 | INFO     | [payload] validate_post thread has finished
[2026-03-06 12:01:33] 2026-03-06 01:01:06,716 | INFO     | [data] copytool_out thread has finished
[2026-03-06 12:01:33] 2026-03-06 01:01:07,465 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 12:01:33] 2026-03-06 01:01:26,344 | INFO     | [monitor] cgroup control has ended
[2026-03-06 12:01:33] 2026-03-06 01:01:27,034 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125551236720448)>', '<ExcThread(monitor, started 125549880014592)>']
[2026-03-06 12:01:33] 2026-03-06 01:01:32,048 | INFO     | all workflow threads have been joined
[2026-03-06 12:01:33] 2026-03-06 01:01:32,048 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 12:01:33] 2026-03-06 01:01:32,048 | INFO     | traces error code: 0
[2026-03-06 12:01:33] 2026-03-06 01:01:32,049 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 12:01:33] 2026-03-06 01:01:32,941 | INFO     | PID=48646 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-06 12:01:33] 2026-03-06 01:01:32,942 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 12:01:33] 2026-03-06 01:01:32,942 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 12:01:33] 2026-03-06 01:01:32,942 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 12:01:33] 2026-03-06 01:01:32,942 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 12:01:33] 2026-03-06 01:01:32,942 | INFO     | [monitor] control thread has ended
[2026-03-06 12:01:33] 2026-03-06 01:01:33,054 [wrapper] ==== pilot stdout END ====
[2026-03-06 12:01:33] 2026-03-06 01:01:33,063 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 12:01:33] 2026-03-06 01:01:33,070 [wrapper] pilotpid: 48646
[2026-03-06 12:01:33] 2026-03-06 01:01:33,077 [wrapper] Pilot exit status: 0
[2026-03-06 12:01:33] 2026-03-06 01:01:33,130 [wrapper] pandaids: 7038693894
[2026-03-06 12:01:33] 2026-03-06 01:01:33,228 [wrapper] cleanup supervisor_pilot   57765 48647
[2026-03-06 12:01:33] 2026-03-06 01:01:33,237 [wrapper] Test setup, not cleaning
[2026-03-06 12:01:33] 2026-03-06 01:01:33,247 [wrapper] apfmon messages muted
[2026-03-06 12:01:33] 2026-03-06 01:01:33,254 [wrapper] ==== wrapper stdout END ====
[2026-03-06 12:01:33] 2026-03-06 01:01:33,262 [wrapper] ==== wrapper stderr END ====
[2026-03-06 12:01:33]  *** Error codes and diagnostics ***
[2026-03-06 12:01:33]     "exeErrorCode": 0,
[2026-03-06 12:01:33]     "exeErrorDiag": "",
[2026-03-06 12:01:33]     "pilotErrorCode": 0,
[2026-03-06 12:01:33]     "pilotErrorDiag": "",
[2026-03-06 12:01:33]  *** Listing of results directory ***
[2026-03-06 12:01:33] total 612224
[2026-03-06 12:01:33] -rw-r--r-- 1 boinc boinc      5111 Mar  6 04:40 queuedata.json
[2026-03-06 12:01:33] -rw-r--r-- 1 boinc boinc    584627 Mar  6 04:40 pilot3.tar.gz
[2026-03-06 12:01:33] -rwx------ 1 boinc boinc     36322 Mar  6 04:40 runpilot2-wrapper.sh
[2026-03-06 12:01:33] -rw-r--r-- 1 boinc boinc       100 Mar  6 11:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 12:01:33] -rwxr-xr-x 1 boinc boinc      7986 Mar  6 11:01 run_atlas
[2026-03-06 12:01:33] -rw-r--r-- 1 boinc boinc       105 Mar  6 11:01 job.xml
[2026-03-06 12:01:33] -rw-r--r-- 2 boinc boinc 442159367 Mar  6 11:01 EVNT.46701403._000193.pool.root.1
[2026-03-06 12:01:33] -rw-r--r-- 2 boinc boinc    597955 Mar  6 11:01 input.tar.gz
[2026-03-06 12:01:33] drwxrwx--x 2 boinc boinc      4096 Mar  6 11:01 shared
[2026-03-06 12:01:33] -rw-r--r-- 2 boinc boinc     15845 Mar  6 11:01 start_atlas.sh
[2026-03-06 12:01:33] -rw-r--r-- 1 boinc boinc         0 Mar  6 11:01 boinc_setup_complete
[2026-03-06 12:01:33] -rw-r--r-- 1 boinc boinc      6328 Mar  6 11:01 init_data.xml
[2026-03-06 12:01:33] -rw-r--r-- 1 boinc boinc         0 Mar  6 11:01 boinc_lockfile
[2026-03-06 12:01:33] -rw-r--r-- 1 boinc boinc      2561 Mar  6 11:01 pandaJob.out
[2026-03-06 12:01:33] -rw------- 1 boinc boinc        51 Mar  6 11:01 setup.sh.local
[2026-03-06 12:01:33] -rw------- 1 boinc boinc    998552 Mar  6 11:02 agis_schedconf.cvmfs.json
[2026-03-06 12:01:33] -rw------- 1 boinc boinc   1521291 Mar  6 11:02 agis_ddmendpoints.agis.ALL.json
[2026-03-06 12:01:33] -rw------- 1 boinc boinc       422 Mar  6 11:03 workernode_map.json
[2026-03-06 12:01:33] drwx------ 5 boinc boinc      4096 Mar  6 11:03 pilot3
[2026-03-06 12:01:33] -rw-r--r-- 1 boinc boinc       530 Mar  6 12:00 boinc_task_state.xml
[2026-03-06 12:01:33] -rw------- 1 boinc boinc 179804794 Mar  6 12:00 HITS.48955006._009613.pool.root.1
[2026-03-06 12:01:33] -rw------- 1 boinc boinc      1010 Mar  6 12:00 memory_monitor_summary.json
[2026-03-06 12:01:33] -rw------- 1 boinc boinc    280785 Mar  6 12:00 log.48955006._009613.job.log.tgz.1
[2026-03-06 12:01:33] -rw------- 1 boinc boinc      6275 Mar  6 12:01 heartbeat.json
[2026-03-06 12:01:33] -rw-r--r-- 1 boinc boinc      8192 Mar  6 12:01 boinc_mmap_file
[2026-03-06 12:01:33] -rw-r--r-- 1 boinc boinc        27 Mar  6 12:01 wrapper_checkpoint.txt
[2026-03-06 12:01:33] -rw------- 1 boinc boinc       745 Mar  6 12:01 pilotlog.txt
[2026-03-06 12:01:33] -rw------- 1 boinc boinc        96 Mar  6 12:01 pilot_heartbeat.json
[2026-03-06 12:01:33] -rw------- 1 boinc boinc    227624 Mar  6 12:01 log.48955006._009613.job.log.1
[2026-03-06 12:01:33] -rw------- 1 boinc boinc       357 Mar  6 12:01 output.list
[2026-03-06 12:01:33] -rw-r--r-- 1 boinc boinc       620 Mar  6 12:01 runtime_log
[2026-03-06 12:01:33] -rw------- 1 boinc boinc    522240 Mar  6 12:01 result.tar.gz
[2026-03-06 12:01:33] -rw-r--r-- 1 boinc boinc      9291 Mar  6 12:01 runtime_log.err
[2026-03-06 12:01:33] -rw------- 1 boinc boinc       648 Mar  6 12:01 JhmLDmkrRI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmFWOLDmIWIoDo.diag
[2026-03-06 12:01:33] -rw-r--r-- 1 boinc boinc     21315 Mar  6 12:01 stderr.txt
[2026-03-06 12:01:33] HITS file was successfully produced:
[2026-03-06 12:01:33] -rw------- 1 boinc boinc 179804794 Mar  6 12:00 shared/HITS.pool.root.1
[2026-03-06 12:01:33]  *** Contents of shared directory: ***
[2026-03-06 12:01:33] total 608512
[2026-03-06 12:01:33] -rw-r--r-- 2 boinc boinc 442159367 Mar  6 11:01 ATLAS.root_0
[2026-03-06 12:01:33] -rw-r--r-- 2 boinc boinc    597955 Mar  6 11:01 input.tar.gz
[2026-03-06 12:01:33] -rw-r--r-- 2 boinc boinc     15845 Mar  6 11:01 start_atlas.sh
[2026-03-06 12:01:33] -rw------- 1 boinc boinc 179804794 Mar  6 12:00 HITS.pool.root.1
[2026-03-06 12:01:33] -rw------- 1 boinc boinc    522240 Mar  6 12:01 result.tar.gz
12:01:34 (44567): run_atlas exited; CPU time 19663.256852
12:01:34 (44567): called boinc_finish(0)

</stderr_txt>
]]>

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