Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:01:49 (1616204): wrapper (7.7.26015): starting
18:01:49 (1616204): wrapper: running run_atlas (--nthreads 9)
[2026-03-05 18:01:49] Arguments: --nthreads 9
[2026-03-05 18:01:49] Threads: 9
[2026-03-05 18:01:49] Checking for CVMFS
[2026-03-05 18:01:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 18:01:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 18:01:50] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 18:01:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 18:01:51] 2.13.3.0 7236 102712 273460 156935 3 932 39798548 40960000 29399 16776704 0 379008187 99.646 338194725 35404 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-05 18:01:51] CVMFS is ok
[2026-03-05 18:01:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 18:01:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 18:01:51] Further information can be found at the LHC@home message board.
[2026-03-05 18:01:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 18:01:51] Checking for apptainer binary...
[2026-03-05 18:01:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 18:01:51] Running /usr/bin/apptainer --version
[2026-03-05 18:01:52] apptainer version 1.4.5-2.el9
[2026-03-05 18:01:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 18:01:52] c-212-11.aglt2.org
[2026-03-05 18:01:52] apptainer works
[2026-03-05 18:01:52] Set ATHENA_PROC_NUMBER=9
[2026-03-05 18:01:52] Set ATHENA_CORE_NUMBER=9
[2026-03-05 18:01:52] Starting ATLAS job with PandaID=7036192692
[2026-03-05 18:01:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 22:14:23]  *** The last 200 lines of the pilot log: ***
[2026-03-05 22:14:24] 2026-03-06 03:13:36,902 | INFO     | job 7036192692 has finished - writing final server update
[2026-03-05 22:14:24] 2026-03-06 03:13:36,902 | INFO     | total number of processed events: 400 (read)
[2026-03-05 22:14:24] 2026-03-06 03:13:36,923 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7036192692/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 22:14:24] 2026-03-06 03:13:36,925 | INFO     | extracted standard info from prmon json
[2026-03-05 22:14:24] 2026-03-06 03:13:36,925 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 22:14:24] 2026-03-06 03:13:36,925 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 22:14:24] 2026-03-06 03:13:36,926 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 22:14:24] 2026-03-06 03:13:36,926 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 22:14:24] 2026-03-06 03:13:36,929 | INFO     | fitting pss+swap vs Time
[2026-03-05 22:14:24] 2026-03-06 03:13:36,929 | INFO     | sum of square deviations: 4503952896.672141
[2026-03-05 22:14:24] 2026-03-06 03:13:36,930 | INFO     | sum of deviations: 73263172918.47543
[2026-03-05 22:14:24] 2026-03-06 03:13:36,931 | INFO     | mean x: 1772759345.9262295
[2026-03-05 22:14:24] 2026-03-06 03:13:36,931 | INFO     | mean y: 2530987.581967213
[2026-03-05 22:14:24] 2026-03-06 03:13:36,931 | INFO     | intersect: -28833910574.540134
[2026-03-05 22:14:24] 2026-03-06 03:13:36,931 | INFO     | chi2: 3.659855456633198
[2026-03-05 22:14:24] 2026-03-06 03:13:36,931 | INFO     | sum of square deviations: 4232705110.7447786
[2026-03-05 22:14:24] 2026-03-06 03:13:36,933 | INFO     | sum of deviations: 71796852755.72395
[2026-03-05 22:14:24] 2026-03-06 03:13:36,933 | INFO     | mean x: 1772759193.4351463
[2026-03-05 22:14:24] 2026-03-06 03:13:36,933 | INFO     | mean y: 2530163.1757322177
[2026-03-05 22:14:24] 2026-03-06 03:13:36,933 | INFO     | intersect: -30067726907.018196
[2026-03-05 22:14:24] 2026-03-06 03:13:36,933 | INFO     | chi2: 3.663280686452822
[2026-03-05 22:14:24] 2026-03-06 03:13:36,933 | INFO     | current chi2=3.663280686452822 (change=-0.09358921029015706 %)
[2026-03-05 22:14:24] 2026-03-06 03:13:36,933 | INFO     | right removable region: 238
[2026-03-05 22:14:24] 2026-03-06 03:13:36,933 | INFO     | sum of square deviations: 4232641670.7447786
[2026-03-05 22:14:24] 2026-03-06 03:13:36,935 | INFO     | sum of deviations: -1996988462.4184132
[2026-03-05 22:14:24] 2026-03-06 03:13:36,935 | INFO     | mean x: 1772759498.4351463
[2026-03-05 22:14:24] 2026-03-06 03:13:36,935 | INFO     | mean y: 2573199.8117154813
[2026-03-05 22:14:24] 2026-03-06 03:13:36,935 | INFO     | intersect: 838972909.5926541
[2026-03-05 22:14:24] 2026-03-06 03:13:36,935 | INFO     | chi2: 0.14322854016247963
[2026-03-05 22:14:24] 2026-03-06 03:13:36,935 | INFO     | current chi2=0.14322854016247963 (change=96.08649735325233 %)
[2026-03-05 22:14:24] 2026-03-06 03:13:36,935 | INFO     | sum of square deviations: 3972446932.277775
[2026-03-05 22:14:24] 2026-03-06 03:13:36,937 | INFO     | sum of deviations: -15767352223.055563
[2026-03-05 22:14:24] 2026-03-06 03:13:36,937 | INFO     | mean x: 1772759650.9444444
[2026-03-05 22:14:24] 2026-03-06 03:13:36,937 | INFO     | mean y: 2581275.688034188
[2026-03-05 22:14:24] 2026-03-06 03:13:36,937 | INFO     | intersect: 7038981333.330782
[2026-03-05 22:14:24] 2026-03-06 03:13:36,937 | INFO     | chi2: 0.016259843284432314
[2026-03-05 22:14:24] 2026-03-06 03:13:36,937 | INFO     | current chi2=0.016259843284432314 (change=88.64762339545806 %)
[2026-03-05 22:14:24] 2026-03-06 03:13:36,937 | INFO     | sum of square deviations: 3723136118.76855
[2026-03-05 22:14:24] 2026-03-06 03:13:36,939 | INFO     | sum of deviations: -16931465542.09606
[2026-03-05 22:14:24] 2026-03-06 03:13:36,939 | INFO     | mean x: 1772759803.4541485
[2026-03-05 22:14:24] 2026-03-06 03:13:36,939 | INFO     | mean y: 2581980.943231441
[2026-03-05 22:14:24] 2026-03-06 03:13:36,939 | INFO     | intersect: 8064447185.196006
[2026-03-05 22:14:24] 2026-03-06 03:13:36,939 | INFO     | chi2: 0.01263928599640253
[2026-03-05 22:14:24] 2026-03-06 03:13:36,939 | INFO     | current chi2=0.01263928599640253 (change=22.26686459823521 %)
[2026-03-05 22:14:24] 2026-03-06 03:13:36,939 | INFO     | left removable region: 30
[2026-03-05 22:14:24] 2026-03-06 03:13:36,939 | INFO     | sum of square deviations: 2789833476.4182825
[2026-03-05 22:14:24] 2026-03-06 03:13:36,940 | INFO     | sum of deviations: -13510710959.61538
[2026-03-05 22:14:24] 2026-03-06 03:13:36,940 | INFO     | mean x: 1772760077.9471154
[2026-03-05 22:14:24] 2026-03-06 03:13:36,941 | INFO     | mean y: 2580181.3076923075
[2026-03-05 22:14:24] 2026-03-06 03:13:36,941 | INFO     | intersect: 8587769661.73447
[2026-03-05 22:14:24] 2026-03-06 03:13:36,941 | INFO     | chi2: 0.01185788301634127
[2026-03-05 22:14:24] 2026-03-06 03:13:36,941 | INFO     | current memory leak: -4.84 B/s (using 208 data points, chi2=0.01)
[2026-03-05 22:14:24] 2026-03-06 03:13:36,941 | INFO     | could have reported an average CPU frequency of 3098 MHz (12 samples)
[2026-03-05 22:14:24] 2026-03-06 03:13:36,942 | INFO     | ..............................
[2026-03-05 22:14:24] 2026-03-06 03:13:36,942 | INFO     | . Timing measurements:
[2026-03-05 22:14:24] 2026-03-06 03:13:36,942 | INFO     | . get job = 0 s
[2026-03-05 22:14:24] 2026-03-06 03:13:36,942 | INFO     | . initial setup = 41 s
[2026-03-05 22:14:24] 2026-03-06 03:13:36,942 | INFO     | . payload setup = 54 s
[2026-03-05 22:14:24] 2026-03-06 03:13:36,942 | INFO     | . stage-in = 0 s
[2026-03-05 22:14:24] 2026-03-06 03:13:36,942 | INFO     | . payload execution = 14908 s
[2026-03-05 22:14:24] 2026-03-06 03:13:36,942 | INFO     | . stage-out = 2 s
[2026-03-05 22:14:24] 2026-03-06 03:13:36,942 | INFO     | . log creation = 0 s
[2026-03-05 22:14:24] 2026-03-06 03:13:36,942 | INFO     | ..............................
[2026-03-05 22:14:24] 2026-03-06 03:13:37,005 | INFO     | 
[2026-03-05 22:14:24] 2026-03-06 03:13:37,006 | INFO     | job summary report
[2026-03-05 22:14:24] 2026-03-06 03:13:37,006 | INFO     | --------------------------------------------------
[2026-03-05 22:14:24] 2026-03-06 03:13:37,006 | INFO     | PanDA job id: 7036192692
[2026-03-05 22:14:24] 2026-03-06 03:13:37,006 | INFO     | task id: 48851999
[2026-03-05 22:14:24] 2026-03-06 03:13:37,006 | INFO     | errors: (none)
[2026-03-05 22:14:24] 2026-03-06 03:13:37,006 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 22:14:24] 2026-03-06 03:13:37,006 | INFO     | pilot state: finished 
[2026-03-05 22:14:24] 2026-03-06 03:13:37,006 | INFO     | transexitcode: 0
[2026-03-05 22:14:24] 2026-03-06 03:13:37,006 | INFO     | exeerrorcode: 0
[2026-03-05 22:14:24] 2026-03-06 03:13:37,006 | INFO     | exeerrordiag: 
[2026-03-05 22:14:24] 2026-03-06 03:13:37,006 | INFO     | exitcode: 0
[2026-03-05 22:14:24] 2026-03-06 03:13:37,006 | INFO     | exitmsg: OK
[2026-03-05 22:14:24] 2026-03-06 03:13:37,006 | INFO     | cpuconsumptiontime: 53233 s
[2026-03-05 22:14:24] 2026-03-06 03:13:37,006 | INFO     | nevents: 400
[2026-03-05 22:14:24] 2026-03-06 03:13:37,006 | INFO     | neventsw: 0
[2026-03-05 22:14:24] 2026-03-06 03:13:37,007 | INFO     | pid: 1631708
[2026-03-05 22:14:24] 2026-03-06 03:13:37,007 | INFO     | pgrp: 1631708
[2026-03-05 22:14:24] 2026-03-06 03:13:37,007 | INFO     | corecount: 9
[2026-03-05 22:14:24] 2026-03-06 03:13:37,007 | INFO     | event service: False
[2026-03-05 22:14:24] 2026-03-06 03:13:37,007 | INFO     | sizes: {0: 2294794, 1: 2295479, 2: 2295940, 13: 2295940, 14967: 2326828, 14970: 2336010, 14972: 2336148}
[2026-03-05 22:14:24] 2026-03-06 03:13:37,007 | INFO     | --------------------------------------------------
[2026-03-05 22:14:24] 2026-03-06 03:13:37,007 | INFO     | 
[2026-03-05 22:14:24] 2026-03-06 03:13:37,007 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-05 22:14:24] 2026-03-06 03:13:37,051 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 22:14:24] 2026-03-06 03:13:37,051 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 22:14:24] 2026-03-06 03:13:37,051 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 22:14:24] 2026-03-06 03:13:37,051 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 22:14:24] 2026-03-06 03:13:37,051 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 22:14:24] 2026-03-06 03:13:37,052 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 22:14:24] 2026-03-06 03:13:37,052 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 22:14:24] 2026-03-06 03:13:37,052 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 22:14:24] 2026-03-06 03:13:37,052 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 22:14:24] 2026-03-06 03:13:37,052 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 22:14:24] 2026-03-06 03:13:37,052 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 22:14:24] 2026-03-06 03:13:37,052 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 22:14:24] 2026-03-06 03:13:37,052 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 22:14:24] 2026-03-06 03:13:37,052 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 22:14:24] 2026-03-06 03:13:37,052 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 22:14:24] 2026-03-06 03:13:37,053 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 22:14:24] 2026-03-06 03:13:37,053 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 22:14:24] 2026-03-06 03:13:37,053 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 22:14:24] 2026-03-06 03:13:37,053 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 22:14:24] 2026-03-06 03:13:37,053 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 22:14:24] 2026-03-06 03:13:37,053 | INFO     | job 7036192692 has completed (purged errors)
[2026-03-05 22:14:24] 2026-03-06 03:13:37,053 | INFO     | overall cleanup function is called
[2026-03-05 22:14:24] 2026-03-06 03:13:38,062 | INFO     | --- collectZombieJob: --- 10, [1631708]
[2026-03-05 22:14:24] 2026-03-06 03:13:38,062 | INFO     | zombie collector waiting for pid 1631708
[2026-03-05 22:14:24] 2026-03-06 03:13:38,063 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 22:14:24] 2026-03-06 03:13:38,063 | INFO     | collected zombie processes
[2026-03-05 22:14:24] 2026-03-06 03:13:38,063 | INFO     | will attempt to kill all subprocesses of pid=1631708
[2026-03-05 22:14:24] 2026-03-06 03:13:39,435 | INFO     | PID=1621685 has CPU usage=13.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-05 22:14:24] 2026-03-06 03:13:39,435 | INFO     | .. there are 36 such processes running
[2026-03-05 22:14:24] 2026-03-06 03:13:39,474 | INFO     | process IDs to be killed: [1631708] (in reverse order)
[2026-03-05 22:14:24] 2026-03-06 03:13:40,019 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 22:14:24] 2026-03-06 03:13:40,022 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 22:14:24] 2026-03-06 03:13:40,052 | INFO     | did not find any defunct processes belonging to 1631708
[2026-03-05 22:14:24] 2026-03-06 03:13:40,117 | INFO     | did not find any defunct processes belonging to 1631708
[2026-03-05 22:14:24] 2026-03-06 03:13:40,118 | INFO     | ready for new job
[2026-03-05 22:14:24] 2026-03-06 03:13:40,118 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 22:14:24] 2026-03-06 03:13:40,120 | INFO     | **************************************
[2026-03-05 22:14:24] 2026-03-06 03:13:40,120 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 22:14:24] 2026-03-06 03:13:40,120 | INFO     | **************************************
[2026-03-05 22:14:24] 2026-03-06 03:13:40,120 | INFO     | 
[2026-03-05 22:14:24] 2026-03-06 03:13:40,131 | INFO     | architecture information:
[2026-03-05 22:14:24] 2026-03-06 03:13:40,139 | INFO     | executing command: cat /etc/os-release
[2026-03-05 22:14:24] 2026-03-06 03:13:40,214 | INFO     | cat /etc/os-release:
[2026-03-05 22:14:24] NAME="CentOS Linux"
[2026-03-05 22:14:24] VERSION="7 (Core)"
[2026-03-05 22:14:24] ID="centos"
[2026-03-05 22:14:24] ID_LIKE="rhel fedora"
[2026-03-05 22:14:24] VERSION_ID="7"
[2026-03-05 22:14:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 22:14:24] ANSI_COLOR="0;31"
[2026-03-05 22:14:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 22:14:24] HOME_URL="https://www.centos.org/"
[2026-03-05 22:14:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 22:14:24] 
[2026-03-05 22:14:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 22:14:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 22:14:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 22:14:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 22:14:24] 
[2026-03-05 22:14:24] 2026-03-06 03:13:40,214 | INFO     | **************************************
[2026-03-05 22:14:24] 2026-03-06 03:13:40,717 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-05 22:14:24] 2026-03-06 03:13:40,751 | INFO     | sufficient remaining disk space (125747331072 B)
[2026-03-05 22:14:24] 2026-03-06 03:13:40,752 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 22:14:24] 2026-03-06 03:13:40,752 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 22:14:24] 2026-03-06 03:13:40,752 | INFO     | update_server=False
[2026-03-05 22:14:24] 2026-03-06 03:13:40,752 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 22:14:24] 2026-03-06 03:13:40,752 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 22:14:24] 2026-03-06 03:13:40,752 | INFO     | aborting loop
[2026-03-05 22:14:24] 2026-03-06 03:13:40,753 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 22:14:24] 2026-03-06 03:13:40,753 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 22:14:24] 2026-03-06 03:13:41,391 | INFO     | all payload control threads have been joined
[2026-03-05 22:14:24] 2026-03-06 03:13:41,720 | INFO     | all data control threads have been joined
[2026-03-05 22:14:24] 2026-03-06 03:13:41,757 | INFO     | [job] retrieve thread has finished
[2026-03-05 22:14:24] 2026-03-06 03:13:41,765 | INFO     | [job] job monitor thread has finished
[2026-03-05 22:14:24] 2026-03-06 03:13:42,045 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 22:14:24] 2026-03-06 03:13:42,161 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 22:14:24] 2026-03-06 03:13:42,313 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 22:14:24] 2026-03-06 03:13:42,397 | INFO     | [payload] control thread has finished
[2026-03-05 22:14:24] 2026-03-06 03:13:42,422 | INFO     | [payload] failed_post thread has finished
[2026-03-05 22:14:24] 2026-03-06 03:13:42,485 | INFO     | all job control threads have been joined
[2026-03-05 22:14:24] 2026-03-06 03:13:42,687 | INFO     | [job] validate thread has finished
[2026-03-05 22:14:24] 2026-03-06 03:13:42,726 | INFO     | [data] control thread has finished
[2026-03-05 22:14:24] 2026-03-06 03:13:42,758 | INFO     | [data] copytool_out thread has finished
[2026-03-05 22:14:24] 2026-03-06 03:13:42,919 | INFO     | [payload] validate_post thread has finished
[2026-03-05 22:14:24] 2026-03-06 03:13:43,051 | INFO     | [job] queue monitor thread has finished
[2026-03-05 22:14:24] 2026-03-06 03:13:43,171 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 22:14:24] 2026-03-06 03:13:43,176 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 22:14:24] 2026-03-06 03:13:43,192 | INFO     | [data] copytool_in thread has finished
[2026-03-05 22:14:24] 2026-03-06 03:13:43,491 | INFO     | [job] control thread has finished
[2026-03-05 22:14:24] 2026-03-06 03:13:44,759 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 22:14:24] 2026-03-06 03:14:12,220 | INFO     | PID=1621685 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 22:14:24] 2026-03-06 03:14:12,220 | INFO     | .. there are 36 such processes running
[2026-03-05 22:14:24] 2026-03-06 03:14:12,221 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 22:14:24] 2026-03-06 03:14:12,221 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 22:14:24] 2026-03-06 03:14:12,221 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 22:14:24] 2026-03-06 03:14:17,127 | INFO     | [monitor] cgroup control has ended
[2026-03-05 22:14:24] 2026-03-06 03:14:18,056 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139730218968896)>', '<ExcThread(monitor, started 139729756473088)>']
[2026-03-05 22:14:24] 2026-03-06 03:14:18,274 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 22:14:24] 2026-03-06 03:14:18,275 | INFO     | [monitor] control thread has ended
[2026-03-05 22:14:24] 2026-03-06 03:14:23,084 | INFO     | all workflow threads have been joined
[2026-03-05 22:14:24] 2026-03-06 03:14:23,086 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 22:14:24] 2026-03-06 03:14:23,087 | INFO     | traces error code: 0
[2026-03-05 22:14:24] 2026-03-06 03:14:23,087 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 22:14:24] 2026-03-06 03:14:23,419 [wrapper] ==== pilot stdout END ====
[2026-03-05 22:14:24] 2026-03-06 03:14:23,454 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 22:14:24] 2026-03-06 03:14:23,478 [wrapper] pilotpid: 1621685
[2026-03-05 22:14:24] 2026-03-06 03:14:23,516 [wrapper] Pilot exit status: 0
[2026-03-05 22:14:24] 2026-03-06 03:14:23,616 [wrapper] pandaids: 7036192692
[2026-03-05 22:14:24] 2026-03-06 03:14:23,898 [wrapper] cleanup supervisor_pilot 2783694 1621686
[2026-03-05 22:14:24] 2026-03-06 03:14:23,903 [wrapper] Test setup, not cleaning
[2026-03-05 22:14:24] 2026-03-06 03:14:23,905 [wrapper] apfmon messages muted
[2026-03-05 22:14:24] 2026-03-06 03:14:23,908 [wrapper] ==== wrapper stdout END ====
[2026-03-05 22:14:24] 2026-03-06 03:14:23,910 [wrapper] ==== wrapper stderr END ====
[2026-03-05 22:14:24]  *** Error codes and diagnostics ***
[2026-03-05 22:14:24]     "exeErrorCode": 0,
[2026-03-05 22:14:24]     "exeErrorDiag": "",
[2026-03-05 22:14:24]     "pilotErrorCode": 0,
[2026-03-05 22:14:24]     "pilotErrorDiag": "",
[2026-03-05 22:14:24]  *** Listing of results directory ***
[2026-03-05 22:14:24] total 427764
[2026-03-05 22:14:24] -rw-r--r--. 1 boincer umatlas    584627 Mar  2 23:44 pilot3.tar.gz
[2026-03-05 22:14:24] -rw-r--r--. 1 boincer umatlas      5111 Mar  3 00:00 queuedata.json
[2026-03-05 22:14:24] -rwx------. 1 boincer umatlas     36322 Mar  3 00:02 runpilot2-wrapper.sh
[2026-03-05 22:14:24] -rw-r--r--. 1 boincer umatlas       100 Mar  5 18:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 22:14:24] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  5 18:01 run_atlas
[2026-03-05 22:14:24] -rw-r--r--. 1 boincer umatlas       105 Mar  5 18:01 job.xml
[2026-03-05 22:14:24] -rw-r--r--. 2 boincer umatlas 236361726 Mar  5 18:01 EVNT.48461482._000003.pool.root.1
[2026-03-05 22:14:24] -rw-r--r--. 2 boincer umatlas     15845 Mar  5 18:01 start_atlas.sh
[2026-03-05 22:14:24] drwxrwx--x. 2 boincer umatlas      4096 Mar  5 18:01 shared
[2026-03-05 22:14:24] -rw-r--r--. 2 boincer umatlas    597953 Mar  5 18:01 input.tar.gz
[2026-03-05 22:14:24] -rw-r--r--. 1 boincer umatlas         0 Mar  5 18:01 boinc_lockfile
[2026-03-05 22:14:24] -rw-r--r--. 1 boincer umatlas      2616 Mar  5 18:01 pandaJob.out
[2026-03-05 22:14:24] -rw-------. 1 boincer umatlas        57 Mar  5 18:01 setup.sh.local
[2026-03-05 22:14:24] -rw-------. 1 boincer umatlas    998560 Mar  5 18:03 agis_schedconf.cvmfs.json
[2026-03-05 22:14:24] -rw-------. 1 boincer umatlas       430 Mar  5 18:03 workernode_map.json
[2026-03-05 22:14:24] drwx------. 5 boincer umatlas      4096 Mar  5 18:03 pilot3
[2026-03-05 22:14:24] -rw-------. 1 boincer umatlas 192981403 Mar  5 22:12 HITS.48851999._000067.pool.root.1
[2026-03-05 22:14:24] -rw-r--r--. 1 boincer umatlas       530 Mar  5 22:12 boinc_task_state.xml
[2026-03-05 22:14:24] -rw-------. 1 boincer umatlas      1036 Mar  5 22:13 memory_monitor_summary.json
[2026-03-05 22:14:24] -rw-------. 1 boincer umatlas   1521291 Mar  5 22:13 agis_ddmendpoints.agis.ALL.json
[2026-03-05 22:14:24] -rw-------. 1 boincer umatlas    481362 Mar  5 22:13 log.48851999._000067.job.log.tgz.1
[2026-03-05 22:14:24] -rw-------. 1 boincer umatlas      6319 Mar  5 22:13 heartbeat.json
[2026-03-05 22:14:24] -rw-------. 1 boincer umatlas        95 Mar  5 22:13 pilot_heartbeat.json
[2026-03-05 22:14:24] -rw-r--r--. 1 boincer umatlas      6959 Mar  5 22:13 init_data.xml
[2026-03-05 22:14:24] -rw-r--r--. 1 boincer umatlas      8192 Mar  5 22:14 boinc_mmap_file
[2026-03-05 22:14:24] -rw-r--r--. 1 boincer umatlas        28 Mar  5 22:14 wrapper_checkpoint.txt
[2026-03-05 22:14:24] -rw-------. 1 boincer umatlas      4821 Mar  5 22:14 pilotlog.txt
[2026-03-05 22:14:24] -rw-------. 1 boincer umatlas   1895478 Mar  5 22:14 log.48851999._000067.job.log.1
[2026-03-05 22:14:24] -rw-------. 1 boincer umatlas       357 Mar  5 22:14 output.list
[2026-03-05 22:14:24] -rw-r--r--. 1 boincer umatlas       620 Mar  5 22:14 runtime_log
[2026-03-05 22:14:24] -rw-------. 1 boincer umatlas   2396160 Mar  5 22:14 result.tar.gz
[2026-03-05 22:14:24] -rw-------. 1 boincer umatlas       657 Mar  5 22:14 VxJODmb4WH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmtlDLDmls2OHo.diag
[2026-03-05 22:14:24] -rw-r--r--. 1 boincer umatlas      9342 Mar  5 22:14 runtime_log.err
[2026-03-05 22:14:24] -rw-r--r--. 1 boincer umatlas     12329 Mar  5 22:14 stderr.txt
[2026-03-05 22:14:24] HITS file was successfully produced:
[2026-03-05 22:14:24] -rw-------. 1 boincer umatlas 192981403 Mar  5 22:12 shared/HITS.pool.root.1
[2026-03-05 22:14:24]  *** Contents of shared directory: ***
[2026-03-05 22:14:24] total 422232
[2026-03-05 22:14:24] -rw-r--r--. 2 boincer umatlas 236361726 Mar  5 18:01 ATLAS.root_0
[2026-03-05 22:14:24] -rw-r--r--. 2 boincer umatlas     15845 Mar  5 18:01 start_atlas.sh
[2026-03-05 22:14:24] -rw-r--r--. 2 boincer umatlas    597953 Mar  5 18:01 input.tar.gz
[2026-03-05 22:14:24] -rw-------. 1 boincer umatlas 192981403 Mar  5 22:12 HITS.pool.root.1
[2026-03-05 22:14:24] -rw-------. 1 boincer umatlas   2396160 Mar  5 22:14 result.tar.gz
22:14:25 (1616204): run_atlas exited; CPU time 53906.094928
22:14:25 (1616204): called boinc_finish(0)

</stderr_txt>
]]>

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