Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:47:23 (1817535): wrapper (7.7.26015): starting
13:47:23 (1817535): wrapper: running run_atlas (--nthreads 12)
[2026-03-05 13:47:23] Arguments: --nthreads 12
[2026-03-05 13:47:23] Threads: 12
[2026-03-05 13:47:23] Checking for CVMFS
[2026-03-05 13:47:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 13:47:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 13:47:24] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 13:47:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 13:47:24] 2.11.5.0 2097640 171210 361084 156933 2 364 45095572 45568001 15815 130560 0 1485250546 99.805 866452010 20744 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-03-05 13:47:24] CVMFS is ok
[2026-03-05 13:47:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 13:47:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 13:47:24] Further information can be found at the LHC@home message board.
[2026-03-05 13:47:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 13:47:24] Checking for apptainer binary...
[2026-03-05 13:47:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 13:47:24] Running /usr/bin/apptainer --version
[2026-03-05 13:47:25] apptainer version 1.4.1-1.el9
[2026-03-05 13:47:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 13:47:25] wns0049.triumf.lcg
[2026-03-05 13:47:25] apptainer works
[2026-03-05 13:47:25] Set ATHENA_PROC_NUMBER=12
[2026-03-05 13:47:25] Set ATHENA_CORE_NUMBER=12
[2026-03-05 13:47:26] Starting ATLAS job with PandaID=7038618839
[2026-03-05 13:47:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 13:52:28]  *** The last 200 lines of the pilot log: ***
[2026-03-05 13:52:28] 2026-03-05 21:51:44,739 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | WARNING  | wrong length of table data, x=[1772747356.0], y=[701.0] (must be same and length>=4)
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | could have reported an average CPU frequency of 2472 MHz (4 samples)
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | ..............................
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . Timing measurements:
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . get job = 0 s
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . initial setup = 23 s
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . payload setup = 26 s
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . stage-in = 0 s
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . payload execution = 49 s
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . stage-out = 0 s
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . log creation = 0 s
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | ..............................
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 13:52:28] 2026-03-05 21:51:44,780 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038618839/pilotlog.txt
[2026-03-05 13:52:28] 2026-03-05 21:51:44,847 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-05 13:52:28] - Log from pilotlog.txt -
[2026-03-05 13:52:28] 2026-03-05 21:51:44,738 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7038618839/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 13:52:28] 2026-03-05 21:51:44,738 | INFO     | extracted standard info from prmon json
[2026-03-05 13:52:28] 2026-03-05 21:51:44,738 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 13:52:28] 2026-03-05 21:51:44,738 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 13:52:28] 2026-03-05 21:51:44,739 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 13:52:28] 2026-03-05 21:51:44,739 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | WARNING  | wrong length of table data, x=[1772747356.0], y=[701.0] (must be same and length>=4)
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | could have reported an average CPU frequency of 2472 MHz (4 samples)
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | ..............................
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . Timing measurements:
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . get job = 0 s
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . initial setup = 23 s
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . payload setup = 26 s
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . stage-in = 0 s
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . payload execution = 49 s
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . stage-out = 0 s
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . log creation = 0 s
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | ..............................
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 13:52:28] 2026-03-05 21:51:44,780 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038618839/pilotlog.txt
[2026-03-05 13:52:28] 2026-03-05 21:51:44,848 | WARNING  | 
[2026-03-05 13:52:28] [begin log extracts]
[2026-03-05 13:52:28] - Log from pilotlog.txt -
[2026-03-05 13:52:28] 2026-03-05 21:51:44,738 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7038618839/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 13:52:28] 2026-03-05 21:51:44,738 | INFO     | extracted standard info from prmon json
[2026-03-05 13:52:28] 2026-03-05 21:51:44,738 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 13:52:28] 2026-03-05 21:51:44,738 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 13:52:28] 2026-03-05 21:51:44,739 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 13:52:28] 2026-03-05 21:51:44,739 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | WARNING  | wrong length of table data, x=[1772747356.0], y=[701.0] (must be same and length>=4)
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | could have reported an average CPU frequency of 2472 MHz (4 samples)
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | ..............................
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . Timing measurements:
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . get job = 0 s
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . initial setup = 23 s
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . payload setup = 26 s
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . stage-in = 0 s
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . payload execution = 49 s
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . stage-out = 0 s
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | . log creation = 0 s
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | ..............................
[2026-03-05 13:52:28] 2026-03-05 21:51:44,779 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 13:52:28] 2026-03-05 21:51:44,780 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038618839/pilotlog.txt
[2026-03-05 13:52:28] [end log extracts]
[2026-03-05 13:52:28] 2026-03-05 21:51:44,848 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-05 13:52:28] 2026-03-05 21:51:44,849 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-05 13:52:28] 2026-03-05 21:51:45,175 | INFO     | 
[2026-03-05 13:52:28] 2026-03-05 21:51:45,175 | INFO     | job summary report
[2026-03-05 13:52:28] 2026-03-05 21:51:45,175 | INFO     | --------------------------------------------------
[2026-03-05 13:52:28] 2026-03-05 21:51:45,176 | INFO     | PanDA job id: 7038618839
[2026-03-05 13:52:28] 2026-03-05 21:51:45,176 | INFO     | task id: 48955010
[2026-03-05 13:52:28] 2026-03-05 21:51:45,176 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-05 13:49:33,942 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-05 13:52:28] 2026-03-05 21:51:45,176 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 13:52:28] 2026-03-05 21:51:45,176 | INFO     | pilot state: failed 
[2026-03-05 13:52:28] 2026-03-05 21:51:45,176 | INFO     | transexitcode: 65
[2026-03-05 13:52:28] 2026-03-05 21:51:45,176 | INFO     | exeerrorcode: 65
[2026-03-05 13:52:28] 2026-03-05 21:51:45,176 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-05 13:52:28] 2026-03-05 21:51:45,176 | INFO     | exitcode: 65
[2026-03-05 13:52:28] 2026-03-05 21:51:45,176 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-05 13:52:28] 2026-03-05 21:51:45,176 | INFO     | cpuconsumptiontime: 15 s
[2026-03-05 13:52:28] 2026-03-05 21:51:45,176 | INFO     | nevents: 0
[2026-03-05 13:52:28] 2026-03-05 21:51:45,176 | INFO     | neventsw: 0
[2026-03-05 13:52:28] 2026-03-05 21:51:45,176 | INFO     | pid: 1825849
[2026-03-05 13:52:28] 2026-03-05 21:51:45,176 | INFO     | pgrp: 1825849
[2026-03-05 13:52:28] 2026-03-05 21:51:45,176 | INFO     | corecount: 12
[2026-03-05 13:52:28] 2026-03-05 21:51:45,176 | INFO     | event service: False
[2026-03-05 13:52:28] 2026-03-05 21:51:45,176 | INFO     | sizes: {0: 2295312, 1: 2295773, 2: 2295801, 80: 2319181, 82: 2323473, 85: 2323529, 202: 2323823}
[2026-03-05 13:52:28] 2026-03-05 21:51:45,176 | INFO     | --------------------------------------------------
[2026-03-05 13:52:28] 2026-03-05 21:51:45,176 | INFO     | 
[2026-03-05 13:52:28] 2026-03-05 21:51:45,177 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-05 13:52:28] 2026-03-05 21:51:45,249 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 13:52:28] 2026-03-05 21:51:45,250 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 13:52:28] 2026-03-05 21:51:45,250 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 13:52:28] 2026-03-05 21:51:45,250 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 13:52:28] 2026-03-05 21:51:45,250 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 13:52:28] 2026-03-05 21:51:45,250 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 13:52:28] 2026-03-05 21:51:45,250 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 13:52:28] 2026-03-05 21:51:45,250 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 13:52:28] 2026-03-05 21:51:45,250 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 13:52:28] 2026-03-05 21:51:45,250 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 13:52:28] 2026-03-05 21:51:45,250 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 13:52:28] 2026-03-05 21:51:45,251 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 13:52:28] 2026-03-05 21:51:45,251 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 13:52:28] 2026-03-05 21:51:45,251 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 13:52:28] 2026-03-05 21:51:45,251 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 13:52:28] 2026-03-05 21:51:45,251 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 13:52:28] 2026-03-05 21:51:45,251 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 13:52:28] 2026-03-05 21:51:45,251 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 13:52:28] 2026-03-05 21:51:45,251 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 13:52:28] 2026-03-05 21:51:45,251 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 13:52:28] 2026-03-05 21:51:45,252 | INFO     | job 7038618839 has completed (purged errors)
[2026-03-05 13:52:28] 2026-03-05 21:51:45,252 | INFO     | overall cleanup function is called
[2026-03-05 13:52:28] 2026-03-05 21:51:45,306 | INFO     | PID=1821266 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 13:52:28] 2026-03-05 21:51:45,307 | INFO     | .. there are 21 such processes running
[2026-03-05 13:52:28] 2026-03-05 21:51:46,259 | INFO     | --- collectZombieJob: --- 10, [1825849]
[2026-03-05 13:52:28] 2026-03-05 21:51:46,259 | INFO     | zombie collector waiting for pid 1825849
[2026-03-05 13:52:28] 2026-03-05 21:51:46,259 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 13:52:28] 2026-03-05 21:51:46,259 | INFO     | collected zombie processes
[2026-03-05 13:52:28] 2026-03-05 21:51:46,260 | INFO     | will attempt to kill all subprocesses of pid=1825849
[2026-03-05 13:52:28] 2026-03-05 21:51:46,875 | INFO     | process IDs to be killed: [1825849] (in reverse order)
[2026-03-05 13:52:28] 2026-03-05 21:51:46,992 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 13:52:28] 2026-03-05 21:51:46,992 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 13:52:28] 2026-03-05 21:51:47,014 | INFO     | did not find any defunct processes belonging to 1825849
[2026-03-05 13:52:28] 2026-03-05 21:51:47,021 | INFO     | did not find any defunct processes belonging to 1825849
[2026-03-05 13:52:28] 2026-03-05 21:51:47,022 | INFO     | ready for new job
[2026-03-05 13:52:28] 2026-03-05 21:51:47,022 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 13:52:28] 2026-03-05 21:51:47,023 | INFO     | **************************************
[2026-03-05 13:52:28] 2026-03-05 21:51:47,023 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 13:52:28] 2026-03-05 21:51:47,023 | INFO     | **************************************
[2026-03-05 13:52:28] 2026-03-05 21:51:47,023 | INFO     | 
[2026-03-05 13:52:28] 2026-03-05 21:51:47,025 | INFO     | architecture information:
[2026-03-05 13:52:28] 2026-03-05 21:51:47,026 | INFO     | executing command: cat /etc/os-release
[2026-03-05 13:52:28] 2026-03-05 21:51:47,091 | INFO     | cat /etc/os-release:
[2026-03-05 13:52:28] NAME="CentOS Linux"
[2026-03-05 13:52:28] VERSION="7 (Core)"
[2026-03-05 13:52:28] ID="centos"
[2026-03-05 13:52:28] ID_LIKE="rhel fedora"
[2026-03-05 13:52:28] VERSION_ID="7"
[2026-03-05 13:52:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 13:52:28] ANSI_COLOR="0;31"
[2026-03-05 13:52:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 13:52:28] HOME_URL="https://www.centos.org/"
[2026-03-05 13:52:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 13:52:28] 
[2026-03-05 13:52:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 13:52:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 13:52:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 13:52:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 13:52:28] 
[2026-03-05 13:52:28] 2026-03-05 21:51:47,091 | INFO     | **************************************
[2026-03-05 13:52:28] 2026-03-05 21:51:47,596 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-05 13:52:28] 2026-03-05 21:51:47,623 | INFO     | sufficient remaining disk space (1996569444352 B)
[2026-03-05 13:52:28] 2026-03-05 21:51:47,623 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 13:52:28] 2026-03-05 21:51:47,624 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 13:52:28] 2026-03-05 21:51:47,624 | INFO     | update_server=False
[2026-03-05 13:52:28] 2026-03-05 21:51:47,624 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 13:52:28] 2026-03-05 21:51:47,624 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 13:52:28] 2026-03-05 21:51:48,499 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 13:52:28] 2026-03-05 21:51:48,598 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 13:52:28] 2026-03-05 21:51:48,598 | INFO     | aborting loop
[2026-03-05 13:52:28] 2026-03-05 21:51:48,629 | INFO     | [job] retrieve thread has finished
[2026-03-05 13:52:28] 2026-03-05 21:51:48,688 | INFO     | all data control threads have been joined
[2026-03-05 13:52:28] 2026-03-05 21:51:48,786 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 13:52:28] 2026-03-05 21:51:48,829 | INFO     | [payload] validate_post thread has finished
[2026-03-05 13:52:28] 2026-03-05 21:51:48,917 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 13:52:28] 2026-03-05 21:51:48,923 | INFO     | all payload control threads have been joined
[2026-03-05 13:52:28] 2026-03-05 21:51:48,962 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 13:52:28] 2026-03-05 21:51:48,968 | INFO     | [job] validate thread has finished
[2026-03-05 13:52:28] 2026-03-05 21:51:49,048 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 13:52:28] 2026-03-05 21:51:49,195 | INFO     | all job control threads have been joined
[2026-03-05 13:52:28] 2026-03-05 21:51:49,375 | INFO     | [payload] failed_post thread has finished
[2026-03-05 13:52:28] 2026-03-05 21:51:49,459 | INFO     | [data] copytool_in thread has finished
[2026-03-05 13:52:28] 2026-03-05 21:51:49,608 | INFO     | [job] job monitor thread has finished
[2026-03-05 13:52:28] 2026-03-05 21:51:49,694 | INFO     | [data] control thread has finished
[2026-03-05 13:52:28] 2026-03-05 21:51:49,929 | INFO     | [payload] control thread has finished
[2026-03-05 13:52:28] 2026-03-05 21:51:50,195 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 13:52:28] 2026-03-05 21:51:50,201 | INFO     | [job] control thread has finished
[2026-03-05 13:52:28] 2026-03-05 21:51:50,505 | INFO     | [data] copytool_out thread has finished
[2026-03-05 13:52:28] 2026-03-05 21:51:51,201 | INFO     | [job] queue monitor thread has finished
[2026-03-05 13:52:28] 2026-03-05 21:51:51,633 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 13:52:28] 2026-03-05 21:52:17,749 | INFO     | PID=1821266 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 13:52:28] 2026-03-05 21:52:17,749 | INFO     | .. there are 21 such processes running
[2026-03-05 13:52:28] 2026-03-05 21:52:17,750 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 13:52:28] 2026-03-05 21:52:17,750 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 13:52:28] 2026-03-05 21:52:17,750 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 13:52:28] 2026-03-05 21:52:20,209 | INFO     | [monitor] cgroup control has ended
[2026-03-05 13:52:28] 2026-03-05 21:52:22,233 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139894552430400)>', '<ExcThread(monitor, started 139894156404480)>']
[2026-03-05 13:52:28] 2026-03-05 21:52:22,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 13:52:28] 2026-03-05 21:52:22,778 | INFO     | [monitor] control thread has ended
[2026-03-05 13:52:28] 2026-03-05 21:52:27,259 | INFO     | all workflow threads have been joined
[2026-03-05 13:52:28] 2026-03-05 21:52:27,259 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 13:52:28] 2026-03-05 21:52:27,260 | INFO     | traces error code: 0
[2026-03-05 13:52:28] 2026-03-05 21:52:27,260 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 13:52:28] 2026-03-05 21:52:27,561 [wrapper] ==== pilot stdout END ====
[2026-03-05 13:52:28] 2026-03-05 21:52:27,563 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 13:52:28] 2026-03-05 21:52:27,565 [wrapper] pilotpid: 1821266
[2026-03-05 13:52:28] 2026-03-05 21:52:27,567 [wrapper] Pilot exit status: 0
[2026-03-05 13:52:28] 2026-03-05 21:52:27,644 [wrapper] pandaids: 7038618839
[2026-03-05 13:52:28] 2026-03-05 21:52:27,881 [wrapper] cleanup supervisor_pilot 1821272 1821267
[2026-03-05 13:52:28] 2026-03-05 21:52:27,884 [wrapper] Test setup, not cleaning
[2026-03-05 13:52:28] 2026-03-05 21:52:27,886 [wrapper] apfmon messages muted
[2026-03-05 13:52:28] 2026-03-05 21:52:27,888 [wrapper] ==== wrapper stdout END ====
[2026-03-05 13:52:28] 2026-03-05 21:52:27,890 [wrapper] ==== wrapper stderr END ====
[2026-03-05 13:52:28]  *** Error codes and diagnostics ***
[2026-03-05 13:52:28]     "exeErrorCode": 65,
[2026-03-05 13:52:28]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-05 13:52:28]     "pilotErrorCode": 1305,
[2026-03-05 13:52:28]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-05 13:52:28]  *** Listing of results directory ***
[2026-03-05 13:52:28] total 429500
[2026-03-05 13:52:28] -rw-r--r--. 1 boinc boinc      5111 Mar  5 02:54 queuedata.json
[2026-03-05 13:52:28] -rw-r--r--. 1 boinc boinc    584627 Mar  5 02:54 pilot3.tar.gz
[2026-03-05 13:52:28] -rwx------. 1 boinc boinc     36322 Mar  5 02:55 runpilot2-wrapper.sh
[2026-03-05 13:52:28] -rw-r--r--. 1 boinc boinc       100 Mar  5 13:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 13:52:28] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 13:47 run_atlas
[2026-03-05 13:52:28] -rw-r--r--. 1 boinc boinc       105 Mar  5 13:47 job.xml
[2026-03-05 13:52:28] -rw-r--r--. 2 boinc boinc 435659356 Mar  5 13:47 EVNT.46701403._001098.pool.root.1
[2026-03-05 13:52:28] -rw-r--r--. 1 boinc boinc      6593 Mar  5 13:47 init_data.xml
[2026-03-05 13:52:28] drwxrwx--x. 2 boinc boinc      4096 Mar  5 13:47 shared
[2026-03-05 13:52:28] -rw-r--r--. 2 boinc boinc    597949 Mar  5 13:47 input.tar.gz
[2026-03-05 13:52:28] -rw-r--r--. 2 boinc boinc     15845 Mar  5 13:47 start_atlas.sh
[2026-03-05 13:52:28] -rw-r--r--. 1 boinc boinc         0 Mar  5 13:47 boinc_lockfile
[2026-03-05 13:52:28] -rw-r--r--. 1 boinc boinc      2560 Mar  5 13:47 pandaJob.out
[2026-03-05 13:52:28] -rw-------. 1 boinc boinc    998552 Mar  5 13:47 agis_schedconf.cvmfs.json
[2026-03-05 13:52:28] -rw-------. 1 boinc boinc   1521291 Mar  5 13:47 agis_ddmendpoints.agis.ALL.json
[2026-03-05 13:52:28] -rw-------. 1 boinc boinc       445 Mar  5 13:48 workernode_map.json
[2026-03-05 13:52:28] drwx------. 5 boinc boinc      4096 Mar  5 13:48 pilot3
[2026-03-05 13:52:28] -rw-r--r--. 1 boinc boinc       523 Mar  5 13:49 boinc_task_state.xml
[2026-03-05 13:52:28] -rw-------. 1 boinc boinc       977 Mar  5 13:49 memory_monitor_summary.json
[2026-03-05 13:52:28] -rw-------. 1 boinc boinc     21929 Mar  5 13:49 log.48955010._004869.job.log.tgz.1
[2026-03-05 13:52:28] -rw-------. 1 boinc boinc      7042 Mar  5 13:51 heartbeat.json
[2026-03-05 13:52:28] -rw-------. 1 boinc boinc        95 Mar  5 13:52 pilot_heartbeat.json
[2026-03-05 13:52:28] -rw-r--r--. 1 boinc boinc      8192 Mar  5 13:52 boinc_mmap_file
[2026-03-05 13:52:28] -rw-r--r--. 1 boinc boinc        22 Mar  5 13:52 wrapper_checkpoint.txt
[2026-03-05 13:52:28] -rw-------. 1 boinc boinc      4819 Mar  5 13:52 pilotlog.txt
[2026-03-05 13:52:28] -rw-------. 1 boinc boinc     87236 Mar  5 13:52 log.48955010._004869.job.log.1
[2026-03-05 13:52:28] -rw-------. 1 boinc boinc       188 Mar  5 13:52 output.list
[2026-03-05 13:52:28] -rw-r--r--. 1 boinc boinc       620 Mar  5 13:52 runtime_log
[2026-03-05 13:52:28] -rw-------. 1 boinc boinc    122880 Mar  5 13:52 result.tar.gz
[2026-03-05 13:52:28] -rw-r--r--. 1 boinc boinc      8635 Mar  5 13:52 runtime_log.err
[2026-03-05 13:52:28] -rw-------. 1 boinc boinc       644 Mar  5 13:52 9o8KDmLXLI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmAcNLDmlp4Lxm.diag
[2026-03-05 13:52:28] -rw-r--r--. 1 boinc boinc     21442 Mar  5 13:52 stderr.txt
[2026-03-05 13:52:28] No HITS result produced
[2026-03-05 13:52:28]  *** Contents of shared directory: ***
[2026-03-05 13:52:28] total 426176
[2026-03-05 13:52:28] -rw-r--r--. 2 boinc boinc 435659356 Mar  5 13:47 ATLAS.root_0
[2026-03-05 13:52:28] -rw-r--r--. 2 boinc boinc    597949 Mar  5 13:47 input.tar.gz
[2026-03-05 13:52:28] -rw-r--r--. 2 boinc boinc     15845 Mar  5 13:47 start_atlas.sh
[2026-03-05 13:52:28] -rw-------. 1 boinc boinc    122880 Mar  5 13:52 result.tar.gz
13:52:30 (1817535): run_atlas exited; CPU time 22.521080
13:52:30 (1817535): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN